nadh dehydrogenase subunit 1, maker-scaffold1053_size66761-snap-gene-0.11 (gene) Tigriopus kingsejongensis

Overview
Namenadh dehydrogenase subunit 1
Unique Namemaker-scaffold1053_size66761-snap-gene-0.11
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|7994638|sp|O78701.1|NU1M_BRAVA (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1)

HSP 1 Score: 117.472 bits (293), Expect = 1.963e-31
Identity = 62/128 (48.44%), Postives = 86/128 (67.19%), Query Frame = 0
Query:    1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLFF-------FPALET 121
            ++GALR +AQTISYE++L++++LS+     +F+L+ L+    +  +   T PL  +W +S +AETNRTPFD +EGESELVSGFNVEY    FAL +MAEY  I+  + LT +LFF       FP L T
Sbjct:  129 LIGALRAVAQTISYEVTLAIILLSIMLINGSFTLSTLTITQEQMWLILPTWPLAMMWFISTLAETNRTPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTATLFFGAFHNPLFPELHT 256          
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|3122452|sp|Q37603.1|NU1M_PETMA (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1)

HSP 1 Score: 117.472 bits (293), Expect = 2.214e-31
Identity = 69/163 (42.33%), Postives = 92/163 (56.44%), Query Frame = 0
Query:    1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLFFFPALETFWTFMPAVVLVQLAIPSLMLLYLTEDLAPS-------HLIYK 156
            ++GALR +AQTISYE+SL L++L L     +FSL               + PL A+W VS +AETNRTPFD  EGESELVSGFNVEY G  FAL ++AEY  IL+ + LT  +F  P        +P + ++  A P ++L        P        HL++K
Sbjct:  131 LIGALRAVAQTISYEVSLGLILLCLVILTGSFSLQAFIYTQEHTWFLLSSWPLAAMWFVSTLAETNRTPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILFMNTLTAIMFLGPLGSNNLNILPIINIMMKATPLIILFLWIRASYPRFRYDQLMHLMWK 293          
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|462750|sp|P33502.1|NU1M_ANOQU (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1)

HSP 1 Score: 117.087 bits (292), Expect = 3.362e-31
Identity = 59/114 (51.75%), Postives = 79/114 (69.30%), Query Frame = 0
Query:    1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114
            ++G LR +AQTISYE+SL+L++LS  F +  ++  +   + +         PL  +WL SC+AETNRTPFDFAEGESELVSGFNVEY    FALI++AEY  IL+ S+L   +F
Sbjct:  134 LLGGLRAVAQTISYEVSLALILLSFIFLIGNYNFLNFYSYQSYIWFIFFCFPLGLVWLASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVVIF 247          
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|61214378|sp|Q8M893.1|NU1M_EMBAL (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1 (mitochondrion) [Emballonura alecto])

HSP 1 Score: 117.087 bits (292), Expect = 3.514e-31
Identity = 61/128 (47.66%), Postives = 85/128 (66.41%), Query Frame = 0
Query:    1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLFF----FPALETFWT 124
            ++GALR +AQTISYE++L++++LS+     +FSL +LS       +     PL  +W +S +AETNR PFD  EGESELVSGFNVEY G  FAL ++AEY  I+  + +TT+LF      P+L  F+T
Sbjct:  129 LIGALRAVAQTISYEVTLAIILLSVLLMSGSFSLPNLSTTQENLWLIIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGSFALFFLAEYANIIMMNAITTTLFLGLYQNPSLPEFYT 256          
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|13631511|sp|O48358.1|NU1M_THYAR (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1)

