nadh dehydrogenase subunit 1, maker-scaffold1053_size66761-snap-gene-0.11 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|7994638|sp|O78701.1|NU1M_BRAVA (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1) HSP 1 Score: 117.472 bits (293), Expect = 1.963e-31 Identity = 62/128 (48.44%), Postives = 86/128 (67.19%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLFF-------FPALET 121 ++GALR +AQTISYE++L++++LS+ +F+L+ L+ + + T PL +W +S +AETNRTPFD +EGESELVSGFNVEY FAL +MAEY I+ + LT +LFF FP L T Sbjct: 129 LIGALRAVAQTISYEVTLAIILLSIMLINGSFTLSTLTITQEQMWLILPTWPLAMMWFISTLAETNRTPFDLSEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNALTATLFFGAFHNPLFPELHT 256
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|3122452|sp|Q37603.1|NU1M_PETMA (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1) HSP 1 Score: 117.472 bits (293), Expect = 2.214e-31 Identity = 69/163 (42.33%), Postives = 92/163 (56.44%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLFFFPALETFWTFMPAVVLVQLAIPSLMLLYLTEDLAPS-------HLIYK 156 ++GALR +AQTISYE+SL L++L L +FSL + PL A+W VS +AETNRTPFD EGESELVSGFNVEY G FAL ++AEY IL+ + LT +F P +P + ++ A P ++L P HL++K Sbjct: 131 LIGALRAVAQTISYEVSLGLILLCLVILTGSFSLQAFIYTQEHTWFLLSSWPLAAMWFVSTLAETNRTPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILFMNTLTAIMFLGPLGSNNLNILPIINIMMKATPLIILFLWIRASYPRFRYDQLMHLMWK 293
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|462750|sp|P33502.1|NU1M_ANOQU (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1) HSP 1 Score: 117.087 bits (292), Expect = 3.362e-31 Identity = 59/114 (51.75%), Postives = 79/114 (69.30%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114 ++G LR +AQTISYE+SL+L++LS F + ++ + + + PL +WL SC+AETNRTPFDFAEGESELVSGFNVEY FALI++AEY IL+ S+L +F Sbjct: 134 LLGGLRAVAQTISYEVSLALILLSFIFLIGNYNFLNFYSYQSYIWFIFFCFPLGLVWLASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVVIF 247
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|61214378|sp|Q8M893.1|NU1M_EMBAL (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1 (mitochondrion) [Emballonura alecto]) HSP 1 Score: 117.087 bits (292), Expect = 3.514e-31 Identity = 61/128 (47.66%), Postives = 85/128 (66.41%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLFF----FPALETFWT 124 ++GALR +AQTISYE++L++++LS+ +FSL +LS + PL +W +S +AETNR PFD EGESELVSGFNVEY G FAL ++AEY I+ + +TT+LF P+L F+T Sbjct: 129 LIGALRAVAQTISYEVTLAIILLSVLLMSGSFSLPNLSTTQENLWLIIPAWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGSFALFFLAEYANIIMMNAITTTLFLGLYQNPSLPEFYT 256
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|13631511|sp|O48358.1|NU1M_THYAR (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1) HSP 1 Score: 116.316 bits (290), Expect = 7.808e-31 Identity = 64/119 (53.78%), Postives = 83/119 (69.75%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSL-----AFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114 ++GALR +AQTISYE+SL L++LS+ F+++TF++A S L P + PL ALW +S +AETNR PFDF EGESELVSGFNVEY G FAL ++AEY IL + L+ LF Sbjct: 135 LIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNIAQESIWLV-VPAW----PLAALWYISTLAETNRAPFDFTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILF 248
