nadh dehydrogenase subunit 1, maker-scaffold1053_size66761-snap-gene-0.11 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|128634|sp|P18936.1|NU1M_CHICK (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1) HSP 1 Score: 112.079 bits (279), Expect = 2.728e-29 Identity = 63/143 (44.06%), Postives = 93/143 (65.03%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTA--PLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLFFFPALETFWTFMPAVVLVQLAIPSLML 141 ++GALR +AQTISYE++L++++LS ++L+ L+ + + PIY + + PL +W +S +AETNR PFD EGESELVSGFNVEY FA+ ++AEY I+ + LTT LF P +F P + + LA +L+L Sbjct: 136 LIGALRAVAQTISYEVTLAIILLSTIMLSGNYTLSTLA--ITQEPIYLIFSAWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIMLMNTLTTVLFLNP---SFLNLPPELFPIALATKTLLL 273
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|3122437|sp|O03847.1|NU1M_LATCH (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1) HSP 1 Score: 111.694 bits (278), Expect = 3.755e-29 Identity = 60/116 (51.72%), Postives = 80/116 (68.97%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTA--PLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114 ++GALR +AQTISYE+SL L++L++ F+L + ++ I+ LT PL A+W +S +AETNR PFD EGESELVSGFNVEY G FAL ++AEY IL + L+T LF Sbjct: 134 LIGALRAVAQTISYEVSLGLILLAMIIFAGGFTLTTF--NTSQETIWLLTPGWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSTILF 247
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|7994647|sp|O78706.1|NU1M_PHACI (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1) HSP 1 Score: 111.694 bits (278), Expect = 4.201e-29 Identity = 55/114 (48.25%), Postives = 79/114 (69.30%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114 ++GALR +AQTISYE++L++++LS+ +++L +L+ + T PL +W +S +AETNRTPFD EGESELVSGFNVEY FA+ ++AEY IL + +TT LF Sbjct: 129 LIGALRAVAQTISYEVTLAMILLSITLINGSYTLKNLAITQENMWLLVSTWPLAMMWFISTLAETNRTPFDLTEGESELVSGFNVEYSAGPFAMFFLAEYTNILAMNAMTTILF 242
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|2499230|sp|P55779.1|NU1M_GADMO (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1) HSP 1 Score: 111.309 bits (277), Expect = 5.603e-29 Identity = 62/119 (52.10%), Postives = 80/119 (67.23%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSL-----AFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114 +VGALR +AQTISYE+SL L++LS+ F+++TFS + LA P + PL A+W +S + ETNR PFD EGESELVSGFNVEY G FAL ++AEY IL + L+ LF Sbjct: 134 LVGALRAVAQTISYEVSLGLILLSVIIFSGGFTLQTFSTTQEATWLA-LPAW----PLAAMWYISTLEETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAVLF 247
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Match: gi|37154578|sp|P24968.2|NU1M_COTJA (RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1) HSP 1 Score: 111.309 bits (277), Expect = 5.822e-29 Identity = 57/120 (47.50%), Postives = 83/120 (69.17%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYAL--TAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLFFFPA 118 ++GALR +AQTISYE++L++++LS ++L+ LS + + P+Y + + PL +W +S +AETNR PFD EGESELVSGFNVEY FAL ++AEY I+ + LT +LF P+ Sbjct: 136 LIGALRAVAQTISYEVTLAIILLSTIMLSGNYTLSTLS--ITQEPMYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLTITLFLNPS 253