HSP 1 Score: 116.316 bits (290), Expect = 7.808e-31
Identity = 64/119 (53.78%), Postives = 83/119 (69.75%), Query Frame = 0
Query:    1 MVGALRGIAQTISYEISLSLLILSL-----AFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114
            ++GALR +AQTISYE+SL L++LS+      F+++TF++A  S  L   P +    PL ALW +S +AETNR PFDF EGESELVSGFNVEY G  FAL ++AEY  IL  + L+  LF
Sbjct:  135 LIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNIAQESIWLV-VPAW----PLAALWYISTLAETNRAPFDFTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILF 248          
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|11133876|sp|O47479.1|NU1M_HETBL (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1)

HSP 1 Score: 115.546 bits (288), Expect = 1.239e-30
Identity = 57/113 (50.44%), Postives = 83/113 (73.45%), Query Frame = 0
Query:    1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSL 113
            ++G++R +AQ+ISYE+S+SL+++S    V + SL+ +  +     +  +   ++ +W VSC+AET+R PFDFAEGESELVSGFN EYGG  FAL++MAEYG IL+ S+L  SL
Sbjct:  132 LLGSVRAVAQSISYEVSMSLILMSCLLLVGSMSLSMIMKYQFFVWVAFVNFFMMLMWFVSCVAETHRAPFDFAEGESELVSGFNTEYGGVGFALLFMAEYGNILFMSVLVISL 244          
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|6093544|sp|O47868.1|NU1M_ALLMI (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1)

HSP 1 Score: 115.546 bits (288), Expect = 1.349e-30
Identity = 67/143 (46.85%), Postives = 96/143 (67.13%), Query Frame = 0
Query:    1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIY-AL-TAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLFFFPALETFWTFMPAVVLVQLAIPSLML 141
            ++GA+R +AQTISYE++L++++LS+      FSL  L+  + + P+Y AL T P + +W  S +AETNR PFD  EGESELVSGFNVEY    FAL ++AEY  I+  + LTT+LF  P+     TF+PA+  + L   +L+L
Sbjct:  132 LMGAMRAVAQTISYEVTLAIIVLSIVLLSGGFSLHTLT--VTQEPLYLALATWPSMMMWYTSTLAETNRAPFDLTEGESELVSGFNVEYSASPFALFFLAEYANIMLMNTLTTTLFLSPSTP---TFLPALFTIALMSKALLL 269          
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|205829246|sp|B0FWD8.1|NU1M_AEDAE (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1)

HSP 1 Score: 115.161 bits (287), Expect = 1.422e-30
Identity = 58/114 (50.88%), Postives = 78/114 (68.42%), Query Frame = 0
Query:    1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114
            ++G LR +AQTISYE+SL+L++LS  F +  ++  +   +           PL  +W  SC+AETNRTPFDFAEGESELVSGFNVEY    FALI++AEY  IL+ S+L + +F
Sbjct:  133 LLGGLRAVAQTISYEVSLALILLSFIFLIGNYNFLNFFMYQKYMWFIVFCFPLGLVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFSVIF 246          
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|2499233|sp|Q96182.1|NU1M_POLOR (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1)

HSP 1 Score: 115.161 bits (287), Expect = 1.676e-30
Identity = 64/126 (50.79%), Postives = 84/126 (66.67%), Query Frame = 0
Query:    1 MVGALRGIAQTISYEISLSLLILSL-----AFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLFFFPALET 121
            ++GALR +AQTISYE++L L+I+SL      F++ TF+ A  +  L   P +    PL A+W +S +AETNR PFD  EGESELVSGFNVEY G  FAL ++AEY  IL  + L+T LF  P+  T
Sbjct:  133 LIGALRAVAQTISYEVTLGLIIISLIMFTGGFTLTTFNTAQEAVWLI-LPAW----PLAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILLMNALSTILFLGPSFNT 253          
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|462749|sp|P34846.1|NU1M_ANOGA (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1)

