dna polymerase kappa, maker-scaffold1013_size70870-snap-gene-0.18 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of dna polymerase kappa vs. L. salmonis genes
Match: EMLSAG00000004221 (supercontig:LSalAtl2s:LSalAtl2s222:1005909:1009023:-1 gene:EMLSAG00000004221 transcript:EMLSAT00000004221 description:"maker-LSalAtl2s222-snap-gene-10.41") HSP 1 Score: 452.595 bits (1163), Expect = 3.015e-151 Identity = 240/462 (51.95%), Postives = 318/462 (68.83%), Query Frame = 0 Query: 10 MPLMALNDTKAGMEGLDKAKIEAIIEENSKGSKFYQAKLKSQERITEQVTKMKTSWENLTQHKIDKALAEADRLVEDLRSSRDLSRTIVHIDMDAFYAAVEMRDDPALKIKPM-AVGGMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLTDTLTALAGTSDCQTMVEEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDLYERRALLKLLFSDISFQSFMRIALGLGSNHPSDWNEQGRKSMSTETTFRDTSSVEVLHGICTTICQELAQDLQKHSLQGRSVTLKIKTHKFQIKTKVRHLPEPTSQANLIEKAAQKILKQFEDNAEEKPLTLRLMGVRMS--GWDGNSGQQSISSFLNAKRDSSKSF-ECPIC 467 + ++ALND KAGM+GLDK +I IIEE SKGSK+Y+++L Q+RI +++ MK +++ + D L+ +L RDLSRTIVH+DMDA+YAAVEM P + AVG GMLSTSNY ARK+GVRAGMPGFIAKKLCP L I+ P+F KY ++ +R+VF YD NF PMSLDEAYLD+TD L A +D + + E IR +I D T LTASAGIA+N +LAK CSDQ KPNGQFYL P+ + I FV +L +RKV GIGNVT Q+L +IG++TC DL+ + +LK+LFSD+SF +F+ +ALG+G N S +E+ RKSMSTETTFRDTS+ L IC + EL+Q+L +L+G+ +TLKIKT F +K+K + T++ +LI A + L+ F N E KPLTLRLMGVRMS G++ S Q +++ FL+ + F CP C Sbjct: 11 ISVIALNDGKAGMDGLDKERINKIIEETSKGSKYYESQLIKQKRIDDRMKAMKERLSHISSPE------PVDTLILELEKQRDLSRTIVHVDMDAYYAAVEMLGPPPIPPDVPIAVGSTGMLSTSNYPARKYGVRAGMPGFIAKKLCPHLRIIPPDFTKYTTIAEKIRTVFARYDSNFSPMSLDEAYLDITDYLKNNA--TDPEKVAETIRQEIYDATGLTASAGIASNALLAKXCSDQNKPNGQFYLKPNRDEIMNFVGKLPVRKVGGIGNVTSQLLKAIGISTCSDLFNKLNVLKVLFSDLSFDNFIHVALGMGPNRLS--SERERKSMSTETTFRDTSNESELLNICRDLSNELSQELLNANLRGKCITLKIKTDTFVVKSKAHSIKGYTNEFDLISNTAVQCLRWFFKNIESKPLTLRLMGVRMSEFGFEKKS-QGTLTPFLSTSIQKEEDFVACPNC 461
BLAST of dna polymerase kappa vs. L. salmonis genes
Match: EMLSAG00000009677 (supercontig:LSalAtl2s:LSalAtl2s623:345770:348621:-1 gene:EMLSAG00000009677 transcript:EMLSAT00000009677 description:"maker-LSalAtl2s623-augustus-gene-3.20") HSP 1 Score: 105.145 bits (261), Expect = 3.296e-24 Identity = 71/242 (29.34%), Postives = 117/242 (48.35%), Query Frame = 0 Query: 57 QVTKMKTSWENLTQHKIDKALAEADRLVEDLRSSRDLSRT---IVHIDMDAFYAAVEMRDDPALKIKPMAV----------------GGMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLTDTLTALAGTSDCQTMVEEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIG 279 ++ M +++ L D L + E L+S + S T I+HIDMD F+ +V + +P LK +P+ V M +++ +Y AR GV+ GM A KLCP++ + +F Y +V+T + + Y N +S DE +DL D +D E +R ++ + T AS GI N +LAK+ + KPNG F ++ D I+ F+ +S+ +SG+G Sbjct: 180 HISSMACNFKTLVSEMRDAKLDDLYPAREKLKSLKHRSSTEPVIMHIDMDCFFVSVGLLCNPVLKGEPVGVTHSKNGEGPSSSTTVNNSMSEIASCSYEARAAGVKNGMFVGDAMKLCPNIKFIPYDFDAYVKVATKLYEIVANYTLNIQAVSCDEMLVDLKDI------QADPIEFAEVLRKEVFEFTGCHASVGIGGNILLAKLATRNAKPNGVFRISSDEREIAEFMKSVSLSDLSGVG 415
BLAST of dna polymerase kappa vs. L. salmonis genes
Match: EMLSAG00000001261 (supercontig:LSalAtl2s:LSalAtl2s1206:20447:25140:1 gene:EMLSAG00000001261 transcript:EMLSAT00000001261 description:"augustus_masked-LSalAtl2s1206-processed-gene-0.2") HSP 1 Score: 98.9821 bits (245), Expect = 2.310e-22 Identity = 117/439 (26.65%), Postives = 190/439 (43.28%), Query Frame = 0 Query: 95 RTIVHIDMDAFYAAVEMRDDPALKIKPMAV------GGMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIV-------GPNFKKYQEVSTIVRSVFQEYDPNFCP--MSLDEAYLDLTDTLTALAGTS-DCQTM---------------------------------VEEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGN-VTEQMLNSIGVNTCRDLYE-RRALLKLLFSDISFQSFMRIALGLGSNHPSDWNEQGRKSMSTETTFRDTSS-VEVLHGICTTICQELAQDLQKHSLQGRSVTLKI-KTHKFQI-----KTKV-RHLPEPTSQANLIEKAAQKILKQFEDNAEEK------PLT-LRLMGVRMSGWDGNSGQQSISSFLNAKRDSSKSFECPIC 467 R +V +DMD FY VE +DDP+L P AV G G+++ NY AR FGV M G AK CP++ +V + KY+E V S ++D F S+DEAYLD+T + A+ T QT+ +E++R + ++T SAGIA N +LAK+ KPN Q L ++ +L + K+ G+G +Q+LN + + T +L L F + + R+ GL + P + E KS+ FR ++ + + + + LA++L ++ + V ++ KT + K+ V R T + I +++++ +NA +K P+T L L + +GN G SIS+F N+K + P C Sbjct: 4 RIVVLLDMDCFYCQVEAKDDPSLAGVPSAVVQHNDWRGGGIIAV-NYEARAFGVTRNMRGADAKLKCPEIQLVRVPMIREKADLSKYREAGKAVISAITQFDSKFIVERASVDEAYLDITPAVEAMESTPISSQTLPNTNVVGFEKNQVHKWLEDLNADDTRLSIGAYIMEQVREAVFEKTGFRCSAGIAHNKILAKISCGLHKPNQQTVLPH--SSVPILYSKLKLTKLRGLGGKFGDQVLNLLNIETAMELSTINLKTLHKYFDEKTSLWLYRLGQGL-DDEPVNGRELP-KSIGCSKNFRGPQKRLDTMEKVIRWM-KSLAEELSDRLIKDKEVNARVPKTLNINVGLEGSKSSVSRGGAFNTFDVDGITDRGLQLIQKL-NNATDKEKYWKPPITLLSLNASKFEELNGN-GTTSISAFFNSKLNVQTQQSEPTC 434
BLAST of dna polymerase kappa vs. SwissProt
