EMLSAP00000012899, EMLSAP00000012899 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000012899
Unique NameEMLSAP00000012899
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length546
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)PRINTSPR00304TCOMPLEXTCP1coord: 408..420
score: 40.51
coord: 41..57
score: 28.85
coord: 93..112
score: 36.63
coord: 374..396
score: 26.82
coord: 63..81
score: 36.65
IPR002423Chaperonin Cpn60/TCP-1PFAMPF00118Cpn60_TCP1coord: 41..529
e-value: 3.1E-135
score: 451.4
IPR002423Chaperonin Cpn60/TCP-1PANTHERPTHR11353CHAPERONINcoord: 1..545
IPR002423Chaperonin Cpn60/TCP-1SUPERFAMILY48592GroEL equatorial domain-likecoord: 26..150
coord: 406..527
IPR027409GroEL-like apical domainGENE3D3.50.7.10coord: 217..374
e-value: 5.5E-40
score: 136.8
IPR027409GroEL-like apical domainSUPERFAMILY52029GroEL apical domain-likecoord: 214..379
IPR027410TCP-1-like chaperonin intermediate domainGENE3D3.30.260.10coord: 375..404
e-value: 6.3E-17
score: 60.8
coord: 157..216
e-value: 6.3E-17
score: 60.8
IPR027413GroEL-like equatorial domainGENE3D1.10.560.10coord: 14..147
e-value: 6.8E-79
score: 264.1
coord: 405..528
e-value: 6.8E-79
score: 264.1
IPR012721T-complex protein 1, theta subunitTIGRFAMTIGR02346TIGR02346coord: 11..536
e-value: 8.1E-231
score: 764.8
NoneNo IPR availableSUPERFAMILY54849GroEL-intermediate domain likecoord: 372..406
coord: 158..220

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000012899 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000012899EMLSAT00000012899-708746Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000012899 ID=EMLSAP00000012899|Name=EMLSAP00000012899|organism=Lepeophtheirus salmonis|type=polypeptide|length=546bp
MALHVPKAPGFSSMMKDGARFLSGLEEAVINNISACKEFTSTLGSAYGPN
GMNKMVINHLEKLFVTNDAGTIMRELEVEHPAVKIMVLASQMMEQEVGDG
TNFVVVFCGALLKEAEDLLRMGLKPTEVAEGYELALEKAIEILETLSNLS
INNNRSAQEVQKAICASVMSKQYGYQDFLSELITKACISILPEETSFNVD
NIRVCKILGSGLLQSQVLPGMVFLRAVESNIINVKDAKIAIYTCPVDQTQ
TETKGTVLIKTAQELKDFSKGEEDLLEGQIKAIKDAGIDVIVSGGKIGDL
AMHYINKYDIMAIRLTSKWDVRRLCRTVGATPLPKMTAPTKEEMGFADKV
YVDELGDTSVVIFKLESKESRVATVVVRGSTENYMDDIERAIDDGVNTFK
GLCREPRLVPGAGATEIALSIKIGDYAKTCPGLDQYAINRFSLALQSIPR
ILAENSGLKSSEMIAQLLSAHQEGNSNAGVDIDAPNAAVVNTAEKEIYDL
LLTKFWGIKYATDAACTILRVDQMIMAKRAGGPKARGGGAMDQDDD
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