EMLSAP00000012711, EMLSAP00000012711 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000012711
Unique NameEMLSAP00000012711
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length989
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000157Toll/interleukin-1 receptor homology (TIR) domainSMARTSM00255TIRcoord: 859..981
e-value: 0.0023
score: 16.2
IPR000157Toll/interleukin-1 receptor homology (TIR) domainPFAMPF01582TIRcoord: 862..925
e-value: 1.6E-15
score: 56.6
IPR000157Toll/interleukin-1 receptor homology (TIR) domainPROSITEPS50104TIRcoord: 858..925
score: 18.655
IPR000157Toll/interleukin-1 receptor homology (TIR) domainSUPERFAMILY52200Toll/Interleukin receptor TIR domaincoord: 856..926
NoneNo IPR availableGENE3D3.80.10.10coord: 581..740
e-value: 2.2E-23
score: 81.7
NoneNo IPR availablePFAMPF13855LRR_8coord: 593..651
e-value: 3.2E-10
score: 39.4
coord: 677..735
e-value: 1.2E-8
score: 34.4
NoneNo IPR availableGENE3D3.40.50.10140coord: 855..926
e-value: 3.4E-26
score: 91.1
NoneNo IPR availableGENE3D3.80.10.10coord: 371..568
e-value: 3.7E-12
score: 44.8
NoneNo IPR availablePANTHERPTHR24365TOLL-LIKE RECEPTORcoord: 377..925
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 374..496
coord: 273..345
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 460..754
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 379..401
score: 4.701
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 641..663
score: 4.832
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 406..427
score: 4.678
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 617..638
score: 5.864
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 678..699
score: 7.881
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 538..559
score: 5.648
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 702..723
score: 5.048

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000012711 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000012711EMLSAT00000012711-708558Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000012711 ID=EMLSAP00000012711|Name=EMLSAP00000012711|organism=Lepeophtheirus salmonis|type=polypeptide|length=989bp
MQNGSINESXTKHRIKEPILRSSGDLLSAFTIKNIYRNNDEESKQKKVLH
KESSVRFNENENEEIILPRKFTIHQPIKSNTTPSVEKSSLLLEGGRILSA
GLYHSKHDRHRRLKAIDSPFKNESKKVFSEPKNGVSNKKSFSFLGEGFGF
LGDFKNTSVIGTKTESYSSSILDPNSTSKTRGVKKQIHLCTEKIMPSSVN
FYIVSTLLYIESINCQYHYTDNFVDHENSSMDKFSADIAPLNIRGPNSTC
DVAYLLQIPVCFTRELIQPPSMSYIPPKNCRYFENNEKIMICENEISNPF
TWTHSELHFLQLENHFTLKKLPNISNIHTRYLRIYAETLELINGGENSDR
IIGLEIYGGKFSHGTAYVQPSIKQPILLQLEYLSLMDNRNLGALHNKIFY
PLRYSPLVELNLRNCHIKIIGTKVFKYLKGLNHLDLRGNKALFTLGAKYP
FWITLHLFIKNIKILGLSDLGLLLVPQYILHQLQTSRVEVLNLSNNIYFH
FGYFLNKSVKLPHLRVMIIDNSEVISIRNYTFLHLGSSLKAISLRKNHLN
KLWPGFLLPTLEFLDLSYQREVSGQNPKFVIEPNIFKENPMTKLKVLRLR
GLKTDIIHRYTFEGLYNLEELDLSDSIVQTIEEGSFIELKSLKKLHLSNC
KNLKDLNGGHDNSIDDQMYVRMWSYFPNLKTLDLSHNRLIPWEKPIFLRN
KKLHTLFLRQCAITHISTSMLKDFSKLSFLDMSDNLRLTCGFDVIHFHNL
TLHRSGLNVFEYENGSGIFCHFPRNHTIRYVSFKNLFENFKDFFPPHIEG
NAXTITWLNKLLFTLLIISLSSLTIGIRYVYSNRYYISYHWMTSKMNYDE
NKNNNRSYTYDAFISYSDKDREWVFSELIPHLEEDFNVCVHERDFKVGMM
VVDNIVSCIDKSRKFIAVLSPSFVNRIIKFHLFYAFVDPKNNEVSEREGE
CCLELYLDIIVVFCGVNISRLNNVVVDCEWKREEEVFFD
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