Match: gi|75260779|sp|Q6JDV7.1|POLK_ARATH (RecName: Full=DNA polymerase kappa; Short=AtPOLK) HSP 1 Score: 358.221 bits (918), Expect = 7.416e-116 Identity = 197/472 (41.74%), Postives = 295/472 (62.50%), Query Frame = 0 Query: 2 SSTSSGIGMPLMALN----DTKAGMEGLDKAKIEAIIEENSKGSKFYQAKLKSQERITEQVTKMKTSWENLTQHKIDKALAEADRLVEDLRSSRDLSRTIVHIDMDAFYAAVEMRDDPALKIKPMAVGGMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLTDTL--TALAGTSDCQTMVEEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQML-NSIGVNTCRDLYERRALLKLLFSDISFQSFMRIALGL-GSNHPSDWNEQGRKSMSTETTFRDTSSVEVLHGICTTICQELAQDLQKHSLQGRSVTLKIKTHKFQIKTKVRHLPEPTSQANLIEKAAQKILKQFEDNAEEKPLTLRLMGVRMSGW-----DGNSGQQSISSFLNAKRDSSK 460 SS+++ P + N + KAGMEG+DK K++ ++ E SKGSK++Q + + + + +++ M+ L+ + D+ + +L ++RDLSR +H+DMDAFYAAVE DP++K KPMAVGG+ M+ST+NY ARKFGVRA MPGFIA+KLCPDL+ V +F KY S + R VF+ YDP+F SLDEAYLD+T+ L+G + EE+R + T LT SAG+AAN +LAKVCSD KPNGQF L D T+ FV L +RK+ GIG VTE +L +++G+ TC ++ ++ +LL LFS S F+ + LGL G+N P + RKS+S+E TF T +L+ + + L+ D++K L R++TLK+KT F+I+++ L T ++ I K A K+LK E P+++RL+G+RMS + + + Q +I+ F+ ++DSS+ Sbjct: 6 SSSTNNSSRPWESYNTVFTNAKAGMEGVDKEKVQRVVYEMSKGSKYFQNEERKEALMKQKIEHMRDRCAKLSSLDLSNYQKVVDKRILELEATRDLSRIWLHVDMDAFYAAVETLSDPSIKGKPMAVGGLSMISTANYEARKFGVRAAMPGFIARKLCPDLIFVPVDFTKYTHYSDLTRKVFRNYDPHFIAGSLDEAYLDITEVCRERGLSGGE----IAEELRSSVYSETGLTCSAGVAANRLLAKVCSDINKPNGQFVLQNDRSTVMTFVSFLPVRKIGGIGKVTEHILKDALGIKTCEEMVQKGSLLYALFSQSSADFFLSVGLGLGGTNTP---QVRSRKSISSERTFAATGDERLLYSKLDELAEMLSHDMKKEGLTARTLTLKLKTASFEIRSRAVSLQRYTCSSDDILKHATKLLKA------ELPVSVRLIGLRMSQFVEEIRNSDPSQGTITKFI-VQKDSSR 463
BLAST of dna polymerase kappa vs. SwissProt
Match: gi|59798433|sp|Q9QUG2.1|POLK_MOUSE (RecName: Full=DNA polymerase kappa; AltName: Full=DINB protein; Short=DINP) HSP 1 Score: 355.91 bits (912), Expect = 4.768e-113 Identity = 213/520 (40.96%), Postives = 291/520 (55.96%), Query Frame = 0 Query: 13 MALNDTKAGMEGLDKAKIEAIIEENSKGSKFYQAKLKSQERITEQVTKMKTSWENLTQHKIDKALAEADRLVEDLRSSRDLSRTIVHIDMDAFYAAVEMRDDPALKIKPMAVGGMGMLSTSNYLARKFGVRAGM----------------PGF-----IAKKLCPDLVIVGPNF----------------KKYQEVSTIVRSVF-------------------QEYDPNFCPMSLDEAYLDLTDTLTALAGTSDCQT-----------------MVEEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDLYERRALLKLLFSDISFQSFMRIALGLGSNHPSDWNEQG-RKSMSTETTFRDTSSVEVLHGICTTICQELAQDLQKHSLQGRSVTLKIKTHKFQIKTKVRHLPEPTSQANLIEKAAQKILKQFEDNAEEKPLTLRLMGVRMSGW----DGNSGQQSISSFLNA 454 M LND KAGMEGLDK KI II E +KGS+FY +LK ++++ +++ M +T ++ KA + D+ +L +R+L+ TIVH+DMDAFYAAVEMRD+P LK KP+AVG M ML+TSNY AR+FGVRA M P F ++K++ L PNF ++ Q+ R F EY+ + P+ +++ DL + S+ Q +V+EIR +IE +T LTASAGIA NTMLAKVCSD+ KPNGQ+ + P + F+ L IRKVSGIG VTE+ML ++G+ TC +LY++RALL LLFS+ S+ F+ IALGLGS +D G RKSMS E TF + S E + +C +C ELA DLQK L+GR+VT+K+K F++KT+ +P S A I A+++L+ + PL LRLMGVRMS + D Q+SI FL A Sbjct: 18 MGLNDNKAGMEGLDKEKINKIIMEATKGSRFYGNELKKEKQVNQRIENMMQQKAQITSQQLRKAQLQVDKFAMELERNRNLNNTIVHVDMDAFYAAVEMRDNPELKDKPIAVGSMSMLATSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNITQHLQERQDWPEDKRRYFIKMGNYLKIDTPRQEANELTEYERSISPLLFEDSPPDLQPQGSPFQLNSEEQNNPQIAQNSVVFGTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPSRSAVMDFIKDLPIRKVSGIGKVTEKMLMALGIVTCTELYQQRALLSLLFSETSWHYFLHIALGLGS---TDLARDGERKSMSVERTFSEISKTEEQYSLCQELCAELAHDLQKEGLKGRTVTIKLKNVNFEVKTRASTVPAAISTAEEIFAIAKELLRTEVNVGSPHPLRLRLMGVRMSTFSSEDDRKHQQRSIIGFLQA 534
BLAST of dna polymerase kappa vs. SwissProt
Match: gi|374095490|sp|P34409.3|POLK_CAEEL (RecName: Full=DNA polymerase kappa) HSP 1 Score: 321.242 bits (822), Expect = 1.901e-102 Identity = 205/536 (38.25%), Postives = 283/536 (52.80%), Query Frame = 0 Query: 12 LMALNDTKAGMEGLDKAKIEAIIEENSKGSKFYQAKLKSQERITEQVTKMKTSWENLTQHKIDKALAEADRLVEDLRSSRDLSRTIVHIDMDAFYAAVEMRDDPALKIKPMAVGGMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLTDTLTA-----------LAGTSDC------------------------------------------QTMVEEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDLYERRALLKLLFSDISFQSFMRIALGLGSNHPSDWNEQGRKSMSTETTFRDTSSVEVLHGICTTICQELAQDLQKHSL-QGRSVTLKIKTHKFQIKTKVRHLPEPTSQANLIEKAAQKILKQFEDNAEEKPLTLRLMGVRMSGW----DGNSGQQSISSFLNAKRDSSKSFE-----------------CPICLKDIQ 472 ++ ND KAGM GLDK KI +IEEN+ S + K Q RI E+V ++K + T+ + K+ + L L SSRDLSR V IDMDA++AAVEMRD+PAL+ PMAVG MLSTSNYLAR+FGVRAGMPGFI+ KLCP L IV N+ KY +VS +F EYD + MSLDEA++DLTD + + G C + V EIR ++E T LT SAGIA+N MLAK+CSD KPNGQ+ L D I F+ L IRKV GIG V E L ++ + T D+ ++ L L F+ +S +SF+R ALGL PS+ + + RKS+S E TF TS +L IC+ L +D++K + G++VTLK+K F + T+ + I+K + ++L++ EK +RL+GVR+S D ++I+ F N K+ ++ + CPIC D++ Sbjct: 1 MLTFNDNKAGMNGLDKEKITKVIEENTSAS-YSSFSKKQQSRIEEKVLEIKNRLQTATREERQKSEILMENLEMKLESSRDLSRDCVCIDMDAYFAAVEMRDNPALRTVPMAVGSSAMLSTSNYLARRFGVRAGMPGFISNKLCPSLTIVPGNYPKYTKVSRQFSQIFMEYDSDVGMMSLDEAFIDLTDYVASNTEKKTFKRHRFGGDCPCWLPRFDENENTLEDLKIEESICPKCEKSRKIYYDHVEFGTGREEAVREIRFRVEQLTGLTCSAGIASNFMLAKICSDLNKPNGQYVLENDKNAIMEFLKDLPIRKVGGIGRVCEAQLKAMDIQTVGDMNLKKNLYPLCFTPLSQESFLRTALGL-PGRPSESDPR-RKSISVERTFSPTSDFNILLEEHQEICRMLEEDVRKSGIVGGKTVTLKLKLSSFDVLTRSLTPSDVVKSLEDIQKFSLELLEK------EKGKEIRLLGVRLSQLIFEEDEKKRSKTITEFWNEKKLQIQNLQGSENVDDDDVIMMDTRPCPICGTDVE 527