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|11133876|sp|O47479.1|NU1M_HETBL (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1) HSP 1 Score: 115.546 bits (288), Expect = 1.239e-30 Identity = 57/113 (50.44%), Postives = 83/113 (73.45%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSL 113 ++G++R +AQ+ISYE+S+SL+++S V + SL+ + + + + ++ +W VSC+AET+R PFDFAEGESELVSGFN EYGG FAL++MAEYG IL+ S+L SL Sbjct: 132 LLGSVRAVAQSISYEVSMSLILMSCLLLVGSMSLSMIMKYQFFVWVAFVNFFMMLMWFVSCVAETHRAPFDFAEGESELVSGFNTEYGGVGFALLFMAEYGNILFMSVLVISL 244
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|6093544|sp|O47868.1|NU1M_ALLMI (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1) HSP 1 Score: 115.546 bits (288), Expect = 1.349e-30 Identity = 67/143 (46.85%), Postives = 96/143 (67.13%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIY-AL-TAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLFFFPALETFWTFMPAVVLVQLAIPSLML 141 ++GA+R +AQTISYE++L++++LS+ FSL L+ + + P+Y AL T P + +W S +AETNR PFD EGESELVSGFNVEY FAL ++AEY I+ + LTT+LF P+ TF+PA+ + L +L+L Sbjct: 132 LMGAMRAVAQTISYEVTLAIIVLSIVLLSGGFSLHTLT--VTQEPLYLALATWPSMMMWYTSTLAETNRAPFDLTEGESELVSGFNVEYSASPFALFFLAEYANIMLMNTLTTTLFLSPSTP---TFLPALFTIALMSKALLL 269
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|205829246|sp|B0FWD8.1|NU1M_AEDAE (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1) HSP 1 Score: 115.161 bits (287), Expect = 1.422e-30 Identity = 58/114 (50.88%), Postives = 78/114 (68.42%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114 ++G LR +AQTISYE+SL+L++LS F + ++ + + PL +W SC+AETNRTPFDFAEGESELVSGFNVEY FALI++AEY IL+ S+L + +F Sbjct: 133 LLGGLRAVAQTISYEVSLALILLSFIFLIGNYNFLNFFMYQKYMWFIVFCFPLGLVWFASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFSVIF 246
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|2499233|sp|Q96182.1|NU1M_POLOR (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1) HSP 1 Score: 115.161 bits (287), Expect = 1.676e-30 Identity = 64/126 (50.79%), Postives = 84/126 (66.67%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSL-----AFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLFFFPALET 121 ++GALR +AQTISYE++L L+I+SL F++ TF+ A + L P + PL A+W +S +AETNR PFD EGESELVSGFNVEY G FAL ++AEY IL + L+T LF P+ T Sbjct: 133 LIGALRAVAQTISYEVTLGLIIISLIMFTGGFTLTTFNTAQEAVWLI-LPAW----PLAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNILLMNALSTILFLGPSFNT 253
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|462749|sp|P34846.1|NU1M_ANOGA (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1) HSP 1 Score: 114.39 bits (285), Expect = 2.911e-30 Identity = 60/114 (52.63%), Postives = 77/114 (67.54%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114 ++G LR +AQTISYE+SL+L++LS F V ++ + PL +WL SC+AETNRTPFDFAEGESELVSGFNVEY FALI++AEY IL+ S+L +F Sbjct: 134 LLGGLRAVAQTISYEVSLALILLSFIFLVGNYNFLSFYFYQDYVWFIFFCFPLGLVWLASCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVVIF 247
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|1047895702|ref|YP_054556.2| (NADH dehydrogenase subunit 1 (mitochondrion) [Squilla mantis]) HSP 1 Score: 130.568 bits (327), Expect = 5.105e-34 Identity = 66/114 (57.89%), Postives = 85/114 (74.56%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114 ++G+LR ++QTISYE+SL+L++LS F V F+L S + + C + L+ PL +W VSC+AETNRTPFDFAEGESELVSGFNVEY G FALI++AEY IL+ S L LF Sbjct: 132 LLGSLRAVSQTISYEVSLALILLSFIFLVGGFNLNLFSNYQSDCWLMFLSLPLAGVWFVSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYSSILFMSALFVILF 245
