structural maintenance of chromosomes protein 6, maker-scaffold1000_size72005-snap-gene-0.10 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of structural maintenance of chromosomes protein 6 vs. L. salmonis genes
Match: EMLSAG00000011374 (supercontig:LSalAtl2s:LSalAtl2s787:120465:123793:-1 gene:EMLSAG00000011374 transcript:EMLSAT00000011374 description:"maker-LSalAtl2s787-augustus-gene-0.89") HSP 1 Score: 156.377 bits (394), Expect = 5.151e-39 Identity = 225/994 (22.64%), Postives = 439/994 (44.16%), Query Frame = 0 Query: 180 NGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGKVVHTDKIADDEKKKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRATLLKPLQQMYENAKHDLIVCSETLAEKRDNVKEAEAHWMEIQEKVTKIKRVDEEIKKTAMDLEKQILWGYVQSKEIKLKELKNHVQTLSEKKAKEEAIVAESLKSIEVLLEQERESEKVKRMTEAEVKAITMDYNRAKEEQVEAKGKLDLVVMDLETKSTTLSVLREQERSLANSVRSKKTMKDRKNAERDRHACEMKRKKDQVKEDIIKINHSIQDKGKLRDSLSTCLQKLDQDEKDVRAEKLDAQRH--QRTLE--EDLFNLARSNQSSLKRFGAEFEHLAQDISESRDFKTPPIGPIGS-----------HIRL-VGQASEDKNLADLLETELTKGFLRSFLVATWADSKALSKIFGRHFRGRKPPSIVIWQFRGKKDDIRRGQVQTHSEMPGILDYLEIANPEVFNYVVDFKRIETTLVL-SQTMAQDLFSEAKNVPRNAAKAITPDFYRFIPATKGNYASYFMERPRGHLNTLVADTRSNQATLEAELAKNKADIATADKALKKVQLDKADIASKKDEAVKTITTMNLKLGT-----LKQDLTEVNLALTNQSEGDTIPEMETKLKSLRREIQEAESNVQGLKMRKG-------------ASVLQE-RAAKTILAQQTSKMNEAAQALTDGGLSEIKANIAQKQKEVNR---NKTNLGKVVAEIKSQTAK-AVEAERDFENTK-----RDAKVKTRTEITNVVDRAQLAAHQKELEVRKRQMAAEFDMTPKEMQEKVSRKKKIYVTLKKQLEAVEVNFHKIEAMQEVRKNVFVGIRQSLIRSVRTIFIMRMQDHGLLGNLEVSHTRKTLNIKVSHLRGSQEPKAEDALPLSSLSGGERSKTLVCLMIASWEYMAPPFRCLDEWDVYLDERSRSMIEEVLFSYAK-SKDFQYILISP 1127 N G YR E +G+ I R I +S G S + KD G +V K E +I SIQ+ NP++IL QE AK ++T LY FF+ AT L+ ++ Y +A + L EK D ++ E + ++K ++ + E +K ++ ++ W V+ E + KE+ + L++K K + + E + E L +S+K K ++K++ +EE+ AK L + +++ S + L+ R+ ++ D+ E+ ++K + + ++K R ++ + L+K K + + D H ++T+ ED R S+ K ++ E L++ I + K GS IR G K L D +EL K ++F+ + D K F R++ + S FR D+ +V P + D LE + + N ++D ++IE L+L ++++AQ +FS++ P+N + + R SY+ R +++ + S Q +++ + ++ + +K L QL+ I EA ++ + N+KL K+ + E +T +S + E + + ++ E +++G + KG ASV + +A+ A+ K + + + I+++I Q KE NR KT ++++ + K ++E ++ + K R ++++ EI N + A+ + +++ V + +P+ + ++ R ++ ++ + + ++ ++RK FV IR+S+ R ++ F MR+ +G L H +L + V+ GS K L +LSGGE+S + + L++A W+ M PPFR +DE+DV++D +R + +++ + A ++ FQYI ++P Sbjct: 2 NQGENGYRYEDFGQLITVVRSINRSGGNS-YKFKDAKGHIVPVKK-PSKELSRILTAFSIQITNPVTILMQETAKTLLKDSTDTKLYTFFMLATQLEDCKKFYSSAIEKKMEAESRLEEKNDYKEKLEKEYXTWKKKYDFMQSI-ETRRKDIKGMKAELAWSIVKELENQDKEITLSIDNLNKKVQKYDNLYMEKNEVYEKL-----KSKKDK--VGEDLKSVRATEEALQEEKYAAKQALQVADTHVKSSSRKMDELK------------------RRLSKNDKEILELTTMIKKLKAEGVS---EFEEKRXGRXAIKSALRKEISTAKSI-VDTTDNHLHNIEKTISRIEDQIREHRHEMSASK---SKMETLSKRIKSLQGLKDNKFAVYGSDMHKPIGPLGAFIRFKSGVTKSQKILVD---SELRK-LCQAFIFDNYEDKTVFEK-FARNYNYK--GSKYTLTFRKDIYDVSNKKV-NEGNYPSVFDLLEFDDANIANCLIDHRKIEKILILPTESLAQKMFSQSS--PKNCSYGLVYSEERHCA------CSYYSHPYRSYMSAQL----SQQLLIQSNVGEH---LVGLEKELNAAQLEYNAI----QEAHDSLKSGNIKLNYEERSLSKKKINEQQRIITEKSAKLNVINSEEQTEEPPMDVVVMEEDLEGFEEMKGRLSDELESESEQFASVKEVCLSAQKNYAEIEEKCSTYNTESLERKMLNIQSDINQIDKERNRITQKKTEFSEMISTKQEDKDKVSLEIDKHLQKAKKWSEERIDTIRSKDEIYNKIQAAEQSLKERQERVHE---------SPETITKEYGRLGNLFRSVTTKCITLSEKIQRLGETLDIRKLGFVEIRKSVCRRIKMAFSMRLSAXNYIGXLSFDHKENSLRMSVNP-EGSSVSKQRRGLK--TLSGGEKSYSTISLILALWDSMHPPFRIMDEFDVFMDMVNRRVALDLIINIATDTRKFQYIFLTP 921
BLAST of structural maintenance of chromosomes protein 6 vs. L. salmonis genes
Match: EMLSAG00000003076 (supercontig:LSalAtl2s:LSalAtl2s173:1463937:1472697:1 gene:EMLSAG00000003076 transcript:EMLSAT00000003076 description:"maker-LSalAtl2s173-augustus-gene-14.28") HSP 1 Score: 64.3142 bits (155), Expect = 1.643e-10 Identity = 79/323 (24.46%), Postives = 137/323 (42.41%), Query Frame = 0 Query: 59 LPRYCRATMQDGARSH---KRLRILGEDESGLNSSARSCLDQTVRSGVLKEIRLTNFMNHASLHLRLDDGINLLSGRNGSGKSSILQAIVLGLGGQAKDTKRSTSSRSFVRNDCLKAEIRVRVWNGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGKVVHTDKIADDEKKKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRAT----------LLKPLQQMYENAKHDLIVCSETLAEKRDNVKEAEAHWMEIQEKVTKIKRVDEEIKKTAMDLEKQILWGYVQSKEIKLKELKNHVQTLSEKKAKEE 368 +P C+ +D R KR + E G N S +T G + ++ + +FM + +N++ G NGSGKS+I+ AI LG+GG+AK R+ R F+R +E+++ ++N G R R+ +L +G V I + + + L IQ+ N L Q+ + F+ +L D I A LK LQ+ YE + E LA+ + ++ + EK ++VDE+I + +K++ Y Q KE +++E+ +T+ K+E Sbjct: 1 MPPPCKRPPEDKDRQFIIGKRFQSKHRKEKGHNPSI-IMATETWSHGSIVKVYMKDFMQYGEATFEPGPCLNVILGPNGSGKSTIVNAICLGVGGKAKFLDRAKDPREFIREGTESSELKIELFNDS---------GSNWTITRKWSTRDSRTHWLL---NGASVLQKNI-----EALTKELRIQVENLCQFLPQDRVQ-GFSKMDAKTLLDSTIEAVGEDALKQKHERLKLLQKEYEEFEDQYRSKQELLAQSKSQMERMDGDVKNYHEK----QKVDEKI---GLYKKKRVWLLYAQKKE-EVREMDEEKKTIEASIKKQE 296
BLAST of structural maintenance of chromosomes protein 6 vs. SwissProt
Match: gi|81879970|sp|Q924W5.1|SMC6_MOUSE (RecName: Full=Structural maintenance of chromosomes protein 6; Short=SMC protein 6; Short=SMC-6; Short=mSMC6) HSP 1 Score: 256.529 bits (654), Expect = 2.751e-69 Identity = 281/1120 (25.09%), Postives = 511/1120 (45.62%), Query Frame = 0 Query: 82 EDESGLNSSARSCLDQTVRSGVLKEIRLTNFMNHASL-HLRLDDGINLLSGRNGSGKSSILQAIVLGLGGQAKDTKRSTSSRSFVRNDCLKAEIRVRVWNGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGKVVHTDKIADDEKKKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRATLLKPLQQMYENAKHDLIVCSETLAEKRDNVKEAEAHWMEIQEKVTKIKRVDEEIKKTAMDLEKQILWGYVQSKEIKLKELKNHVQTLSEKKAKEEAIVAESLKSIEVLLEQERESEKVKRMTEAEVKAITMDYNRAK-EEQVEAKG------KLDLVVMD--------LETKSTT-LSVLREQERSLANSVRSKKTMKDR----KNAERDRHACEMKRKKDQVKEDIIKINHSIQDKGKLRDSLSTCLQKLDQDEKDVRAEKLDAQRH-----QRTLEEDLFNLARSNQSSLKRFGAEFEHLAQDISES---RDFKTPPIGPIGSHIRLVGQASEDKNLADLLETELTKGFLRSFLVATWADSKALSKIFGRHF-RGRKPPSIVIWQFRGKKDDIRRGQVQTHSEMPGILDYLEIANPEVFNYVVDFKRIETTLVLSQTMAQDLFSEAKNVPRNAAKAITPDFYRFIPATKGNYASYFMERPR----------GHLNTLVADTRSNQATLEAELAKNKADIATADKALKKVQLDKADIASKKDEAVKTITTM-NLKLGTLKQDLTEVNLA-LTNQSEGDTIPEMETKLKSLRREIQEAESNVQGLKMRKGASVLQERAAKTILAQQTSKMNEAAQALTDG---GLSEI------KANIAQKQKE----VNRNKTNLGKVVAEIKSQTAKAVEAERDFENTKRDAKVKTRTEITNVVDR--AQLAAHQKELEVRKRQMAAEFDMTPKEMQEKVSRKKKIYVTLKKQLEAVEVNFHKIEAMQEVRKNVFVGIRQSLIRSVRTIFIMRMQDHGLLGNLEVSHTRKTLNIKVSHLRGSQEPKAEDALPLSSLSGGERSKTLVCLMIASWEYMAPPFRCLDEWDVYLDERSRSMIEEVLFSYAKSKDF-QYILISPQG-STLKGANIVQIGR 1142 EDE ++ + + G+++ I+L NFM H+ L + +N + G NGSGKS++L A+++GLGG+A T R +S + FV+ A+I + + N G +R VYG I ++ I RS + LK E G VV T K +E I + +IQ++NP+S+L QE +K F + Y FF++AT L+ +++ Y E + + + + E + +E +E+ I + +K L+ ++ W V E +L ++++++ E+ AK L+++ E ++V R+ +AE K + K E+ A+ K D++ L +S L++ L + K D+ + ER + C +K K +++ H++ + + ++K Q+ VR E ++ RH QR L+E L S LKRFG L + I ++ R F PIGP+G+ I L D LA +E+ L KG L+++ AD + L + + + G P I++ +FR + D+R + H E P +L LEI N V N ++D + IET L++ +++ P+N +A T D + G Y S RP+ L T + + + + TL+ L+ + DI ++ LK+ QL +I K + + I + N+ ++ V++A L +++E + I K++ + + +++ + N++ LK K + E TI + ++++E A L D SE+ K + KQKE +N+ + L E++ + ++A + + K+ A + + EI + + A+ A+H E+ K+ A ++ Y+ L ++ + +E + R + R+ L + F + G + H +TL+I V G++ + + +LSGGERS + VC +++ W PFRCLDE+DVY+D +R + +++ A S+ F Q+IL++PQ S+L + +++I R Sbjct: 32 EDECTISFTNGTSTLTAAEVGIIESIQLRNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLKGFVKAGQNSADISITLRNRGDDAFRANVYGDSIVVQQHISVDGSRS-YKLKSEKGTVVSTRK---EELIAILDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDYSYIMETKERTKEQINQGEERLTELKRQCLEKEERFQNIAGLS-TMKTNLEYLKHEMAWAVVNEIEKQLNAIRDNIKIGEERAAK---------------LDRKMEEQQV-RLNDAEKKYKDIQDKLEKISEETNARAPECMALKTDVIARTRAFNDAEVLYNRSLNEYKALKKDGEQLCKRIEELKKSTDQSLEPERLERQKRICWLKEKVKALQDQ----EHTVNQEA---EQFEQAIEKDKQEHGRVRKEDIEV-RHALNYNQRQLKE----LKDSKTDRLKRFGPHVPALLEAIDDAYRRRQFTHKPIGPLGACIHL-----RDPELALAIESCL-KGLLQAYCCHNHADERVLQSLMKKFYPPGTSRPQIIVSEFRDEVYDVRL-RAAYHPEFPTVLTALEIDNAVVANSLIDMRSIETVLLIKNNSVARAVMQSQKPPKNCREAFTADGDQVFA---GRYYSSESTRPKFLSRDVDSEISDLETEIENKKGHIITLQQRLSALEKDIKRNEELLKRCQLHYKEIKMKIRKNISEIRELENI------EEHQSVDIATLEDEAEENKI-----KMQMVEKNMEQQKENMENLKSLK---IEAENKYDTI-KLKINQLSELADPLKDELNLADSEVDSQKRGKQHYEDKQKEHLDTLNKKRRELDMKEKELQEKMSQARQICPERIEVKKSASILDK-EINRLRQKIQAEHASHGDREEIMKQYQEA----------------RETYLDLDNKVRTLRRFIKLLEEIMTHRYKTYQQFRRCLTLRCKLYFDNLLSQRAYCGKMNFDHKNETLSITVQPGEGNKASFND----MRALSGGERSFSTVCFILSLWSIAESPFRCLDEFDVYMDMVNRRIAMDMILKMADSQRFRQFILLTPQSMSSLPSSKLIRILR 1072
BLAST of structural maintenance of chromosomes protein 6 vs. SwissProt