BLAST of dna polymerase kappa vs. SwissProt
Match: gi|74626930|sp|O74944.3|POLK_SCHPO (RecName: Full=DNA polymerase kappa; AltName: Full=Meiotically up-regulated gene 40 protein) HSP 1 Score: 313.923 bits (803), Expect = 2.848e-100 Identity = 177/467 (37.90%), Postives = 277/467 (59.31%), Query Frame = 0 Query: 19 KAGMEGLDKAKIEAIIEENSKGSKFYQAKLKSQERITEQVTKMKTSWENL-TQHKIDKALAE--------ADRLVEDLRSSRDLSRTIVHIDMDAFYAAVEMRDDPALKIKPMAVGGMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLTD--TLTALAGTSDCQTMV-EEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDLYERRALLKLLFSDISFQSFMRIALGLGSNHPSDWNEQGRKSMSTETTF-RDTSSVEVLHGICTTICQELAQDLQKHSLQGRSVTLKIKTHKFQIKTKVRHLPEPTSQANLIEKAAQKILKQFEDNAEEKPLTLRLMGVRMSGWDGNSGQQSISSFLNAKRDSSKSFECPICLKDIQ 472 K+G E +++ KI II E SKGSKF++A+ K + ++ K++ E ++ + DKA D VED R+ RDL++ IVH+D DAFYA++E +P LK PMAVG +L T+NY+ARKFGVR+ MP FIA+K+CPDLV++ N +Y S +++V +YD N CP S+DE Y++LT L LA T + TMV E+IR ++ + T +T S GIAAN +LAK+ S+++KPN QF++ D IS+F++ L +R+VSGIG V EQ L + + TC D+ +L +F SFQ+ +R + G G+ ++ E RK++ +E TF + SS ++ + Q ++++LQK L S+ +K KT +FQ+ TK + + + + + K A ++L+Q P+T+RL+GVR + S + + K S + CP+C K+I+ Sbjct: 45 KSGQENVNQKKINEIIYEASKGSKFFEAEQKRDRELRLRIEKVQVEVEKYQSKLRFDKAFQREWTIRQESVDTTVEDFRAKRDLTQIIVHVDCDAFYASIEELKNPKLKSLPMAVGK-SVLCTANYVARKFGVRSAMPEFIARKICPDLVVIPLNLSEYAIKSKEIQNVLAQYDSNLCPASIDEFYMNLTSHLRLQELAFTVENITMVVEKIRKQVHEETGVTVSCGIAANKLLAKIASNKRKPNNQFFIPFDEIGISKFMNDLPVREVSGIGRVLEQQLLGLEIKTCGDIQRNLVILSYIFLPKSFQNLLRCSYGFGTTILDEYGESKRKTIGSEATFSSNLSSPSIIEYKLRLLVQNVSENLQKRGLVTNSIAIKYKTSEFQVHTKQKSIGQFIHSESDLLKPALQLLRQ------SYPMTIRLLGVRATKLVSKSRCLA----MQLKFQSQNTVPCPVCQKNIE 500
BLAST of dna polymerase kappa vs. SwissProt
Match: gi|59798438|sp|Q9UBT6.1|POLK_HUMAN (RecName: Full=DNA polymerase kappa; AltName: Full=DINB protein; Short=DINP) HSP 1 Score: 240.736 bits (613), Expect = 1.227e-69 Identity = 113/190 (59.47%), Postives = 140/190 (73.68%), Query Frame = 0 Query: 13 MALNDTKAGMEGLDKAKIEAIIEENSKGSKFYQAKLKSQERITEQVTKMKTSWENLTQHKIDKALAEADRLVEDLRSSRDLSRTIVHIDMDAFYAAVEMRDDPALKIKPMAVGGMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLTDTL 202 M LND KAGMEGLDK KI II E +KGS+FY +LK ++++ +++ M +T ++ KA + DR +L SR+LS TIVHIDMDAFYAAVEMRD+P LK KP+AVG M MLSTSNY AR+FGVRA MPGFIAK+LCP L+IV PNF KY+ VS V+ + +YDPNF MSLDEAYL++T L Sbjct: 19 MGLNDNKAGMEGLDKEKINKIIMEATKGSRFYGNELKKEKQVNQRIENMMQQKAQITSQQLRKAQLQVDRFAMELEQSRNLSNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHL 208 HSP 2 Score: 233.032 bits (593), Expect = 7.476e-67 Identity = 128/268 (47.76%), Postives = 175/268 (65.30%), Query Frame = 0 Query: 203 TALAGTSDCQTMVEEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDLYERRALLKLLFSDISFQSFMRIALGLGSNHPSDWNEQGRKSMSTETTFRDTSSVEVLHGICTTICQELAQDLQKHSLQGRSVTLKIKTHKFQIKTKVRHLPEPTSQANLIEKAAQKILKQFEDNAEEKPLTLRLMGVRMSGW----DGNSGQQSISSFLNAKRDSSKSFECPI 466 + + GTS Q +V+EIR +IE +T LTASAGIA NTMLAKVCSD+ KPNGQ+ + P+ + + F+ L IRKVSGIG VTE+ML ++G+ TC +LY++RALL LLFS+ S+ F+ I+LGLGS H + E RKSMS E TF + + E + +C +C ELAQDLQK L+GR+VT+K+K F++KT+ + S A I A+++LK D PL LRLMGVR+S + D Q+SI FL A + + EC + Sbjct: 283 SVVFGTS-AQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQAVMDFIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGSTHLTRDGE--RKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKERLKGRTVTIKLKNVNFEVKTRASTVSSVVSTAEEIFAIAKELLKTEIDADFPHPLRLRLMGVRISSFPNEEDRKHQQRSIIGFLQAGNQALSATECTL 547
BLAST of dna polymerase kappa vs. SwissProt
Match: gi|81557124|sp|Q5FSM8.1|DPO4_GLUOX (RecName: Full=DNA polymerase IV; Short=Pol IV) HSP 1 Score: 218.394 bits (555), Expect = 9.677e-66 Identity = 133/352 (37.78%), Postives = 192/352 (54.55%), Query Frame = 0 Query: 95 RTIVHIDMDAFYAAVEMRDDPALKIKPMAVG---GMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLTDTLTALAGTSDCQTMV-EEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDLYERRALLKLLFSDISFQSFMRIALGLGSNHPSDWNEQGRKSMSTETTF-RDTSSVEVLHGICTTICQELAQDLQKHSLQGRSVTLKIKTHKFQIKTKVRHLPEPTSQANLIEKAAQKILKQFEDNAEEKPLT--LRLMGVRMSGW 439 R IVHIDMDAFYA+V+ RDDP+L+ +P+AVG G+++ ++Y AR+FGVR+ MP AK+LCP+L+ V F Y+ VS + +F Y P P+SLDEAYLDLTD L G T+V + IR I T LTASAG++ N LAK+ SD +KP+G F + P + FV L + GIG + + ++G+ T DL ER ++ L + + G +H + RKS+ TE T+ RD +S H T I L Q+ LQ R+VTLK+K F+ T+ R L P ++ + Q ++ A P +RL+G+ +SG+ Sbjct: 4 RRIVHIDMDAFYASVKQRDDPSLRGRPLAVGRGEARGVVAAASYEARRFGVRSAMPSVTAKRLCPELLFVPARFDVYRSVSAQIHDIFSRYTPLIQPLSLDEAYLDLTDHL----GAYGSATLVADRIRADIHAETGLTASAGVSYNRFLAKLASDYRKPDGLFVITPAMG--PEFVAALPVDAFHGIGPAMARKMRALGIETGADLRERD--IETLTRHFGKAATFYYGISRGIDHRPVVVNRERKSLGTEQTYLRDLTSEADAHQALTQIAATLWGSAQRRQLQARTVTLKVKYADFRQITRARTLSAPVPSEEVLLETGQSLM------APLFPFVPGVRLLGLTLSGF 341
