EMLSAP00000011499, EMLSAP00000011499 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000011499
Unique NameEMLSAP00000011499
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length689
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin, type 1 repeatSMARTSM00209TSP1coord: 262..339
e-value: 7.8E-7
score: 38.7
coord: 345..394
e-value: 7.6E-4
score: 28.8
coord: 175..223
e-value: 3.8E-6
score: 36.4
IPR000884Thrombospondin, type 1 repeatPFAMPF00090TSP_1coord: 262..304
e-value: 0.051
score: 13.5
coord: 346..372
e-value: 2.5E-6
score: 27.3
coord: 176..222
e-value: 3.0E-5
score: 23.9
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 259..339
score: 10.955
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 172..223
score: 10.881
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 342..397
score: 9.027
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 341..378
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 171..222
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 258..302
NoneNo IPR availableGENE3D2.20.100.10coord: 258..306
e-value: 5.5E-11
score: 42.0
coord: 172..222
e-value: 1.1E-7
score: 31.5
coord: 341..374
e-value: 2.8E-9
score: 36.6
NoneNo IPR availablePANTHERPTHR19897:SF72HEMICENTIN-1coord: 175..367
NoneNo IPR availablePANTHERPTHR19897COILED-COIL DOMAIN-CONTAINING PROTEINcoord: 175..367
NoneNo IPR availableSIGNALP_GRAM_NEGATIVESignalP-noTMSignalP-noTMcoord: 1..26
score: 0.58
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.851

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000011499 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000011499EMLSAT00000011499-707346Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000011499 ID=EMLSAP00000011499|Name=EMLSAP00000011499|organism=Lepeophtheirus salmonis|type=polypeptide|length=689bp
MTEKKRNHLHWTSLLLCLFALNLSHGLSNESITTTESXPSRSTVKPLPIA
IRAPEPDDAEAKMKKPXKTKNLLCPSYKVHRRGDSKFSCYANFTVNSCGH
NMVISMEAWTTSSQLYEPFLNVGINCSLEINSTTHLFPAPNPVFEILGTN
DTDGTKDSSPKFSAIIQNSSISCRWSKWSSWSHCSVSCGNSPGRRXRSRS
QNGSRLCSGTENESKKCIVNRCAQDCKKKVLLPHLYGGKPCIGDDLETKR
CSGADCPVDGDWSQWSHXGXCQSKCGVGNRTRTRACDNPPPENGGRPCEE
NNSNVRDELIRHPRIAEKSEDLPIQTQEEVQSCKLKDCDPIDGRWSKWSR
WSTCSVNCGRGKIIRTRAYKGQGPIPHSVDITSVLFQRLGGSCLDKPPYV
HGFIGPFIKEGITINRPDRYLRVGEIAYYMCNHGKVIDPISNQRGFFVAC
RESNGYLVKMYRRKDSDPEWPICKDPRYCLDPAPKYQGYTPPIPRRHALV
NTQIKYHCIKRPNVTYSLSCFPDGRYKLPNEVPLNTCEQNYNPPGSSXQX
PALSSQSTRNGNILRFMXANTVSPSYEGYLLSLDDASDNEDKDSVLNQTF
GWIQSPGYPGVTAANYSQFKFTVLTHGYYVRIGIEDAEVQYDQMDLDIDF
KDQQKQLRKGESYIIKRQFVIXPAYGVFKFRITFQFIAP
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