abc transporter atp-binding protein, maker-scaffold103_size370364-snap-gene-0.20 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000007957 (supercontig:LSalAtl2s:LSalAtl2s470:149271:204921:1 gene:EMLSAG00000007957 transcript:EMLSAT00000007957 description:"maker-LSalAtl2s470-snap-gene-2.20") HSP 1 Score: 174.096 bits (440), Expect = 1.748e-49 Identity = 131/421 (31.12%), Postives = 207/421 (49.17%), Query Frame = 0 Query: 125 EKTFVVLYKVEDKMNQFYLLLVKESLASEDVANLSKENIKDCHEIVQAFKTSNACYTSYFYRTLMEILGSSGLIAMFSYYNGINGLGVRFFDCNVYGHLFECLVPNSQFFMYVYVMAFVLIGVYLLCSVYNFIWILSARVGVLSKF-------LDGCH--------------------RQTDSYTEHLKDIQKPIVR--LKLYFKPKAEDFSLLMNLLAESQGLPDALRVLSLFEHQFSMLWEPTNIRLIQKRNSVEHLVVENEGEEKKADIPESKMERESSPQTLIVAWDDANIAEYFFQCFKKKYTLEYSVEISPE--TEVPIKSILYYKDSSWMKCEELE-------LLAHDSLQEKTPMNIPRKYSLSF--------DGLEAGQT-----------YKLTFSTEVDGRTVAQMIRLF 488 E + +K+ QFY LLV+ESL EDV +LS++NIK+ HEI+Q+F+ SN CY SY RT +EI+ S GL ++ + GI L + +C+V+G C++PN QF+ Y+ + L+ +Y+LC+ YN IWI+ ++G + + L G H Y+ + + L +YF + +D LL+NLLAE+ GLP++ R+L+LF+ +F LW+P N+R+ E+ V + GE+ + + W+DA I +F + + EY+V+ISP E+ +KSILY +D + E+ L +S + N +Y ++F DG E +T LT STE++GRTV QM+ F Sbjct: 8 ESHIGTTFAAGNKIKQFYDLLVEESLRREDVDSLSRDNIKNLHEIMQSFRFSNVCYWSYLSRTCLEIVLSIGLFLIYWCW-GIPNL-LPEIECDVHGLAHSCVLPNHQFYFYILAASTALLCIYILCNTYNLIWIICPQLGTMYRVIKSYQDCLGGVHPSDPGGIDLIGSKKKRNAVNHSHGPYSNKYRKVSNITTDNFLNVYFDRRHKDLKLLLNLLAETSGLPESFRILTLFDKKFQSLWKPQNLRI------EEYETVISNGEK---------------TLNINIKWNDAPIG-HFLTNYDSSLSFEYTVDISPSPLNELGLKSILYKRDEDSIINGEIAKGSSSQSLSLLESQGDIHGSNTKHRYEVNFENIIHGDEDGEELDRTGGGRVSDGSIFVTLTISTELNGRTVTQMVEKF 404
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000012288 (supercontig:LSalAtl2s:LSalAtl2s898:49197:60162:1 gene:EMLSAG00000012288 transcript:EMLSAT00000012288 description:"maker-LSalAtl2s898-augustus-gene-0.17") HSP 1 Score: 172.17 bits (435), Expect = 1.983e-49 Identity = 128/359 (35.65%), Postives = 187/359 (52.09%), Query Frame = 0 Query: 141 FYLLLVKESLASEDVANLSKENIKDCHEIVQAFKTSNACYTSYFYRTLMEILGSSGLIAMFSYYNGINGLGVRFFDCNVYGHLFECLVPNSQFFMYVYVMAFVLIGVYLLCSVYNFIWILSARVGVLSKFLDGCHRQTDSYTEHLKDIQKPIVRLKLYFKPKAEDFSLLMNLLAESQGLPDALRVLSLFEHQFSMLWEPTN---IRLIQKRNSVEHLVVENEGEEKKADIPESKMER----ESSPQTLIVAWDDANIAEYFFQCFKKKYTLEYSVEISPETEVPIKSILYYK--DSSWMKCE---ELELL-AHDSLQEKTPMNIPR--KYSLSFDGLEAGQTYKLTFSTEVDGRTVAQM 484 FY +++K++L EDV+ + ENIK+ +EI Q+F+ S+ CY SY Y T+ E+ S L F + I+G+ F+C V+ F C++PN +FF ++ A L+ +Y + +Y +WIL RVG L K L GC R + I L Y ++ F LL R LS H ++ + P IRL +S E L+ E E+K S ER E T+IV W+DA AEY ++ K LEY+ EISP TE P+KS LYY D S K E + +L+ A++ + + N+ R KY+ FDGLE+G+ Y ++ STEVDGRT+ Q+ Sbjct: 2 FYSMILKDNLEREDVSCMEIENIKNSNEIQQSFRNSSGCYYSYLYSTICEVFASFLLEYFFCSFRKIDGISGATFECLVHNLPFICIIPNCKFFWAMFYSAQSLLVLYNISCIYALVWILYPRVGRLQKILSGCRRLENKVI---------INGLGSY----SDTFKLL------------PTRNLSTTAHSTNLSFLPRKIPVIRLDMYYDSKECLLSEQHNSEEKESSSPSSFERKHPCEKLTSTIIVFWNDALFAEYMYKKDNSKSILEYTAEISPNTEAPVKSFLYYSIPDLSDQKMEIERKKDLINANNFSKGEVENNMKRWYKYNARFDGLESGKEYVISISTEVDGRTITQV 335