BLAST of dna polymerase kappa vs. SwissProt
Match: gi|81626453|sp|Q6MA55.1|DPO4_PARUW (RecName: Full=DNA polymerase IV; Short=Pol IV) HSP 1 Score: 215.698 bits (548), Expect = 1.027e-64 Identity = 125/288 (43.40%), Postives = 181/288 (62.85%), Query Frame = 0 Query: 95 RTIVHIDMDAFYAAVEMRDDPALKIKPMAVGG----MGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLTDTLTALAGTSDCQTMVEEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDL--YERRALLKLLFSDISFQSFMRIALGLGSNHPSDWNEQGRKSMSTETTF-RDTSSVEVLHGICTTICQELAQDLQKHSLQ 375 R I+HIDMDAFYA+VEMRDDP+L +KP+AVGG G+++T+NYLARKFGVR+ MP + AK+LCPDL+I+ P+F KY+ S + +F + P+SLDEA+LD+TD + AL G++ + +EIR I LTASAG+A N LAKV SD KPNGQF L P + + F+ L + K+ GIG+V + L+S+G+ C DL + L KL S +++ L G +H +++ RKS+S E+TF D +++E+ + + + L +K S Q Sbjct: 4 RKIIHIDMDAFYASVEMRDDPSLVLKPIAVGGDPDKRGVIATANYLARKFGVRSAMPSWKAKQLCPDLIILFPDFDKYKRESKAIHEIFHLFTDLIEPLSLDEAFLDVTD-VDALRGSATW--IAQEIRQLIWKERGLTASAGVAPNKFLAKVASDWHKPNGQFVLTP--KEVDAFMVHLPVEKIFGIGHVMAKKLHSLGLMNCGDLQTLDITTLQKLFGS----RAWNLYELCRGIDHRFVISDRIRKSLSVESTFLEDLNNLELCYQEIPNLIERLMIRYEKISNQ 282
BLAST of dna polymerase kappa vs. SwissProt
Match: gi|24211642|sp|Q8PCW8.1|DPO4_XANCP (RecName: Full=DNA polymerase IV; Short=Pol IV >gi|81304097|sp|Q4UQI2.1|DPO4_XANC8 RecName: Full=DNA polymerase IV; Short=Pol IV) HSP 1 Score: 214.542 bits (545), Expect = 3.667e-64 Identity = 136/364 (37.36%), Postives = 209/364 (57.42%), Query Frame = 0 Query: 95 RTIVHIDMDAFYAAVEMRDDPALKIKPMAV---GGMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLTDTLTALAGTSDCQTMVEEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDLYERRALLKLLFSDISF-QSFMRIALGLGSNHPSDWNEQGRKSMSTETTFRDTSSVEVLHGICTTICQELAQDLQKHSLQGRSVTLKIKTHKFQIKTKVRHLPE--PTSQANLIEKAAQKILKQFEDNAEEKPLTLRLMGVRMSGWDGNSGQQSISSFL 452 R IVH+DMDAFYA+VE RDDP+L+ KP+ V G ++ ++Y AR FG+R+ MP A++LCPD V V P+F +Y+ VS VR +F + P+SLDEAYLD+T+ T + ++ + IR +I + TQLTASAGIA N LAK+ SD +KP+GQF +AP + F+ L + ++ G+G V + L ++G+ T DL R L +L SF QS R A G+ P + +Q +S+S+E TF + +++ L + ++ ++ GR+V LK+KT F+I T+ + PE P S L++ A + ++ E E + RL+GV +SG+ Q ++ L Sbjct: 2 RKIVHVDMDAFYASVEQRDDPSLRGKPVVVAWRGARSVVCAASYEARTFGIRSAMPAVRAERLCPDAVFVPPDFARYKAVSRQVREIFHRHTDLVEPLSLDEAYLDVTEAKTGMQLATEIAQL---IRTQIREETQLTASAGIAPNKFLAKIASDWRKPDGQFVIAPS--RVDAFLLPLPVNRIPGVGKVMDGKLAALGIVTVSDL-RLRPLEELQAHFGSFGQSLYRRARGI-DERPVE-PDQEVQSVSSEDTFSEDLALDALDPHIQRLAEKTWHATRRTERIGRTVVLKLKTSNFRILTR-SYTPEQPPASLQGLVD-IALGLTRRVELPPETR---YRLVGVGLSGFSDPELQAAVQGEL 352
BLAST of dna polymerase kappa vs. SwissProt
Match: gi|123584151|sp|Q3BP42.1|DPO4_XANC5 (RecName: Full=DNA polymerase IV; Short=Pol IV) HSP 1 Score: 213.386 bits (542), Expect = 8.948e-64 Identity = 134/351 (38.18%), Postives = 205/351 (58.40%), Query Frame = 0 Query: 95 RTIVHIDMDAFYAAVEMRDDPALKIKPMAV---GGMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLTDTLTALAGTSDCQTMVEEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDLYERRALLKLLFSDISF-QSFMRIALGLGSNHPSDWNEQGRKSMSTETTFRDTSSVEVLHGICTTICQELAQDLQKHSLQGRSVTLKIKTHKFQIKTKVRHLPE--PTSQANLIEKAAQKILKQFEDNAEEKPLTLRLMGVRMSGW 439 R IVH+DMDAFYA+VE RDDP L+ KP+ V G ++ ++Y AR FG+R+ MP A++LCPD + V P+F +Y+ VS VR +F + P+SLDEAYLD+T T + ++ + IR +I + TQLTASAGIA N LAK+ SD +KP+GQF +AP + F+ L + ++ G+G V + L ++G+ T DL + R L +L SF QS R A G+ P + +Q +S+S+E TF + +++ L + ++ ++ GR+V LK+KT F+I T+ + PE PTSQ L + A + ++ E + + RL+GV +SG+ Sbjct: 2 RKIVHVDMDAFYASVEQRDDPGLRGKPVVVAWRGARSVVCAASYEARTFGIRSAMPAVRAERLCPDAIFVPPDFARYKAVSRQVREIFHRHTDLVEPLSLDEAYLDVTHAKTGMQLATEVAQL---IRTQIREETQLTASAGIAPNKFLAKIASDWRKPDGQFVIAP--SRVDAFLLPLKVNRIPGVGKVMDGKLAALGIVTVADLRQ-RPLEELQAHFGSFGQSLYRRARGI-DERPVE-PDQEVQSVSSEDTFSEDLALDALDPHILRLAEKTWLATRRTERIGRTVVLKLKTSNFRILTR-SYTPEQPPTSQEALAQ-IALALTRRVELPTQTR---YRLVGVGLSGF 339
BLAST of dna polymerase kappa vs. SwissProt
