EMLSAP00000013004, EMLSAP00000013004 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000013004
Unique NameEMLSAP00000013004
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length753
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003070Orphan nuclear receptorPRINTSPR01284NUCLEARECPTRcoord: 506..522
score: 60.96
coord: 606..626
score: 54.98
coord: 627..642
score: 43.75
coord: 481..496
score: 100.0
coord: 676..693
score: 57.58
coord: 730..751
score: 49.17
coord: 709..729
score: 60.17
IPR001723Steroid hormone receptorPRINTSPR00398STRDHORMONERcoord: 648..663
score: 28.28
coord: 709..726
score: 34.12
coord: 582..598
score: 32.81
coord: 470..480
score: 54.26
coord: 561..582
score: 24.85
IPR001628Zinc finger, nuclear hormone receptor-typePRINTSPR00047STROIDFINGERcoord: 466..474
score: 65.24
coord: 409..425
score: 51.38
coord: 425..440
score: 64.08
coord: 458..466
score: 62.59
IPR001628Zinc finger, nuclear hormone receptor-typeSMARTSM00399ZnF_C4coord: 406..477
e-value: 7.6E-39
score: 145.0
IPR001628Zinc finger, nuclear hormone receptor-typePFAMPF00105zf-C4coord: 408..476
e-value: 1.0E-30
score: 105.6
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS00031NUCLEAR_REC_DBD_1coord: 409..435
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS51030NUCLEAR_REC_DBD_2coord: 406..481
score: 19.89
IPR000536Nuclear hormone receptor, ligand-binding, coreSMARTSM00430HOLIcoord: 560..721
e-value: 2.1E-25
score: 100.4
IPR000536Nuclear hormone receptor, ligand-binding, corePFAMPF00104Hormone_recepcoord: 553..730
e-value: 3.8E-22
score: 78.2
IPR008946Nuclear hormone receptor, ligand-bindingGENE3D1.10.565.10coord: 471..749
e-value: 1.1E-65
score: 221.2
IPR008946Nuclear hormone receptor, ligand-bindingSUPERFAMILY48508Nuclear receptor ligand-binding domaincoord: 480..750
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 408..470
e-value: 1.4E-30
score: 104.9
NoneNo IPR availablePANTHERPTHR24085NUCLEAR HORMONE RECEPTORcoord: 266..753
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 407..485

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000013004 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000013004EMLSAT00000013004-708851Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000013004 ID=EMLSAP00000013004|Name=EMLSAP00000013004|organism=Lepeophtheirus salmonis|type=polypeptide|length=753bp
MLLLQHQQQSIHHHHNIHHSSSSNINASTHGSQQTSAQQQSNFGSSSSGS
SATFADVLSSSYGISLTDYGDEGDLNPGSSHHGLIESLGGNYGSANPALG
HHPQQQVAPAAQHHHHPGHHPQQQQHHHHHGESSYESYDSIPNTFHGEFI
TQPIDYQGARGRSSPPTGPLVPPPSSSSNAGSPVTHSPGPIIVPSSPSHL
LPSFLDTYNRQQYEQQQQQQAQQQHQQVVGVPQPTTLEPRYPFKTELPEA
KPICSTFPPPPPSCSSPSSTPTTSSSAFTSSPYQTGGGSNFLLKKEPIYT
CTTAFVPNIAPNSPYQSNSSTNYYHSPSSPSYFSSSSANNTASGSSNNPP
TNNFDRPIVARKTSAPRASTSTSQGSGDAVSKLSIRVPLGPPPPSLSSEC
SPNKASLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKN
CPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPTE
SPPSPPVSLITALVRAHIDTSPDMNNLDYSQFVETSIEDERDSKENMLAN
EAIKIGQFYHVLTSSIEVIRNFCERIPGISELSLNDRDLLFQTSCLELFV
LRLAYRSNPDSDRYTFCNGVVLHVSQCEQTFGDWLNGINEFARGLHSMEL
DISAFSCLCGLILVNGKDERHGLSDPKKVESIENKIINSLKDHVTYNPEA
QKKEHYMTRILDRLPALRSLSMQGLQRIFFLKWEDLVPAPPLIEKMFASS
IPF
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