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000000417 (supercontig:LSalAtl2s:LSalAtl2s1066:3766:7361:-1 gene:EMLSAG00000000417 transcript:EMLSAT00000000417 description:"maker-LSalAtl2s1066-snap-gene-0.5") HSP 1 Score: 141.354 bits (355), Expect = 2.154e-37 Identity = 132/477 (27.67%), Postives = 221/477 (46.33%), Query Frame = 0 Query: 17 MAAIAGE-LSKQIKGHSEGAQGFRPWWDTVEDNIMYAFVILGMITLPMTFFSKTPIECTPHPRDWENVTEIKGLSRFYPKVYCTEMMIEPFLLYLPFTLLMVPIVLTAIEKTFVVLYKVEDKMNQFYLLLVKESLASE-DVANLSKENIKDCHEIVQAFKTSNACYTSYFYRTLMEILGSSGLIAMFSYYNGINGLGVRFFD---CNVYGHLFECLVPNSQFFMYVY-VMAFVLIGVYLLCSVYNFIWILSARVGVLSKFLDGCHRQTDSYTEHLKDIQKPIVRLKLYFKPKAEDFSLLMNLLAESQGLPDALRVLSLFEHQFSMLWEPTNIRLIQKRNSVEHLVVENEGEEKKADIPESKMERESSPQTLIVAWDDANIAEYFFQCFKKKYTLEYSVEISPETEVPIKSILYYKDSSWMKCEELELLAHDSLQEKTPMNIPR-KYSLSFDGLEAGQTYKLTFSTEVDGRTVAQMIR 486 MA I G L + GH++ + FRPWWD +ED F++ G+ T C P ++ E G + YCT M ++ F+LY P+ LL + +L IE+ F ++K + K++ FY L+ KE+L + + E KDC E++ +F+ SN + SY YRT++E++ + L A+ Y G++ L R D CNV+G +EC QF+ V + F+LIG Y+LC+ YN +W+ G +S F+ + S H +LY+ + +L+++LLAE+ GL +LR+L LF+ F EP N+ VE L E + E+ R+ + ++ + Y+VE P T+ +I + ++ +L+ NI Y+ +E Q Y + ST ++G+TVA++++ Sbjct: 1 MATIFGNALLGKALGHTDAQKAFRPWWDVLED-----FLVYGLGT------------C---PDEYVKSDEKAGFQWRWVLKYCTVMALDRFILYFPYILLGIGFLLIGIERMFTRIFKADRKVDLFYSLIAKEALENPYEEGEELIEESKDCIEVLYSFRKSNNFFKSYLYRTIVELVVAIFLFALLIVY-GVSSL--RKGDIVYCNVHGIYYECAGIYPQFYGVVLGTVLFILIG-YMLCTSYNLVWLXIPYFGKMS-FMMKSLKNFGSTDIH-----------ELYYNNRDL--ALMLDLLAENSGLAPSLRILGLFDKDFRSTIEPINVL-------VERLSGAGGDLEIRVKFEEAVNARKLMNNSKLIP------------------NILYTVETKPHTKS--SAIETFSSATEQSIHPRKLMIDSEGSGSEMQNIQGINYTSVIRDVEPKQAYTICISTIINGKTVARVLQ 412
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000004985 (supercontig:LSalAtl2s:LSalAtl2s260:258619:261296:-1 gene:EMLSAG00000004985 transcript:EMLSAT00000004985 description:"maker-LSalAtl2s260-augustus-gene-2.19") HSP 1 Score: 119.398 bits (298), Expect = 2.351e-29 Identity = 75/243 (30.86%), Postives = 127/243 (52.26%), Query Frame = 0 Query: 17 MAAIAGELSKQIKGHSEGAQGFRPWWDTVEDNIMYAFVILGMITLPMTFFSKTPIEC----------------TPHPRDWENVTEIKGLSRFYPKVYCTEMMIEPFLLYLPFTLLMVPIVLTAIEKTFVVLYKVEDKMNQFYLLLVKESLASEDVANLSKE------NIKDCHEIVQAFKTSNACYTSYFYRTLM-EILGSSGLIAMFSYYNGINGLGV-RFFDCNVYGHLFECLVPNSQFFM 235 MA++ L +I GHS + FRPWWD +ED ++Y V+LG+I P + TP++C T H RD EN G + + K YCT ++ F+LY P+ LL++ +V+ IE+ F+ +++ K++ FY L+ K +E+ N+ ++ N + E++ +F +++ + SY RT++ IL S LI + S GI + F CNV+G +EC +F++ Sbjct: 1 MASLGNALVTKILGHSAAEKAFRPWWDNLEDFLVYGLVMLGLIVAPTAIINGTPLDCNFCAEEDCRIYFNRTNTSH-RDPEN----PGYNSLWVKKYCTMXAVDGFILYFPYLLLIMALVIVLIERVFLRIFRAGLKLDAFYSLVQKNLEDAEEEFNVDEKEYDDSVNNRTAIEVLHSFTSNSNYFASYMVRTIIVTILASILLIWLISM--GIPSMQKDEFIYCNVHGFHYECAGHPQEFYI 236