Match: gi|24211643|sp|Q8PGJ4.1|DPO4_XANAC (RecName: Full=DNA polymerase IV; Short=Pol IV) HSP 1 Score: 213.001 bits (541), Expect = 1.192e-63 Identity = 134/351 (38.18%), Postives = 206/351 (58.69%), Query Frame = 0 Query: 95 RTIVHIDMDAFYAAVEMRDDPALKIKPMAV---GGMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLTDTLTALAGTSDCQTMVEEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDLYERRALLKLLFSDISF-QSFMRIALGLGSNHPSDWNEQGRKSMSTETTFRDTSSVEVLHGICTTICQELAQDLQKHSLQGRSVTLKIKTHKFQIKTKVRHLPE--PTSQANLIEKAAQKILKQFEDNAEEKPLTLRLMGVRMSGW 439 R IVH+DMDAFYA+VE RDDP+L+ KP+ V G ++ ++Y AR FG+R+ MP A++LCPD + V P+F +Y+ VS VR +F + P+SLDEAYLD+T T + ++ + IR +I + TQLTASAGIA N LAK+ SD +KP+GQF +AP + F+ L + ++ G+G V + L ++G+ T DL + R L +L SF QS R A G+ P + +Q +S+S+E TF + +++ L + ++ ++ GR+V LK+KT F+I T+ + PE PTSQ L + A + ++ E A+ + RL+GV + G+ Sbjct: 2 RKIVHVDMDAFYASVEQRDDPSLRGKPVVVAWRGARSVVCAASYEARIFGIRSAMPAVRAERLCPDAIFVPPDFTRYKAVSRQVREIFHRHTDLVEPLSLDEAYLDVTHAKTGMQLATEVAQL---IRTQIREETQLTASAGIAPNKFLAKIASDWRKPDGQFVIAPS--RVDAFLLPLKVNRIPGVGKVMDGKLAALGIVTVADLRQ-RPLEELQAHFGSFGQSLYRRARGI-DERPVE-PDQEVQSVSSEDTFSEDLALDALAPHILRLAEKTWLATRRTERIGRTVVLKLKTSNFRILTR-SYTPEQPPTSQEALAQ-IALALTRRVELPAQTR---YRLVGVGLGGF 339
BLAST of dna polymerase kappa vs. nr
Match: gi|1325270656|ref|XP_023319922.1| (DNA polymerase kappa-like isoform X2 [Eurytemora affinis] >gi|1325270658|ref|XP_023319923.1| DNA polymerase kappa-like isoform X2 [Eurytemora affinis] >gi|1325270660|ref|XP_023319924.1| DNA polymerase kappa-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 478.404 bits (1230), Expect = 1.652e-159 Identity = 255/496 (51.41%), Postives = 334/496 (67.34%), Query Frame = 0 Query: 12 LMALNDTKAGMEGLDKAKIEAIIEENSKGSKFYQAKLKSQERITEQVTKMKTSWENLTQHKIDKALAEADRLVEDLRSSRDLSRTIVHIDMDAFYAAVEMRDDPALKIKPMAVGGMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLTDTLTALAGTSDCQTMVEEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDLYERRALLKLLFSDISFQSFMRIALGLGSNHPSDWNEQGRKSMSTETTFRDTSSVEVLHGICTTICQELAQDLQKHSLQGRSVTLKIKTHKFQIKTKVRHLPEPTSQANLIEKAAQKILKQFEDNAE---EKPLTLRLMGVRMSGWDGNSGQ---------------------QSIS------------SFLNAKRDSSKSFECPICLKDI 471 LM+LND KAGM GLDK KI II+ SKGSKFY + ++Q RI Q+ ++ LT ++ A EAD +++L + DL+RT+VH+DMD FYAAVEMRD+P L+ KPMAVGGMGMLSTSNY ARKFGVRA MPGFI KKLCP+LVIV N +KY VS +VR VF+EYD NF PMSLDEAY+D+T+ L L G S+ +V+E+R KIE+RTQLTASAGIA+NT LAKVCSD KPNGQ+ L + I FV++L IRK SGIGNV EQ+L S+GVNTC DLY +R +KLLFS +SF+++M+I+ G+G ++ RKSMS ETTF++TS +L G+C + ELA+++++ + G++VT+KIK+H F KTKVR L PT++A++I A+++L ++AE ++PL LRLMGVRMS + Q IS S LN K + K +ECPICL+ I Sbjct: 49 LMSLNDNKAGMTGLDKDKINRIIQAASKGSKFYSKQQENQTRIDGQIAGLQERMLRLTPTQLLSAQHEADLYIQNLLDNIDLTRTLVHVDMDMFYAAVEMRDNPTLRNKPMAVGGMGMLSTSNYAARKFGVRAAMPGFIGKKLCPELVIVPVNMQKYAAVSQVVREVFREYDENFAPMSLDEAYMDITEYL-ELHG-SNSWDVVQEMRSKIEERTQLTASAGIASNTFLAKVCSDINKPNGQYVLPANHADILEFVNKLPIRKASGIGNVQEQLLKSLGVNTCGDLYLKRGEIKLLFSQLSFENYMQISQGIGGTRLEPREDRLRKSMSNETTFKETSDRNILIGLCEDLSNELAEEMKREEIFGQAVTIKIKSHDFYTKTKVRQLTAPTNEADIIYSCARQLLVSLLESAELQQQQPLVLRLMGVRMSDLKNKNEIKSKQSSISSFFNQIKPVAAEVQDISRTKENEIVKDEESCLNLKEE--KLYECPICLEYI 540
BLAST of dna polymerase kappa vs. nr
Match: gi|1325270654|ref|XP_023319920.1| (DNA polymerase kappa-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 477.633 bits (1228), Expect = 9.898e-159 Identity = 255/496 (51.41%), Postives = 334/496 (67.34%), Query Frame = 0 Query: 12 LMALNDTKAGMEGLDKAKIEAIIEENSKGSKFYQAKLKSQERITEQVTKMKTSWENLTQHKIDKALAEADRLVEDLRSSRDLSRTIVHIDMDAFYAAVEMRDDPALKIKPMAVGGMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLTDTLTALAGTSDCQTMVEEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDLYERRALLKLLFSDISFQSFMRIALGLGSNHPSDWNEQGRKSMSTETTFRDTSSVEVLHGICTTICQELAQDLQKHSLQGRSVTLKIKTHKFQIKTKVRHLPEPTSQANLIEKAAQKILKQFEDNAE---EKPLTLRLMGVRMSGWDGNSGQ---------------------QSIS------------SFLNAKRDSSKSFECPICLKDI 471 LM+LND KAGM GLDK KI II+ SKGSKFY + ++Q RI Q+ ++ LT ++ A EAD +++L + DL+RT+VH+DMD FYAAVEMRD+P L+ KPMAVGGMGMLSTSNY ARKFGVRA MPGFI KKLCP+LVIV N +KY VS +VR VF+EYD NF PMSLDEAY+D+T+ L L G S+ +V+E+R KIE+RTQLTASAGIA+NT LAKVCSD KPNGQ+ L + I FV++L IRK SGIGNV EQ+L S+GVNTC DLY +R +KLLFS +SF+++M+I+ G+G ++ RKSMS ETTF++TS +L G+C + ELA+++++ + G++VT+KIK+H F KTKVR L PT++A++I A+++L ++AE ++PL LRLMGVRMS + Q IS S LN K + K +ECPICL+ I Sbjct: 49 LMSLNDNKAGMTGLDKDKINRIIQAASKGSKFYSKQQENQTRIDGQIAGLQERMLRLTPTQLLSAQHEADLYIQNLLDNIDLTRTLVHVDMDMFYAAVEMRDNPTLRNKPMAVGGMGMLSTSNYAARKFGVRAAMPGFIGKKLCPELVIVPVNMQKYAAVSQVVREVFREYDENFAPMSLDEAYMDITEYL-ELHG-SNSWDVVQEMRSKIEERTQLTASAGIASNTFLAKVCSDINKPNGQYVLPANHADILEFVNKLPIRKASGIGNVQEQLLKSLGVNTCGDLYLKRGEIKLLFSQLSFENYMQISQGIGGTRLEPREDRLRKSMSNETTFKETSDRNILIGLCEDLSNELAEEMKREEIFGQAVTIKIKSHDFYTKTKVRQLTAPTNEADIIYSCARQLLVSLLESAELQQQQPLVLRLMGVRMSDLKNKNEIKSKQSSISSFFNQIKPVAAEVQDISRTKENEIVKDEESCLNLKEE--KLYECPICLEYI 540
BLAST of dna polymerase kappa vs. nr