HSP 1 Score: 114.39 bits (285), Expect = 2.911e-30
Identity = 60/114 (52.63%), Postives = 77/114 (67.54%), Query Frame = 0
Query:    1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114
            ++G LR +AQTISYE+SL+L++LS  F V  ++      +           PL  +WL SC+AETNRTPFDFAEGESELVSGFNVEY    FALI++AEY  IL+ S+L   +F
Sbjct:  134 LLGGLRAVAQTISYEVSLALILLSFIFLVGNYNFLSFYFYQDYVWFIFFCFPLGLVWLASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVVIF 247          
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|61200932|gb|AAX39834.1| (NADH dehydrogenase subunit 1 (mitochondrion) [Tigriopus japonicus])

HSP 1 Score: 145.591 bits (366), Expect = 8.548e-40
Identity = 72/115 (62.61%), Postives = 92/115 (80.00%), Query Frame = 0
Query:    1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLFF 115
            ++G+LRGIAQ+ISYEISLSL++LSL   V++FSL   S +L    +     PL+ LWLVSC+AETNRTPFDFAEGESELVSG NVE+G   F L++M+EYG+IL+FS+LT+ LFF
Sbjct:  131 IIGSLRGIAQSISYEISLSLIVLSLMLLVQSFSLEAWSLYLPSSGLSVFLIPLLILWLVSCLAETNRTPFDFAEGESELVSGVNVEFGSVFFVLMFMSEYGMILFFSVLTSGLFF 245          
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|118213851|gb|ABK79911.1| (NADH dehydrogenase subunit 1 (mitochondrion) [Tigriopus californicus])

HSP 1 Score: 144.05 bits (362), Expect = 2.972e-39
Identity = 70/114 (61.40%), Postives = 92/114 (80.70%), Query Frame = 0
Query:    1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114
            ++G+LRGIAQ+ISYEISLSL+ LSL    ++FS++    +L    +    APL+ LWLVSC+AETNRTPFDFAEGESELVSGFNVE+GG  F  ++M+EYG+IL+FS+LT++LF
Sbjct:  131 LLGSLRGIAQSISYEISLSLIFLSLMLLCQSFSVSGFEYYLPSGCLTLFLAPLMLLWLVSCLAETNRTPFDFAEGESELVSGFNVEFGGLNFVFMFMSEYGMILFFSVLTSNLF 244          
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|118213866|gb|ABK79924.1| (NADH dehydrogenase subunit 1 (mitochondrion) [Tigriopus californicus])

HSP 1 Score: 141.739 bits (356), Expect = 2.684e-38
Identity = 68/114 (59.65%), Postives = 91/114 (79.82%), Query Frame = 0
Query:    1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114
            ++G+LRGIAQ+ISYEISLSL+ LSL    +TFS++    +L    +     PL+ LWL+SC+AETNRTPFDFAEGESELVSGFNVE+GG  F  ++M+EYG+IL+FS+LT+++F
Sbjct:  131 LLGSLRGIAQSISYEISLSLIFLSLMLLSQTFSVSGFEHYLPSGFLSLFLGPLMLLWLISCLAETNRTPFDFAEGESELVSGFNVEFGGLNFVFMFMSEYGMILFFSLLTSNMF 244          
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|21327731|ref|NP_652748.1| (NADH dehydrogenase subunit 1 [Tigriopus japonicus] >gi|21320910|dbj|BAB97219.1| NADH dehydrogenase subunit 1 (mitochondrion) [Tigriopus japonicus])

HSP 1 Score: 140.969 bits (354), Expect = 4.492e-38
Identity = 67/114 (58.77%), Postives = 92/114 (80.70%), Query Frame = 0
Query:    1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114
            ++G+LRGIAQ+ISYEISLSL++LS+    ++FS+   +  L    +     PL++LWL+SC+AE+NRTPFDFAEGESELVSGFNVE+GG  F L++M+EYG+IL+FS+LT+ LF
Sbjct:  131 LIGSLRGIAQSISYEISLSLIVLSMMLLWQSFSIESAADFLPSPGLTVFLFPLLSLWLISCLAESNRTPFDFAEGESELVSGFNVEFGGIFFVLMFMSEYGMILFFSLLTSGLF 244          
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|124358965|ref|YP_001023778.1| (NADH dehydrogenase subunit 1 [Tigriopus californicus] >gi|113201762|gb|ABI33093.1| NADH dehydrogenase subunit 1 (mitochondrion) [Tigriopus californicus])