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000004987 (supercontig:LSalAtl2s:LSalAtl2s260:275131:279121:1 gene:EMLSAG00000004987 transcript:EMLSAT00000004987 description:"maker-LSalAtl2s260-augustus-gene-2.17") HSP 1 Score: 97.0561 bits (240), Expect = 2.820e-22 Identity = 58/199 (29.15%), Postives = 104/199 (52.26%), Query Frame = 0 Query: 17 MAAIAGELSKQIKGHSEGAQGFRPWWDTVEDNIMYAFVILGMITLPMTFFSKTPIEC----------------TPHPRDWENVTEIKGLSRFYPKVYCTEMMIEPFLLYLPFTLLMVPIVLTAIEKTFVVLYKVEDKMNQFYLLLVKE-SLASEDVANLSKE-----NIKDCHEIVQAFKTSNACYTSYFYRTLMEILG 193 MA++ L +I GHSE + FRPWWD +ED ++Y V+LG+I P + TP++C T H RD E + ++ K YCT ++ F+LY P+ LL++ +++ IE+ F+ +++ K+ FY L+ K+ ED ++ +++ N K E++ +F +S+ + Y R+L ++ Sbjct: 1 MASLGNALVNKILGHSEAEKAFRPWWDNLEDFLVYGLVMLGLIVAPTAIINGTPLDCNFCTEDGCKDYFERTNTSH-RD----AEPPDYNFWWVKKYCTMTAVDGFILYFPYILLIMALMIVLIERVFIRIFQAGLKLEAFYSLIQKDIEETQEDFSSTNQDVEESINNKTAIEVLHSFSSSSXFFVCYLVRSLSRVMS 194
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Match: EMLSAG00000010454 (supercontig:LSalAtl2s:LSalAtl2s693:113876:130307:1 gene:EMLSAG00000010454 transcript:EMLSAT00000010454 description:"snap_masked-LSalAtl2s693-processed-gene-1.5") HSP 1 Score: 69.3218 bits (168), Expect = 1.023e-12 Identity = 97/422 (22.99%), Postives = 163/422 (38.63%), Query Frame = 0 Query: 38 FRPWWDTVEDNIMYAFVILGMITLPMTFFSK---TPIECT-------------PHPRDWENVTEIKGLSRFYPKVYCTEMMIEPFLLYLPFTLLMVPIVLTAIEKTFVVLYKVEDKMNQFYLLLVKESL------ASEDVAN--LSKENIK---DCHEIVQAFKTSNACYTSYFYRTLMEILGSSGLIAMFSYY----------------NGINGL-GVRFFDCNVYGHLFECLVPNSQFFMYVYVMAFVLIGVYLLCSVYNFIWILSARVGVLSKFLDGCHRQTDSYTEHLKDIQKPIVRL---KLYFKPKAEDFSLLMNLLAESQGLPDALRV---------------------LSLFEHQFSMLWEPTNIRLIQKRNSV------EHLVVENEGEEKKADIPESKMERESSPQTLIVAW 385 F+ +D +ED I Y + +G I L + S + C P+P + LS C + F+ Y+P+ LL+ ++L +EK + ++ K+ +FY +V+ESL SED+ + S E I +EI + K S Y + L EIL +++ Y G++G+ G D N++ F+C +FF+ + VL+ ++ +CS+ IW L R +S L + LK +K R + Y DF L +LLA + G+ LRV L+L E + ++W P +I + +RNSV E + E + IP + + E++ W Sbjct: 21 FKHTFDVLEDYISYVLITVGTIFLSVRLLSTLGTGELNCVILGVENGTLGGIDPYPSG----GTLGLLSYASNDEECIRTVYSKFMEYMPYILLIQTLILVIVEKFSFKIPRIAQKVERFYKNIVEESLFGKDPDVSEDLTDPKTSTEVISRRXQRNEICVSLKRSKIIGRVYVAKNLCEILLDIAFLSINIVYLLSTNDDLPRTCSVLIQGVDGINGPVETDHNIF---FQCRGKKMKFFVIGMYVQIVLLALHGICSLGAIIWSLGFR--SVSNLLRKISE------DDLKIQKKKRYRGGSNEFYAYRNGNDFLFLFDLLAHTCGIESTLRVLTHSDDNFYETCRPKIDTLTDLTLEEDKLKIVWRPADIEKLFRRNSVINIESYEVTIYPAETVQNTCTIPANTYDSETNDDVFYSIW 427
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1325315293|ref|XP_023339347.1| (uncharacterized protein LOC111709704 isoform X2 [Eurytemora affinis]) HSP 1 Score: 276.174 bits (705), Expect = 2.300e-84 Identity = 180/489 (36.81%), Postives = 258/489 (52.76%), Query Frame = 0 Query: 17 