EMLSAP00000011844, EMLSAP00000011844 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000011844
Unique NameEMLSAP00000011844
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length883
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 485..499
score: 33.98
coord: 36..50
score: 37.61
coord: 316..330
score: 39.85
IPR001680WD40 repeatSMARTSM00320WD40coord: 646..693
e-value: 8.9
score: 11.0
coord: 245..287
e-value: 2.8E-6
score: 36.9
coord: 188..236
e-value: 0.028
score: 23.6
coord: 602..643
e-value: 1.7E-7
score: 40.9
coord: 58..97
e-value: 0.013
score: 24.7
coord: 144..183
e-value: 4.9E-5
score: 32.7
coord: 462..498
e-value: 1.3
score: 16.2
coord: 7..49
e-value: 8.7E-7
score: 38.5
coord: 501..543
e-value: 12.0
score: 10.1
coord: 100..141
e-value: 3.1E-5
score: 33.4
coord: 290..329
e-value: 1.1E-7
score: 41.6
coord: 419..455
e-value: 24.0
score: 8.3
coord: 552..597
e-value: 0.035
score: 23.2
coord: 368..406
e-value: 3.4E-4
score: 30.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 605..643
e-value: 1.7E-7
score: 30.7
coord: 472..498
e-value: 0.0067
score: 16.1
coord: 292..329
e-value: 9.7E-8
score: 31.5
coord: 68..93
e-value: 1.0E-4
score: 21.9
coord: 556..597
e-value: 1.4E-4
score: 21.4
coord: 194..236
e-value: 4.0E-4
score: 20.0
coord: 112..141
e-value: 4.4E-6
score: 26.2
coord: 258..287
e-value: 0.0088
score: 15.7
coord: 150..183
e-value: 2.9E-4
score: 20.5
coord: 16..49
e-value: 1.9E-5
score: 24.2
coord: 372..405
e-value: 2.8E-4
score: 20.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 65..106
score: 9.807
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 15..49
score: 9.94
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 297..338
score: 12.681
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 609..643
score: 12.246
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 121..150
score: 11.043
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 151..183
score: 9.539
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 484..507
score: 9.506
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 375..415
score: 9.506
IPR003613U box domainSMARTSM00504Uboxcoord: 816..879
e-value: 4.2E-15
score: 66.2
IPR003613U box domainPFAMPF04564U-boxcoord: 813..882
e-value: 5.5E-15
score: 54.9
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 535..705
e-value: 8.0E-27
score: 93.0
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 232..331
e-value: 6.7E-50
score: 169.2
coord: 7..231
e-value: 6.1E-45
score: 152.8
coord: 368..534
e-value: 6.7E-50
score: 169.2
IPR013761Sterile alpha motif/pointed domainGENE3D1.10.150.50coord: 706..760
e-value: 5.0E-6
score: 25.5
IPR013761Sterile alpha motif/pointed domainSUPERFAMILY47769SAM/Pointed domaincoord: 703..764
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 811..882
e-value: 3.8E-17
score: 61.4
NoneNo IPR availablePANTHERPTHR22847WD40 REPEAT PROTEINcoord: 18..672
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 809..882
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 630..644
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 316..330
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 274..288
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 170..184
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 485..499
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 128..142
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 15..702
score: 53.916
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 369..421
coord: 64..332
coord: 467..502
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 377..693
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 714..785
score: 11.108

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000011844 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000011844EMLSAT00000011844-707691Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000011844 ID=EMLSAP00000011844|Name=EMLSAP00000011844|organism=Lepeophtheirus salmonis|type=polypeptide|length=883bp
MAASFNDIQVVQVLSGVHQSDINSVDVSSFGKEDLLVTGSSDQTVRLWKR
LGQDSLFLESDSKLLVRHNYSVNEVRFSPQGTMVASGSTDGTAIITEPRT
AQKLFTFVQPTTHSAIRVCRFSPDSSRLITTGDDETICIWDIRSRSLSLT
IKYHEATIFAADFTSDSCYLISCDANGVICLWDCDSQNERPLVVVKEAHD
LGVLSCDFAPLRNDEYLSNAYTLATGGNDDVIRLWKIYTGLKKHKIELIH
TLSGHPGACVMSLRFSPIKGSNLLISTGGDKLARLWDTSGNKCIAVLNHH
TRYVTSSVFLRHGQFLITGSNDRTAVIWDLNIDNSTTVLDQDYISCEKSI
NRRNEEIYQLLMNNEFLEATLEASLSGHHSDINNLIFISQNQLISCSSDK
TVRHWYLSSSPDFSMLIKSTELNQTCKTDKLIYDVDFCHSSKILVSGDGK
IRHMSEEIEIIGSLPVEELFGVIRSCRITLDCKFVLSGGDDDRIYVWDVE
SLQKIESYEGHEGTIFFIDFVPFKDGVYRIVSGCAMGELKYWIFNPYGDQ
KSQTLTYVEEAHDLGVNCGAFRHQNESKCEEYYLATGGNDCLIKIWKVDN
AHIQPHKSLSGHGGVIMSVSFSKGDSRQLMVSTSGDKTVRLWDGFDFQVL
RVLETQCRYVPCSAFSQPLFELDGSKYMYLATGSNDEFISLWKLSGSLVD
ENIQSFHHTDMKKWSISDVSVWINSLKIKGFNSHIFSESFESLRLDGAQL
AHLTREDLLSKFPETFSEPSAAENVFQTIQWRRNKISNPLSEPTAPSYSK
VFPPSLVNDETEIPSDLICPITHEIMIHPVSCSDGFVYEKTAIEEWLISR
KRTSPMTNLIIHDVSLTFNRQIHRKIQDFLSKD
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