EMLSAP00000011448, EMLSAP00000011448 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000011448
Unique NameEMLSAP00000011448
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length264
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPRINTSPR00261LDLRECEPTORcoord: 128..149
score: 48.45
coord: 232..253
score: 49.22
coord: 39..60
score: 48.67
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSMARTSM00192LDLacoord: 115..156
e-value: 2.3E-6
score: 37.1
coord: 27..65
e-value: 7.9E-12
score: 55.3
coord: 222..260
e-value: 1.2E-7
score: 41.4
IPR002172Low-density lipoprotein (LDL) receptor class A repeatGENE3D4.10.400.10coord: 26..63
e-value: 3.1E-12
score: 45.7
IPR002172Low-density lipoprotein (LDL) receptor class A repeatGENE3D4.10.400.10coord: 222..259
e-value: 7.0E-11
score: 41.2
coord: 114..154
e-value: 8.4E-8
score: 31.3
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPFAMPF00057Ldl_recept_acoord: 27..63
e-value: 4.3E-9
score: 35.9
coord: 115..149
e-value: 1.2E-5
score: 24.9
coord: 223..258
e-value: 2.1E-7
score: 30.5
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 222..259
score: 11.988
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 27..64
score: 12.688
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 115..155
score: 10.925
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSUPERFAMILY57424LDL receptor-like modulecoord: 116..154
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSUPERFAMILY57424LDL receptor-like modulecoord: 27..63
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSUPERFAMILY57424LDL receptor-like modulecoord: 217..256
NoneNo IPR availablePANTHERPTHR10529LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDcoord: 28..253
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.609
IPR023415Low-density lipoprotein (LDL) receptor class A, conserved sitePROSITEPS01209LDLRA_1coord: 234..258
IPR023415Low-density lipoprotein (LDL) receptor class A, conserved sitePROSITEPS01209LDLRA_1coord: 41..63
IPR023415Low-density lipoprotein (LDL) receptor class A, conserved sitePROSITEPS01209LDLRA_1coord: 130..154

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000011448 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000011448EMLSAT00000011448-707295Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000011448 ID=EMLSAP00000011448|Name=EMLSAP00000011448|organism=Lepeophtheirus salmonis|type=polypeptide|length=264bp
MLISFGRLFIVFNCILIQERIISASTTCNSDNEFKCHNGICIPKYHVCDG
ISHCRDSSDENFCLQEKRSRSDNEGVVSIIASFRDSFRNFVRDIMKEVGT
LLRRKKSDGGAETVECKSNDAFFCSVDNICISLSARCDTKDDCSDGEDEN
PNICDFLGGSSLRRSTNKKSIQENGEKLVPLPDIVTLGKSRRTMSVIPRL
SSDNSKSSSFSSSHETRTVKVICNSRQFACDNTCIPLSWVCDDLEDCIDK
TDENQEKCKSKKEK
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