EMLSAP00000012596, EMLSAP00000012596 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000012596
Unique NameEMLSAP00000012596
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length947
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001494Importin-beta, N-terminal domainSMARTSM00913IBN_Ncoord: 31..99
e-value: 3.3E-5
score: 33.3
IPR001494Importin-beta, N-terminal domainPFAMPF03810IBN_Ncoord: 32..98
e-value: 2.5E-11
score: 43.2
IPR001494Importin-beta, N-terminal domainPROSITEPS50166IMPORTIN_B_NTcoord: 31..99
score: 9.328
NoneNo IPR availablePFAMPF13513HEAT_EZcoord: 404..457
e-value: 3.0E-10
score: 40.1
NoneNo IPR availablePANTHERPTHR10527IMPORTIN BETAcoord: 2..883
NoneNo IPR availablePANTHERPTHR10527:SF17TRANSPORTIN-2 (KARYOPHERIN BETA-2B)coord: 2..883
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 475..796
e-value: 4.1E-69
score: 233.0
coord: 12..474
e-value: 6.8E-134
score: 446.5
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1..866

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000012596 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000012596EMLSAT00000012596-708443Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000012596 ID=EMLSAP00000012596|Name=EMLSAP00000012596|organism=Lepeophtheirus salmonis|type=polypeptide|length=947bp
MDWQPDPAGLNQILSXLRESQSPDTSVQRSVQKKLEELNGYPDFNSYLIF
VLTKLGNEDEATRSLSGLILKNNVKVHLNSFPKEVTDFIKTECLNAVGDP
SPLIRATVGILITTIASRGDLSQWPDLLPTLCQMLDSPDYNSCEGAFGAL
LKICEDLGELLDSEELNRPLNILIPKFLQFFKHTSPKIRSHAIGCVNQFI
IGRVQALMVHIDAFIENLFSLADDSDPIVRKNICRAIVMLLEVRMDRLIP
HMNNIIDYMLQRTQDSDEGVSLEACEFWLSLADESVCREALLPHLDKLIP
VLVRGMKYSEIDIILLRGDVEEDEMIPDREEDIRPRFHRSRSHHSGGNED
EEDDGSLDNDEDLSDWNLRKCSAAALDVLASVFRXELLPVLLPILKETLF
HQEWEIKESGILALGAIAEGCMSGMIPHLHELIPYLINCLSDKKALVRSI
TCWTLSRYSHWVVNQPHESYLKPLMSELLKRVLDSNKRVQEAACSAFATL
EEEACTELVPYLGFILETLVFAFQKYQHKNLLILYDAIGTLADSVGHHLN
KSEYINLLMPPLIEKWNALKDEDKDLFPLLECLSSVATALQEGFLPYCEP
VYRRCVSLVXQTLNQHMAYMQNPNHLDQADKDFMIVALDLLSGLAEGLDT
HIESLVASSNIMQLLYQCIQDCMPEVRQSSFALLGDLTKACFIHSVSPCI
PNFMPILARNLFTDHIXVXNNATWAAGEISVKLGADMKPYIPMLLEPLVN
IINRPNTPKTLLENTAITIGRMGFVCPHEVAPSLNEFVRPWCTSLRNIRD
NDEKDSAFRGMCQMISVNPGGVASDFIFFCDAVASWQNPHPDLKDMFQKI
LQGFKTQVGTEAWDRFSVQFPSPLKERLTANYGRNVKFCEFSYVCSKQQT
LALHAKEKKCPNKRTTGDEIRNIIFFPCGVFKVARYVSVFKLFTPSF
back to top
Add to Basket