EMLSAP00000011472, EMLSAP00000011472 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000011472
Unique NameEMLSAP00000011472
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length638
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 205..228
score: 22.07
coord: 541..565
score: 33.26
coord: 75..96
score: 35.41
coord: 120..142
score: 35.62
coord: 156..177
score: 24.43
coord: 581..607
score: 31.8
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 57..599
e-value: 7.2E-70
score: 234.9
IPR000276G protein-coupled receptor, rhodopsin-likePROSITEPS00237G_PROTEIN_RECEP_F1_1coord: 126..142
IPR000995Muscarinic acetylcholine receptor familyPRINTSPR00243MUSCARINICRcoord: 571..589
score: 25.4
coord: 121..130
score: 56.09
coord: 140..154
score: 44.64
coord: 602..616
score: 41.16
NoneNo IPR availableGENE3D1.20.1070.10coord: 520..626
e-value: 4.3E-95
score: 317.7
coord: 41..241
e-value: 4.3E-95
score: 317.7
NoneNo IPR availablePANTHERPTHR24249HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTORcoord: 1..625
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 40..235
coord: 530..622
NoneNo IPR availableTMHMMTMhelixcoord: 157..179
NoneNo IPR availableTMHMMTMhelixcoord: 546..568
NoneNo IPR availableTMHMMTMhelixcoord: 34..56
NoneNo IPR availableTMHMMTMhelixcoord: 206..228
NoneNo IPR availableTMHMMTMhelixcoord: 583..602
NoneNo IPR availableTMHMMTMhelixcoord: 114..136
NoneNo IPR availableTMHMMTMhelixcoord: 77..99
IPR000921Histamine H1 receptorPANTHERPTHR24249:SF56HISTAMINE H1 RECEPTORcoord: 1..625
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 57..599
score: 40.894

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000011472 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000011472EMLSAT00000011472-707319Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000011472 ID=EMLSAP00000011472|Name=EMLSAP00000011472|organism=Lepeophtheirus salmonis|type=polypeptide|length=638bp
MSTNEIQLTMNVSSSLNENMSEIGSSVLHDEAAFATLSTLIPTGFGLYIF
SFTTFVGNAMVLHAIRTEKRLQTVSNMFIMSLASADLTVGLIVMPISSAY
ALTGDWKFGYVVCQFWLVIDYTASTASIFNLCILSLDRYWSISTPLQYLR
KRTKKRALIMIGLAWLASAMWFIPVLGWHHILYNGKRQQPEGVCDTEFAT
NITFKVVTSILNFYIPVIMMIVINVRIFLAIRRRSEDIERLGATTSGMAQ
SSTPITTNIVAAMQDDMTCDSLTEHDHVESNYCQGPQNNLLSKKKKKKKR
RHHTCSRLNKSSKKSDRPRNNFVNSSVVEFHKLSVMTVKSKNGQPLIQKP
SSSHYRDSEVLTVFEGVTVNVEYVNNASSSNNQDAEDSSKKNKADKSTTA
VKTCHNSANLSVHINHKLDHSNHRQCYRSSRKCLPTSSTNRINNKNNSKT
SSTVVNSNNNLLINGVSATPSSSFSDEDEQDVSVRINTSVDQGNGWIRTL
FCPNGGGSGKQRSDLFLQPQCSTSNLTPANPKTVLAKEKKAATQLGVIVG
AFILCWLPYFTLFMVVAYCGEANQCVSSTVHTVTIWFGYFNSTLNPILYP
LCNRNFKRAFKRMLRFSSPPTVSSQPQNQFSYLITNKI
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