Match: gi|82132692|sp|Q802R8.1|SMC6_TAKRU (RecName: Full=Structural maintenance of chromosomes protein 6; Short=SMC protein 6; Short=SMC-6) HSP 1 Score: 242.662 bits (618), Expect = 1.009e-64 Identity = 273/1096 (24.91%), Postives = 488/1096 (44.53%), Query Frame = 0 Query: 102 GVLKEIRLTNFMNHASL-HLRLDDGINLLSGRNGSGKSSILQAIVLGLGGQAKDTKRSTSSRSFVRNDCLKAEIRVRVWNGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGKVVHTDKIADDEKKKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRATLLKPLQQMYENAKHDLIVCSETLAEKRDNVKEAEAHWMEIQEKVTKIKRVDEEIKKTAMDLEKQILWGYVQSKEIKLKELKNHVQTLSEKKAKEEAIVAESLKSIEVLLEQERESEKVKRMTEAEVKAITMDYNRAKEEQVEAKGKLDLVVMDLETKSTTL----SVLREQER----------SLANSVRSKKTMKDRKNAER-----------DRHACEMKRKKDQVKEDIIKINHSIQDKGKLRDSLSTCLQKLDQDEKDVRAEKLDAQRHQRTLEEDLFNLARSNQSSLKRFGAEFEHLAQDISESR---DFKTPPIGPIGSHIRLVGQASEDKNLADLLETELTKGFLRSFLVATWADSKALSKIFGRHFRGRKPPSIVIWQFRGKKDDIRRGQVQTHSEMPGILDYLEIANPEVFNYVVDFKRIETTLVLSQTMAQDLFSEAKNVPRNAAKAITPDFYRFIP-------ATKGNYASYFMERPRGHLNTLVADTRSNQATLEAELAKNKADIATADKALKKVQLDKADIASKKDEAVKTITTMNLKLGTLK-------QDLTEVNLALTN--------------QSEGDTIPEMETKLKSLRREIQEAESNVQGLKMRKGASVLQERAAKTILAQQTSKMNEA-AQALTDGGLSEIKA---NIAQKQKEVNRNKTNLGKVVAE--IKSQTAKAVEAERDFENTKRDAKVKTRTEITNVVDRAQLAAHQKELE--VRKRQMAAEFDMTPKEMQEKVSRKKKIYVTLKKQLEAVEVNFHK-IEAMQEVRKNVFVGIRQSLIRSVRTIFIMRMQDHGLLGNLEVSHTRKTLNIKVSHLRGSQEPKAEDALPLSSLSGGERSKTLVCLMIASWEYMAPPFRCLDEWDVYLD--ERSRSMIEEVLFSYAKSKDFQYILISPQG 1129 G++K I L NFM HA+L +N + G+NGSGKS+IL +++ LGG A+ T R +S + FV+ A + + + N G Y+PEVYG+ I ++ I + R+ + LK +SG ++ T K ++ I ++ +IQ+NNP++IL QE +K F + G Y FF++AT L+ ++ + + K V + + + + +K+ + ++E +++ + V+E K +L+KQ+ W V E + + +K +++ K V E K +EV +E ++ + +++ IT + + + E K ++ DL++ T+ ++LR+ E+ L+ S+ + + ER H + ++ +Q + H+I+ +GK++ L LQK +DA R Q L ++ S + L+RFG + L I E+ FK P GP+G I L +D LA +E L K +++F + D + L + + + + P+I+ +F K D+ V H + P +L LEI +P V N ++D + IE L++ + +N P+N A + + + T+ N+ S +E HL + + A ++ ++ +I+ L++ Q + +K VKT+ + L+L LK +DL E+ A N +E + ++ETKL L N+ L + +LQE +KT K +E + + L IK N+A K+KE+ + ++ E + +TA+++ D E T+ K+ T+ E HQ + E VR+ A E Y +Q++ + NF K ++ + + R + +R+ L + F + G GN+ H +TL+I V +G++ D + LSGGERS + VC +++ W PFRCLDE+DVY+D R + + L K Q I ++PQ Sbjct: 53 GIVKSITLNNFMCHANLGPFAFGSNVNFIVGKNGSGKSAILTGLIVALGGNAQATNRGSSLKGFVKEGESFAVVSITLNNIGKDAYKPEVYGQAIVIDQKITREGIRT-YKLKSQSGHIISTKK---EDLVTILDYYNIQVNNPVTILTQEMSKYFLHSKGGAEKYKFFMKATQLEQMKDDFVHIKSTKSVTVDKVEQHSECLKDLKRDYLEKEDRYKSLASVNEMYTKLE-ELKKQMAWALVGEVEKEFEPMKEKLESDRCATNKFNEKVDEWKKKVEV-------AEGKQKQSHEQLEEITQQVSELQSKCTEFKTEVQRRNADLKSCEVTVHRHKAILRDLEKDKAQLSSKINDLSLSISQATGAESQARMERIAQIEAALEDLTHHTSTLGQQIEQYQHS---YRHAIEGQGKMKRELEG-LQK-----------SIDANRRQ------LQSMESSRSNRLQRFGDQMPALLAAIDEAHKKGQFKHRPRGPLGYLISL-----KDPELALSIEICL-KNLVQAFTCDNYDDERVLKSLMTKVLQHGRRPAIITSRFFPKVHDVSVRAV-NHPDYPSVLQALEIEDPVVANCLIDQRAIECILLIKNRTEARRVMQGRNPPQNCTSAFSVEGDQIFTNRSYTADQTRANFLSKDVEEGIRHLKREMETQKVQAAHIQQQIRSTDKNISENQDLLRRTQTE------QKTTEVKTM-KLQLELTDLKNVEEPQSEDLAELKSAFENAEQEYKQHKQLIDTAAEEADVKKVETKLTPL---FTSLSCNI--LWVHCLFVLLQEELSKTDQEVMKCKHHEKHYEERRNAHLCSIKTLENNVASKEKELQESIAKAKEICPEQLVVRRTARSL----DVEITRLKVKIATQRE------------HQGDREEIVREYHEALES-----------------YANKAQQIKNLN-NFIKCLDRVMDQRLYAYTVLRRFLSARCKYYFDSMLAQRGFTGNMTFDHKNETLSISVQPGQGNK----ADLNDMRCLSGGERSFSTVCFVLSLWPITEAPFRCLDEFDVYMDMANRRNTQRQSGLKMATSQKIRQLIFLTPQS 1058
BLAST of structural maintenance of chromosomes protein 6 vs. SwissProt
Match: gi|122070455|sp|Q96SB8.2|SMC6_HUMAN (RecName: Full=Structural maintenance of chromosomes protein 6; Short=SMC protein 6; Short=SMC-6; Short=hSMC6) HSP 1 Score: 242.276 bits (617), Expect = 1.298e-64 Identity = 276/1095 (25.21%), Postives = 502/1095 (45.84%), Query Frame = 0 Query: 102 GVLKEIRLTNFMNHASL-HLRLDDGINLLSGRNGSGKSSILQAIVLGLGGQAKDTKRSTSSRSFVRNDCLKAEIRVRVWNGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGKVVHTDKIADDEKKKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRATLLKPLQQMYENAKHDLIVCSETLAEKRDNVKEAEAHWMEIQEKVTKIKRVDEEIKKTAMDLEKQILWGYVQSKEIKLKELKNHVQTLSEKKAKEEAIVAESLKSIEVLLEQERESEKVKRMTEAEVKAITMDYNRAK-EEQVEAKG------KLDLVVMD--------LETKSTT-LSVLREQERSLANSVRSKKTMKDRKNAERDRHACEMKRKKDQVKEDIIKINHSIQDKGKLRDSLSTCLQKLDQDEKDVRAEKLDAQR----HQRTLEEDLFNLARSNQSSLKRFGAEFEHLAQDISESR---DFKTPPIGPIGSHIRLVGQASEDKNLADLLETELTKGFLRSFLVATWADSKALSKIFGR-HFRGRKPPSIVIWQFRGKKDDIRRGQVQTHSEMPGILDYLEIANPEVFNYVVDFKRIETTLVLSQTMAQDLFSEAKNVPRNAAKAITPDFYRFIPATKGNYASYFMERPR----------GHLNTLVADTRSNQATLEAELAKNKADIATADKALKKVQLDKADIASKKDEAVKTITTM-NLKLGTLKQDLTEVNLALTNQSEGDTIPEMETKLKSLRREIQEAESNVQGLKMRKGASVLQERAAKTILAQQTSKMNEAAQALTDG---GLSEI------KANIAQKQKE----VNRNKTNLGKVVAEIKSQTAKAVEAERDFENTKRDAKVKTRTEITNVVDR--AQLAAHQKELEV-RKRQMAAEFDMTPKEMQEKVSRKKKIYVTLKKQLEAVEVNFHKIEAMQEVRKNVFVGIRQSLIRSVRTIFIMRMQDHGLLGNLEVSHTRKTLNIKVSHLRGSQEPKAEDALPLSSLSGGERSKTLVCLMIASWEYMAPPFRCLDEWDVYLDERSRSMIEEVLFSYAKSKDF-QYILISPQG-STLKGANIVQIGR 1142 G+++ I L NFM H+ L + +N + G NGSGKS++L A+++GLGG+A T R +S + FV++ A+I + + N G ++ VYG I ++ I RS + LK +G VV T K +E I + +IQ++NP+S+L QE +K F + Y FF++AT L+ +++ Y E + + + + E + +E +E+ I + +K L+ ++ W V E +L ++++++ ++ A+ L+++ E ++V R+ EAE K + K E+ A+ K D+V L +S L++ + L + K D ++ E +R E ++K +KE + + + + ++K ++ ++ E+LD + +QR L+E L S LKRFG L + I ++ F P+GP+G+ I L D LA +E+ L KG L+++ AD + L + R + G P I++ +FR + D+R + H + P +L LEI N V N ++D + IET L++ +++ P+N +A T D + G Y S RP+ L V + + L+ L+ + DI ++ LK+ QL ++ K + + I + N+ ++ V++A D E ++K+K + +++ + N++ LK K + + A K + Q ++E A L D SE+ K + +KQKE +N+ K L E++ + ++A + + ++ A + + EI + + A+ A+H E+ R+ Q A E T ++ KV KK L + +E H+ + Q+ R+ L + F + G + H +TL+I V G++ + + +LSGGERS + VC +++ W PFRCLDE+DVY+D +R + +++ A S+ F Q+IL++PQ S+L + +++I R Sbjct: 46 GIIESIHLKNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGRAVATNRGSSLKGFVKDGQNSADISITLRNRGDDAFKASVYGNSILIQQHISIDGSRS-YKLKSATGSVVSTRK---EELIAILDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDYSYIMETKERTKEQIHQGEERLTELKRQCVEKEERFQSIAGLS-TMKTNLESLKHEMAWAVVNEIEKQLNAIRDNIKIGEDRAAR---------------LDRKMEEQQV-RLNEAEQKYKDIQDKLEKISEETNARAPECMALKADVVAKKRAYNEAEVLYNRSLNEYKALKKDDEQLCKRIEELKKSTD-QSLEPER--LERQKKISWLKERVKAFQNQENSVNQEIEQFQQAIEKDKEEHGKIKREELDVKHALSYNQRQLKE----LKDSKTDRLKRFGPNVPALLEAIDDAYRQGHFTYKPVGPLGACIHL-----RDPELALAIESCL-KGLLQAYCCHNHADERVLQALMKRFYLPGTSRPPIIVSEFRNEIYDVRH-RAAYHPDFPTVLTALEIDNAVVANSLIDMRGIETVLLIKNNSVARAVMQSQKPPKNCREAFTADGDQVFA---GRYYSSENTRPKFLSRDVDSEISDLENEVENKTAQILNLQQHLSALEKDIKHNEELLKRCQLHYKELKMKIRKNISEIRELENI------EEHQSVDIATLE----DEAQENKSKMKMVEEHMEQQKENMEHLKSLKIEAENKYDAIKFKINQ----LSELADPLKDELNLADSEVDNQKRGKRHYEEKQKEHLDTLNKKKRELDMKEKELEEKMSQARQICPERIEVEKSASILDK-EINRLRQKIQAEHASHGDREEIMRQYQEARE---TYLDLDSKVRTLKKFIKLLGEIME------HRFKTYQQFRR--------CLTLRCKLYFDNLLSQRAYCGKMNFDHKNETLSISVQPGEGNKAAFND----MRALSGGERSFSTVCFILSLWSIAESPFRCLDEFDVYMDMVNRRIAMDLILKMADSQRFRQFILLTPQSMSSLPSSKLIRILR 1066
BLAST of structural maintenance of chromosomes protein 6 vs. SwissProt
Match: gi|82186704|sp|Q6P9I7.1|SMC6_XENLA (RecName: Full=Structural maintenance of chromosomes protein 6; Short=SMC protein 6; Short=SMC-6; Short=xSMC6) HSP 1 Score: 240.35 bits (612), Expect = 7.739e-64 Identity = 290/1110 (26.13%), Postives = 495/1110 (44.59%), Query Frame = 0 Query: 102 GVLKEIRLTNFMNHASL-HLRLDDGINLLSGRNGSGKSSILQAIVLGLGGQAKDTKRSTSSRSFVRNDCLKAEIRVRVWNGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGKVVHTDKIADDEKKKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRATLLKPLQQMYENAKHDLIVCSETLAEKRDNVKEAEAHWMEI-QEKVTKIKRVDE-----EIKKTAMDLEKQILWGYVQSKEIKLKELKNHVQTLSEKKAKEEAIVAESLKSIEVLLEQERESEKVKRMTEAEVKAITMDYNRAKEEQVEAKGKLDLVVMDLETKSTTLS---VLREQER-SLANSVRSKKTMKDR-----KNAERDRHACEMKRKK--DQVKEDI-------IKINHSIQDKGKLRDSLSTCLQKLDQDEKDVRAEKLDAQRHQRTLEEDLFNLARSNQSSLKRFGAEFEHLAQDISESRD---FKTPPIGPIGSHIRLVGQASEDKNLADLLETELTKGFLRSFLVATWADSKALSKIFGRHF-RGRKPPSIVIWQFRGKKDDIRRGQVQTHSEMPGILDYLEIANPEVFNYVVDFKRIETTLVLSQTMAQDLFSEAKNVPRNAAKAITPDFYRFIPATKGNYASYFMERPRGHLNTLVADTRSNQATLEAELAKNKADIATADKALKKVQLDKADIASKKDEAVKTITTMNLKLGTLKQDLTEVNLALTNQSEGDTIPEMET-KLKSLRREIQEAESNVQGLKMRKGASVLQERAAKTILAQQTSKMNEAAQALTDGGLS--EIKANIAQKQKEVNRNKTNLGKVVAEIKSQTAKAVEAERDFENTKRDAKVKTRTEITNVVDRAQ-----LAAHQKELEVRKRQ-------------MAAEFDMTPKEMQEKVSRKK----------KIYVTLKKQLEAVEVNFHK----IEAMQEV---RKNVFVGIRQSLIRSVRTIFIMRMQDHGLLGNLEVSHTRKTLNIKVSHLRGSQEPKAEDALPLSSLSGGERSKTLVCLMIASWEYMAPPFRCLDEWDVYLDERSRSMIEEVLFSYAKSKDF-QYILISPQG-STLKGANIVQIGR 1142 G+++ I L NFM H+ L R +N + G NGSGKS++L A+++GLGG+A T R +S + FV+ AEI + + N G Y+P+V+G I ++ + + G + LK +G VV K +E I + +IQ++NP+S+L QE +K F + Y FF++AT L E K D ET + D V+ ++ QE + K +R E+K+ DL+ ++ W V E ++K + T + K E + E + +E+ R + E+ IT +E V K + + D++ K + + VL + R L R + + R K+A+ D + +M R+K +Q++E + I N I + + ++ +E+++ K ++H+R L+E L S LKRFG L I E+ F+ P+GP+G+ I L +D+ LA +E+ L KG + +F D + L I R + RGR+ P I++ +F D+R+ + H + P +L LEI +P V N ++D + IET L++ + + PRN +A T + + Y + + L D + + LE EL + +AT + + V D K++E + + + KQ ++ L SE + + E + + +L EAE N+ +++ V QE LA++ KM LT ++ EIK I+ + K +L +V E+ EN KR K ++ +DR Q +AA ++ELEV+ Q A D ++EK++ ++ K Y K++ + VE I+ + E+ R + R+ L + F + G + H +TL+I V G++ ++ + LSGGERS + VC +++ W PFRCLDE+DVY+D +R + +++ S A S+ F Q+IL++PQ S+L ++V+I R Sbjct: 85 GIIESIFLRNFMCHSMLGPFRFGPNVNFVIGNNGSGKSAVLTALIVGLGGKAAITNRGSSIKGFVKEGQTFAEISITLRNRGQDAYKPDVFGNSITVQQRL-TTDGSRTYKLKSATGAVVSNKK---EELTAILDHFNIQVDNPVSVLTQEMSKHFLQSKNESDKYKFFMKATQL-------EQMKEDYSYIMETKSRTHDQVENGGERLRDLRQECIQKEERFKSIASLGEMKEKLEDLKNKMAWALVTESEKQIKPFIEQISTEEGRTVKYEQKIEECQGKV-------INAEEKFRAKQEELDKIT-------QEAVALKPQGIGLKEDVQKKRKSYNESEVLYNRHRMELKRLERDAEQLHKRIEELKKSADNDSESEKMARQKEINQIRERMKALHDKDITTNQQIHQFQQAIEKYKEERARIGNEERNI---KQRLEQHKRQLKE----LHESKTDRLKRFGQNMPALLAAIDEADKLGRFRKKPVGPLGACIHL-----KDQELALAVESCL-KGLMFAFCCDNHQDERMLQNIMSREYPRGRR-PQIIVNEFIDHVYDVRQ-RATFHPDHPTVLTALEIDHPVVTNCLIDMRGIETILIIKGKDEAREIMQKRAPPRNCREAFTGEGDQV-------YTNRYYSSDSRRATLLSRDVEAEISHLEKELRNFGSQMATFQQRAQSVDKD-----IKENEGI-----LRQYHNSKKQIQIDLRPLLERISELENVEEQPSIDIATLE---GEAEENLNKIEL-----VKQE----VELAKE--KMGNLKSFLTTAEINYEEIKKKISSVAEVAEPVKEDLHRVDQEV--------------ENCKRHRK-HYEEKLKEHLDRIQKRKEEVAAKEQELEVKISQAKCICPERIEVSRTARSLDTEINRLREKINSEEVLHGNREEIIKQYHEAKERYQDVEGKVKHLKRFIKLLDEIMAQRYKSYQQFRRCLTFRCKIYFDSLLSQRAYSGKINFDHKNETLSITVQPGEGNKAALSD----MKCLSGGERSFSTVCFILSLWSIAESPFRCLDEFDVYMDMVNRRISMDMMLSMADSQRFRQFILLTPQNMSSLPSTSLVRILR 1104
