EMLSAP00000010888, EMLSAP00000010888 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000010888
Unique NameEMLSAP00000010888
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length365
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001506Peptidase M12A, astacinPRINTSPR00480ASTACINcoord: 151..169
score: 46.49
coord: 170..187
score: 51.48
coord: 91..109
score: 37.54
IPR001506Peptidase M12A, astacinPFAMPF01400Astacincoord: 226..283
e-value: 1.9E-7
score: 30.5
coord: 69..199
e-value: 1.2E-30
score: 106.2
IPR003582ShKT domainSMARTSM00254ShKTcoord: 281..309
e-value: 8.5
score: 10.9
coord: 322..354
e-value: 0.57
score: 19.2
IPR003582ShKT domainPFAMPF01549ShKcoord: 283..308
e-value: 0.0054
score: 16.9
coord: 322..352
e-value: 1.9E-5
score: 24.8
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 276..308
score: 6.764
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 323..357
score: 9.489
IPR006026Peptidase, metallopeptidaseSMARTSM00235ZnMccoord: 66..208
e-value: 2.2E-29
score: 113.6
IPR024079Metallopeptidase, catalytic domainGENE3D3.40.390.10coord: 67..281
e-value: 3.3E-50
score: 170.1
NoneNo IPR availablePANTHERPTHR10127DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAININGcoord: 70..290
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 64..191
coord: 218..284
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000010888 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000010888EMLSAT00000010888-706735Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000010888 ID=EMLSAP00000010888|Name=EMLSAP00000010888|organism=Lepeophtheirus salmonis|type=polypeptide|length=365bp
MIHISDINTRVLLLNLIIICKMWNIYIVLFLLTVFEGAYSELSHAQCRII
HDKYSYEGMGSRNLLGGKVWPNNTVPYILAGGFSKDDLSLIQSAMDGIEK
KTCVRWVPRNGEKSYVYIKNDESGCFAVLGYNEYRGKHVLNLQRSNGFST
CMIFGIAQHEMLHILGYGHEQTRPDRDSYVRIHWDMIQRDAISNYFKSIY
DNTTIVPPQCRPRSTAXTFDDCYSGFTTDTFGYPYEYGSVMHYGLDDFQT
SDKNTMDVLRPVPFGIRIGQRIGMTELDALKFDTCGEYLSYCSDKMIADN
CPRSCQLCPGQGQTTTKKPDTNCVDSSSNCEGLKDFCYHSYLKENCKATC
GISYSVCFDLYIEYS
back to top
Add to Basket