EMLSAP00000011939, EMLSAP00000011939 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000011939
Unique NameEMLSAP00000011939
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length418
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001392Clathrin adaptor, mu subunitPRINTSPR00314CLATHRINADPTcoord: 100..127
score: 55.52
coord: 12..32
score: 18.61
coord: 300..315
score: 26.7
coord: 229..256
score: 53.9
IPR001392Clathrin adaptor, mu subunitPIRSFPIRSF005992AP_complex_mucoord: 1..418
e-value: 4.6E-151
score: 511.0
NoneNo IPR availableGENE3D2.60.40.1170coord: 166..316
e-value: 1.2E-47
score: 161.4
NoneNo IPR availableGENE3D3.30.450.60coord: 1..141
e-value: 4.2E-39
score: 133.1
NoneNo IPR availablePANTHERPTHR11998CLATHRIN COAT ASSEMBLY PROTEINcoord: 1..418
IPR022775AP complex, mu/sigma subunitPFAMPF01217Clat_adaptor_scoord: 1..129
e-value: 7.0E-7
score: 28.9
IPR008968Clathrin adaptor, mu subunit, C-terminalPFAMPF00928Adap_comp_subcoord: 166..418
e-value: 1.0E-72
score: 244.2
IPR018240Clathrin adaptor, mu subunit, conserved sitePROSITEPS00991CLAT_ADAPTOR_M_2coord: 249..263
IPR028565Mu homology domainPROSITEPS51072MHDcoord: 177..417
score: 37.314
IPR028565Mu homology domainSUPERFAMILY49447Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptorcoord: 166..417
IPR011012Longin-like domainSUPERFAMILY64356SNARE-likecoord: 1..141

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000011939 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000011939EMLSAT00000011939-707786Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000011939 ID=EMLSAP00000011939|Name=EMLSAP00000011939|organism=Lepeophtheirus salmonis|type=polypeptide|length=418bp
MIHSLFIINPSGDIFMEKHWQSVVSRSVCDYFFDAQNKASSDQDIPPVIA
TPHHXLIHISRSNVFFVAXCXXEVPPLFVVEFLHRVVDTLGDYFSGDSSE
SVIKENYVLVYELLDEMLDNGFPLATESNILKELIKPPNILRTVVNTVTG
KSNMSETLPTGQLSNVPWRRSSVKYTNNEAYFDVIEEVDAIIDKSGATVS
AEIHGYIDCVVKLSGMPDLTMSFMNPRMFDDTSFHPCVRYKRWDSEKILS
FIPPDGNFRLMSYLVGSQSVVAIPIYVRHQLNFSSAGHGKLDITVGPKQT
MGRNLESVKIEIPMPKSVLNCSLIATQGKYAFDPVNHALTWDIGKIDSAK
LPNIRGTVSLQTGAMSPDCNPTMNVSFTINQMAVSGLKVSRLDLYGEKYK
PFKGVKYITKAGRFQVRM
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