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|670804754|gb|AII41708.1| (NADH dehydrogenase subunit 1 (mitochondrion) [Petrobiellus sp. 2 JZ-2014]) HSP 1 Score: 130.568 bits (327), Expect = 5.678e-34 Identity = 66/114 (57.89%), Postives = 83/114 (72.81%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114 ++G LR +AQTISYE+SL+L++LS F V +F L G + + PLV WL SC+AETNRTPFDFAEGESELVSGFN+EYGG FALI+MAEY IL+ S+L + +F Sbjct: 134 LLGGLRAVAQTISYEVSLALILLSFIFLVGSFDLFKFEGLQEYIWFFVIGFPLVLCWLSSCLAETNRTPFDFAEGESELVSGFNIEYGGGGFALIFMAEYASILFMSMLFSVIF 247
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|702076450|gb|AIW06263.1| (NADH dehydrogenase subunit 1 (mitochondrion) [Blattodea sp. MT-2014]) HSP 1 Score: 130.568 bits (327), Expect = 6.058e-34 Identity = 69/132 (52.27%), Postives = 94/132 (71.21%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTA--PLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLFFFPALETFWTFMPAVV 130 ++G LR +AQTISYE+SL+L++LS F V +++L D + +C + + PL LW VSC+AETNRTPFDFAEGESELVSGFN+EYGG FALI++AEY IL+ S+L +FF L +F+ + V+ Sbjct: 135 LLGGLRSVAQTISYEVSLALILLSFVFLVGSYNLLDF--YYFQCYFWFIWIFLPLSMLWFVSCLAETNRTPFDFAEGESELVSGFNIEYGGGGFALIFLAEYSSILFMSMLFCVIFFGCDLNSFYFYFKLVI 264
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|827046087|ref|YP_009142401.1| (NADH dehydrogenase subunit 1 (mitochondrion) [Squilloides leptosquilla] >gi|820959218|gb|AKH03056.1| NADH dehydrogenase subunit 1 (mitochondrion) [Squilloides leptosquilla]) HSP 1 Score: 130.568 bits (327), Expect = 6.253e-34 Identity = 65/114 (57.02%), Postives = 84/114 (73.68%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114 ++G++R ++QTISYE+SL+L++LS F V F+L S + + C L+ PL +W VSC+AETNRTPFDFAEGESELVSGFNVEY G FALI++AEY IL+ S L LF Sbjct: 132 LLGSIRAVSQTISYEVSLALILLSFIFLVGGFNLGLFSNYQSECWFMFLSLPLAGVWFVSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYSSILFMSALFVVLF 245
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|1079490453|gb|AOW42092.1| (NADH dehydrogenase subunit I, partial (mitochondrion) [Paramunida spiniantennata]) HSP 1 Score: 125.176 bits (313), Expect = 7.419e-34 Identity = 65/114 (57.02%), Postives = 84/114 (73.68%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114 ++G+LR +AQTISYE+SL+L++LS F V FSL S + ++ ++ PL +WL SC+AETNRTPFDFAEGESELVSGFN EY FALI+MAEY IL+ S+L + LF Sbjct: 3 LLGSLRAVAQTISYEVSLALVLLSFIFLVGGFSLELFSLYQSKIWFIMISLPLALVWLASCLAETNRTPFDFAEGESELVSGFNTEYSSGGFALIFMAEYASILFMSMLFSLLF 116 The following BLAST results are available for this feature:
BLAST of nadh dehydrogenase subunit 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 0
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of nadh dehydrogenase subunit 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1053_size66761:58803..59642+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1053_size66761-snap-gene-0.11 ID=maker-scaffold1053_size66761-snap-gene-0.11|Name=nadh dehydrogenase subunit 1|organism=Tigriopus kingsejongensis|type=gene|length=840bp|location=Sequence derived from alignment at scaffold1053_size66761:58803..59642+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nadh dehydrogenase subunit 1' has the following synonyms
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