Match: gi|1191034919|ref|XP_020894603.1| (DNA polymerase kappa-like [Exaiptasia pallida]) HSP 1 Score: 460.299 bits (1183), Expect = 3.959e-153 Identity = 242/486 (49.79%), Postives = 319/486 (65.64%), Query Frame = 0 Query: 8 IGMPLMALNDTKAGMEGLDKAKIEAIIEENSKGSKFYQAKLKSQERITEQVTKMKTSWENLTQHKIDKALAEADRLVEDLRSSRDLSRTIVHIDMDAFYAAVEMRDDPALKIKPMAVGGMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLTD-------------TLTALAGT-------------SDCQTMVEEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDLYERRALLKLLFSDISFQSFMRIALGLGSNHPSDWNEQGRKSMSTETTFRDTSSVEVLHGICTTICQELAQDLQKHSLQGRSVTLKIKTHKFQIKTKVRHLPEPTSQANLIEKAAQKILKQFEDNAEEKPLTLRLMGVRMSGWDGN----SGQQSISSFLNAKRDSSKSFE 463 +G M+LND KAGMEGLDK KI II E SKGSKFY+ ++ +E++ E++ + E+ T I +A+ +ADR+V+DL +RDLSRTIVHIDMDAFYAAVEMRDD +L+ KPMAVG GMLSTSNY+AR+FGVRA MPGFI KKLCPDL+IV NF KY+ S I+R+V ++YDPNF PMSLDEAYLDLTD T G +D Q +V+EIR +IE TQLTASAGIA N+MLAK+CSD+ KPNGQFYL D + + F+ L IRK+SGIG V+EQML ++G+ TC DL+ +R +L LL S IS + I+LGLGS E RKS+STE TF + S L+ C ++C+ +A+D L+ ++VTLK+KT FQ++++ L P + I +AA+ +L + + E KPL LRLMGVR+S ++ + + Q I+SFL + S E Sbjct: 76 VGPSRMSLNDHKAGMEGLDKEKINKIIYEASKGSKFYENEILKEEQVKERIRRQTERLESFTDDDIAEAMLQADRIVKDLEKTRDLSRTIVHIDMDAFYAAVEMRDDLSLRDKPMAVGSPGMLSTSNYVARRFGVRAAMPGFIGKKLCPDLIIVPANFAKYRTASGIIRNVLKDYDPNFLPMSLDEAYLDLTDYIKERQNQASSKRTFYKATGDPTADGSGEKFEFGNDVQEIVQEIRFRIELETQLTASAGIACNSMLAKICSDKNKPNGQFYLPSDRDAVMNFIHDLPIRKISGIGRVSEQMLKALGIATCNDLFTQRHILVLLNSSISSNFLIAISLGLGSTRLESSRE--RKSLSTERTFTELSKPAELYSECESLCKMVAEDCNDEKLKPKTVTLKLKTVNFQVRSRSVSLSFPVTNEKDIYEAAKDLLAKEIASCESKPLRLRLMGVRLSNFESSEKKXAKQDKITSFLRKDAQEASSME 559
BLAST of dna polymerase kappa vs. nr
Match: gi|999988776|gb|KXJ27846.1| (DNA polymerase kappa [Exaiptasia pallida]) HSP 1 Score: 459.529 bits (1181), Expect = 1.578e-152 Identity = 242/486 (49.79%), Postives = 320/486 (65.84%), Query Frame = 0 Query: 8 IGMPLMALNDTKAGMEGLDKAKIEAIIEENSKGSKFYQAKLKSQERITEQVTKMKTSWENLTQHKIDKALAEADRLVEDLRSSRDLSRTIVHIDMDAFYAAVEMRDDPALKIKPMAVGGMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLTDTL-----------TALAGT---------------SDCQTMVEEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDLYERRALLKLLFSDISFQSFMRIALGLGSNHPSDWNEQGRKSMSTETTFRDTSSVEVLHGICTTICQELAQDLQKHSLQGRSVTLKIKTHKFQIKTKVRHLPEPTSQANLIEKAAQKILKQFEDNAEEKPLTLRLMGVRMSGWDGN----SGQQSISSFLNAKRDSSKSFE 463 +G M+LND KAGMEGLDK KI II E SKGSKFY+ ++ +E++ E++ + E+ T I +A+ +ADR+V+DL +RDLSRTIVHIDMDAFYAAVEMRDD +L+ KPMAVG GMLSTSNY+AR+FGVRA MPGFI KKLCPDL+IV NF KY+ S I+R+V ++YDPNF PMSLDEAYLDLTD + T T +D Q +V+EIR +IE TQLTASAGIA N+MLAK+CSD+ KPNGQFYL D + + F+ L IRK+SGIG V+EQML ++G+ TC DL+ +R +L LL S IS + I+LGLGS E RKS+STE TF + S L+ C ++C+ +A+D L+ ++VTLK+KT FQ++++ L P + I +AA+ +L + + E KPL LRLMGVR+S ++ + + Q I+SFL + S E Sbjct: 102 VGPSRMSLNDHKAGMEGLDKEKINKIIYEASKGSKFYENEILKEEQVKERIRRQTERLESFTDDDIAEAMLQADRIVKDLEKTRDLSRTIVHIDMDAFYAAVEMRDDLSLRDKPMAVGSPGMLSTSNYVARRFGVRAAMPGFIGKKLCPDLIIVPANFAKYRTASGIIRNVLKDYDPNFLPMSLDEAYLDLTDYIKERQNQASSKRTFYKATGDPTADGSGEKFEFGNDVQEIVQEIRFRIELETQLTASAGIACNSMLAKICSDKNKPNGQFYLPSDRDAVMNFIHDLPIRKISGIGRVSEQMLKALGIATCNDLFTQRHILVLLNSSISSNFLIAISLGLGSTRLESSRE--RKSLSTERTFTELSKPAELYSECESLCKMVAEDCNDEKLKPKTVTLKLKTVNFQVRSRSVSLSFPVTNEKDIYEAAKDLLAKEIASCESKPLRLRLMGVRLSNFESSEKKXAKQDKITSFLRKDAQEASSME 585
BLAST of dna polymerase kappa vs. nr
Match: gi|1022767905|gb|KZS12736.1| (putative DNA polymerase IV [Daphnia magna]) HSP 1 Score: 452.21 bits (1162), Expect = 1.586e-151 Identity = 245/431 (56.84%), Postives = 296/431 (68.68%), Query Frame = 0 Query: 10 MPLMALNDTKAGMEGLDKAKIEAIIEENSKGSKFYQAKLKSQERITEQVTKMKTSWENLTQHKIDKALAEADRLVEDLRSSRDLSRTIVHIDMDAFYAAVEMRDDPALKIKPMAVGGMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLTDTLTAL--AGTS-DCQTMVEEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDLYERRALLKLLFSDISFQSFMRIALGLGSNHPSDWNEQGRKSMSTETTFRDTSSVEVLHGICTTICQELAQDLQKHSLQGRSVTLKIKTHKFQIKTKVRHLPEPTSQANLIEKAAQKILKQFEDNAEEKPLTLRLMGVRMS 437 + +M LND KAGM+GLD AKI IIEE SKGS+FYQ K K+QERI ++ +K S LT+ + + D L L RDLSRTIVH+DMDAFYAAVE+RD P LK KPMAVG ML+TSNY AR+FGVRA MPGFIAKKLCP+LVIV NF KY EVS V+ VF +YDP F SLDEAYLD+TD L A AG VEE+R KI + TQLTASAGIA N MLAKVCSD+ KPNGQF L E + F+ L IRK+SGIGNVTEQ+L ++GV+TCRDL+++R LL LLFS+ S+ F+R+ALG+GS D +E+ RKS+S ETTFR TS E L I + +LA+DL++ L GRSVTLK KT KF +KT++ L T +I KAAQ +L L LRL+GVRMS Sbjct: 18 LGVMKLNDHKAGMQGLDTAKINQIIEEASKGSQFYQHKQKNQERINAKIANLKASCAKLTEEQKKLGRFKMDNLAGKLELMRDLSRTIVHVDMDAFYAAVEIRDCPELKTKPMAVGSSAMLTTSNYHARRFGVRAAMPGFIAKKLCPELVIVPTNFPKYTEVSRQVQKVFADYDPEFSAASLDEAYLDITDFLVARKDAGAEMTAAEAVEEMRAKILESTQLTASAGIAPNGMLAKVCSDKNKPNGQFVLENTREAVMEFIKDLPIRKISGIGNVTEQLLGALGVSTCRDLWDKRELLYLLFSESSYDYFLRVALGIGS-FGGDGSERERKSVSCETTFRSTSDHEELCDIIRQLSADLARDLERLGLTGRSVTLKYKTDKFDVKTRITQLMSQTRDGAVIAKAAQGLLPV--------GLHLRLLGVRMS 439