BLAST of structural maintenance of chromosomes protein 6 vs. SwissProt
Match: gi|75333915|sp|Q9FII7.1|SMC6B_ARATH (RecName: Full=Structural maintenance of chromosomes protein 6B; AltName: Full=DNA repair protein RAD18; Short=AtRAD18) HSP 1 Score: 214.157 bits (544), Expect = 1.456e-55 Identity = 269/1092 (24.63%), Postives = 517/1092 (47.34%), Query Frame = 0 Query: 93 SCLDQTVRSGVLKEIRLTNFMNHASLHLRLDDGINLLSGRNGSGKSSILQAIVLGLGGQAKDTKRSTSSRSFVRNDCLKAEIRVRVWNGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGKVVHTDKIADDEKKKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRATLLKPLQQMYENAKHDLIVCSETLAEKRDNVKEAEAHWMEIQEKVTKIKRVDEEIKKTAMDLEKQILWGYVQSKEIKLKELKNHVQTLSEKKAKEEAIVAESLKSIEVLLEQERESEKVKRMTEAEVKAITMDYNRAKEEQVEA---------KGKLDLVVMDLETKSTTLSVLREQERSLANSVR--SKKTMKDRKNAERDRHACEMKRKKDQVKEDIIKINHSIQDKGKLRDSLSTCLQKLDQDEKDV-RAEKL--DAQRHQRTLEEDLFNLARSNQSSLKRFGAE-FEHLAQDISES-RDFKTPPIGPIGSHIRLVGQASEDKNLADLLETELTKGFLRSFLVATWADSKALSKIFGR-HFRGRKPPSIVIWQFRGKKDDIRRGQVQTHSEMPGILDYLEIANPEVFNYVVDFKRIETTLVLSQTMAQDLFSEAKNVP-----RNAAKAITPDFYR-FIPATKGNYASYFMERPRGHLNTLVADTRSNQATLEAELAKNKADIATADKALKKVQLDKADIASK-------KDEAVKTITTMNLKLGTLKQDLTEVNLALTNQSEGDTIPEMETKLKSLRREIQEAESNVQGLKMRKGASVLQERAAK-TILAQQTSKMNEAAQALTDG------GLSEIKANIAQKQKE-VNRNKTNLGKVVAEIKSQTAKAVEAE-RDFENTKRDAKVKTRTEITNVVD---------RAQLAAHQKELEVRKRQMAAEFD---MTPKEMQEKVSRKKKIYVTLKKQLEAVEVNFHKIEAMQEVRKNVFVGIRQSLIRSVRTI-FIMRMQDHGLLGNLEVSHTRKTLNIKVSHLRGSQEPKAEDALPLSSLSGGERSKTLVCLMIASWEYMAPPFRCLDEWDVYLDERSRSMIEEVLFSYAKSKDFQYILISPQGSTL 1132 S + Q SG + I++ NFM H++L + + +N ++G+NGSGKS+IL A+ + G +A+ T+R+ + + F++ C A ++V + N G ++PE+YG I ER I +S+ + VLKD GK V + DE +++ E +I + NP ++ Q++++ F + + FF +ATLL+ + + ++ L + + E + +K E E++ K+ +++V EEI + L+K++ W +V + +L+E + L E+ +A + L +E L R++ K+ A+V A MD + A + ++E+ + K+ L + K + ++++ R L V +++TMK+ + AE+ E++ K +++++ K+ + +L++ + L+K + K + E + + Q+ QR + ++ +L + + + FG + +L Q I + R F+ PPIGPIGSH+ LV ++ L T L +F+V DS L ++R K I+I+ F + +I R V +E P I ++ NP V N +VD +E Q +A++ + E K V N + T D Y+ F RP + L A LE E +K + +I + ++ + + ++ K + +A K +TT L++ LK + AL + S + E++ ++ EI E E+ ++ L+ + L+E K L M E+A+ D L +I+ ++ + E ++ KV+ +IK+ A E + + E+ ++ +++ +EI ++ AQ+ + L +Q + D M + ++ K+++K+K Y +++L A + A + ++N SL+R T F + G+ G+++VS+ KTL+I+V + Q+ + LSGGERS + +C +A E PFR +DE+DV++D SR + + L +A + Q++ I+P ++ Sbjct: 11 SFIKQRSGSGSILRIKVENFMCHSNLQIEFGEWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAATLKDFIKTGCSYAVVQVEMKNSGEDAFKPEIYGGVIIIERRITESA--TATVLKDYLGKKVSNKR---DELRELVEHFNIDVENPCVVMSQDKSREFLHSGNDKDKFKFFFKATLLQQVNDLLQSIYEHLTKATAIVDELENTIKPIEKEISELRGKIKNMEQV-EEIAQRLQQLKKKLAWSWVYDVDRQLQEQTEKIVKLKERIPTCQAKIDWELGKVESL----RDTLTKKK---AQV-ACLMDESTAMKREIESFHQSAKTAVREKIAL-QEEFNHKCNYVQKIKDRVRRLERQVGDINEQTMKNTQ-AEQS----EIEEKLKYLEQEVEKVETL---RSRLKEEENCFLEKAFEGRKKMEHIEDMIKNHQKRQRFITSNINDLKKHQTNKVTAFGGDRVINLLQAIERNHRRFRKPPIGPIGSHVTLVNGNKWASSVEQALGT-----LLNAFIVTDHKDSLTLRGCANEANYRNLK---IIIYDFSRPRLNIPRHMV-PQTEHPTIFSVIDSDNPTVLNVLVDQSGVE-----RQVLAEN-YEEGKAVAFGKRLSNLKEVYTLDGYKMFFRGPVQTTLPPLSRRP----SRLCASFDDQIKDLEIEASKEQNEINQCMRRKREAEENLEELELKVRQLKKHRSQAEKVLTTKELEMHDLKNTVAAEIEALPSSS----VNELQREIMKDLEEIDEKEAFLEKLQ-----NCLKEAELKANKLTALFENMRESAKGEIDAFEEAENELKKIEKDLQSAEAEKIHYENIMKNKVLPDIKNAEANYEELKNKRKESDQKASEICPESEIESLGPWDGSTPEQLSAQITRMNQRLHRENQQFSESIDDLRMMYESLERKIAKKRKSYQDHREKLMACKNALDSRWA--KFQRNA------SLLRRQLTWQFNAHLGKKGISGHIKVSYENKTLSIEV---KMPQDATSNVVRDTKGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDALVDFAIGEGSQWMFITPHDISM 1040
BLAST of structural maintenance of chromosomes protein 6 vs. SwissProt
Match: gi|1709997|sp|P53692.1|SMC6_SCHPO (RecName: Full=Structural maintenance of chromosomes protein 6; AltName: Full=DNA repair protein rad18) HSP 1 Score: 203.756 bits (517), Expect = 3.679e-52 Identity = 259/1108 (23.38%), Postives = 482/1108 (43.50%), Query Frame = 0 Query: 100 RSGVLKEIRLTNFMNHASLHLRLDDGINLLSGRNGSGKSSILQAIVLGLGGQAKDTKRSTSSRSFVRNDCLKAEIRVRVWNGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGKVVHTDKIADDEKKKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRATLLKPLQQMYENAKHDLIVCSETLAEKRDNV-----KEAEAHWMEIQEKVTKIKRVDEEIKKTAMDLEKQILWGYVQSKEIKL----KELKNHVQTLSEKKAKEEAIVAESLKSIEVLLEQERESEKVKRMTEAEVKAITMDYNRAKEEQVEAKGKLDLVVMDLETKSTTLSVLREQERSLANSVRSKKTMKD----RKNAERDRH----ACEMKRKKDQ---VKEDIIKINHSIQDKGKLRDSLSTCLQKLDQD------EKDVRAEKL-DAQRHQRTLEEDLFNLARSNQSSLKRFGAEFEHLAQDISESRDFKTPPIGPIGSHIRLVGQASEDKNLADLLETELTKGFLRSFLVATWADSKALSKIFGRHFRGRKPPSIVIWQFRGKKDDIRRGQVQTHSEMPGILDYLEIANPEVFNYVVDFKRIETTLVLSQTMAQDLFSE--AKNV-------PRNAAKA--------------ITPDFYRFIPATKGNYASYFMERPRGHLNTL-----VADTRSNQATLEAELAKNKAD----IATADKALKKVQLDKADIASKKDEAVKTITTMNLKLGTLKQDLTEVNLALTNQSEGDTIPEMETKLKSLRREIQEAESNVQGLKMRKGASVLQERAAKTILAQQTSKMNEAAQALTDGGLSEIKANIAQKQKEVNRNKTNLGKVVAEIKSQTAKAVEAERDFENTKRDAKVKTRTEITNVVDRAQLAAHQKELEVRKRQM---------------AAEFDMTPKEMQEKVSRKKKIYVTLKKQLEAVEVNFHKIEAMQEVRKNVFVGIRQSLIRSVRTIFIMRMQDHGLLGNLEVSHTRKTLNIKVS----HLRGSQEPKAEDALPLSSLSGGERSKTLVCLMIASWEYMAPPFRCLDEWDVYLDERSRSMIEEVLFSYAK-SKDFQYILISPQ 1128 R GV++ I L NFM H SL + IN + G NGSGKS+IL + + LG +A +T R+ + +S V+ A I V + N G + Y+PE+YGK I ER I + G S + L+ +G V+ T + DE IC+ + +Q++NP++IL Q+ A+ F N++ Y F++ LK L++ Y + LI L K+ V KE E + Q + T E + + +++W V E +L KE ++ LSE K E+IV Q K+ E RAK E K K + +V + + ++ + Q+R + NS+ + K+ D + N ER R +++++ ++ ++ +I ++ I + R+ L + L ++ + +KD A K+ D H + LE+ + R S+ FG L + I+ F+ PP GP+G ++ + Q L+ + + F+V + D L ++ + ++V+ GK D + S+ P +L ++ + EV + +++ IE L++ + + + NV PRN +TP + R P G +S +E + L+ L A + N+A +E AK K D + + K++ L + ++ S + + + + T K+ TL++ I E E +L+S ++Q+A++ ++ + + + R + + +T +++ LS ++ + ++ R++ + ++ + AK V+ + + AK TR E V QL+ + + E+ + QM AAE + KE ++ K + L + L+A+E + R ++ R+ + + +F + + G L + H + L +V +L + + + + LSGGE+S +C++++ WE M+ P RCLDE+DV++D +R + +++ AK S D Q+I I+PQ Sbjct: 93 RVGVIECIHLVNFMCHDSLKINFGPRINFVIGHNGSGKSAILTGLTICLGAKASNTNRAPNMKSLVKQGKNYARISVTISNRGFEAYQPEIYGKSITIERTI-RREGSSEYRLRSFNGTVISTKR---DELDNICDHMGLQIDNPMNILTQDTARQFLGNSSPKEKYQLFMKGIQLKQLEENYSLIEQSLINTKNVLGNKKTGVSYLAKKEEEYKLLWEQSRET------ENLHNLLEQKKGEMVWAQVVEVEKELLLAEKEFQHAEVKLSEAKENLESIVT----------NQSDIDGKISSKEEV--------IGRAKGETDTTKSKFEDIVKTFDGYRSEMNDVDIQKRDIQNSINAAKSCLDVYREQLNTERARENNLGGSQIEKRANESNNLQREIADLSEQIVELESKRNDLHSALLEMGGNLTSLLTKKDSIANKISDQSEHLKVLED----VQRDKVSA---FGKNMPQLLKLITRETRFQHPPKGPMGKYMTVKEQK------WHLIIERILGNVINGFIVRSHHDQLILKELMR---QSNCHATVVV----GKYDPFDYSSGEPDSQYPTVLKIIKFDDDEVLHTLINHLGIEKMLLIEDRREAEAYMKRGIANVTQCYALDPRNRGYGFRIVSTQRSSGISKVTP-WNR--PPRIGFSSSTSIEAEKKILDDLKKQYNFASNQLNEAKIEQ--AKFKRDEQLLVEKIEGIKKRILLKRREVNSLESQELSVLDTE--KIQTLER----------------RISETEKELESYAGQLQDAKNEEHRIRDNQRPVIEEIRIYREKIQTETQRLSSLQTE-----LSRLRDEKRNSEVDIERHRQTVESCTNILREKEAKKVQCAQVVADYT--AKANTRCERVPV----QLSPAELDNEIERLQMQIAEWRNRTGVSVEQAAEDYLNAKEKHDQA---KVLVARLTQLLQALEETLRR-------RNEMWTKFRKLITLRTKELFELYLSQRNFTGKLVIKHQEEFLEPRVYPANRNLATAHNRHEKSKVSVQGLSGGEKSFATICMLLSIWEAMSCPLRCLDEFDVFMDAVNRLVSIKMMVDSAKDSSDKQFIFITPQ 1108
BLAST of structural maintenance of chromosomes protein 6 vs. SwissProt