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|61200932|gb|AAX39834.1| (NADH dehydrogenase subunit 1 (mitochondrion) [Tigriopus japonicus]) HSP 1 Score: 145.591 bits (366), Expect = 8.548e-40 Identity = 72/115 (62.61%), Postives = 92/115 (80.00%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLFF 115 ++G+LRGIAQ+ISYEISLSL++LSL V++FSL S +L + PL+ LWLVSC+AETNRTPFDFAEGESELVSG NVE+G F L++M+EYG+IL+FS+LT+ LFF Sbjct: 131 IIGSLRGIAQSISYEISLSLIVLSLMLLVQSFSLEAWSLYLPSSGLSVFLIPLLILWLVSCLAETNRTPFDFAEGESELVSGVNVEFGSVFFVLMFMSEYGMILFFSVLTSGLFF 245
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|118213851|gb|ABK79911.1| (NADH dehydrogenase subunit 1 (mitochondrion) [Tigriopus californicus]) HSP 1 Score: 144.05 bits (362), Expect = 2.972e-39 Identity = 70/114 (61.40%), Postives = 92/114 (80.70%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114 ++G+LRGIAQ+ISYEISLSL+ LSL ++FS++ +L + APL+ LWLVSC+AETNRTPFDFAEGESELVSGFNVE+GG F ++M+EYG+IL+FS+LT++LF Sbjct: 131 LLGSLRGIAQSISYEISLSLIFLSLMLLCQSFSVSGFEYYLPSGCLTLFLAPLMLLWLVSCLAETNRTPFDFAEGESELVSGFNVEFGGLNFVFMFMSEYGMILFFSVLTSNLF 244
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|118213866|gb|ABK79924.1| (NADH dehydrogenase subunit 1 (mitochondrion) [Tigriopus californicus]) HSP 1 Score: 141.739 bits (356), Expect = 2.684e-38 Identity = 68/114 (59.65%), Postives = 91/114 (79.82%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114 ++G+LRGIAQ+ISYEISLSL+ LSL +TFS++ +L + PL+ LWL+SC+AETNRTPFDFAEGESELVSGFNVE+GG F ++M+EYG+IL+FS+LT+++F Sbjct: 131 LLGSLRGIAQSISYEISLSLIFLSLMLLSQTFSVSGFEHYLPSGFLSLFLGPLMLLWLISCLAETNRTPFDFAEGESELVSGFNVEFGGLNFVFMFMSEYGMILFFSLLTSNMF 244
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|21327731|ref|NP_652748.1| (NADH dehydrogenase subunit 1 [Tigriopus japonicus] >gi|21320910|dbj|BAB97219.1| NADH dehydrogenase subunit 1 (mitochondrion) [Tigriopus japonicus]) HSP 1 Score: 140.969 bits (354), Expect = 4.492e-38 Identity = 67/114 (58.77%), Postives = 92/114 (80.70%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114 ++G+LRGIAQ+ISYEISLSL++LS+ ++FS+ + L + PL++LWL+SC+AE+NRTPFDFAEGESELVSGFNVE+GG F L++M+EYG+IL+FS+LT+ LF Sbjct: 131 LIGSLRGIAQSISYEISLSLIVLSMMLLWQSFSIESAADFLPSPGLTVFLFPLLSLWLISCLAESNRTPFDFAEGESELVSGFNVEFGGIFFVLMFMSEYGMILFFSLLTSGLF 244
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|124358965|ref|YP_001023778.1| (NADH dehydrogenase subunit 1 [Tigriopus californicus] >gi|113201762|gb|ABI33093.1| NADH dehydrogenase subunit 1 (mitochondrion) [Tigriopus californicus]) HSP 1 Score: 138.658 bits (348), Expect = 3.373e-37 Identity = 67/114 (58.77%), Postives = 90/114 (78.95%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114 ++G+LRGIAQ+ISYEISLSL+ LSL +TFS++ L + +PL+ LWLVSC+AETNRTPFDF+EGESELVSGFNVE+GG F ++M+EYG+IL+FS+ T+++F Sbjct: 131 LLGSLRGIAQSISYEISLSLIFLSLMLLSQTFSVSGFEHFLPSGCLTLFLSPLMLLWLVSCLAETNRTPFDFSEGESELVSGFNVEFGGLNFVFMFMSEYGMILFFSVWTSNMF 244
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|77020135|ref|YP_337861.1| (NADH dehydrogenase subunit 1 [Lysiosquillina maculata] >gi|75214474|gb|ABA18073.1| NADH dehydrogenase subunit 1 (mitochondrion) [Lysiosquillina maculata]) HSP 1 Score: 133.65 bits (335), Expect = 4.670e-35 Identity = 67/114 (58.77%), Postives = 84/114 (73.68%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114 ++G++R +AQTISYE+SL+L++LS F V F+L S + C + LT PL +W VSC+AETNRTPFDFAEGESELVSGFNVEY G FALI++AEY IL+ S L LF Sbjct: 132 LLGSIRAVAQTISYEVSLALILLSFIFLVGGFNLGLFSDYQKECWLMVLTIPLAGVWFVSCLAETNRTPFDFAEGESELVSGFNVEYSGGGFALIFLAEYSSILFMSALFVILF 245