BLAST of dna polymerase kappa vs. nr
Match: gi|961871637|ref|XP_014848368.1| (PREDICTED: DNA polymerase kappa [Poecilia mexicana]) HSP 1 Score: 457.218 bits (1175), Expect = 1.598e-149 Identity = 249/507 (49.11%), Postives = 320/507 (63.12%), Query Frame = 0 Query: 13 MALNDTKAGMEGLDKAKIEAIIEENSKGSKFYQAKLKSQERITEQVTKMKTSWENLTQHKIDKALAEADRLVEDLRSSRDLSRTIVHIDMDAFYAAVEMRDDPALKIKPMAVGGMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLTDTL------TALAGTSDCQ-------------------------------------------TMVEE----IRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDLYERRALLKLLFSDISFQSFMRIALGLGSNHPSDWNEQGRKSMSTETTFRDTSSVEVLHGICTTICQELAQDLQKHSLQGRSVTLKIKTHKFQIKTKVRHLPEPTSQANLIEKAAQKILKQFEDNAEEKPLTLRLMGVRMSGWDGNSG----QQSISSFLN-AKRDSSKS 461 MALND KAGMEGLD+ KI II E SKGS+FY+ +LK ++++ +++ KM +T+ + KA A+ +++ +L SRDLSR IVH+DMDAFYAAVEMRD P LK PMAVG M MLSTSNY ARK+GVRA MPGFIAKKLCP LVIV PNF KY+ VS +R +F EYDPNF PMSLDEAYLD TD L + T C+ T VEE +R +IE +T LTASAGIA N MLAKVCSD+ KPNGQ+ L P E + F+ +L +RKV GIG V+E+MLN++G+ TC DL + ALL LLFS+ S+ F++I+LGL S H E RKSMSTE TF++ S E +C +C +LA+DL+K +L+G++VTLKIK F++KT+ + LP + A I A+ +LK +N +PL LRLMGVR+S + + G Q+SI SFL KRD S+S Sbjct: 17 MALNDNKAGMEGLDRDKINRIIMEASKGSRFYENELKKEQQVNQRIEKMMHQKAQITEQLLQKAQAQVEKMASELEKSRDLSRVIVHVDMDAFYAAVEMRDCPELKDTPMAVGSMSMLSTSNYHARKYGVRAAMPGFIAKKLCPSLVIVPPNFDKYRAVSEEIREIFAEYDPNFQPMSLDEAYLDFTDHLEQRQSWPESSRTHRCRSRSNTPADESDKTEEGTDLSPVLFEDSPVSSEGDAAGSFEQFGTSVEEAVREMRFRIEQKTTLTASAGIAPNMMLAKVCSDKNKPNGQYRLPPTREAVMDFIQKLPVRKVCGIGKVSEKMLNALGITTCSDLSRQMALLSLLFSETSWHHFLQISLGLSSTHIPRHEE--RKSMSTERTFKELSKPEEQLSLCRELCDDLAEDLKKEALKGKTVTLKIKNVNFEVKTRAQTLPYAVATAEDIFAVAKDLLKTEIENESPQPLRLRLMGVRISAFVSSDGKTPMQKSIISFLQLGKRDHSRS 521
BLAST of dna polymerase kappa vs. nr
Match: gi|617423613|ref|XP_007559367.1| (PREDICTED: DNA polymerase kappa [Poecilia formosa]) HSP 1 Score: 456.062 bits (1172), Expect = 4.440e-149 Identity = 249/507 (49.11%), Postives = 319/507 (62.92%), Query Frame = 0 Query: 13 MALNDTKAGMEGLDKAKIEAIIEENSKGSKFYQAKLKSQERITEQVTKMKTSWENLTQHKIDKALAEADRLVEDLRSSRDLSRTIVHIDMDAFYAAVEMRDDPALKIKPMAVGGMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLTDTL------TALAGTSDCQ-------------------------------------------TMVEE----IRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDLYERRALLKLLFSDISFQSFMRIALGLGSNHPSDWNEQGRKSMSTETTFRDTSSVEVLHGICTTICQELAQDLQKHSLQGRSVTLKIKTHKFQIKTKVRHLPEPTSQANLIEKAAQKILKQFEDNAEEKPLTLRLMGVRMSGWDGNSG----QQSISSFLN-AKRDSSKS 461 MALND KAGMEGLD+ KI II E SKGS+FY +LK ++++ +++ KM +T+ + KA A+ +++ +L SRDLSR IVH+DMDAFYAAVEMRD P LK PMAVG M MLSTSNY ARK+GVRA MPGFIAKKLCP LVIV PNF KY+ VS +R +F EYDPNF PMSLDEAYLD TD L + T C+ T VEE +R +IE +T LTASAGIA N MLAKVCSD+ KPNGQ+ L P E + F+ +L +RKV GIG V+E+MLN++G+ TC DL + ALL LLFS+ S+ F++I+LGL S H E RKSMSTE TF++ S E +C +C +LA+DL+K +L+G++VTLKIK F++KT+ + LP + A I A+ +LK +N +PL LRLMGVR+S + + G Q+SI SFL KRD S+S Sbjct: 17 MALNDNKAGMEGLDRDKINRIIMEASKGSRFYGNELKKEQQVNQRIEKMMHQKAQITEQLLQKAQAQVEKMTSELEKSRDLSRVIVHVDMDAFYAAVEMRDCPELKDTPMAVGSMSMLSTSNYHARKYGVRAAMPGFIAKKLCPSLVIVPPNFDKYRAVSEEIREIFAEYDPNFQPMSLDEAYLDFTDHLEQRQSWPESSRTHRCRSRSNTPADESDKTEEGTDLSPVLFEDSPVSSEGDAAGSFEQFGTSVEEAVREMRFRIEQKTTLTASAGIAPNMMLAKVCSDKNKPNGQYRLPPTREAVMDFIQKLPVRKVCGIGKVSEKMLNALGITTCSDLSRQMALLSLLFSETSWHHFLQISLGLSSTHIPRHEE--RKSMSTERTFKELSKPEEQLSLCRELCDDLAEDLKKEALKGKTVTLKIKNVNFEVKTRAQTLPYAVATAEDIFAVAKDLLKTEIENESPQPLRLRLMGVRISAFVSSDGKTPMQKSIISFLQLGKRDHSRS 521
BLAST of dna polymerase kappa vs. nr
Match: gi|321460481|gb|EFX71523.1| (hypothetical protein DAPPUDRAFT_31218, partial [Daphnia pulex]) HSP 1 Score: 439.499 bits (1129), Expect = 1.948e-148 Identity = 234/415 (56.39%), Postives = 286/415 (68.92%), Query Frame = 0 Query: 5 SSGIGMPLMALNDTKAGMEGLDKAKIEAIIEENSKGSKFYQAKLKSQERITEQVTKMKTSWENLTQHKIDKALAEADRLVEDLRSSRDLSRTIVHIDMDAFYAAVEMRDDPALKIKPMAVGGMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLTDTLTALAGTSDCQT---MVEEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDLYERRALLKLLFSDISFQSFMRIAL-GLGSNHPSDWNEQGRKSMSTETTFRDTSSVEVLHGICTTICQELAQDLQKHSLQGRSVTLKIKTHKFQIKTKVRHLPEPTSQANLIEKAAQKIL 415 SS + +M LND KAGM+GLD AKI IIEE SKGS+FYQ K K+QERI ++ +K + LT+ + A A+ D L + L +RDLSRT+VH+DMDAFYAAVEMRD P LK KPMAVG ML+TSNYLAR+FGVRA MPGFIAKKLCP+LVIV NF KY EVS V+ VF +YDP F SLDEAYLDLTD L A + T VEE+R KI + TQLTASAGIA N MLAKVCSD+ KPNGQF L E + F+ L IRK+SGIGNVTEQ+L S+G++TCRDL+ +R LL LLFS+ S+ F+R+AL D +E+ RKS+S ETTFR TS L I + +LA+DL++H GRSVTLK KT KF +KT++ L T ++ KAA +L Sbjct: 9 SSHENLSIMKLNDHKAGMQGLDTAKINQIIEEASKGSQFYQHKQKNQERIDAKIANLKAACAKLTEEQKKMARAKMDSLAQKLELTRDLSRTMVHVDMDAFYAAVEMRDCPELKTKPMAVGSSSMLTTSNYLARRFGVRAAMPGFIAKKLCPELVIVPTNFPKYTEVSRQVQKVFADYDPEFSAASLDEAYLDLTDFLCARKESGAEMTASEAVEEMRAKILESTQLTASAGIAPNGMLAKVCSDKNKPNGQFILGNSKEAVDEFIKDLPIRKISGIGNVTEQLLGSLGISTCRDLWNQRELLYLLFSESSYDYFLRVALGIGSGGGGGDGSERERKSVSCETTFRSTSDRNELCDIIRQLSADLARDLERHGRLGRSVTLKYKTDKFDVKTRITQLTGYTGDGEVMAKAATSLL 423