MAAIAGELSKQIKGHSEGAQGFRPWWDTVEDNIMYAFVILGMITLPMTFFSKTPIECTPHPRDWENVT-EIKGLSRF---YPKVYCTEMMIEPFLLYLPFTLLMVPIVLTAIEKTFVVLYKVEDKMNQFYLLLVKESLASEDVANLSKENIKDCHEIVQAFKTSNACYTSYFYRTLMEILGSSGLIAMFSYYNGINGLGVRFFDCNVYGHLFECLVPNSQFFMYVYVMAFVLIGVYLLCSVYNFIWILSARVGVLSKFLDGCHRQTDSYTEHLKDIQKPIVRLKLYFKPKAEDFSLLMNLLAESQGLPDALRVLSLFEHQFSMLWEPTNIRLIQKRNSVEHLVVENEGEEKKADIPESKMERESSPQTLIVAWDDANIAEYFFQCFKKKYTLEYSVEISPETEVPIKSILYYKDSSWMKCEELELLAH----DSLQEKTPMNIPR-------------KYSLSFDGLEAGQTYK-----LTFSTEVDGR 479 MAA+AG+LS+ I G S+ A+ FRPWWD +ED +MY+FV++ ++TLPMTF S P++C H + W N T ++ +R+ Y K YCTE I FLLYLPF+LL+ PI LTA+EK F+ + E K++QFY LLVKESL +E+V +L+ ENIK+ HEI QAF+ S+ CY SY YR FF + +A + + Y C+ +N W+L R+ L L GC R+ + + + RL++YF K+ DFSLLM+LLAES G+ +LR+L LF+ QF +W+PT+I+++++ + + G+EK I V+W D + A+Y + K LEY+VEI PETE IKS YY+ S + ++ LL + D + KT + KYS FDGL Q K L ST +DG+ Sbjct: 1 MAALAGDLSRVILGQSDAAKAFRPWWDYLEDYLMYSFVLMSLVTLPMTFLSGNPVDCAIHSQYWYNDTGKVPQYTRYIQAYSKKYCTETNISVFLLYLPFSLLLAPIFLTAVEKLFIRCFNCEKKLDQFYSLLVKESLCTEEVGHLANENIKELHEIKQAFRNSSGCYKSYLYR----------------------------------------------FFFLTFWLAVLSLFGYAGCTAFNLAWLLCPRMNKLRCLLLGCKRRKQTLSSNNGSSSLYQTRLEMYFDKKSRDFSLLMDLLAESSGIVQSLRILCLFDRQFQKMWDPTSIQILEQTDYL------GSGDEKTTSIN--------------VSWSDCHFADYAKKKLGNK-VLEYTVEIQPETEASIKSFHYYRLESLVG--QIGLLQNPLEDDHIDIKTGFQNGKHTNGMDKHTERFQKYSTRFDGLVVTQDEKYSLKVLKSSTLLDGK 420
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1325315285|ref|XP_023339343.1| (uncharacterized protein LOC111709704 isoform X1 [Eurytemora affinis] >gi|1325315287|ref|XP_023339344.1| uncharacterized protein LOC111709704 isoform X1 [Eurytemora affinis] >gi|1325315289|ref|XP_023339345.1| uncharacterized protein LOC111709704 isoform X1 [Eurytemora affinis] >gi|1325315291|ref|XP_023339346.1| uncharacterized protein LOC111709704 isoform X1 [Eurytemora affinis]) HSP 1 Score: 268.47 bits (685), Expect = 3.015e-81 Identity = 182/504 (36.11%), Postives = 260/504 (51.59%), Query Frame = 0 Query: 17 MAAIAGELSKQIKGHSEGAQGFRPWWDTVEDNIMYAFVILGMITLPMTFFSKTPIECTPHPRDWENVT-EIKGLSRF---YPKVYCTEMMIEPFLLYLPFTLLMVPIVLTAIEKTFVVLYKVEDKMNQFYLLLVKESLASEDVANLSKENIKDCHEIVQAFKTSNACYTSYFYRTLMEILGSSGLIAMFSYYNGINGLGVRFFDCNVYGHLFECLVPNSQFFMYVYVMAFVLIGVYLLCSVYNFIWILSARVGVLSKFLDGCHRQTDS----------YTEHLKDIQKPIV-----RLKLYFKPKAEDFSLLMNLLAESQGLPDALRVLSLFEHQFSMLWEPTNIRLIQKRNSVEHLVVENEGEEKKADIPESKMERESSPQTLIVAWDDANIAEYFFQCFKKKYTLEYSVEISPETEVPIKSILYYKDSSWMKCEELELLAH----DSLQEKTPMNIPR-------------KYSLSFDGLEAGQTYK-----LTFSTEVDGR 479 MAA+AG+LS+ I G S+ A+ FRPWWD +ED +MY+FV++ ++TLPMTF S P++C H + W N T ++ +R+ Y K YCTE I FLLYLPF+LL+ PI LTA+EK F+ + E K++QFY LLVKESL +E+V +L+ ENIK+ HEI QAF+ S+ CY SY YR FF + +A + + Y C+ +N W+L R+ L L GC R+ + Y + + V RL++YF K+ DFSLLM+LLAES G+ +LR+L LF+ QF +W+PT+I+++++ + + G+EK I V+W D + A+Y + K LEY+VEI PETE IKS YY+ S + ++ LL + D + KT + KYS FDGL Q K L ST +DG+ Sbjct: 1 MAALAGDLSRVILGQSDAAKAFRPWWDYLEDYLMYSFVLMSLVTLPMTFLSGNPVDCAIHSQYWYNDTGKVPQYTRYIQAYSKKYCTETNISVFLLYLPFSLLLAPIFLTAVEKLFIRCFNCEKKLDQFYSLLVKESLCTEEVGHLANENIKELHEIKQAFRNSSGCYKSYLYR----------------------------------------------FFFLTFWLAVLSLFGYAGCTAFNLAWLLCPRMNKLRCLLLGCKRRKQTLSSNNGSSSLYQTRYSIVGEESVPVLSDRLEMYFDKKSRDFSLLMDLLAESSGIVQSLRILCLFDRQFQKMWDPTSIQILEQTDYL------GSGDEKTTSIN--------------VSWSDCHFADYAKKKLGNK-VLEYTVEIQPETEASIKSFHYYRLESLVG--QIGLLQNPLEDDHIDIKTGFQNGKHTNGMDKHTERFQKYSTRFDGLVVTQDEKYSLKVLKSSTLLDGK 435