Match: gi|74852390|sp|Q54I56.1|SMC6_DICDI (RecName: Full=Structural maintenance of chromosomes protein 6; Short=SMC protein 6; Short=SMC-6) HSP 1 Score: 184.111 bits (466), Expect = 5.592e-46 Identity = 261/1099 (23.75%), Postives = 471/1099 (42.86%), Query Frame = 0 Query: 101 SGVLKEIRLTNFMNHASLHLRLDDGINLLSGRNGSGKSSILQAIVLGLGGQAKDTKRSTSSRSFVRNDCLKAEIRVRVWNGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGKVVHTDKIADDEKKKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRATLLKPLQQMYENAKHDLIVCSETLAEK-------RDNVKEAEAHWMEIQEKVTKIKRVDEEIKKTAMDLEKQILWGYV--QSKEIKLKE----------LKNHVQTLSEKKAKEEAIVAESLKSIEVLLEQERESEKVKRMTEAEVKAITMDYNRAK-EEQVEAKG-KLDLVVMDLETKSTTLSVLREQERSLANSVRSKKTMKDRKNAERDRHACEMKRKKDQVKEDIIKINHSIQDKGKLRDSLSTCLQKLDQDEKDVRAEKLDAQRHQRTLEEDLFNLARSNQSSLKRFGAEFEHLAQDISES-RDFKTPPIGPIGSHIRLVGQASEDKNLADLLETELTKGFLRSFLVATWADSKALSKI---FGRHFRGRKPPSIVIWQFRGKKDDIRRGQVQTHSEMPGILDYLEIANPEVFNYVVDFKRIETTLVLSQTMAQDLFSEAKNVPRNAAKAITPDFYRFIPATKGNYASYFMERPRGHLNTLVADTRSNQATLEAELAKNKADIATADKALKKVQLDKADIASKKDEAVKTITTMNLKLGTLKQDLTEVN---LALTNQ---------SEGDTIPEMETKLKSLRREIQ--EAESNVQGLKMRKGASVLQERAAKTILAQQTSKMNEAAQALTD------GGLSEIKANI---AQKQKEVNRNKTNL----GKVVAE---IKSQTAKAVEAERDFENTKRDAKVKTRTEI----TNVVDRAQLAAHQKELEVRKRQMAAEFDMTPKEMQEKVSRKK--KIYVTLKKQLEAVEVNFHKIEAMQEV-------RKNVFVGIRQSLIRSVRTIFIMRMQDHGLLGNLEVSHTRKTLNIKVS---HLRGSQEPKAEDALPLSSLSGGERSKTLVCLMIASWEYMAPPFRCLDEWDVYLDERSRSMIEEVLFSYA-KSKDFQYILISP 1127 +G+++ I L NFM H L +N ++G NGSGKS++L A+++ LG +A T R + V+ + A I V++ N G + ++PE YGK + ER I + +G S + +KD +GK V +DK D I E +IQ++NP+SIL Q+ ++ F + Y F+ AT L + + Y + + + L++K V+E + ++Q+ V +++ E + Q+ W +V +E K KE N ++ + E + + K I+ +Q + E+ K E+ +T++ AK + Q+EA K + +++ ++E+ LAN+ +K + + K + + KE++IK + +RD + L +D ++ R R L L NL + + + +G I S R+F PIGPIG +++ ++++ A +E+ ++K LR+FLV + D L K+ FG K P + D++ + +L L+ + + N+++D K++E + + D PR ++ P + GN Y + G L ++ +A + + + D+ + AL + + + +++S + + K+ QD + + L +TN+ + D E+E L SL EI+ + E N+Q +A +T +A Q E +AL D L I+ N+ + +++N NK L G+ E K++ + +E + E T + ++ R EI TN ++ + K+LE KE + K SR + K++ L+ + IE + + R + R S+ R F + + G G+L H L+I V L +Q A+ LSGGERS + V L++A WE M PFR +DE+DV++DE +RS+ +L S A +++ QYI ++P Sbjct: 146 AGIIESITLENFMCHRHFKLDFCSNVNFIAGENGSGKSAVLIALIVCLGAKAGFTNRGSKLSDLVKAETNTAVITVKLRNQGQEAFKPEKYGKSVIIERRISR-TGSSGYKVKDYNGKTV-SDKFND--VSLILEQFNIQIDNPMSILTQDTSRQFLNSAGPQDKYKSFLMATQLDKMTKDYTTIREHIDKIKDMLSQKVVVIQELEKKVREYNKEYKDLQQMVGLERKISE--------FKNQLAWSFVVESEREAKRKEKQVAEAEERSFDNDIRKVDETIETYNKSIEDIKKDIKEFTDQIKIQEQKKETNNREI--LTIEREEAKIQTQIEANNKKRQQRKQRRHLQLQSINEIKERNAQLANNQSKLDEIKKK---------GQQKLQLEARKEELIKEKEDL-----MRDR-----ENLKRDHQNQRTITQQMNREYEGLRVQLNNLRSTQKGENQAYGKGMTDFLHKIEASRRNFSKLPIGPIGLSLKI-----KNESWAFAIESAISKATLRNFLVFSIPDGITLQKLGHQFGIKVDYTKIPETTEVYKTVEHDEL-------DPSLATVLRVLDSPSHFIINFLIDTKKVEQIGLGNDRKEIDSVLYTDRCPRGLSQFFDPQGNNYSKTKSGN-PFYQAAKNSGEATMLRVNS-------DAAIQRTQRDMESKLPALNQQKKIEQELSS-------DVQAIEHKISQNDQDQNQCSRKILQITNEIKSIEDTLVQQTDDYSELEIGLASLDEEIKSMDEEINIQ-------------KAQRTEVAAQKGPFAENNRALDDQIDVLSNQLGNIENNLRKFNEGLRKLNNNKQALLQQQGRSAQERDQFKAEYQRILEIVK--EKTDKATQICERIEIPTNETNTTLTNKIIQYTKQLE--------------KESRGKRSRTEALKLFQDANNSLKEISEQRDNIEELATILERNLNERYKKWQRFRLSISRRSDQYFNIFLSKKGYTGSLTFDHQNGKLDINVELQKALPSNQNGTAKG--DTKGLSGGERSFSTVSLLLAFWENMECPFRAMDEFDVFMDEVNRSISINLLMSKAEENRSKQYIFVTP 1153
BLAST of structural maintenance of chromosomes protein 6 vs. SwissProt
Match: gi|1179881438|sp|G5EG17.1|SMC6_CAEEL (RecName: Full=Structural maintenance of chromosomes protein 6 homolog smc-6) HSP 1 Score: 179.104 bits (453), Expect = 2.323e-44 Identity = 274/1172 (23.38%), Postives = 506/1172 (43.17%), Query Frame = 0 Query: 101 SGVLKEIRLTNFMNHASLHLRLDDGIN---LLSGRNGSGKSSILQAIVLGLGGQAKDTKRSTSSRSFVRNDCLKAEIRVRVWNGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGKVV----HTDKIADDEK---KKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRATLLKPLQQMYENAKHDLIVCSETLAEKRDNVKEAEAHWMEIQEKVTKIKRVDEEIKKTAMDLEKQILWGYVQ--SKEIKLKELKNHVQ-TLSEKKAKEEAIVAESLKSIEVLLEQERESEKVKRMTEAEVKAITMDYNRAKEEQVEAKGKLDLVVMDLETKSTTLSVLREQERSLANSVRSKKTM-KDRKNAERDRHACEMKRKKDQVKEDIIKINHSIQD-------------KGKLRDSLSTCLQKLDQDEKDVRAEKLDAQRHQRTLEEDLFNLARS---NQSSLKRFGAEFEHLAQDISESRD-FKTPPIGPIGSHIRLVGQASEDKNLADLLETELTKGFLRSFLVATWADSKALSKIF-GRHFRGRKPPSIVIWQFRGKKDDIRRGQVQTH---SEMPGILDYLEIANPEVFNYVVDFKRIET-TLVLSQTMAQDLFSEAKNVPRNAAKAITPDF-----------YRFIPA----TKGNYASYFMERPRGHLNTLVADTRSNQATLEAELAKNKADIATADKALKKVQLDKADIASKKDEAVKTITTMNLKLGTLK-QDLTE--------VNLALTNQSE-----GDTIPEMETKLKSLRREIQEAESNVQGLKMRKGASVLQER--AAKTI---------LAQQTSKMNEAAQALTDGGLSEIKANIAQKQKEVNRNKTNLGKVVAEIKSQTAKAVEAERDFENTKRDAKVKT-RTEITNVVDRAQLAAHQKELE-----VRKRQMAAEFDMT---PKEMQEKVSRKKKIYVTLKKQLEAVEVNFHKIEAMQEVRKNVFVGIRQSLIRSVRTIF--IMRMQDHGLLGNLEVSHTRKTLNIKVSHLRGSQEPKAEDALP--------------------------------------------LSSLSGGERSKTLVCLMIASWEYMAPPFRCLDEWDVYLDERSRSMIEEVLFSYAKSKDF---QYILISPQGSTLKGANIV 1138 SG + ++LTNFM HA+L + N + G NGSGKS++ AI LGLGG+ D R + +S++++ +++I + + N G + P+ + I+ ER I ++S S +++K S KV H ++I +K +I SI L+NP + Q+ ++ F N ++Y ++ +T L+ ++ Y L C + K + + +QE+ ++D++ + ++L+ V+ + +I+L K Q TL ++ KE A + +E +++ R+ +V+ AE + E ++AK + V++ E K +RE E+S+ KK M + NA+ + K+ + + + K+ + +D KLR+ L T + + E++ + D + +R +E+D+ + RS + ++ +FG+ + +I+ S+ F+T P GP+G +I L+ D A +E E +FL ++ D++ L IF + P+I++ + G R H S+ I L+ ++P+V N ++D E L+ +T A +L + P+NA KA T D YRF +G + + + G L L+ DT+S LE + D+ D LK I +++D+ I + KL L+ Q+L + LA T + ++I EM+ K+ + E+++ NV + A V+QER A T+ A ++ K+ D G EI + + +V ++ A++KS+ A+E EN K++ + T+ ++ Q+++E V + + + +T K+ ++K+ R K L + +E V + + A R + +++ V F ++ ++ H +G LE H ++TLN+ V Q K +DA+ L LSGGERS L+++ WE M PFR +DE+DV++D +R ++ ++L A +K F Q+I +PQG +K N+V Sbjct: 44 SGRVASVKLTNFMCHANLQIDFKTAQNNCFYIGGPNGSGKSALFAAINLGLGGRGSDNDRGNTVKSYIKDGTTQSKITITLTNAGLNAH-PD-FDDLISIERTINQAS--STYIMK--SVKVTSSDNHVERIVSRKKADVDRIVSRFSIHLSNPAFWMSQDRSRSFLANFKPANVYKLYLESTNLENIRLSYIRFADALDECFALIQLKAGEILNEQKKLKRMQEQRDLQAKLDQD-RALVASFCWKLLFCKVRDYNDQIELTLKKQEAQKTLQDETKKEYAKNRAARTEVEKKIQEFRDEVEVQDAEIAEAR-----------EDLDAKKR---KVLEFEEK------IRECEQSIRKKTSEKKYMERTIVNAKNEVRILLEKQGNQDLTKRLTKVENDYKDISQQRENMELGGESAKLREKLDTVITDYKRKEEEKYTIQRDINQLRRKIEQDMETMRRSRATKKDAINKFGSHMAEILMEINRSKSRFQTVPKGPLGKYITLI-----DPKWAFTVE-ECIGNLANNFLCSSHLDAEILRNIFQSLRIPAQDRPTIIVAKCNG------RAYTNLHEPSSDFKSIYRVLKFSDPDVHNVIIDKSNCEQFILIEDKTEAMELMG-SNYPPQNAVKAYTLDGSQAYANGPNSQYRFYSGRGGHARGTFGNDQGDVDEGALARLIEDTKSEAMRLETQ------DLRKQDHELKV-------IYNERDQTKAAIDEFDRKLSNLRSQELQKERQAKDLRAELAQTANEDQVENLNESIEEMQKKIPLIEDEVKDILKNVADITA-DMAPVIQERKEAEHTLAEIQKETRDFASKSQKLQNELSKYDDAG--EI---LKIRLDKVKADEGVFFHTEAKLKSERDDAMEM---VENDKKNHPMPPGETDPPDLSSFPSTTEAQRKIEEMQKAVDRATVGCDTTITLECVKDFKDKLKRLK----YLCRMIEDVLIELKNLHA---ARVKAYPSLKKFTELKVCNKFQELLAVRGH-FIGGLEFDHEKETLNVNV------QSSKEKDAMAGRRPEVLEVEEVDEHSYDDDSDDSTGPRRKKSKKSGQKKKRVRDLKGLSGGERSFVTAALVMSLWEVMEQPFRMMDEFDVFMDMMNRKLVMDLLVELA-TKKFPHNQFIFFTPQG--IKELNMV 1136
BLAST of structural maintenance of chromosomes protein 6 vs. SwissProt
Match: gi|2500793|sp|Q12749.1|SMC6_YEAST (RecName: Full=Structural maintenance of chromosomes protein 6; AltName: Full=DNA repair protein RHC18; AltName: Full=Rad18 homolog) HSP 1 Score: 172.555 bits (436), Expect = 2.132e-42 Identity = 156/598 (26.09%), Postives = 291/598 (48.66%), Query Frame = 0 Query: 101 SGVLKEIRLTNFMNHASLHLRLDDGINLLSGRNGSGKSSILQAIVLGLGGQAKDTKRSTSSRSFVRNDCLKAEIRVRVWNGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGKVVHTDKIADDEKKKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRATLLKPLQQ--MYENAKHDLIVCSETLAEKRDNVKEAEAHWMEIQEKVTKIKRVDEEIKKTAMDLEKQILWGYVQSKEIKLKELKNHVQTLSEKKAKEEAIVAESLKSIEVLLEQERESEKVKRMT------EAEVKAITMDYNRAKEEQVEAKGKLDLVVMDLETKSTTLSVLREQERSLANSVRSKKTMKDRKNAERDRHAC-EMKRKKDQVKEDIIKINHSIQDKGKLRDSLSTCLQKLDQDEKDVRAEKLDAQRH-QRTLEE---DLFNLARSNQSSLKRFGAEFEHLAQDISESRD-FKTPPIGPIGSHIRL-VGQASEDKNLADLLETELTKGFLRSFLVATWADSKALSKIFGRHFRGRKPPSIVIW---QFRGKKDDIRRGQVQTHSEMPGILDYLEIANPEVFNYVVDFKRIETTLVL 680 SG +K++ L NFM H L L +N + G NGSGKS+IL AI +GLG +A +T R +S + +R C A+I + + N Y+ ++G EI ER+I K G + L+ E+GK + K + + + ++ S+ ++NP+ L Q+ A+ F T +T Y F++ TLL+ + + +Y +A HD E +A +N+K +A + + ++ + ++ + ++ + M L+ + LW V K L+N + + +K + V E +++ EK++R T EA++ A + N E A+ L V E + + + + +S + R K ++ A + EM KDQ+++++ ++ + + ++ +SL LQ + +E+D++ E+ R R+++ +L N+A+ N + L F + L + I + ++ F+TP IGP+GS + + G +++ + + L +F+V+ D++ I R R IV + QF D +G+ H P I+D LE + PE+ VD RIE +++ Sbjct: 79 SGYIKKVILRNFMCHEHFELELGSRLNFIVGNNGSGKSAILTAITIGLGAKASETNRGSSLKDLIREGCYSAKIILHLDNSKYGAYQQGIFGNEIIVERII-KRDGPASFSLRSENGKEISNKK---KDIQTVVDYFSVPVSNPMCFLSQDAARSFLTASTSQDKYSHFMKGTLLQEITENLLYASAIHD--SAQENMALHLENLKSLKAEYEDAKKLLRELNQT-SDLNERKMLLQAKSLWIDVAHNTDACKNLENEISGIQQKVDE----VTEKIRN---------RQEKIERYTSDGTTIEAQIDAKVIYVNEKDSEHQNARELLRDVKSRFEKEKSN----QAEAQSNIDQGRKKVDALNKTIAHLEEELTKEMGGDKDQMRQELEQLEKANEKLREVNNSLVVSLQDVKNEERDIQHERESELRTISRSIQNKKVELQNIAKGNDTFLMNFDRNMDRLLRTIEQRKNEFETPAIGPLGSLVTIRKGFEKWTRSIQRAISSSLN-----AFVVSNPKDNRLFRDIM-RSCGIRSNIPIVTYCLSQF-----DYSKGRA--HGNYPTIVDALEFSKPEIECLFVDLSRIERIVLI 639
BLAST of structural maintenance of chromosomes protein 6 vs. SwissProt
Match: gi|75171524|sp|Q9FLR5.1|SMC6A_ARATH (RecName: Full=Structural maintenance of chromosomes protein 6A) HSP 1 Score: 70.8626 bits (172), Expect = 5.631e-11 Identity = 46/173 (26.59%), Postives = 89/173 (51.45%), Query Frame = 0 Query: 964 EMQEKVSRKKKIYVTLKKQL----EAVEVNFHKIEAMQEVRKNVFVGIRQSLIRSVRTIFIMRMQDHGLLGNLEVSHTRKTLNIKVSHLRGSQEPKAEDALPLSSLSGGERSKTLVCLMIASWEYMAPPFRCLDEWDVYLDERSRSMIEEVLFSYAKSKDFQYILISPQGSTL 1132 E ++K+ +K+K Y + +++L +AV+ ++K++ +++ K R + F + G+ GN+ VS+ KTL+I+V + + D LSGGERS + +C +A P R +DE+DV++D SR + + L +A + Q++ I+P ++ Sbjct: 883 EKEQKIGKKRKTYKSCREKLKVCKDAVDSRWNKLQRNKDLLK-----------RELTWQFNHHLGKKGISGNIRVSYEDKTLSIEVKMPQDATNSAVRDT---RGLSGGERSFSTLCFTLALQNMTEAPIRAMDEFDVFMDAVSRKISLDTLIDFALKQGSQWMFITPHDISM 1041
BLAST of structural maintenance of chromosomes protein 6 vs. nr
