EMLSAP00000012858, EMLSAP00000012858 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000012858
Unique NameEMLSAP00000012858
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length342
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 119..140
NoneNo IPR availableGENE3D3.40.50.300coord: 12..172
e-value: 2.1E-63
score: 212.8
NoneNo IPR availableGENE3D1.20.272.10coord: 237..335
e-value: 5.2E-29
score: 99.5
NoneNo IPR availableGENE3D1.10.8.60coord: 174..236
e-value: 8.6E-22
score: 75.8
NoneNo IPR availablePANTHERPTHR11669REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNITcoord: 4..342
IPR003593AAA+ ATPase domainSMARTSM00382AAAcoord: 43..175
e-value: 7.2E-12
score: 55.4
IPR013748Replication factor C, C-terminal domainPFAMPF08542Rep_fac_Ccoord: 236..325
e-value: 2.4E-15
score: 56.1
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 47..170
e-value: 4.6E-16
score: 59.1
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalSUPERFAMILY48019post-AAA+ oligomerization domain-likecoord: 237..330
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 10..230

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000012858 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000012858EMLSAT00000012858-708705Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000012858 ID=EMLSAP00000012858|Name=EMLSAP00000012858|organism=Lepeophtheirus salmonis|type=polypeptide|length=342bp
MVVSTDKPLNLPWVEKYRPKNLSELVSHEDIIGTIRRFVKEKRTPHLLFY
GPPGTGKTSAILAAAREIYSEGGMNSAVLELNASDDRGIDVVRGRILNFA
STKMVNFSGTNVPFKLIILDEADAMTQDAQNALRRIIEKFTENVRFCLIG
NYLSKIIPALQSRCTRFRFAPLQSEQIIPRLRDIVEKESLELTPDGEKAL
LALAHGDMRRILNILQSCSMAFPVVNEANIYACTGHPLPSDITKALESLL
NDXLSEXYHKIQNELQTNKGLSLIDILTELHLLVHRLEIPNKVKVYLLIK
MAXAEHRMLSGXSEKMQLGSIVGAFRIAREMIANETDAQLVA
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