HSP 1 Score: 138.658 bits (348), Expect = 3.373e-37
Identity = 67/114 (58.77%), Postives = 90/114 (78.95%), Query Frame = 0
Query:    1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114
            ++G+LRGIAQ+ISYEISLSL+ LSL    +TFS++     L    +    +PL+ LWLVSC+AETNRTPFDF+EGESELVSGFNVE+GG  F  ++M+EYG+IL+FS+ T+++F
Sbjct:  131 LLGSLRGIAQSISYEISLSLIFLSLMLLSQTFSVSGFEHFLPSGCLTLFLSPLMLLWLVSCLAETNRTPFDFSEGESELVSGFNVEFGGLNFVFMFMSEYGMILFFSVWTSNMF 244          
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|77020135|ref|YP_337861.1| (NADH dehydrogenase subunit 1 [Lysiosquillina maculata] >gi|75214474|gb|ABA18073.1| NADH dehydrogenase subunit 1 (mitochondrion) [Lysiosquillina maculata])

HSP 1 Score: 133.65 bits (335), Expect = 4.670e-35
Identity = 67/114 (58.77%), Postives = 84/114 (73.68%), Query Frame = 0
Query:    1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114
            ++G++R +AQTISYE+SL+L++LS  F V  F+L   S +   C +  LT PL  +W VSC+AETNRTPFDFAEGESELVSGFNVEY G  FALI++AEY  IL+ S L   LF
Sbjct:  132 LLGSIRAVAQTISYEVSLALILLSFIFLVGGFNLGLFSDYQKECWLMVLTIPLAGVWFVSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYSSILFMSALFVILF 245          
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|1369124105|ref|YP_009471399.1| (NADH dehydrogenase subunit 1 (mitochondrion) [Clithon retropictum] >gi|1347479717|gb|AVG72790.1| NADH dehydrogenase subunit 1 (mitochondrion) [Clithon retropictum])

HSP 1 Score: 132.88 bits (333), Expect = 8.214e-35
Identity = 68/115 (59.13%), Postives = 86/115 (74.78%), Query Frame = 0
Query:    1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLFF 115
            ++GALR IAQTISYE+SL+L++L   F+  TF++ ++           L +P+  +WLVSCIAETNR PFDFAEGESELVSGFN+EYG   FALI+MAEY  IL+ S+LTT LFF
Sbjct:  131 LLGALRAIAQTISYEVSLALILLFSLFTSETFNVVEIKSFNELVWFVFLLSPIALVWLVSCIAETNRAPFDFAEGESELVSGFNIEYGSGGFALIFMAEYANILFMSLLTTVLFF 245          
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|1150084365|ref|YP_009349856.1| (NADH dehydrogenase subunit 1 (mitochondrion) [Conocephalus melaenus] >gi|1143273067|gb|AQM39992.1| NADH dehydrogenase subunit 1 (mitochondrion) [Conocephalus melaenus])

HSP 1 Score: 132.109 bits (331), Expect = 1.648e-34
Identity = 68/114 (59.65%), Postives = 84/114 (73.68%), Query Frame = 0
Query:    1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114
            M+GALR +AQTISYE+SL+L++LSL F V  + L D   +        L  PL+ +W  SC+AETNRTPFDFAEGESELVSGFNVEYGG  FALI++AEY  IL+ S+L + LF
Sbjct:  136 MLGALRAVAQTISYEVSLTLILLSLVFLVEGYCLLDFIKYQESIWFMFLAFPLMLIWFSSCLAETNRTPFDFAEGESELVSGFNVEYGGGGFALIFLAEYASILFMSMLFSVLF 249          
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|1050202008|gb|ANZ03427.1| (NADH dehydrogenase subunit 1 (mitochondrion) [Theodoxus fluviatilis])

