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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 1..22 |
None | No IPR available | GENE3D | 3.40.50.300 | | coord: 209..437 e-value: 3.2E-87 score: 291.0 |
None | No IPR available | GENE3D | 3.40.50.300 | | coord: 438..600 e-value: 1.8E-44 score: 150.7 |
None | No IPR available | PANTHER | PTHR24031 | FAMILY NOT NAMED | coord: 35..727 |
None | No IPR available | PANTHER | PTHR24031:SF25 | SUBFAMILY NOT NAMED | coord: 35..727 |
IPR014001 | Helicase, superfamily 1/2, ATP-binding domain | SMART | SM00487 | DEXDc | coord: 241..447 e-value: 1.9E-63 score: 226.8 |
IPR014001 | Helicase, superfamily 1/2, ATP-binding domain | PROSITE | PS51192 | HELICASE_ATP_BIND_1 | coord: 253..432 score: 30.214 |
IPR001650 | Helicase, C-terminal | SMART | SM00490 | HELICc | coord: 485..566 e-value: 3.0E-27 score: 106.5 |
IPR001650 | Helicase, C-terminal | PFAM | PF00271 | Helicase_C | coord: 495..566 e-value: 3.3E-23 score: 81.2 |
IPR001650 | Helicase, C-terminal | PROSITE | PS51194 | HELICASE_CTER | coord: 443..605 score: 21.364 |
IPR011545 | DNA/RNA helicase, DEAD/DEAH box type, N-terminal | PFAM | PF00270 | DEAD | coord: 246..420 e-value: 1.9E-43 score: 147.7 |
IPR000629 | RNA helicase, ATP-dependent, DEAD-box, conserved site | PROSITE | PS00039 | DEAD_ATP_HELICASE | coord: 378..386 |
IPR014014 | RNA helicase, DEAD-box type, Q motif | PROSITE | PS51195 | Q_MOTIF | coord: 222..250 score: 10.553 |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 371..602 |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 210..435 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000011390 ID=EMLSAP00000011390|Name=EMLSAP00000011390|organism=Lepeophtheirus salmonis|type=polypeptide|length=894bp MQKRRERIEKWRAEKRKKELAAGPSKEVVEKSSTSAKMWSLEDDTDDEED ESMPKSSKDENAEPKAKEEEEEEEEEEEEEDDPLESYMKEVNKEVRKLKG VKGTKTEKGSGGVVIMTGVAKKRGAGGNAKRGELIEQNQDGLEYSSEDDE DNLDDAMSQLAKKGRKELTKIDHRDIAYQPFVKNFYREVPELTKMTSDEV EVYRLELEGIKVKGKNAPKPIKNWTHAGVSQRILDLLKRNGYEKPTPIQT QAIPIIMSGRDMIGIAKTGSGKTLAFLLPLFRHIMAQPELEEGDGPIAII MTPTRELCMQIGKEIKKFSKAIKGARSVCVYGGTGISEQIAELKRGAEII VCTPGRMIDMLAANSGRVTNCRRITYVVLDEADRMFDMGFEPQVSRIIDN CRPDKQMVMFSATFPRQMEALARRILCKPVEVTVGGRSVVCKDIDQSVYV LEEEHKFLKLLELLGQRSSEGLIIIFVDKQEHADSLLKDLMSASYTSCAS LHGGVDQYDRDSIITNFKNGKVKILVATSVAARGLDVKELVLVVNYDCPN HYEDYVHRCGRTGRAGNSGFAATFLTPEQGRYAGEVIKAMELSDAVVPAP LKDLWEKYKIKSALEGKVIKTGSGGFGGSGFKFDETEATYTTEKKKFQKA AFGLQDSDDEDVEQEIEQQIEQLLNPKRTVKNVSASGATTTGIVMGVQIA GGVDIKSGXGASXGAADKLELAKRLASKINLKANAKNGSDTSNTTSSFMM GTQSKPIITAKTVADHIASKINAKLNYQPSEDASPAEGTAFKKYEEELVI NDFPQQARWKVASKEALAQISEYSDAGITVRGTYFPTGKPIPEGERKLFL AIESTSELSVQKAKVEITRLLKEELLKIQTSGIQHINKGRYKVL back to top
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