BLAST of dna polymerase kappa vs. nr
Match: gi|1199345392|ref|XP_021171495.1| (DNA polymerase kappa [Fundulus heteroclitus]) HSP 1 Score: 454.136 bits (1167), Expect = 7.193e-148 Identity = 241/493 (48.88%), Postives = 315/493 (63.89%), Query Frame = 0 Query: 13 MALNDTKAGMEGLDKAKIEAIIEENSKGSKFYQAKLKSQERITEQVTKMKTSWENLTQHKIDKALAEADRLVEDLRSSRDLSRTIVHIDMDAFYAAVEMRDDPALKIKPMAVGGMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLT----------------------------------------DTLTALAGT---------SDCQTMVEEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDLYERRALLKLLFSDISFQSFMRIALGLGSNHPSDWNEQGRKSMSTETTFRDTSSVEVLHGICTTICQELAQDLQKHSLQGRSVTLKIKTHKFQIKTKVRHLPEPTSQANLIEKAAQKILKQFEDNAEEKPLTLRLMGVRMSGW----DGNSGQQSISSFL 452 MALND KAGMEGLD+ KI II E SKGS+FY+ +LK ++++ +++ KM LT+ ++ +A A+ +++ +L SRDLSR IVH+DMDAFYAAVEMRD P LK KPMAVG M MLSTSNY ARK+GVRA MPGFIAK+LCP LVIV NF KY+ VS VR +F EYDPNF PMSLDEAYLD T D+L++ G + + V E+R +IE +T LTASAGIA N MLAKVCSD+ KPNGQ+ L P E + F +L +RKV GIG V+E+MLN++G+ TC DL +R ALL LLFS+ S+ F++I+LGL S H E RKSMSTE TF++ S E +C +C++LA DL+K +L+G++VTLK+K F++KTK + LP + A I A+++LK ++ +PL LRLMGVR+S + D Q+SI SFL Sbjct: 17 MALNDNKAGMEGLDRDKINRIIMEASKGSRFYENELKKEQQVNQRIEKMMQQKTRLTEQQLQRAQAQVEKMASELERSRDLSRAIVHVDMDAFYAAVEMRDSPELKDKPMAVGSMSMLSTSNYHARKYGVRAAMPGFIAKRLCPGLVIVPLNFDKYRAVSEEVREIFAEYDPNFQPMSLDEAYLDFTAHLEQRQSWPESLRTHRYRSRSNTPAETVEGADLSPVLFEDSLSSSGGDAGGPSEVFGTSVEEAVREMRFRIEQKTTLTASAGIAPNMMLAKVCSDKNKPNGQYRLPPTREAVMDFTQKLPVRKVCGIGKVSEKMLNALGITTCSDLSQRMALLSLLFSETSWHHFLQISLGLSSTHIPRHEE--RKSMSTERTFKELSKPEEQFSLCRELCEDLADDLKKEALKGKTVTLKLKNVNFEVKTKAQTLPYAVATAEDIFAVAKELLKMEIESESPQPLRLRLMGVRISAFVSSDDKTPMQKSIISFL 507
BLAST of dna polymerase kappa vs. nr
Match: gi|658868380|ref|XP_008417080.1| (PREDICTED: DNA polymerase kappa [Poecilia reticulata]) HSP 1 Score: 452.21 bits (1162), Expect = 1.258e-147 Identity = 247/515 (47.96%), Postives = 324/515 (62.91%), Query Frame = 0 Query: 13 MALNDTKAGMEGLDKAKIEAIIEENSKGSKFYQAKLKSQERITEQVTKMKTSWENLTQHKIDKALAEADRLVEDLRSSRDLSRTIVHIDMDAFYAAVEMRDDPALKIKPMAVGGMGMLSTSNYLARKFGVRAGMPGFIAKKLCPDLVIVGPNFKKYQEVSTIVRSVFQEYDPNFCPMSLDEAYLDLT--------------------------------------------DTLTALAGTS---------DCQTMVEEIRHKIEDRTQLTASAGIAANTMLAKVCSDQKKPNGQFYLAPDVETISRFVDRLSIRKVSGIGNVTEQMLNSIGVNTCRDLYERRALLKLLFSDISFQSFMRIALGLGSNHPSDWNEQGRKSMSTETTFRDTSSVEVLHGICTTICQELAQDLQKHSLQGRSVTLKIKTHKFQIKTKVRHLPEPTSQANLIEKAAQKILKQFEDNAEEKPLTLRLMGVRMSGW----DGNSGQQSISSFLN-AKRDSSKSFECPICLK 469 MALND KAGMEGLD+ KI II E SKGS+FY+ +LK ++++ +++ KM +++ + KA A+ +++ +L SRDLSR IVH+DMDAFYAAVEMRD P LK KPMAVG M MLSTSNY ARK+GVRA MPGFIAKKLCP LVIV PNF KY+ VS +R +F EYDPNF P+SLDEAYLD T D+L + G + + V E+R +IE +T LTASAGIA N MLAKVCSD+ KPNGQ+ LAP + + F+ +L +RKV GIG V+E+MLN++G+ TC DL + ALL LLFS+ S+ F++I+LGL S H E RKSMSTE TF++ S E +C +C +LA+DL+K +L+G++VTLKIK F++KT+ + LP ++A I A+ +LK +N +PL LRLMGVR+S + D Q+SI SFL K D S+S PI L+ Sbjct: 17 MALNDNKAGMEGLDRDKINRIIMEASKGSRFYENELKKEQQVNQRIEKMMHQKAQISEQLLQKAQAQVEKMASELEKSRDLSRVIVHVDMDAFYAAVEMRDCPELKDKPMAVGSMSMLSTSNYHARKYGVRAAMPGFIAKKLCPSLVIVPPNFDKYRAVSEEIREIFSEYDPNFQPVSLDEAYLDFTDHLEQRQRWPESSRTHRCRSRSNTPADESDQTEEGTDLSPVLFEDSLVSSEGDAAGSFEQFGMSVEEAVREMRFRIEQKTTLTASAGIAPNMMLAKVCSDKNKPNGQYRLAPTRQAVMDFMQKLPVRKVCGIGKVSEKMLNALGITTCSDLSRQMALLSLLFSETSWHHFIQISLGLSSTHIPRHEE--RKSMSTERTFKELSKPEEQLSLCRELCDDLAEDLKKEALKGKTVTLKIKNVNFEVKTRAQTLPYAVARAEDIFAVAKDLLKTEIENESPQPLRLRLMGVRISSFVCSDDKIPMQKSIISFLQPGKTDRSRS--SPITLQ 527 The following BLAST results are available for this feature:
BLAST of dna polymerase kappa vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of dna polymerase kappa vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of dna polymerase kappa vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1013_size70870:25338..27756- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1013_size70870-snap-gene-0.18 ID=maker-scaffold1013_size70870-snap-gene-0.18|Name=dna polymerase kappa|organism=Tigriopus kingsejongensis|type=gene|length=2419bp|location=Sequence derived from alignment at scaffold1013_size70870:25338..27756- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'dna polymerase kappa' has the following synonyms
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