HSP 1 Score: 132.109 bits (331), Expect = 1.681e-34
Identity = 70/115 (60.87%), Postives = 85/115 (73.91%), Query Frame = 0
Query:    1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLFF 115
            ++GALR IAQTISYE+SL+L++L   F   TFSL ++           L +P+  +WLVSCIAETNR PFDFAEGESELVSGFN+EYG   FALI+MAEY  IL+ S+LTT LFF
Sbjct:  131 LLGALRAIAQTISYEVSLALILLFSLFISETFSLTEIKLFNELIWFTFLLSPIALIWLVSCIAETNRAPFDFAEGESELVSGFNIEYGSGGFALIFMAEYANILFMSLLTTILFF 245          
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|594448812|ref|YP_009019489.1| (NADH dehydrogenase subunit 1 (mitochondrion) [Amphiascoides atopus] >gi|563407404|gb|AHB52772.1| NADH dehydrogenase subunit 1 (mitochondrion) [Amphiascoides atopus])

HSP 1 Score: 131.724 bits (330), Expect = 1.897e-34
Identity = 70/113 (61.95%), Postives = 85/113 (75.22%), Query Frame = 0
Query:    1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSL 113
            MVG LR +AQTISYE+SLSL+ LS    V + +   +S  L R P+  LTA +  LWL+S +AETNRTPFDFAEGESELVSGFNVEYGG  FALI+MAEY  IL+FS +++ L
Sbjct:  129 MVGGLRSVAQTISYEVSLSLIFLSYLVLVCSLNFTAMS-ELTRTPLVLLTAGIFILWLISGLAETNRTPFDFAEGESELVSGFNVEYGGGGFALIFMAEYSSILFFSAMSSLL 240          
The following BLAST results are available for this feature:
BLAST of nadh dehydrogenase subunit 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|7994638|sp|O78701.1|NU1M_BRAVA1.963e-3148.44RecName: Full=NADH-ubiquinone oxidoreductase chain... [more]
gi|3122452|sp|Q37603.1|NU1M_PETMA2.214e-3142.33RecName: Full=NADH-ubiquinone oxidoreductase chain... [more]
gi|462750|sp|P33502.1|NU1M_ANOQU3.362e-3151.75RecName: Full=NADH-ubiquinone oxidoreductase chain... [more]
gi|61214378|sp|Q8M893.1|NU1M_EMBAL3.514e-3147.66RecName: Full=NADH-ubiquinone oxidoreductase chain... [more]
gi|13631511|sp|O48358.1|NU1M_THYAR7.808e-3153.78RecName: Full=NADH-ubiquinone oxidoreductase chain... [more]
gi|11133876|sp|O47479.1|NU1M_HETBL1.239e-3050.44RecName: Full=NADH-ubiquinone oxidoreductase chain... [more]
gi|6093544|sp|O47868.1|NU1M_ALLMI1.349e-3046.85RecName: Full=NADH-ubiquinone oxidoreductase chain... [more]
gi|205829246|sp|B0FWD8.1|NU1M_AEDAE1.422e-3050.88RecName: Full=NADH-ubiquinone oxidoreductase chain... [more]
gi|2499233|sp|Q96182.1|NU1M_POLOR1.676e-3050.79RecName: Full=NADH-ubiquinone oxidoreductase chain... [more]
gi|462749|sp|P34846.1|NU1M_ANOGA2.911e-3052.63RecName: Full=NADH-ubiquinone oxidoreductase chain... [more]