Match: gi|1325301952|ref|XP_023332517.1| (structural maintenance of chromosomes protein 6-like [Eurytemora affinis]) HSP 1 Score: 367.081 bits (941), Expect = 2.189e-105 Identity = 307/1062 (28.91%), Postives = 535/1062 (50.38%), Query Frame = 0 Query: 102 GVLKEIRLTNFMNHASLHLRLDDGINLLSGRNGSGKSSILQAIVLGLGGQAKDTKRSTSSRSFVRNDCLKAEIRVRVWNGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGK-VVHTDKIADDEKKKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRATLLKPLQQMYENAKHDLIVCSETLAEKRDNVKEAEAHWMEIQEKVTKIKRVDEEIKKTAMDLEKQILWGYVQSKEIKLKELKNHVQTLSEKKAKEEAIVAESLKSIEVLLEQERESEKVKRMTEAEV--KAITMDYNRAKEEQVEAKGKLDLVVMDLETKSTTLSVLREQERSLANSVRSKKTMKDRKNAERDRHACEMKRKKDQVKEDII--------KINHSIQDKGKLRDSLSTCLQKLDQD-EKDVRAEK-LDAQRHQRT-LEEDLFNLARSNQSSLKRFGAEFEHLAQDISESRDFKTPPIGPIGSHIRLVGQASEDKNLADLLETELTKGFLRSFLVATWADSKALSKIFGRHF--RGRKPPSIVIWQFRGKKDDIRRGQVQTHSEMPGILDYLEIANPEVFNYVVDFKRIETTLVL-SQTMAQDLFSEAKNVPRNAAKAITPDFYRFIPATK-GNYASYFMERP------RGHLNTLVADTRSNQATLEAELAKNKADIATADKALKKVQLDKADIASKKDEAVKTITTMNLKLGTLKQDLTEVNLALTNQS-EGDTIPEMETKLKSLRREIQEAESNVQGLKMRKGASVLQERAAKTILAQQTSKMNEAAQALTD--GGLSEIKANIAQKQKEVNRNKTNLGKVVAEIKSQTAKAVEAERDFENTKRDAKVKTRTEITNVVDRAQLAAHQKELEVRKRQMAAEFDMTPKEMQEKVSRKKKIYVTLKKQLEAVEVNFHKIEAMQEVRKNVFVGIRQSLIRSVRTIF-IMRMQDHGLLGN---LEVSHTRKTLNIKVSHLRGSQEPKAEDALPLSSLSGGERSKTLVCLMIASWEYMAPPFRCLDEWDVYLDERSRSMIEEVLFSYA-KSKDFQYILISPQGST 1131 G+++ IRL NFM H + +N ++G NGSGKSS+LQ +VLGL G++K KR + FV+ DC KA I+V + N G Y+PE+YG + F+R I +G S ++LKDE+ K VV K A DE K+I + IQ+++PI ILQQ+EAK + H LY FF +ATL+K Y A+ + + L EK ++++ A + + + + +IK +E+ M + + W V + + EL+ +++ L+E + E L S LL +EK R TE V + + + +++ ++ K +LD + DL+ +++L + SLA +R ++D+ N +R ++K+Q + I+ + I +G R++ K+ QD EK + EK + +R +R L+ +L L +++ L FGA+ + + I S F+ P+GP+G++++L G+A+ + L+ETE+++ L ++L D + L +IF + GR P I +F ++RR + P ++DY+++ +P VFN++VD K IE+ LV +Q A+ L + +VP A AIT DFYRF PA + +Y SY++E P R + LV + R L L + + A K+ K + +K ++ K + ++ ++ +K + N+S +GD+ + +L++ + E+ +E ++ + + ++ R + + ++NE + L +++ I+ K KE+ + + K+ +EI+S A E + + AK T+ E+ QL A K ++++K+ + + + E+ + ++ Y LKK +E + + + M+ R + IR + SVR F +M + G+ L + H +K L GS +SSLSGGE+S T +CL+ A W+ M PPFRCLDEWDV+LD +R I + L +++ +KD Q+I ISPQG+ Sbjct: 51 GIIERIRLENFMCHTEFLWEPNPCVNFVTGNNGSGKSSVLQGLVLGLMGESKHIKRYSKISEFVKKDCSKAVIQVTLRNTGEDAYKPEIYGSSLTFQRTI-TDAGSSSYLLKDENMKDVVRKSKDAKDECKRILDKFQIQVDSPIVILQQDEAKELLKIESPHQLYRFFEKATLIKQCFDEYSEAQAEYTKVQDNLKEKNKSLRQLTAEYKKSKIRYEEIK-ASQEMNGELMVAKGEYAWVRVHAARKNIIELQENIKKLTEMMEQHR----ERLMSAHELL-----AEKKLRKTEMSVCLEDESNKFGAQEQDLIKLKEELDKLKQDLKELNSSLKSETNNKNSLAQEIR---VLQDQINFLGERETKGELQRKEQRRVAILANLEEEKKNLEEKINQEGMTREAQDL---KIKQDQEKILLIEKEIKNKRERRAMLQRELDELQGASEQHLAVFGAKIPLVDKAIKRSNQFRHTPVGPVGAYVKLTGEAATQPEVGRLVETEISRAHLTAYLTNDDHDRRVLMRIFDDVYGSDGRNKPRIFTSKFFAVNHNVRRPRCSE----PVLIDYIQVESPVVFNHLVDQKSIESILVCRTQDRAKALMTRRADVPEGVAYAITHDFYRFFPARENASYRSYYIEIPLGSGMLRATMLNLVEERRDEMNGLNEHLGDMEVEKAEVFKSQKSFEAEKRRAMTEIQRLRKEVANISSQISKVKSE---------NESGDGDS-ENLRARLRTRQTELAVSEEKIEEILSDRESTTRLLREKEGSFKENKKQLNELKTSTNPITRELRVLESEISSKTKEMLNQEKLIKKIKSEIESLKADIKRNEEEEKQFSVAAKKITKKELNPDKSLKQLNA--KIVQLKKKLAMKQENQDVEVFVEEFNHLREKYSKLKKNIENLNEHLEVVAKMKNDRSENIMWIRTMITNSVRRRFNLMIKKFSACTGSEIFLRIDHVKKELRFVFKTENGSHTNS-----DVSSLSGGEKSYTQMCLICALWDMMQPPFRCLDEWDVFLDAVNRKEISKELLNFSLNNKDRQFIFISPQGAC 1074
BLAST of structural maintenance of chromosomes protein 6 vs. nr
Match: gi|1207963503|ref|XP_021372193.1| (structural maintenance of chromosomes protein 6-like [Mizuhopecten yessoensis]) HSP 1 Score: 308.531 bits (789), Expect = 1.704e-84 Identity = 282/1072 (26.31%), Postives = 517/1072 (48.23%), Query Frame = 0 Query: 102 GVLKEIRLTNFMNHASLHLRLDDGINLLSGRNGSGKSSILQAIVLGLGGQAKDTKRSTSSRSFVRNDCLKAEIRVRVWNGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGKVVHTDKIADDEKKKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRATLLKPLQQMYENAKHDLIVCSETLAEKRDNVKEAEAH---WMEIQEKVTKIKRVDEEIKKTAMDLEKQILWGYVQSKEIKLKELKNHVQTLSEKKAKEEAIVAESLKSIEVLLEQERE-SEKVKRMTEAEVKAITMDYNRAKEEQVEAKGKLDLVVMDLETKSTTLSVLREQERSLANSVRS-KKTMKDRKNAERDRHACEMKRKKDQVKEDIIKINHSIQDKGKLRDSLSTCLQKLDQDEKDVRAEKLDAQRHQRTLEEDLFNLARSNQSSLKRFGAEFEHLAQDISE---SRDFKTPPIGPIGSHIRLVGQASEDKNLADLLETELTKGFLRSFLVATWADSKALSKIFGRHFRGRKPPSIVIWQFRGKKDDIRRGQVQTHSEMPGILDYLEIANPEVFNYVVDFKRIETTLVLSQT-MAQDLFSEAK--NVPRNAAKAITPDFYRFIPATKGNYASYFMERPRGHLNTLVADTRSNQATLEAELAKNKADIATADKALKKVQLDKADIASKKDEAVKTITTMNLKLGTLKQDLTEVNLALTNQSEGDTIPEMETKLKSLRREIQEAESNVQGLKMRKGASVLQERAAKTILAQQTSKMNEAAQALTD--GGLSEIKANIAQKQKEVNRNKTNLGKVVAEIKSQTAKAVEAERDFENTKRDAKVKTRTEITNVVDR-AQLAAHQKELEVRKRQMAAEFDM------TPKEMQEKVSRKKKIYVTLKKQLEAVEVNFHKIEAMQEVRKNVFVGIRQSLIRSVRTIFIMRMQDHGLLGNLEVSHTRKTLNIKVSHLRGSQEPKAED---ALPLSSLSGGERSKTLVCLMIASWEYMAPPFRCLDEWDVYLDERSRSMIEEVLFSYAKSK-DFQYILISPQ-----GSTLKGANIVQIGRGD 1144 G++++I L NFM H L + L +N L GRNGSGKS+++ A+V+GLGG+A T R + +SF++ AE+ +++ N G Y+ E YG I ER + G S + LK E G+V+ + ++ I + +IQ++NP+SIL Q+ ++ F + + H Y FF++AT L+ ++ Y A + E + +K ++ E W + + +T IK + +IK +L+ + W +V KE L+ L +Q + K V E+ ++ ++++++ E++K M++ EV+ + Y+ AK+E E KG DL+ + L +++ L ++ +K+ + +ER ++KRK+D+V + ++ + + + R ++S + Q+E ++ E+ + R +++DL NL + + +++RFGA L Q I E F P+GPIGS +L D A +E L + +F D L KIF R+ PSI++ F+ +K ++ RG+V T ++ ++D LEI +P FN ++D + +E L++ +A+D+ K P+ +A T D + Y S R R L+T V + S + EL + +IAT D+ K +I S K E+ KT T + K+G + LT+ L + + + + +++L E+Q +Q + ++ + K L K E + G +K + Q E+ ++K++ ++K Q K ++ +R E +++ + T T+ + R A + + LE Q+ + P E+ + KK Y ++ +++ + +E + R+ + R+ + + FI+ + + G + +H R+TL+I V +P D A + SLSGGERS + VC ++A W+ M PFRCLDE+DV++D +R + +++ AK + Q+I ++PQ G +KG NI ++ D Sbjct: 53 GIVEKINLRNFMCHHRLDITLGPHVNFLMGRNGSGKSAVITALVVGLGGKANVTSRGNTIKSFIKTGKQTAEVMIKLRNRGPDAYKHEEYGNSIIVERKFARDGG-SHYRLKSEDGRVISQKR---EDLTYILDQFNIQVDNPVSILNQDTSRNFLNSKSPHDKYKFFLKATQLEQMKMDYSMANEQKEITREIIEKKEQSLPILEREVLDWEQKYKSLTAIKELQNKIK----ELKDSMAWAFVMEKERGLQPLTKELQQEESRLPKFIQKVDEAKTKVDKCVQRQKDIQEQLKTMSD-EVQDLKPTYDSAKKEVNEKKGVARNSQNDLKKVESYLRKVQKDRTLLQEKIKEIQKSAQRDYESERKTRESKIKRKEDEVDDWKAQLATTEHQQAQYRSAIS----QAKQNEYTLQTEQQTIETRARQIKKDLQNLCEAKKDNIRRFGAYMPTLLQHIEERCRRHQFHRRPVGPIGSCFKLT-----DMEWAFAVERCLG-NLIHAFCCHDHHDEAILEKIFDDVCPERQRPSIIVSAFKDQKHNVSRGRV-TGTQYKAVVDVLEITDPVTFNCLIDQRGVECILLIKDNRIARDVMDPDKRPGPPKFCREAFTADGDQLYCHPSLRYYSSRGGRAR-FLSTNVEEEISRH---KEELQSLENEIATIDRQRDKF---TREIHSNKVESNKTETQLT-KIGHKVRILTDEIQDLKSIEDPEPV-----DVETLEEEVQTMNDQIQIHEEQRADKNQKHEQCKQELEHVEKKFKEVEHQMRSMAEGADPLKDELGHAQNEIEQSKSHKKHYEQKLKEQERKVIDQKRKVEMLQKEIENDT-TKAQQICPRKANMRRSVQNLESEINQITKRIKVEEKSHGNPTEITKTYFEKKGSYKKIRDEVKQFKRFMDHLEKVMVQRQQQYSEFRKLIALRAKYFFIILLSNRKYNGKMTFNHPRETLDISV-------QPNTSDGDGAKDMRSLSGGERSFSTVCFILALWDAMESPFRCLDEFDVFMDMVNRRISMDLMLKVAKQQLHRQFIFLTPQNMSELGIKMKGLNIFRMPDPD 1083
BLAST of structural maintenance of chromosomes protein 6 vs. nr
Match: gi|1205890595|gb|OWF41408.1| (Structural maintenance of chromosomes protein 6 [Mizuhopecten yessoensis]) HSP 1 Score: 294.664 bits (753), Expect = 1.020e-79 Identity = 278/1072 (25.93%), Postives = 509/1072 (47.48%), Query Frame = 0 Query: 102 GVLKEIRLTNFMNHASLHLRLDDGINLLSGRNGSGKSSILQAIVLGLGGQAKDTKRSTSSRSFVRNDCLKAEIRVRVWNGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGKVVHTDKIADDEKKKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRATLLKPLQQMYENAKHDLIVCSETLAEKRDNVKEAEAH---WMEIQEKVTKIKRVDEEIKKTAMDLEKQILWGYVQSKEIKLKELKNHVQTLSEKKAKEEAIVAESLKSIEVLLEQERE-SEKVKRMTEAEVKAITMDYNRAKEEQVEAKGKLDLVVMDLETKSTTLSVLREQERSLANSVRS-KKTMKDRKNAERDRHACEMKRKKDQVKEDIIKINHSIQDKGKLRDSLSTCLQKLDQDEKDVRAEKLDAQRHQRTLEEDLFNLARSNQSSLKRFGAEFEHLAQDISE---SRDFKTPPIGPIGSHIRLVGQASEDKNLADLLETELTKGFLRSFLVATWADSKALSKIFGRHFRGRKPPSIVIWQFRGKKDDIRRGQVQTHSEMPGILDYLEIANPEVFNYVVDFKRIETTLVLSQT-MAQDLFSEAK--NVPRNAAKAITPDFYRFIPATKGNYASYFMERPRGHLNTLVADTRSNQATLEAELAKNKADIATADKALKKVQLDKADIASKKDEAVKTITTMNLKLGTLKQDLTEVNLALTNQSEGDTIPEMETKLKSLRREIQEAESNVQGLKMRKGASVLQERAAKTILAQQTSKMNEAAQALTD--GGLSEIKANIAQKQKEVNRNKTNLGKVVAEIKSQTAKAVEAERDFENTKRDAKVKTRTEITNVVDR-AQLAAHQKELEVRKRQMAAEFDM------TPKEMQEKVSRKKKIYVTLKKQLEAVEVNFHKIEAMQEVRKNVFVGIRQSLIRSVRTIFIMRMQDHGLLGNLEVSHTRKTLNIKVSHLRGSQEPKAED---ALPLSSLSGGERSKTLVCLMIASWEYMAPPFRCLDEWDVYLDERSRSMIEEVLFSYAKSK-DFQYILISPQ-----GSTLKGANIVQIGRGD 1144 G++++I L NFM H L + L +N L GRNGSGKS+++ A+V+GLGG+A T R + +SF++ AE+ +++ N G Y+ E YG I ER + G S + LK E G+V+ + ++ I + +IQ++NP+SIL Q+ ++ F + + H Y FF++AT L+ ++ Y A + E + +K ++ E W + + +T IK + +IK +L+ + W +V KE L+ L +Q + K V E+ ++ ++++++ E++K M++ EV+ + Y+ AK+E E KG DL+ + L +++ L ++ +K+ + +ER ++KRK+D+V + ++ + + + R ++S + Q+E ++ E+ + R +++DL NL + + +++RFGA L Q I E F P+GPIGS +L D A +E L + +F D L KIF R+ PSI++ F+ T ++ ++D LEI +P FN ++D + +E L++ +A+D+ K P+ +A T D + Y S R R L+T V + S + EL + +IAT D+ K +I S K E+ KT T + K+G + LT+ L + + + + +++L E+Q +Q + ++ + K L K E + G +K + Q E+ ++K++ ++K Q K ++ +R E +++ + T T+ + R A + + LE Q+ + P E+ + KK Y ++ +++ + +E + R+ + R+ + + FI+ + + G + +H R+TL+I V +P D A + SLSGGERS + VC ++A W+ M PFRCLDE+DV++D +R + +++ AK + Q+I ++PQ G +KG NI ++ D Sbjct: 53 GIVEKINLRNFMCHHRLDITLGPHVNFLMGRNGSGKSAVITALVVGLGGKANVTSRGNTIKSFIKTGKQTAEVMIKLRNRGPDAYKHEEYGNSIIVERKFARDGG-SHYRLKSEDGRVISQKR---EDLTYILDQFNIQVDNPVSILNQDTSRNFLNSKSPHDKYKFFLKATQLEQMKMDYSMANEQKEITREIIEKKEQSLPILEREVLDWEQKYKSLTAIKELQNKIK----ELKDSMAWAFVMEKERGLQPLTKELQQEESRLPKFIQKVDEAKTKVDKCVQRQKDIQEQLKTMSD-EVQDLKPTYDSAKKEVNEKKGVARNSQNDLKKVESYLRKVQKDRTLLQEKIKEIQKSAQRDYESERKTRESKIKRKEDEVDDWKAQLATTEHQQAQYRSAIS----QAKQNEYTLQTEQQTIETRARQIKKDLQNLCEAKKDNIRRFGAYMPTLLQHIEERCRRHQFHRRPVGPIGSCFKLT-----DMEWAFAVERCLG-NLIHAFCCHDHHDEAILEKIFDDVCPERQRPSIIVSAFKRV----------TGTQYKAVVDVLEITDPVTFNCLIDQRGVECILLIKDNRIARDVMDPDKRPGPPKFCREAFTADGDQLYCHPSLRYYSSRGGRAR-FLSTNVEEEISRH---KEELQSLENEIATIDRQRDKF---TREIHSNKVESNKTETQLT-KIGHKVRILTDEIQDLKSIEDPEPV-----DVETLEEEVQTMNDQIQIHEEQRADKNQKHEQCKQELEHVEKKFKEVEHQMRSMAEGADPLKDELGHAQNEIEQSKSHKKHYEQKLKEQERKVIDQKRKVEMLQKEIENDT-TKAQQICPRKANMRRSVQNLESEINQITKRIKVEEKSHGNPTEITKTYFEKKGSYKKIRDEVKQFKRFMDHLEKVMVQRQQQYSEFRKLIALRAKYFFIILLSNRKYNGKMTFNHPRETLDISV-------QPNTSDGDGAKDMRSLSGGERSFSTVCFILALWDAMESPFRCLDEFDVFMDMVNRRISMDLMLKVAKQQLHRQFIFLTPQNMSELGIKMKGLNIFRMPDPD 1074