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1325335226|ref|XP_023349439.1| (uncharacterized protein LOC111718156 [Eurytemora affinis]) HSP 1 Score: 94.7449 bits (234), Expect = 1.632e-17 Identity = 92/378 (24.34%), Postives = 165/378 (43.65%), Query Frame = 0 Query: 17 MAAIAGELSKQIKGHSEGAQGFRPWWDTVEDNIMYAFVILGMITLPMTFFSKTPIECTPHPRDWENVTEIKGLSRFYPKVYCTE-------------MMIEPFLLYLPFTLLMVPIVLTAIEKTFVVLYKVEDKMNQFYLLLVKESLASEDVANLSKENIKDCHEIVQAFKTSNACYTSYFYRTLMEILGSSGLIAMFSYYNGIN-GLGVRFFDCNVYGHLFECLVPNSQFFMYVYVMAFVLIGVYLLCSVYNFIWILSARVGVLSKFLDGCHRQTDSYTEHLKDIQKPIVRLKLYFKPKAEDFSLLMNLLAESQGLPDALRVLSLFEHQFSMLWEPTNIRLIQKRNSVEHLVVENEGEEKKADIPESKMERESSPQT 380 MA ++ L I S + FRPWWD +ED+I+Y VIL ++ P +F S I+CT D + T G S ++ YC + + I F Y P+ LL++ L I++ FV++ + Q Y LLV ++ NL ++ K+ +E++ + ++ +TSY RTL I+ S + ++ +Y + + C + C + V + L+ +YL+ +++N IW+L + + K + K + K+YFK + + LLM LL+ + G+ +LR + L + + P SV+ V EK++ +P + + + P T Sbjct: 1 MALLSSTLLGGIN-LSTAEKAFRPWWDNIEDHIVYTLVILSILVAPNSFISPVRIDCT-CTSDCDKAT---GTSLYFIGQYCAQNVVGLDEYYWMDGLQISIFAAYFPYFLLLLSAALVIIDRPFVMILFQSYNIEQIYSLLVTHDPFTD---NLDRK--KETNELLSCLGSISSYFTSYLIRTLFSIVFSLIPLIIYIWYLVEDYSFDQDYHKCRFNIAEYSCAGYPMGLYKGVGYLYVSLLSIYLILNLWNLIWVLFPSINSIDKIM-----------IKFKAMHVSSNLDKIYFKNR--NVKLLMGLLSSTSGVGYSLRSMGLMDKSMNDALVP----------SVQMYPV----SEKQSYVPSTVLRFQIVPNT 341
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1325257064|ref|XP_023323105.1| (uncharacterized protein LOC111697352 [Eurytemora affinis]) HSP 1 Score: 87.4261 bits (215), Expect = 5.596e-16 Identity = 54/171 (31.58%), Postives = 92/171 (53.80%), Query Frame = 0 Query: 12 AKLSVMAAIAGELSKQIKGHSEGAQGFRPWWDTVEDNIMYAFVILGMITLPMTFFSKTPIECTPHPR-----DWENVTEIKGLSRFYPKVYCTEMMIEPFLLYLPFTLLMVPIVLTAIEKTFVVLYKVEDKMNQFYLLL---VKESLASEDVANLSKENIKDCHEIVQAFK 174 +K M ++ + + GHS+ + FRPWWD++ED ++Y ++LG+I P T F+ TP+ CT + D + + G ++ K YCT + F LY P+ LL+ + L AIE+ F ++K ++ FY LL V ++ S D+ + N++ EI ++FK Sbjct: 52 SKEKNMTSLGNAMMGTLLGHSDAEKMFRPWWDSLEDFVIYGLIMLGLIVSPTTIFNGTPLFCTQCTKPGQCGDNPSSVDDPGYYPYWVKSYCTMTSLTIFTLYFPYILLLSALALAAIERLFSRMFKTNIQIEGFYSLLKAEVSSNIESNDITVELENNVRTV-EIRESFK 221