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BLAST of nadh dehydrogenase subunit 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|61200932|gb|AAX39834.1|8.548e-4062.61NADH dehydrogenase subunit 1 (mitochondrion) [Tigr... [more]
gi|118213851|gb|ABK79911.1|2.972e-3961.40NADH dehydrogenase subunit 1 (mitochondrion) [Tigr... [more]
gi|118213866|gb|ABK79924.1|2.684e-3859.65NADH dehydrogenase subunit 1 (mitochondrion) [Tigr... [more]
gi|21327731|ref|NP_652748.1|4.492e-3858.77NADH dehydrogenase subunit 1 [Tigriopus japonicus]... [more]
gi|124358965|ref|YP_001023778.1|3.373e-3758.77NADH dehydrogenase subunit 1 [Tigriopus californic... [more]
gi|77020135|ref|YP_337861.1|4.670e-3558.77NADH dehydrogenase subunit 1 [Lysiosquillina macul... [more]
gi|1369124105|ref|YP_009471399.1|8.214e-3559.13NADH dehydrogenase subunit 1 (mitochondrion) [Clit... [more]
gi|1150084365|ref|YP_009349856.1|1.648e-3459.65NADH dehydrogenase subunit 1 (mitochondrion) [Cono... [more]
gi|1050202008|gb|ANZ03427.1|1.681e-3460.87NADH dehydrogenase subunit 1 (mitochondrion) [Theo... [more]
gi|594448812|ref|YP_009019489.1|1.897e-3461.95NADH dehydrogenase subunit 1 (mitochondrion) [Amph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1053_size66761supercontigscaffold1053_size66761:58803..59642 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:membrane
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1053_size66761-snap-gene-0.11-mRNA-1maker-scaffold1053_size66761-snap-gene-0.11-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1053_size66761:58803..59642+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1053_size66761-snap-gene-0.11 ID=maker-scaffold1053_size66761-snap-gene-0.11|Name=nadh dehydrogenase subunit 1|organism=Tigriopus kingsejongensis|type=gene|length=840bp|location=Sequence derived from alignment at scaffold1053_size66761:58803..59642+ (Tigriopus kingsejongensis)
ATGGTGGGCGCCCTGCGGGGGATTGCCCAGACTATCTCGTACGAAATTAG CCTAAGTTTACTAATCTTAAGTCTTGCTTTCTCAGTGAGGACATTTTCCC TCGCAGATCTCTCGGGGCACCTTGCCAGGTGCCCCATATACGCGCTGACG GCTCCTTTGGTGGCACTTTGGCTAGTTTCTTGCATCGCTGAAACTAACCG CACCCCCTTTGATTTTGCAGAAGGGGAATCCGAACTAGTCTCTGGGTTTA ATGTGGAATACGGAGGCTTTATGTTTGCTCTTATTTATATGGCAGAGTAC GGCATAATTTTGTATTTCTCTATTTTGACCACTTCTTTATTCTTTTTTCC GGTAGGGGGGGGGCCGCTATTTCCGGCAGTATTTATTCTCTTTGTCGCAG TCTGGATATGGCTGCGCGCCACATTTCCCCGATTTCGCTACGATAAATTA ATAAATCTAGCCTGAAAGGCTTTTTTGCCACTCGCCCTCATGTGGACCCC ATTTTTTTTGGCTATCTCTATCCTATAAATGATAACCTGATCTCAGCTAG GACTTCAAGACTCGGCATCTTCACTCATAGAAGAATTTATTTACTTTCAT GATTTCACTCTTCTTATTCTTGGGCTTAATTTGTCAGTAGTGGACCTAAT GCTATACTTCGCACTTCCCTCTAAGTGAGTCAATAAAAATCTTCTTGAGG GACAGGCGCTAGAAACTTTCTGGACCTTCATGCCCGCGGTTGTCTTAGTA CAACTGGCTATCCCCTCTTTGATGCTTCTCTACCTGACAGAAGACTTGGC GCCTTCCCACTTAATCTATAAGGTCATGGGACACCAGTGA
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Synonyms
The feature 'nadh dehydrogenase subunit 1' has the following synonyms
Synonym
Tk08257
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