BLAST of structural maintenance of chromosomes protein 6 vs. nr
Match: gi|762160125|ref|XP_011418272.1| (PREDICTED: structural maintenance of chromosomes protein 6 isoform X2 [Crassostrea gigas]) HSP 1 Score: 294.278 bits (752), Expect = 1.535e-79 Identity = 288/1093 (26.35%), Postives = 517/1093 (47.30%), Query Frame = 0 Query: 82 EDESGLNSSARSCLDQTVRS---GVLKEIRLTNFMNHASLHLRLDDGINLLSGRNGSGKSSILQAIVLGLGGQAKDTKRSTSSRSFVRNDCLKAEIRVRVWNGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGKVVHTDKIADDEKKKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRATLLKPLQQMYENAKHDLIVCSETLAEKRDNVKEAEAHWMEIQEKVTKIKRVDEEIKKTAMDLEKQIL-WGYVQSKEIKLKELKNHVQTLSEKKAKEEAIVAESLKSIEVLLEQERESEKVKRMTEAEVKAITMDYNRAKEEQVEAKGKLDLVVMDLETKSTTLSVLREQERSLANSVRSKKTMKDRKNAERDRHACEMKRKKDQVKEDIIKINHSIQDKGKLRDSLSTCLQKLDQDEKDVRAEKLDAQRHQRTLEEDLFNLARSNQSSLKRFGAEFEHLAQDISESR---DFKTPPIGPIGSHIRLVGQASEDKNLADLLETELTKGFLRSFLVATWADSKALSKIFGRHFRGRKPPSIVIWQFRGKKDDIRRGQVQTHSE-MPGILDYLEIANPEVFNYVVDFKRIETTLVLSQTMAQDLFSEAKNV--------PRNAAKAIT--PDFYRFIPATKGNYASYFMERPRGHLNTLVADTRSNQATLEAELAKNKADIATADKALKKVQLDKADIASKKDEAVKTITTMNLKLGTLKQDLTEVNLALTN-QSEGDTIP----EMETKLKSLRREIQEAESNVQGLKMRKGASVLQERAAKTILAQQTSKMNEAAQA---LTDG-GLSEIKANIAQKQKEVNRNKTNLGKVVAEIKSQTAKAVEAERDFENTKRDA------KVKTRTEITNVVDRAQLAAHQKELEVRKRQMAAEFDMT---PKEMQEKVSRKKKIYVTLKKQLEAVEVNFHKIEAMQEVRKNVFVGIRQSLIRSVRTIFIMRMQDHGLLGNLEVSHTRKTLNIKVSHLRGSQEPKAEDALPLSSLSGGERSKTLVCLMIASWEYMAPPFRCLDEWDVYLDERSRSMIEEVLFSYAKS-KDFQYILISPQGSTLKGANI 1137 EDE +N + R+ D + G++++I L NFM H+ L + L +N + GRNGSGKS+I+ A+V+GLGG+A T R ++ + F++ AE+ + + N G ++ YG +I ER + G S + LK + GKVV T + +E I + +IQ++NP++IL Q+ ++ F + + H Y FF++AT L+ + Y A + E + +K+ + E ++ ++K + +DE K M+ KQ L W +V S+E L++++ +Q + K + V E+ +E +++ E +++ R T EVK + ++ AKE EAK L + K + L L +ER N+ + + + E +R A E K Q + + +K + + ++ + K +E+ ++ + + H+ ++ L +L + L RFG L Q I E +F P GP+G+ +L ++ A +E L L+SF D K L +F R R+ PSI++ +F+G DI R ++ HSE P + D ++ +P V N ++D + IE L++ EA+ V PRN +A T D +P+ + + H L ++T + L+ EL + + +I + +V++ D + K T +K+G Q L ++N + +S D P +E ++ +L +I E + L + ++ Q +A + + SKM E A+ L D GL+++ +I Q + + L + A+IK + +K E + E+ + A ++ TR I N+ + Q + E + R A E T ++M K+ + K + +QLE V + H+ + E RK + +R + FI+ + + G + +H+++TL + V + E A + SLSGGERS + VC ++A W+ M PFRCLDE+DV++D +R + +++ A++ K Q+I ++PQ + G I Sbjct: 31 EDEDEMNLTQRADFDINSKEADIGIIEKICLKNFMCHSRLDVSLGPHVNFIVGRNGSGKSAIITALVVGLGGKASVTSRGSTIKGFIKTGKYNAEVEIHLRNRGPDAFKASTYGDKIIVERK-FTHDGSSSYKLKSKEGKVVSTKR---EELNAILDQFNIQVDNPVAILNQDTSRNFLNSKSPHDRYKFFLKATQLEQMLLDYTRANEQREITKEIIEKKQQTLPTLEKEVLDWEQKFKSLTALDE--LKGKMEKRKQELAWAFVISRERDLQQMQKCLQQEESRIPKFKQKVEEAKAKVETCIQKHNELKELLRTTNEEVKLLRPQFDAAKETLKEAKADLRNRQNEFRKKESELRKL-AKERDDINARIQELHKSAQHDYEAERRAREEKIGNLQEQANALKAQQTTTEHD--LENFRAAVTKHKGEERQMQMDVNSMKSHEDKRKKQLNDLLSAKNDRLARFGPYMPTLLQHIEERYRRGEFHQKPRGPLGACFKL-----KEPKWAMGVERCLG-ALLQSFCCHDHHDEKVLESVFDRVCNDRQRPSIIVSRFKGSVYDISR--LRAHSERFPAVFDMIDCNDPVVMNTLIDQRGIENILLIEDK------KEARTVMDPDVQAQPRNCHEAFTIEGDQVHSVPSLR------YYSNNNTHARFLTSNTEQDIHRLQGELTQLRQEIQKKE----QVKVTVRDNLRQNQSEEKKCETQLMKIG---QRLNKLNNEIYELKSVEDPAPIDVTTLEEEVSNLETQITEMSAVRDELHTQYQEALSQFQAEEQKFKEVESKMREKAEVGEPLKDEFGLAQV--DIEQAKSHRKHYEQKLSEQEAKIKEEQSKVEEESKVLESDVKKAQQICAERMNTRRSIQNLESEITQISKQIKAEEKSRGNAEEITRTFHEKRDMYRKIVTEVKQCRSFIQQLEKVMI--HRQQQYSEFRK--LIAMR------AKYFFIVLLSNRNYTGKMSFNHSKETLEMNVQ----PTSSEGEGAKDMRSLSGGERSFSTVCFILALWDAMESPFRCLDEFDVFMDMVNRRISMDMMMVVARNQKHKQFIFLTPQNMSKLGIEI 1071
BLAST of structural maintenance of chromosomes protein 6 vs. nr
Match: gi|1339061056|ref|XP_023719127.1| (structural maintenance of chromosomes protein 6 [Cryptotermes secundus] >gi|1330889156|gb|PNF21803.1| Structural maintenance of chromosomes protein 6 [Cryptotermes secundus] >gi|1330889157|gb|PNF21804.1| Structural maintenance of chromosomes protein 6 [Cryptotermes secundus]) HSP 1 Score: 286.189 bits (731), Expect = 9.966e-77 Identity = 302/1119 (26.99%), Postives = 523/1119 (46.74%), Query Frame = 0 Query: 82 EDESGLNSSARSCLDQTVRSGVLKEIRLTNFMNHASLHLRLDDGINLLSGRNGSGKSSILQAIVLGLGGQAKDTKRSTSSRSFVRNDCLKAEIRVRVWNGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGKVVHTDKIADDEKKKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRATLLKPLQQMYENAKHDLIVCSETLAEKRDNVKEAEAHWMEIQEKVTKIKRVDEEIKKTAMDLEKQILWGYVQSKEIKLKELKNHVQTLSEKKAKEEAIVAESLKSIEV-----LLEQERE---SEKVKRMTEAEVKAITMDYNRAKEEQVEAKGKLDLVVMDLETKSTTLSVLREQERSLANSVRSKKTMKDRKNAERDRHAC----EMKRKKDQVKEDIIKIN--HSIQDKGKLRDSLSTCLQKLDQDEKDVRAEKLDAQRHQRTLEEDLFNLARSNQSSLKRFGAEFEHLAQDISES---RDFKTPPIGPIGSHIRLVGQASEDKNLADLLETELTKGFLRSFLVATWADSKALSKIFGRHFRGRKPPSIVIWQFRGKKDDIRRGQVQTHSEMPGILDYLEIANPEVFNYVVDFKRIETTLVLSQTM-AQDLFSEAKNVPRNAAKAITPDFYRFIPATKGNYASYFMERPRGHLNT----LVADTRSNQATLEAELAKNKADIATADKALKKVQLDKADIASKKDEAVKTITTMN-------LKLGTLKQDLTEVN----LALTNQSEGDTIPE---------METKLKSLRREIQEAESNVQGLKMRKGASVLQERAAKTILAQQTSKMNEAAQALT-----DGGLSEIKANIAQ------KQKEVNRNKTNLG-KVVAEIKSQTAKAVEAERDFENTKRDAKVKTR--TEITNVVDRAQLAAHQKELEVRKRQMAAEFDMTPKEMQEKVSRKKKIYVTLKKQLEAVEVNFHKIEAMQEVRKNVFVGIRQSLIRSVRTIFIMRMQDHGLLGNLEVSHTRKTLNIKVSHLRGSQEPKAEDALPLSSLSGGERSKTLVCLMIASWEYMAPPFRCLDEWDVYLDERSRSMIEEVLFSYAKSK-DFQYILISPQG-STLKGANIVQIGR 1142 +D SG S + D T ++G+++ I + NFM H+S+ + L+ N + G+NGSGKS+IL A+++GLGG+A T R +S + F++ A I + + N G Y+ YG I R+I ++G + +K E G+VV + K +E +I +IQ++NP+S+L Q+ A+ F +T Y F++AT L+ ++QMYE + D + K++ + A+ E+ K ++ + +K + +LE ++ W S+E + LK Q L ++A+ A+ ++ K ++ LL +E E +E + R++E E + Y ++EE K + +L+T + + + +L + K A R + C E++ K V + +K N H Q LS +QKL +E ++ E + R + ++ L R +SL FGA +AQ I E+ R F+ P GP+G++I+L ED + A +E+ L FLRS+ V + D+ L++IF + P I +F K ++ R VQ ILD L +++ V+N +VD + +ET L++ + A ++ S A+ VPRN +AIT +F P NY Y G NT L ++ +T E L + +K LK VQ +++ E I +N KL LK D+ E LT + E T + ++ + + L+ E+++AE + LK+R ++ +Q + + + A++ S NE + L+ + L E+ I Q KQ+EV + G K+ I +TKR K+ R E N ++ + H E E+ KK Y + + + +E +E M RK F I++ V+ +F + G + + H+ +TL I+V S K E A SLSGGERS V ++A W+ + PPF LDE+DV++D+ +R +I ++L ++++ K ++Q++ ++PQ S ++ + V+I R Sbjct: 60 DDGSGGFSFNEAIRDDT-KAGIIERIHMRNFMCHSSMEVFLNPRTNFIVGKNGSGKSAILTAVIVGLGGKASATNRGSSLKEFIKKGMNTATIEITLRNTGHCSYKKSQYGDRIIVTRIISNTTGYCGYKVKTEQGEVVSSKK---EELDRIVSAFNIQVDNPVSLLNQDAARTFLNSTDPRDKYKLFMKATQLEQIEQMYEESMSDKRWAMAMVNSKKEALHVAKNEVTELGHKWRAVQSLS-SYRKKSRELENELYWAVAVSEEKVAENLK---QDLESQRAQHPALQHDADKEAKLEQKLNLLFKEVEQQINEIMSRLSECEAQ-----YKGSREEVNRRKENYGRKMQELKTLQSRICRMESNINTLLQEIDKIKNNSGPDYAARRQRICHEIQELENKHADV-QATLKTNKHHYFQ--------LSANVQKLKSEEYSLKQELQENLRKIEQKQREIQALKRDTDNSLTVFGAWVPRVAQKIEEAFKQRKFRKMPRGPVGAYIKL-----EDSSWAPAVESFLGP-FLRSYCVDSSHDAAVLTQIFNEVLGKERKPVINTSRFFDKIHNVSRFAVQADG-YRSILDSLIVSDVIVYNSLVDQREVETILLIPTSREACEIMSNARQVPRNCKRAITKKGDQFYP--DPNYRMY-----AGDGNTRARYLQVSMQNAISTAEDHLKGHHFQKGEVEKQLKVVQEQLQTNSNELRETGAVIEKLNKEDLSFMTKLTRLK-DMEEPEPNSIATLTAELEEHTRKKDEICKERDALQAECQRLKHEVEKAEE--KSLKIRDTSTAIQVK-ERPLRAKRESVQNELKEILSRKIFQEERLKELCQKIQQIETQLHKQQEVAKKAVEDGTKICPRI---------------DTKRPPKIVERELNECKNYME--SMEKHSGAFE---------------EICVSYHEKKTKYEQIAEDIRLLEKELAHMEDMIRARKKTFYAIQKLSSVRVQHMFQSLLHQRNYTGKIMIDHSEQTLEIRV-----SPSEKREMAAETKSLSGGERSYATVSFIMALWDAIDPPFYFLDEFDVFMDKVNRRVILDLLLAHSQQKTNYQFVFLTPQDTSAIQSSADVRIHR 1101
BLAST of structural maintenance of chromosomes protein 6 vs. nr
