EMLSAP00000012053, EMLSAP00000012053 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000012053
Unique NameEMLSAP00000012053
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length474
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002081Cryptochrome/DNA photolyase, class 1PRINTSPR00147DNAPHOTLYASEcoord: 338..356
score: 65.13
coord: 140..156
score: 30.15
coord: 318..334
score: 67.65
coord: 377..391
score: 43.33
IPR005101DNA photolyase, FAD-binding/Cryptochrome, C-terminalPFAMPF03441FAD_binding_7coord: 204..470
e-value: 7.6E-106
score: 353.2
IPR005101DNA photolyase, FAD-binding/Cryptochrome, C-terminalSUPERFAMILY48173Cryptochrome/photolyase FAD-binding domaincoord: 188..471
NoneNo IPR availableGENE3D1.25.40.80coord: 143..279
e-value: 6.3E-32
score: 110.5
NoneNo IPR availableGENE3D1.10.579.10coord: 280..471
e-value: 6.1E-75
score: 250.0
NoneNo IPR availablePANTHERPTHR11455:SF0SUBFAMILY NOT NAMEDcoord: 1..470
NoneNo IPR availablePANTHERPTHR11455CRYPTOCHROMEcoord: 1..470
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 3..142
e-value: 2.1E-36
score: 124.8
IPR006050DNA photolyase, N-terminalPFAMPF00875DNA_photolyasecoord: 4..160
e-value: 4.8E-38
score: 130.3
IPR006050DNA photolyase, N-terminalPROSITEPS51645PHR_CRY_ALPHA_BETAcoord: 2..131
score: 30.002
IPR006050DNA photolyase, N-terminalSUPERFAMILY52425Cryptochrome/photolyase, N-terminal domaincoord: 4..169
IPR018394Cryptochrome/DNA photolyase, class 1 conserved site, C-terminalPROSITEPS00394DNA_PHOTOLYASES_1_1coord: 318..330

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000012053 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000012053EMLSAT00000012053-707900Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000012053 ID=EMLSAP00000012053|Name=EMLSAP00000012053|organism=Lepeophtheirus salmonis|type=polypeptide|length=474bp
MPNSIFWFRRDLRLGDNPGLVEAAKLGKVLCVYIFEDRKQNAADFSELGS
GTKAWLHYALDXLNKTLGGKLFLARGSPLDVLKDVAQKASSKNVFCNHIY
EPMEMEMESHIIKELKSSAGIXLRSFNSXLLREPQNILQQNGKPYKIFTH
FYKKGCLNYGEPRSPLAEPSNLNLLQLNDTLTLEDLQLLSKDSPNLTVNE
WNISEKGANERLEGFLQSGLDNYKIGRDFPSQHHVSRLSPYLRFGQISPN
IIWYAARKVGTPGPDLDHFSSELGWREFSVYLLHHWPHIPRESFNPNFKG
FPWKDDEKALAAWKEGRTGVPIVDAGMRELLQTGYMHNRLRMIVASYLVK
NLMIHWHRGEDWFWDKLLDADLASNSASWQWVVGCGADAAPYFRIFNPIL
QSEKFDPEGVFIRKYVPELTNVPTKHLFAPWEATDTVMKNAGVIMGKTYP
RPLVDFKKSRQAAQDAFDKMNNKG
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