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|1369124105|ref|YP_009471399.1| (NADH dehydrogenase subunit 1 (mitochondrion) [Clithon retropictum] >gi|1347479717|gb|AVG72790.1| NADH dehydrogenase subunit 1 (mitochondrion) [Clithon retropictum]) HSP 1 Score: 132.88 bits (333), Expect = 8.214e-35 Identity = 68/115 (59.13%), Postives = 86/115 (74.78%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLFF 115 ++GALR IAQTISYE+SL+L++L F+ TF++ ++ L +P+ +WLVSCIAETNR PFDFAEGESELVSGFN+EYG FALI+MAEY IL+ S+LTT LFF Sbjct: 131 LLGALRAIAQTISYEVSLALILLFSLFTSETFNVVEIKSFNELVWFVFLLSPIALVWLVSCIAETNRAPFDFAEGESELVSGFNIEYGSGGFALIFMAEYANILFMSLLTTVLFF 245
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|1150084365|ref|YP_009349856.1| (NADH dehydrogenase subunit 1 (mitochondrion) [Conocephalus melaenus] >gi|1143273067|gb|AQM39992.1| NADH dehydrogenase subunit 1 (mitochondrion) [Conocephalus melaenus]) HSP 1 Score: 132.109 bits (331), Expect = 1.648e-34 Identity = 68/114 (59.65%), Postives = 84/114 (73.68%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLF 114 M+GALR +AQTISYE+SL+L++LSL F V + L D + L PL+ +W SC+AETNRTPFDFAEGESELVSGFNVEYGG FALI++AEY IL+ S+L + LF Sbjct: 136 MLGALRAVAQTISYEVSLTLILLSLVFLVEGYCLLDFIKYQESIWFMFLAFPLMLIWFSSCLAETNRTPFDFAEGESELVSGFNVEYGGGGFALIFLAEYASILFMSMLFSVLF 249
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|1050202008|gb|ANZ03427.1| (NADH dehydrogenase subunit 1 (mitochondrion) [Theodoxus fluviatilis]) HSP 1 Score: 132.109 bits (331), Expect = 1.681e-34 Identity = 70/115 (60.87%), Postives = 85/115 (73.91%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSLFF 115 ++GALR IAQTISYE+SL+L++L F TFSL ++ L +P+ +WLVSCIAETNR PFDFAEGESELVSGFN+EYG FALI+MAEY IL+ S+LTT LFF Sbjct: 131 LLGALRAIAQTISYEVSLALILLFSLFISETFSLTEIKLFNELIWFTFLLSPIALIWLVSCIAETNRAPFDFAEGESELVSGFNIEYGSGGFALIFMAEYANILFMSLLTTILFF 245
BLAST of nadh dehydrogenase subunit 1 vs. nr
Match: gi|594448812|ref|YP_009019489.1| (NADH dehydrogenase subunit 1 (mitochondrion) [Amphiascoides atopus] >gi|563407404|gb|AHB52772.1| NADH dehydrogenase subunit 1 (mitochondrion) [Amphiascoides atopus]) HSP 1 Score: 131.724 bits (330), Expect = 1.897e-34 Identity = 70/113 (61.95%), Postives = 85/113 (75.22%), Query Frame = 0 Query: 1 MVGALRGIAQTISYEISLSLLILSLAFSVRTFSLADLSGHLARCPIYALTAPLVALWLVSCIAETNRTPFDFAEGESELVSGFNVEYGGFMFALIYMAEYGIILYFSILTTSL 113 MVG LR +AQTISYE+SLSL+ LS V + + +S L R P+ LTA + LWL+S +AETNRTPFDFAEGESELVSGFNVEYGG FALI+MAEY IL+FS +++ L Sbjct: 129 MVGGLRSVAQTISYEVSLSLIFLSYLVLVCSLNFTAMS-ELTRTPLVLLTAGIFILWLISGLAETNRTPFDFAEGESELVSGFNVEYGGGGFALIFMAEYSSILFFSAMSSLL 240 The following BLAST results are available for this feature:
BLAST of nadh dehydrogenase subunit 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 0
BLAST of nadh dehydrogenase subunit 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of nadh dehydrogenase subunit 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1053_size66761:58803..59642+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1053_size66761-snap-gene-0.11 ID=maker-scaffold1053_size66761-snap-gene-0.11|Name=nadh dehydrogenase subunit 1|organism=Tigriopus kingsejongensis|type=gene|length=840bp|location=Sequence derived from alignment at scaffold1053_size66761:58803..59642+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nadh dehydrogenase subunit 1' has the following synonyms
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