Match: gi|1041110882|ref|XP_017278821.1| (PREDICTED: structural maintenance of chromosomes protein 6 isoform X1 [Kryptolebias marmoratus]) HSP 1 Score: 285.804 bits (730), Expect = 1.276e-76 Identity = 285/1120 (25.45%), Postives = 518/1120 (46.25%), Query Frame = 0 Query: 70 GARSHKRLRILGED--ESGLNSSAR-----------SCLDQTVR-SGVLKEIRLTNFMNHASL-HLRLDDGINLLSGRNGSGKSSILQAIVLGLGGQAKDTKRSTSSRSFVRNDCLKAEIRVRVWNGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGKVVHTDKIADDEKKKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRATLLKPLQQMYENAKHDLIVCSETLAEKRDNVKEAEAHWMEIQEKVTKIKRVDEEIKKTAMDLEKQILWGYVQSKEIKLKELKNHVQTLSEKKAKEEAIVAESLKSIEVLLEQERESEKVKRMTEAEVKAITMDYNRAKEEQVEAKGKLDLVVMDLETKSTTLSVLREQERSL-ANSVRSKKTMKDRKNAERDRHACEMKRKK---DQVKEDIIKINHSIQDKGKLRDSLSTCLQKLDQDEKDVRAEKLDAQRHQRTLEEDLFNLARSNQSSLKRFGAEFEHLAQDISESR---DFKTPPIGPIGSHIRLVGQASEDKNLADLLETELTKGFLRSFLVATWADSKALSKIFGRHFRGRKPPSIVIWQFRGKKDDIRRGQVQTHSEMPGILDYLEIANPEVFNYVVDFKRIETTLVLSQTMAQDLFSEAKNVPRNAAKAITPDFYRFI-------PATKGNYASYFMERPRGHLNTLVADTRSNQATLEAELAKNKADIATADKALKKVQLDKADIASKKDEAVKTITTMNLKLGTLKQDLTEVNLALTNQSEG-----DTIPEMETKLKSLRREIQEAESNVQGLKMRKGASVLQERAAK----TILAQQTSKMNEAAQALTDGGLSEIKANIAQKQKEVNRNKTNLGKVVAEIKSQTAKAVEAERDFENTKRDAKVKTRTEITNVVDRAQLAAHQKELEVRKRQMAAEFDMTPKEMQ---EKVSRKKK----IYVTLKKQLEAVEVNFHKIEAMQEVRKNVFVGIRQSLIRSVRTIFIMRMQDHGLLGNLEVSHTRKTLNIKVSHLRGSQEPKAEDALPLSSLSGGERSKTLVCLMIASWEYMAPPFRCLDEWDVYLDERSRSMIEEVLFSYAKSKDF-QYILISPQG-STLKGANIVQIGR 1142 G +KR+R D E G N++ R C + V +G+++ I L NFM H+ L +N + G NGSGKS+IL A+++ LGG A+ T R +S + FV+ A++ + + N G Y+PEVYG I + I + R+ + L+ SG+VV T K +E I + +IQ+NNP+SIL QE +K F + Y FF++AT L+ +++ + + K + + + + + +K+ + ++E +E+ + VDE K +L+KQ+ W V KE +L+ ++ +Q+ K + V E +E E+EK + + +++ IT+ + + E K + ++ T+ R R L + V+ +KD K + E + + +Q++ ++ + H I + D + +++ ++ E L+ QR T L + S + L+RFG L I E+ FK P GP+G I L +D LA +E L K +R+F + D K L + + F P+I+ F + D RR V H E P +L LEI +P V N ++D + IE+ L++ + KN P N +A + D + ++ N+ S +E HL + + ++ +A + ++ K + D+ L++ ++ +I KD+A K L+ +LT++ QSE + + E+ K+ S R E ++A++ + LK + + + K TI + S +E ++ TD + + K + ++ + + N+ + ++KS+ E D + V TEI +R ++ K L+ ++ + T KE Q E+V R+ + Y + +Q++ + ++++ R V+ +R+ L + F + G G + H +TL I V +G++ D + SLSGGERS + VC +++ W PFRCLDE+DVY+D +R + +++ A + + Q+I ++PQ S+L +NI++I R Sbjct: 12 GENPNKRIRSSSTDGEEEGTNATERHREGSALSKRFQCTGEVVSDAGIVESITLKNFMCHSLLGPFAFGSNVNFVVGNNGSGKSAILTALIVALGGNAQTTNRGSSLKGFVKEGESSADVSITLRNKGRDAYKPEVYGPSIMIDLRITREGLRT-YKLRSTSGQVVSTKK---EELISILDNFNIQVNNPVSILTQEMSKYFLHSKGEGDKYKFFMKATQLEQMKEDFFHIKTTKSITEDKVEQNSECLKDLKRKYLEKEERYKSLASVDEMHTKLE-ELQKQMAWALVSEKEKELEPVRVKLQSDKRSTEKYDEKVDEWKNKVE-------EAEKYNKQIQKQLEEITVQVQELQPKSAELKIEAQKCNKLFKSCELTVHRCRTNLRDLEKDKVQLSSRIKDLKLSISQTTGAESQARAERVEQIQTELENLKHQISTLCQQTDQYQHACSRAREEQGRIKKEYLELQRLIETNTRTLRTMESSRSNRLRRFGEHMPTLLNAIQEAHKRGQFKHKPRGPLGYLISL-----KDPRLALAVEVCL-KNLIRAFTCDNYNDEKVLKDLMTKVFPAGHRPTIITSHFFTQVHDTRRRAV-NHPEYPSVLQALEIEDPVVANCLIDQRGIESILLIKNRTEARGVMQGKNPPANCTQAFSEDGDQIFNNRNFTADQSRANFLSGDVEEEIRHLQRELENQKAQEARFQQQMRKLEEDVKQNQGLLRRAHTEQKNI---KDKATK-----------LELELTDLKNVEEPQSEDLKPLEEDLQEIAAKISSKRTEYEDAKTQMAALKADYDKAEQEYKQHKDCINTIAEEADSVKDELSK--TDQEMLKCKHHKKHYDEKRSAHLNNIQTLEGQLKSK-------ENDLK-----VSVAKATEI--CPERVEVHRSAKSLDSEISRLKVKI-ATQKEQQGDREEVVRQYREALESYKNMSQQMKNLNSFIKSLDSVMSHRLQVYTDLRKFLSARCKYYFDSMLAQRGYSGRMTFDHKNETLTISVQPGQGNK----ADLSDMRSLSGGERSFSTVCFVLSLWAITEAPFRCLDEFDVYMDMINRRISMDMMLKVADGQRYRQFIFLTPQNMSSLPVSNILRILR 1077
BLAST of structural maintenance of chromosomes protein 6 vs. nr
Match: gi|1338839603|ref|XP_023662743.1| (structural maintenance of chromosomes protein 6 isoform X2 [Paramormyrops kingsleyae]) HSP 1 Score: 282.722 bits (722), Expect = 1.543e-75 Identity = 278/1099 (25.30%), Postives = 508/1099 (46.22%), Query Frame = 0 Query: 102 GVLKEIRLTNFMNHASL-HLRLDDGINLLSGRNGSGKSSILQAIVLGLGGQAKDTKRSTSSRSFVRNDCLKAEIRVRVWNGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGKVVHTDKIADDEKKKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRATLLKPLQQMYENAKHDLIVCSETLAEKRDNVKEAEAHWMEIQEKVTKIKRVDEEIKKTAMDLEKQILWGYVQSKEIKLKELKNHV-----------QTLSEKKAKEEAIVAESLKSIEVLLEQERESEKVKRMTE--AEVKAITMDYNRAKEEQVEAKGKLDLVVMDLETKSTTLSVLREQERSLANSVRSKKTMKDRKNAER----DRHACEMKRKKDQVKEDIIKINHSIQDKGKLRDSLSTCLQKLDQDEKDVRAEKLDAQRHQRTLEEDLFNLARSNQSSLKRFGAEFEHLAQDISESR---DFKTPPIGPIGSHIRLVGQASEDKNLADLLETELTKGFLRSFLVATWADSKALSKIFGRHF-RGRKPPSIVIWQFRGKKDDIRRGQVQTHSEMPGILDYLEIANPEVFNYVVDFKRIETTLVLSQTMAQDLFSEAKNVPRNAAKAITPD-----FYRFIPAT--KGNYASYFMERPRGHLNTLVADTRSNQATLEAE--------------LAKNKADIATADKALKKVQLDKADIASKKDEAVKTITTMNLKLGTLKQDLTEVNLALTNQSEGDTIPEMETKLKSLRREIQEAESNVQGLK-----MRKGASVLQERAAKTIL----AQQTSKMNEAAQALTDGGLSEIKANIAQKQKEVNRNKTNLGKVVAEIKS--QTAKAVEAERDFENTKRDAKVKTRTEITNVVDRAQLAAHQKELEVRKRQMAAEFDMTPKEMQEKVSRKKKIYVTLKKQLEAVEVNFHKIEAMQEVRKNVFVGIRQSLIRSVRTIFIMRMQDHGLLGNLEVSHTRKTLNIKVSHLRGSQEPKAEDALPLS---SLSGGERSKTLVCLMIASWEYMAPPFRCLDEWDVYLDERSRSMIEEVLFSYAKSKDF-QYILISPQGSTLKGANIVQIGR 1142 G+++ I L NFM H L +N + G NGSGKS++L A+++GLGG+A T R +S R FV+ A++ + + N G Y+PEV+G+ I E L S G + L+ +G +V T K +E I + +IQ++NP+SIL QE +K F + Y FF++AT L+ +++ Y V T+ + + +++ + ++E ++K + +D E++ +L+ Q+ W V E ++K + V Q + E K K +V + E+ + E SE+V+++ A +K ++NRA ++ A + + DLE + L+ ++ L +S+ R+ ER +K K + + I + ++ +GK L K+ +E++++ QR R L S +KRFG L Q I E+ FK P+GP+G +RL +D LA +E+ L K + +F + D K L + RHF +GR+PP I++ +F G +I RG+ H + P +L LEI NP V N ++D + +ET L++ + P N +A T D F R+ + Y S +E L + + + R+ ++A+ L++ D A +K+QL+ D+ + ++ + L L+++L E+++ +++ + + K+ L++E +EAE N + K + + A ++E +K+ + K E + GG+ ++KA++ ++KE+ + ++ E +TAK++++E + + + +I+N D + + D ++ QE + K I + +K + + + + + R V+ +R L + F + G +G + +H +TL I V +P D PLS SLSGGERS + VC +++ W PFRCLDE+DVY+D +R + +++ A S+ + Q+I ++PQ L+ N+++I R Sbjct: 56 GIVESIFLKNFMCHGLLGPFAFGPNVNFVVGNNGSGKSAVLTALIVGLGGKAHTTNRGSSLRGFVKEGESSADVSITLRNRGQDAYKPEVFGESIVVE-LRISSEGLRTYKLRSTAGHLVSTKK---EELVSILDHFNIQVDNPVSILTQEMSKHFLHSKGEGDKYKFFMKATQLEQMKEDYAYIMKTKTVTQNTIEKHEECLEDLKRKYLEKEDKYKSLASLD-EMQTKLEELQNQMAWALVTEMEKEMKPSEERVAVEEKATIKYDQKVEEWKTK---VVEAETRYKEIHDQLEGISERVQQLQPQCATLKTEAQNFNRAFKQSEAAFHRSKTTLRDLEKDNEQLTRRVDE---LKHSISQAMGADSRRRMERIETLQAELDTLKHKDSTLAQQIEQFQQAVA-RGKEE------LGKISCEERELQRSIEAKQREHRA-------LVASRTDKIKRFGEHMPALLQAIDEAHKGAQFKQKPVGPLGFCMRL-----KDPELAMAVESCL-KTLMTAFCCDNYKDEKVLQSLMSRHFPQGRRPP-IIVSEFSGTIYNI-RGKSAQHPKYPTVLQALEIDNPVVANCLIDMRAVETILLIKSNQEARQVMQTGAPPVNCREAFTKDGDQVFFNRYYSCEYHRAQYLSRDVEEQIRLLQSEIENQRALVTRVKAQKKEVEDSIRNNENLLSRAYNDGKKAKDRFRKLQLEMTDLQNVEEPQSED-------LQPLEEELQEISVKISSARQERDVAHQ--KMAKLKKEFEEAEHNYRQQKEAISSVAEEADPIKEELSKSDQDVERCKHHKKHYEEKRKAHIGGIQKLKADLGVRKKELEASILKASEICPERLEVRRTAKSLDSEIN----------RLKQKISNQQD-----------------LQGDRDEVIRQYQEALENYKNIVMQVKNLKKFIGL----MAKIMNSRHKVYTEMRMYLSVRCKYYFDSMLSQRGYMGKMTFNHKNETLAISV-------QPGEGDKAPLSDMRSLSGGERSFSTVCFVLSLWAIAEAPFRCLDEFDVYMDMVNRRISMDMMLKIAASQRYRQFIFLTPQSMCLQVNNLIRILR 1074
BLAST of structural maintenance of chromosomes protein 6 vs. nr
Match: gi|405968844|gb|EKC33873.1| (Structural maintenance of chromosomes protein 6 [Crassostrea gigas]) HSP 1 Score: 282.337 bits (721), Expect = 2.023e-75 Identity = 278/1055 (26.35%), Postives = 497/1055 (47.11%), Query Frame = 0 Query: 82 EDESGLNSSARSCLDQTVRS---GVLKEIRLTNFMNHASLHLRLDDGINLLSGRNGSGKSSILQAIVLGLGGQAKDTKRSTSSRSFVRNDCLKAEIRVRVWNGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGKVVHTDKIADDEKKKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRATLLKPLQQMYENAKHDLIVCSETLAEKRDNVKEAEAHWMEIQEKVTKIKRVDEEIKKTAMDLEKQIL-WGYVQSKEIKLKELKNHVQTLSEKKAKEEAIVAESLKSIEVLLEQERESEKVKRMTEAEVKAITMDYNRAKEEQVEAKGKLDLVVMDLETKSTTLSVLREQERSLANSVRSKKTMKDRKNAERDRHACEMKRKKDQVKEDIIKINHSIQDKGKLRDSLSTCLQKLDQDEKDVRAEKLDAQRHQRTLEEDLFNLARSNQSSLKRFGAEFEHLAQDISESR---DFKTPPIGPIGSHIRLVGQASEDKNLADLLETELTKGFLRSFLVATWADSKALSKIFGRHFRGRKPPSIVIWQFRGKKDDIRRGQVQTHSE-MPGILDYLEIANPEVFNYVVDFKRIETTLVLSQTMAQDLFSEAKNV--------PRNAAKAIT--PDFYRFIPATKGNYASYFMERPRGHLNTLVADTRSNQATLEAELAKNKADIATADKALKKVQLDKADIASKKDEAVKTITTMNLKLGTLKQDLTEVNLALTN-QSEGDTIP----EMETKLKSLRREIQEAESNVQGLKMRKGASVLQERAAKTILAQQTSKMNEAAQA---LTDG-GLSEIKANIAQKQKEVNRNKTNLGKVVAEIKSQTAKAVEAERDFENTKRDA------KVKTRTEITNVVDRAQLAAHQKELEVRKRQMAAEFDMT---PKEMQEKVSRKKKIYVTLKKQLEAVEVNFHKIEAMQEVRKNVFVGIRQSLIRSVRTIFIMRMQDHGLLGNLEVSHTRKTLNIKVSHLRGSQEPKAEDALPLSSLSGGERSKTLVCLMIASWEYMAPPFRCLDEWDVYLD 1100 EDE +N + R+ D + G++++I L NFM H+ L + L +N + GRNGSGKS+I+ A+V+GLGG+A T R ++ + F++ AE+ + + N G ++ YG +I ER + G S + LK + GKVV T + +E I + +IQ++NP++IL Q+ ++ F + + H Y FF++AT L+ + Y A + E + +K+ + E ++ ++K + +DE K M+ KQ L W +V S+E L++++ +Q + K + V E+ +E +++ E +++ R T EVK + ++ AKE EAK L + K + L L +ER N+ + + + E +R A E K Q + + +K + + ++ + K +E+ ++ + + H+ ++ L +L + L RFG L Q I E +F P GP+G+ +L ++ A +E L L+SF D K L +F R R+ PSI++ +F+G DI R ++ HSE P + D ++ +P V N ++D + IE L++ EA+ V PRN +A T D +P+ + + H L ++T + L+ EL + + +I + +V++ D + K T +K+G Q L ++N + +S D P +E ++ +L +I E + L + ++ Q +A + + SKM E A+ L D GL+++ +I Q + + L + A+IK + +K E + E+ + A ++ TR I N+ + Q + E + R A E T ++M K+ + K + +QLE V + H+ + E RK + +R + FI+ + + G + +H+++TL + V + E A + SLSGGERS + VC ++A W+ M PFRCLDE+DV+++ Sbjct: 31 EDEDEMNLTQRADFDINSKEADIGIIEKICLKNFMCHSRLDVSLGPHVNFIVGRNGSGKSAIITALVVGLGGKASVTSRGSTIKGFIKTGKYNAEVEIHLRNRGPDAFKASTYGDKIIVERK-FTHDGSSSYKLKSKEGKVVSTKR---EELNAILDQFNIQVDNPVAILNQDTSRNFLNSKSPHDRYKFFLKATQLEQMLLDYTRANEQREITKEIIEKKQQTLPTLEKEVLDWEQKFKSLTALDE--LKGKMEKRKQELAWAFVISRERDLQQMQKCLQQEESRIPKFKQKVEEAKAKVETCIQKHNELKELLRTTNEEVKLLRPQFDAAKETLKEAKADLRNRQNEFRKKESELRKL-AKERDDINARIQELHKSAQHDYEAERRAREEKIGNLQEQANALKAQQTTTEHD--LENFRAAVTKHKGEERQMQMDVNSMKSHEDKRKKQLNDLLSAKNDRLARFGPYMPTLLQHIEERYRRGEFHQKPRGPLGACFKL-----KEPKWAMGVERCLG-ALLQSFCCHDHHDEKVLESVFDRVCNDRQRPSIIVSRFKGSVYDISR--LRAHSERFPAVFDMIDCNDPVVMNTLIDQRGIENILLIEDK------KEARTVMDPDVQAQPRNCHEAFTIEGDQVHSVPSLR------YYSNNNTHARFLTSNTEQDIHRLQGELTQLRQEIQKKE----QVKVTVRDNLRQNQSEEKKCETQLMKIG---QRLNKLNNEIYELKSVEDPAPIDVTTLEEEVSNLETQITEMSAVRDELHTQYQEALSQFQAEEQKFKEVESKMREKAEVGEPLKDEFGLAQV--DIEQAKSHRKHYEQKLSEQEAKIKEEQSKVEEESKVLESDVKKAQQICAERMNTRRSIQNLESEITQISKQIKAEEKSRGNAEEITRTFHEKRDMYRKIVTEVKQCRSFIQQLEKVMI--HRQQQYSEFRK--LIAMR------AKYFFIVLLSNRNYTGKMSFNHSKETLEMNVQ----PTSSEGEGAKDMRSLSGGERSFSTVCFILALWDAMESPFRCLDEFDVFME 1033