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1325277243|ref|XP_023323261.1| (uncharacterized protein LOC111697470 [Eurytemora affinis]) HSP 1 Score: 82.8037 bits (203), Expect = 4.607e-13 Identity = 62/251 (24.70%), Postives = 127/251 (50.60%), Query Frame = 0 Query: 106 FLLYLPFTLLMVPIVLTAIEKTFVVLYKVEDKMNQFYLLLVKESLASE-DVANL-SKENIKDCHEIVQAFKTSNACYTSYFYRTLMEILGSSGLIAMFSYYNGINGLGVR-----FFDCNVYGHLFECLVPNSQFFMYVYVMAFVLIGVYLLCSVYNFIWILSARV-----GV-----LSKFLDGCHRQTDSYTEHLKDIQKPIVRLKLYFKPKAEDFSLLMNLLAESQGLPDALRVLSLFEHQFSMLWEP 339 +LYLP+ + + + + +E+ + ++ +FY LLVK+S+ + + L ++EN C +I+ F+ SN Y +Y +TL ++L ++ ++A ++ + L VR F+ + G++ +C +P + ++ + L+ + L+ S +W + + G+ LS+ L+ C + + + I YFK + D LL+N+L E++GL +LR+LSLF+ F +++P Sbjct: 53 LVLYLPYLIFGLALSMILLERLLTRFFWTGQRIEKFYNLLVKQSIKEGVNCSTLYTRENRLACQQILYDFRDSNIHYRAYMCQTLGKLLIAAAVVA----WSFASPLRVRQSFKSNFNSRMQGYMHQCTIPANDLNEIIFELVNGLMMLILISSFGTLVWYVRIYMPDHCYGMVANTKLSRLLNKCQQDMKPFPSTINSI---------YFK--STDMRLLLNILTETKGLWASLRILSLFDSSFRQIFKP 288
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1325307664|ref|XP_023335450.1| (uncharacterized protein LOC111706757 isoform X1 [Eurytemora affinis] >gi|1325307666|ref|XP_023335451.1| uncharacterized protein LOC111706757 isoform X1 [Eurytemora affinis] >gi|1325307668|ref|XP_023335452.1| uncharacterized protein LOC111706757 isoform X1 [Eurytemora affinis]) HSP 1 Score: 78.9518 bits (193), Expect = 1.001e-11 Identity = 84/345 (24.35%), Postives = 140/345 (40.58%), Query Frame = 0 Query: 38 FRPWWDTVEDNIMYAFVILGMITLPMTFFS---KTPIEC---------------TPHPRDWENVTEIKGLSRFYPKVYCTEMMIEPFLLYLPFTLLMVPIVLTAIEKTFVVLYKVEDKMNQFYLLLVKESL------ASEDVAN--LSKENI---KDCHEIVQAFKTSNACYTSYFYRTLMEILGSSGLIAMFSYYNGINGL-----GVRFFDCNVYGHL--------FECLVPNSQFFMYVYVMAFVLIGVYLLCSVYNFIWILSARVGVLSKFLDGCHRQTDSYTEHLKDIQKPIVRLKLYFKPK-AEDFSLLMNLLAESQGLPDALRVLSLFEHQFSMLWEP 339 F+ D +ED + Y + +G I L + S + C P+P + T + + F C + + F+ LP+ LLM +++ IEK L ++ K+ +FYL +V++SL +EDV + +KE I + +E+ + K SN + +Y + +ME L I + Y+ I+ L + D L F+C FF+ + + L + L+CS + IW L R T L+DIQ+ K DF L +LLA + G+ LRVL+ +H F + +P Sbjct: 34 FKHTLDVIEDYVCYGLIAVGTIALSVRLLSTLGSGDVNCMVLGVRNGSSPDHELGPYPSG--SATPLVAYANF--NRACVDESMTQFMQSLPYILLMQALLIILIEKFLTKLPRISGKVERFYLTIVEDSLNGRNSDVAEDVCDEKANKEAISRKRQRNEVCNSLKRSNTLFFTYVMKNVMEQLLLWAFIPINIYF-AIDSLPNLESSICIIDVGADMGLGLPGGQAHFQCDGKKVSFFIILLYFSVALQVICLVCSTGSLIWCLFFR----------------DITNLLRDIQEVSSAEDFILIAKEGRDFIFLFDLLAHTSGIESTLRVLTHADHTFQQICQP 357
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1325307670|ref|XP_023335453.1| (uncharacterized protein LOC111706757 isoform X2 [Eurytemora affinis] >gi|1325307672|ref|XP_023335454.1| uncharacterized protein LOC111706757 isoform X2 [Eurytemora affinis]) HSP 1 Score: 78.5666 bits (192), Expect = 1.135e-11 Identity = 84/345 (24.35%), Postives = 140/345 (40.58%), Query Frame = 0 Query: 38 FRPWWDTVEDNIMYAFVILGMITLPMTFFS---KTPIEC---------------TPHPRDWENVTEIKGLSRFYPKVYCTEMMIEPFLLYLPFTLLMVPIVLTAIEKTFVVLYKVEDKMNQFYLLLVKESL------ASEDVAN--LSKENI---KDCHEIVQAFKTSNACYTSYFYRTLMEILGSSGLIAMFSYYNGINGL-----GVRFFDCNVYGHL--------FECLVPNSQFFMYVYVMAFVLIGVYLLCSVYNFIWILSARVGVLSKFLDGCHRQTDSYTEHLKDIQKPIVRLKLYFKPK-AEDFSLLMNLLAESQGLPDALRVLSLFEHQFSMLWEP 339 F+ D +ED + Y + +G I L + S + C P+P + T + + F C + + F+ LP+ LLM +++ IEK L ++ K+ +FYL +V++SL +EDV + +KE I + +E+ + K SN + +Y + +ME L I + Y+ I+ L + D L F+C FF+ + + L + L+CS + IW L R T L+DIQ+ K DF L +LLA + G+ LRVL+ +H F + +P Sbjct: 22 FKHTLDVIEDYVCYGLIAVGTIALSVRLLSTLGSGDVNCMVLGVRNGSSPDHELGPYPSG--SATPLVAYANF--NRACVDESMTQFMQSLPYILLMQALLIILIEKFLTKLPRISGKVERFYLTIVEDSLNGRNSDVAEDVCDEKANKEAISRKRQRNEVCNSLKRSNTLFFTYVMKNVMEQLLLWAFIPINIYF-AIDSLPNLESSICIIDVGADMGLGLPGGQAHFQCDGKKVSFFIILLYFSVALQVICLVCSTGSLIWCLFFR----------------DITNLLRDIQEVSSAEDFILIAKEGRDFIFLFDLLAHTSGIESTLRVLTHADHTFQQICQP 345
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1325305673|ref|XP_023334450.1| (uncharacterized protein LOC111705966 isoform X3 [Eurytemora affinis]) HSP 1 Score: 75.485 bits (184), Expect = 1.037e-10 Identity = 97/421 (23.04%), Postives = 175/421 (41.57%), Query Frame = 0 Query: 98 CTEMMIEPFLLYLPFTLLMVPIVLTAIEKTFVVLYKVEDKMNQFYLLLVKESL----------ASEDVAN---LSKENIKDCHEIVQAFKTSNACYTSYFYRTLMEILGSSGLIAMFSYYN-----------------GINGLGVRFFDCNVYGHLFECLVPNSQFFMYVYVMAFVLIGVYLLCSVYNFIWILSARVGVLSKFLDGCHRQTDSYTEHLKDIQKPIVRLKLYFKPKAEDFSLLMNLLAESQGLPDALRVLSLFEHQFSMLWEPTNIRLIQKRNSVEHLVVENEGEEKKADIPESKMERESSPQTLIVAWDDANIAEYFFQCFKKKYTLE-YSVEISPETEVPIKSILYYKDSSWMKCEELELLAHDSLQEKTPMNIPRKYSLSFDGLEAGQTYKLTFSTEVDGRTVAQMIRL 487 C + ++ + P+ +++ +++ +EK F+ + +V ++ +FY +V+ESL S+D AN +S++ ++ E+ + KTSN SY + +MEI + +I Y+ + LG F + +VY F+C+ QFF+ + ++ + S+ + IW L R +S+ L+ + + KDI+ P++ DF LM+LLA S GL LRVL+ + F + P RL +H++ E +L + W A I E+ + + ++ Y V I P IK+ + K + +K ELL +I Y+ F LE G+T + V GR+ + R+ Sbjct: 63 CVNSSVTLYMQWAPYIIIIETLLMIMVEKMFLKMPRVAGRIERFYNNIVEESLFGKDPDVAEDVSDDKANTEAISRKRRRN--EVCMSLKTSNVISQSYVLKNIMEICMLAIIIPFNIYFTIEAEVNLNPNVCKLEILHLPDLG--FANGSVY---FQCMGKKIQFFLTIILVQVAFQTAVIFTSLGSLIWCLFGR--SISRMLNKIQQDVN-----FKDIE-PVI---------GSDFIFLMDLLAHSSGLESTLRVLTHSDETFRRICLP---RLTF---DADHIMAEE--------------------TSLTITWSAAKIEEWLVEHSHRGIMVDCYDVTIFPAES--IKNTVSKK--AKLKKARQELL-----------DIDNNYTACFTDLEGGRTEYIVTIACVIGRSRMKGERI 418
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1325305671|ref|XP_023334449.1| (uncharacterized protein LOC111705966 isoform X2 [Eurytemora affinis]) HSP 1 Score: 75.0998 bits (183), Expect = 1.299e-10 Identity = 96/414 (23.19%), Postives = 172/414 (41.55%), Query Frame = 0 Query: 98 CTEMMIEPFLLYLPFTLLMVPIVLTAIEKTFVVLYKVEDKMNQFYLLLVKESL----------ASEDVAN---LSKENIKDCHEIVQAFKTSNACYTSYFYRTLMEILGSSGLIAMFSYYN-----------------GINGLGVRFFDCNVYGHLFECLVPNSQFFMYVYVMAFVLIGVYLLCSVYNFIWILSARVGVLSKFLDGCHRQTDSYTEHLKDIQKPIVRLKLYFKPKAEDFSLLMNLLAESQGLPDALRVLSLFEHQFSMLWEPTNIRLIQKRNSVEHLVVENEGEEKKADIPESKMERESSPQTLIVAWDDANIAEYFFQCFKKKYTLE-YSVEISPETEVPIKSILYYKDSSWMKCEELELLAHDSLQEKTPMNIPRKYSLSFDGLEAGQTYKLTFSTEVDGRT 480 C + ++ + P+ +++ +++ +EK F+ + +V ++ +FY +V+ESL S+D AN +S++ ++ E+ + KTSN SY + +MEI + +I Y+ + LG F + +VY F+C+ QFF+ + ++ + S+ + IW L R +S+ L+ + + KDI+ P++ DF LM+LLA S GL LRVL+ + F + P RL +H++ E +L + W A I E+ + + ++ Y V I P IK+ + K + +K ELL +I Y+ F LE G+T + V GR+ Sbjct: 63 CVNSSVTLYMQWAPYIIIIETLLMIMVEKMFLKMPRVAGRIERFYNNIVEESLFGKDPDVAEDVSDDKANTEAISRKRRRN--EVCMSLKTSNVISQSYVLKNIMEICMLAIIIPFNIYFTIEAEVNLNPNVCKLEILHLPDLG--FANGSVY---FQCMGKKIQFFLTIILVQVAFQTAVIFTSLGSLIWCLFGR--SISRMLNKIQQDVN-----FKDIE-PVI---------GSDFIFLMDLLAHSSGLESTLRVLTHSDETFRRICLP---RLTF---DADHIMAEE--------------------TSLTITWSAAKIEEWLVEHSHRGIMVDCYDVTIFPAES--IKNTVSKK--AKLKKARQELL-----------DIDNNYTACFTDLEGGRTEYIVTIACVIGRS 411
BLAST of abc transporter atp-binding protein vs. nr
Match: gi|1325305669|ref|XP_023334448.1| (uncharacterized protein LOC111705966 isoform X1 [Eurytemora affinis]) HSP 1 Score: 71.633 bits (174), Expect = 1.827e-9 Identity = 96/421 (22.80%), Postives = 173/421 (41.09%), Query Frame = 0 Query: 98 CTEMMIEPFLLYLPFTLLMVPIVLTAIEKTFVVLYKVEDKMNQFYLLLVKESL----------ASEDVAN---LSKENIKDCHEIVQAFKTSNACYTSYFYRTLMEILGSSGLIAMFSYYN-----------------GINGLGVRFFDCNVYGHLFECLVPNSQFFMYVYVMAFVLIGVYLLCSVYNFIWILSARVGVLSKFLDGCHRQTDSYTEHLKDIQKPIVRLKLYFKPKAEDFSLLMNLLAESQGLPDALRVLSLFEHQFSMLWEPTNIRLIQKRNSVEHLVVENEGEEKKADIPESKMERESSPQTLIVAWDDANIAEYFFQCFKKKYTLE-YSVEISPETEVPIKSILYYKDSSWMKCEELELLAHDSLQEKTPMNIPRKYSLSFDGLEAGQTYKLTFSTEVDGRTVAQMIRL 487 C + ++ + P+ +++ +++ +EK F+ + +V ++ +FY +V+ESL S+D AN +S++ ++ E+ + KTSN SY + +MEI + +I Y+ + LG F + +VY F+C+ QFF+ + ++ + S+ + IW L R +S+ L+ + DI+ P++ DF LM+LLA S GL LRVL+ + F + P RL +H++ E +L + W A I E+ + + ++ Y V I P IK+ + K + +K ELL +I Y+ F LE G+T + V GR+ + R+ Sbjct: 63 CVNSSVTLYMQWAPYIIIIETLLMIMVEKMFLKMPRVAGRIERFYNNIVEESLFGKDPDVAEDVSDDKANTEAISRKRRRN--EVCMSLKTSNVISQSYVLKNIMEICMLAIIIPFNIYFTIEAEVNLNPNVCKLEILHLPDLG--FANGSVY---FQCMGKKIQFFLTIILVQVAFQTAVIFTSLGSLIWCLFGR--SISRMLNKIQQD---------DIE-PVI---------GSDFIFLMDLLAHSSGLESTLRVLTHSDETFRRICLP---RLTF---DADHIMAEE--------------------TSLTITWSAAKIEEWLVEHSHRGIMVDCYDVTIFPAES--IKNTVSKK--AKLKKARQELL-----------DIDNNYTACFTDLEGGRTEYIVTIACVIGRSRMKGERI 414 The following BLAST results are available for this feature:
BLAST of abc transporter atp-binding protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 6
BLAST of abc transporter atp-binding protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of abc transporter atp-binding protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold103_size370364:43914..57243- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold103_size370364-snap-gene-0.20 ID=maker-scaffold103_size370364-snap-gene-0.20|Name=abc transporter atp-binding protein|organism=Tigriopus kingsejongensis|type=gene|length=13330bp|location=Sequence derived from alignment at scaffold103_size370364:43914..57243- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'abc transporter atp-binding protein' has the following synonyms
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