BLAST of structural maintenance of chromosomes protein 6 vs. nr
Match: gi|762160119|ref|XP_011418269.1| (PREDICTED: structural maintenance of chromosomes protein 6 isoform X1 [Crassostrea gigas] >gi|762160121|ref|XP_011418270.1| PREDICTED: structural maintenance of chromosomes protein 6 isoform X1 [Crassostrea gigas] >gi|762160123|ref|XP_011418271.1| PREDICTED: structural maintenance of chromosomes protein 6 isoform X1 [Crassostrea gigas]) HSP 1 Score: 282.337 bits (721), Expect = 2.240e-75 Identity = 292/1093 (26.72%), Postives = 517/1093 (47.30%), Query Frame = 0 Query: 82 EDESGLNSSARSCLDQTVRS---GVLKEIRLTNFMNHASLHLRLDDGINLLSGRNGSGKSSILQAIVLGLGGQAKDTKRSTSSRSFVRNDCLKAEIRVRVWNGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGKVVHTDKIADDEKKKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRATLLKPLQQMYENAKHDLIVCSETLAEKRDNVKEAEAHWMEIQEKVTKIKRVDEEIKKTAMDLEKQIL-WGYVQSKEIKLKELKNHVQTLSEKKAKEEAIVAESLKSIEVLLEQERESEKVKRMTEAEVKAITMDYNRAKEEQVEAKGKLDLVVMDLETKSTTLSVLREQERSLANSVRSKKTMKDRKNAERDRHACEMKRKKDQVKEDIIKINHSIQDKGKLRDSLSTCLQKLDQDEKDVRAEKLDAQRHQRTLEEDLFNLARSNQSSLKRFGAEFEHLAQDISESR---DFKTPPIGPIGSHIRLVGQASEDKNLADLLETELTKGFLRSFLVATWADSKALSKIFGRHFRGRKPPSIVIWQFRGKKDDIRRGQVQTHSE-MPGILDYLEIANPEVFNYVVDFKRIETTLVLSQ------TMAQDLFSEAKNVPRNAAKAIT--PDFYRFIPATKGNYASYFMERPRGHLNTLVADTRSNQATLEAELAKNKADIATADKALKKVQLDKADIASKKDEAVKTITTMNLKLGTLKQDLTEVNLALTN-QSEGDTIP----EMETKLKSLRREIQEAESNVQGLKMRKGASVLQERAAKTILAQQTSKMNEAAQA---LTDG-GLSEIKANIAQKQKEVNRNKTNLGKVVAEIKSQTAKAVEAERDFENTKRDA------KVKTRTEITNVVDRAQLAAHQKELEVRKRQMAAEFDMTPKEMQEKVSRKKKIYVTLKKQLEAVEVNFHKIEAMQEV---RKNVFVGIRQSLIRSVRTIFIMRMQDHGLLGN--LEVSHTRKTLNIKVSHLRGSQEPKAEDALPLSSLSGGERSKTLVCLMIASWEYMAPPFRCLDEWDVYLDERSRSMIEEVLFSYAKS-KDFQYILISPQGSTLKGANI 1137 EDE +N + R+ D + G++++I L NFM H+ L + L +N + GRNGSGKS+I+ A+V+GLGG+A T R ++ + F++ AE+ + + N G ++ YG +I ER + G S + LK + GKVV T + +E I + +IQ++NP++IL Q+ ++ F + + H Y FF++AT L+ + Y A + E + +K+ + E ++ ++K + +DE K M+ KQ L W +V S+E L++++ +Q + K + V E+ +E +++ E +++ R T EVK + ++ AKE EAK L + K + L L +ER N+ + + + E +R A E K Q + + +K + + ++ + K +E+ ++ + + H+ ++ L +L + L RFG L Q I E +F P GP+G+ +L ++ A +E L L+SF D K L +F R R+ PSI++ +F+G DI R ++ HSE P + D ++ +P V N ++D + IE L++ M D+ ++ PRN +A T D +P+ + + H L ++T + L+ EL + + +I + +V++ D + K T +K+G Q L ++N + +S D P +E ++ +L +I E + L + ++ Q +A + + SKM E A+ L D GL+++ +I Q + + L + A+IK + +K E + E+ + A ++ TR I N+ + Q + E + R A E T EK +KI VT KQ + I+A+ E RK +R + V+ FI ++ N +E+SH ++T++I V + E A + SLSGGERS + VC ++A W+ M PFRCLDE+DV++D +R + +++ A++ K Q+I ++PQ + G I Sbjct: 31 EDEDEMNLTQRADFDINSKEADIGIIEKICLKNFMCHSRLDVSLGPHVNFIVGRNGSGKSAIITALVVGLGGKASVTSRGSTIKGFIKTGKYNAEVEIHLRNRGPDAFKASTYGDKIIVERK-FTHDGSSSYKLKSKEGKVVSTKR---EELNAILDQFNIQVDNPVAILNQDTSRNFLNSKSPHDRYKFFLKATQLEQMLLDYTRANEQREITKEIIEKKQQTLPTLEKEVLDWEQKFKSLTALDE--LKGKMEKRKQELAWAFVISRERDLQQMQKCLQQEESRIPKFKQKVEEAKAKVETCIQKHNELKELLRTTNEEVKLLRPQFDAAKETLKEAKADLRNRQNEFRKKESELRKL-AKERDDINARIQELHKSAQHDYEAERRAREEKIGNLQEQANALKAQQTTTEHD--LENFRAAVTKHKGEERQMQMDVNSMKSHEDKRKKQLNDLLSAKNDRLARFGPYMPTLLQHIEERYRRGEFHQKPRGPLGACFKL-----KEPKWAMGVERCLG-ALLQSFCCHDHHDEKVLESVFDRVCNDRQRPSIIVSRFKGSVYDISR--LRAHSERFPAVFDMIDCNDPVVMNTLIDQRGIENILLIEDKKEARTVMDPDVQAQ----PRNCHEAFTIEGDQVHSVPSLR------YYSNNNTHARFLTSNTEQDIHRLQGELTQLRQEIQKKE----QVKVTVRDNLRQNQSEEKKCETQLMKIG---QRLNKLNNEIYELKSVEDPAPIDVTTLEEEVSNLETQITEMSAVRDELHTQYQEALSQFQAEEQKFKEVESKMREKAEVGEPLKDEFGLAQV--DIEQAKSHRKHYEQKLSEQEAKIKEEQSKVEEESKVLESDVKKAQQICAERMNTRRSIQNLESEITQISKQIKAEEKSRGNAEEITRT---FHEKRDMYRKI-VTEVKQCRSF------IQALLEALDKRKTNSRKMRSFISLRVKLNFIEQVAITKPTWNSKMEISHKKETISILVQ----PTSSEGEGAKDMRSLSGGERSFSTVCFILALWDAMESPFRCLDEFDVFMDMVNRRISMDMMMVVARNQKHKQFIFLTPQNMSKLGIEI 1073
BLAST of structural maintenance of chromosomes protein 6 vs. nr
Match: gi|1228000417|ref|XP_021932088.1| (structural maintenance of chromosomes protein 6 isoform X2 [Zootermopsis nevadensis] >gi|1228000419|ref|XP_021932089.1| structural maintenance of chromosomes protein 6 isoform X2 [Zootermopsis nevadensis] >gi|646705029|gb|KDR12930.1| Structural maintenance of chromosomes protein 6 [Zootermopsis nevadensis]) HSP 1 Score: 281.567 bits (719), Expect = 3.048e-75 Identity = 284/1092 (26.01%), Postives = 531/1092 (48.63%), Query Frame = 0 Query: 90 SARSCLDQTVRSGVLKEIRLTNFMNHASLHLRLDDGINLLSGRNGSGKSSILQAIVLGLGGQAKDTKRSTSSRSFVRNDCLKAEIRVRVWNGGSQRYRPEVYGKEINFERLIYKSSGRSMHVLKDESGKVVHTDKIADDEKKKICEFLSIQLNNPISILQQEEAKIFFTNTTGHSLYDFFIRATLLKPLQQMYENAKHDLIVCSETLAEKRDNVKEAEAHWMEIQEKVTKIKRVDEEIKKTAMDLEKQILWGYVQSKEIKLKELKNHVQT-LSEKKAKEEAIVAESLKSIEVLLEQERESEKVKRM------TEAEVKAITMDYNRAKEEQVEAKGKLDLVVMDLETKSTTLSVLREQERSLAN-SVRSKKTMKDRKNAERDRHACEMKRKKD--QVKEDIIKINHSIQDKGKLRDSLSTCLQKLDQDEKDVRAEKLDAQRHQRTLEEDLFNLARSNQSSLKRFGAEFEHLAQDISES---RDFKTPPIGPIGSHIRLVGQASEDKNLADLLETELTKGFLRSFLVATWADSKALSKIFGRHFRGRKPPSIVIWQFRGKKDDIRRGQVQTHSEMPGILDYLEIANPEVFNYVVDFKRIETTLVLSQTM-AQDLFSEAKNVPRNAAKAIT-------PD-FYRFIPATKGNYASYFMERPRGHLNTLVADTRS---NQATLEAELAKNKADIATADKALKKVQLDKADIASKKDEAVKTIT----TMNLKLGTLKQDLTEVNLALTNQSEGDTIPEMETKL--KSLRREIQEAESNVQGLKMRKGASVLQERAAKTILAQQTSKMNEAAQ---ALTDGGLSEIKANIAQKQKEVNRNKTNLGKVVAEIKSQTAKAVEAERDFENTKRDAKVKTRTEITNVVDRAQLAAHQKELEVRKRQMAAEFDMTPKEMQEKVS--RKKKIYVTLKKQLEAVEVNFHKIEAMQEVRKNVFVGIRQSLIRSVRTIFIMRMQDHGLLGNLEVSHTRKTLNIKVSHLRGSQEPKA-EDALPLSSLSGGERSKTLVCLMIASWEYMAPPFRCLDEWDVYLDERSRSMIEEVLFSYAKSK-DFQYILISPQGS-TLKGANIVQIGR 1142 S C + G+++ I + NFM H+S+ + L+ IN + GRNGSGKS+IL A+++GLGG+A T R S + F++ A I + + N G Y+ E YG I R I S+ + + +K G+V+ + K +E +I +IQ+ NP++I+ Q+ A+ F ++ H Y+ F++AT L+ ++Q Y + D + L +++ + AE E+Q K K++ + +K +++LE ++ W S+E +L+ +++ +E + + ES + + L ++ +++ M EAE K + R KE + + E K+ L +LR + AN +V ++ K +N+ DR A + K + + ++++ + + +++ L++ L+K+ +E +R E + R + +L L R +S+ FGA ++Q I E+ R F P GP+G++I+L +D + A LE+ L FLRS+ V + D++ L +IF + P+I+ +F K ++ + V+ ILD + + + V N ++D +E L++ + A D S+A+ VP N +A+T PD YR A YF ++T D ++ + +E + TA + K D+ ++A +V+ ++ ++ LKL LK D+ E NL + + + E ET+ K +R+ EAE + +M K A + + TI QT + A+ L+D L EI + ++++ N + ++ ++ SQ +A +A D AK+ R + + +KEL K+ M + + T K + VS +K Y + + ++ +E +E M ++R+N F IR+ + V+ +F + G + + H ++TLN+KVS S+E ++ D + +LSGGERS V ++A W+ + PPF LDE+DV++D+ +R + ++L +++ K ++Q++ ++PQ + T++ V I R Sbjct: 44 SFSGCTSNEPKCGIIERIYMRNFMCHSSMEICLNPRINFVVGRNGSGKSAILTALIVGLGGKASSTNRGASLKEFIKKGSNTATIEITLRNTGHYNYKREEYGDRIIVLRSISNSTAQCYYRVKTGQGEVISSKK---EELDRIVSAFNIQIENPVTIMNQDTARTFLNSSNSHEKYNLFMKATQLEQIKQTYAESMLDKRTATALLNSRKEAIIVAENKVTELQLKWKKVQSLG-NYRKKSLELENELYWAVAVSEEKAADKLEQEIESRRAEYSDLQRGVTKESEQEQMLHLHSKKVDQQISEMKHRFAECEAEYKGSREEVKRTKENYTQK---------ERECKTLELKILRIE----ANINVLRQEIEKVEENSGGDRVARQQKNRLEIQELEKKLADVAVTLKTNKHHYSQLNSNLEKIKSEEFSLRQELQEQTRKIEQKQTELQALKREKDNSVTLFGAWVPRVSQKIDEAFKQRKFGKMPKGPVGAYIKL-----KDASWAPALESFLG-SFLRSYCVDSARDAQVLMQIFNDVLGKERKPAIITSRFFDKVHNVSKFAVKADG-YSSILDSVVVQDTVVCNCLIDQWEVENILLIPTSREACDTMSDARRVPLNCKRAVTKKGDLFYPDPNYRMYSGNGSTRAKYFQVSMADAISTAEEDLKAFHFQKKVVEKQF--------TAIRKQLKANYDEFNVAGS---SVRKMSNEEHSLQLKLTKLK-DMDEPNLNSIDTLTAE-LEEYETQYADKCKQRDTLEAECQLLKDEMDK-ADLKSSQIRDTIKDMQTEECPLLAKRETMLSD--LREILSKKKFQEEKCNEFHKKILQLQTQLHSQQERAKKAVND------AAKICPRIDTERIP-----VVVEKELNECKKYMESVEEHTGKHEEICVSYHERKTKYEQIVEDMKNLEQGLTYLEDMIKIRENTFNTIRRLIGLRVQHMFQSLLYRRRYTGAIVIDHQKQTLNVKVS---PSKECRSVGDTM---TLSGGERSYATVSFIMALWDAIDPPFYFLDEFDVFMDKVNRRVTMDLLLQHSRLKTNYQFVFLTPQDTYTIQSDEDVTIHR 1078 The following BLAST results are available for this feature:
BLAST of structural maintenance of chromosomes protein 6 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of structural maintenance of chromosomes protein 6 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 14
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BLAST of structural maintenance of chromosomes protein 6 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1000_size72005:43442..56779- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1000_size72005-snap-gene-0.10 ID=maker-scaffold1000_size72005-snap-gene-0.10|Name=structural maintenance of chromosomes protein 6|organism=Tigriopus kingsejongensis|type=gene|length=13338bp|location=Sequence derived from alignment at scaffold1000_size72005:43442..56779- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'structural maintenance of chromosomes protein 6' has the following synonyms
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