cuticle protein 6, maker-scaffold1055_size66517-snap-gene-0.7 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000011035 (supercontig:LSalAtl2s:LSalAtl2s743:76924:89115:-1 gene:EMLSAG00000011035 transcript:EMLSAT00000011035 description:"maker-LSalAtl2s743-snap-gene-1.15") HSP 1 Score: 108.612 bits (270), Expect = 1.337e-27 Identity = 57/99 (57.58%), Postives = 68/99 (68.69%), Query Frame = 0 Query: 161 SSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGP----VNDLV---SPVYEGVAPEPVEDTPE 252 SSQ+ SQDEFGN+ +GY+NINSAK E GN YGGV G Y YVDANG+ Q V YIADGLG+R + LP+ P LV +PV+EG E + DTPE Sbjct: 286 SSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQTVSYIADGLGFRTVDSRLPIAPKVPEXEPLVQPEAPVFEG---EQIPDTPE 381 HSP 2 Score: 102.449 bits (254), Expect = 2.420e-25 Identity = 52/92 (56.52%), Postives = 63/92 (68.48%), Query Frame = 0 Query: 161 SSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAPEPVEDTPE 252 SSQ+ SQDEFGN+ +GY+NINSAK E GN YGGV G Y YVDANG+ Q V Y+ADGLG+R P+ +PV+EG E + DTPE Sbjct: 97 SSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQTVSYVADGLGFRT--------PLVQPEAPVFEG---EQIPDTPE 177
BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000011034 (supercontig:LSalAtl2s:LSalAtl2s743:38931:72657:1 gene:EMLSAG00000011034 transcript:EMLSAT00000011034 description:"maker-LSalAtl2s743-augustus-gene-0.7") HSP 1 Score: 109.768 bits (273), Expect = 1.531e-27 Identity = 75/170 (44.12%), Postives = 91/170 (53.53%), Query Frame = 0 Query: 94 AAPYSAGL------PYAAGYHPYSVGLPYAAANLPYT-YTGAPLAASLPVTYQNQLGRIQYNAAPVVAAPLAHVSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAP----EPVEDTPE 252 AAPY G PY GY PYAA YT + AP AA G + ++ AP A SSQ+ SQDEFGN+ +GY+NINSAK E GN YGG G Y YVDANG+ Q V Y+ADGLG+R + LPV P P+ + AP + + DTPE Sbjct: 344 AAPYIGGYAAHHATPYVGGY-----AAPYAAG---YTAHHAAPYAA----------GYVAHHXAPYAAGYGYPASSQFHSQDEFGNLKFGYSNINSAKHEHGNTYGGDAGGYQYVDANGVLQSVSYVADGLGFRTVDSRLPVAPAVPEAEPLVQAPAPVFEGKQIPDTPE 495 HSP 2 Score: 102.064 bits (253), Expect = 7.402e-25 Identity = 68/172 (39.53%), Postives = 94/172 (54.65%), Query Frame = 0 Query: 75 ALLVIVLSSVLAAASAGIIAAPYSAGLPYAAGYHPYSVGLPYAAANLPYTYTGAPLAASLPVTYQNQLGRIQYNAAPVVAA-PLAHVS---------------SQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGP 230 + + + + + A+A+ G+I+ PY G+H Y+ PY +P T AP A L V +Q AP+V P+ HV+ SQ+ +QDEFGN+ +GY+NINSAK E GN YGGV G Y YVDANG+ Q V Y+ADGLG+R + LP+ P Sbjct: 3 SFITLAVLATFASANGGLIS-PYF-------GHHGYA---PY----VPIIRTLAPKEAELKVETIEPPKEVQPIIAPLVPHYPVPHVAPHALHYAAGXGXPAXSQFHAQDEFGNLKFGYSNINSAKHEHGNTYGGVAGGYQYVDANGVLQSVSYVADGLGFRTVDSRLPIAP 159
BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000012778 (supercontig:LSalAtl2s:LSalAtl2s96:46461:47672:-1 gene:EMLSAG00000012778 transcript:EMLSAT00000012778 description:"maker-LSalAtl2s96-augustus-gene-0.9") HSP 1 Score: 92.4337 bits (228), Expect = 5.389e-22 Identity = 63/150 (42.00%), Postives = 72/150 (48.00%), Query Frame = 0 Query: 77 LVIVLSSVLAAASAGIIAAPYSAGLPYAAGYHPYSVGLPYAAANLPYTYTGAPLAASLPVTYQNQLGRIQYNAAPVVAAPLAHVSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNL 226 +IVL++ L AASA I P G PYA PY PY A PYT SSQ+ SQDE+GN YGY N+NS K E GNAYG V G YSY+DA G Q VDY+AD G+R TNL Sbjct: 3 YLIVLTATLVAASASFIGHP---GYPYAP--QPYHQVAPYYA---PYT-----------------------------------PSSQHHSQDEYGNFAYGYENVNSQKSESGNAYGAVKGQYSYIDAYGKSQTVDYVADDYGFRASGTNL 109 HSP 2 Score: 88.5817 bits (218), Expect = 1.153e-20 Identity = 40/67 (59.70%), Postives = 51/67 (76.12%), Query Frame = 0 Query: 160 VSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNL 226 SSQY++QDE+ N ++GYAN NS +QE GN YGGV+GSYSYVD G P V+Y+AD LG+R T+L Sbjct: 183 ASSQYRTQDEYDNFSFGYANENSQRQESGNGYGGVSGSYSYVDXYGKPHTVNYVADDLGFRATGTDL 249 HSP 3 Score: 87.8113 bits (216), Expect = 2.666e-20 Identity = 44/80 (55.00%), Postives = 52/80 (65.00%), Query Frame = 0 Query: 151 PVVAAPLAHV----SSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNL 226 P+ + P H SSQY SQDE+ N NYGY NINS K E GNA V GSYSY+D+ G Q V+Y+ADG G+R TNL Sbjct: 289 PIASIPAYHAPAVASSQYHSQDEYDNYNYGYQNINSQKSESGNARDAVKGSYSYIDSYGKSQTVNYVADGYGFRASGTNL 368
BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000002943 (supercontig:LSalAtl2s:LSalAtl2s168:685699:687161:1 gene:EMLSAG00000002943 transcript:EMLSAT00000002943 description:"augustus_masked-LSalAtl2s168-processed-gene-6.0") HSP 1 Score: 80.1073 bits (196), Expect = 1.223e-18 Identity = 36/65 (55.38%), Postives = 49/65 (75.38%), Query Frame = 0 Query: 161 SSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATN 225 ++Q+ SQ+EFGN N+GY+N NSA +E + YG V GSYSYVDA GI + V Y+AD G+R+ +TN Sbjct: 110 ATQFHSQNEFGNANFGYSNENSALEESRDEYGNVVGSYSYVDATGINRHVSYVADDGGFRITSTN 174
BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000011036 (supercontig:LSalAtl2s:LSalAtl2s743:94413:95794:1 gene:EMLSAG00000011036 transcript:EMLSAT00000011036 description:"maker-LSalAtl2s743-augustus-gene-1.11") HSP 1 Score: 73.559 bits (179), Expect = 1.378e-15 Identity = 59/143 (41.26%), Postives = 74/143 (51.75%), Query Frame = 0 Query: 116 YAAANLPYTYTGAPLAASLPVTY--QNQLGRIQYNAAPVV----AAPLAH-VSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAPEPVEDTP 251 YAA ++P AP + PV + + L + AAPV AA + SSQ+ SQDE GN+ +GY+NINSAK E GN Y GV G Y YVDAN VD + LP P L +PV+E +PV DTP Sbjct: 151 YAAPHVP---AIAPTVKNTPVNFAPHHALNYVSPYAAPVAGQFYAAGFGYPASSQFHSQDELGNLQFGYSNINSAKYEQGNTYSGVNGGYQYVDAN-----VD------------SRLPAAP---LKAPVFER---KPVSDTP 267
BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000011961 (supercontig:LSalAtl2s:LSalAtl2s84:1186001:1208377:1 gene:EMLSAG00000011961 transcript:EMLSAT00000011961 description:"maker-LSalAtl2s84-snap-gene-12.12") HSP 1 Score: 72.4034 bits (176), Expect = 7.844e-15 Identity = 37/76 (48.68%), Postives = 47/76 (61.84%), Query Frame = 0 Query: 162 SQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSP 237 S + SQD+ G N+GY + +K EV A G V G Y Y+DANGI Q V YI+D G+RV +NLP+ P VSP Sbjct: 44 SIFHSQDDQGGYNFGYESDRESKTEVKTADGVVRGKYKYIDANGILQTVYYISDDKGFRVXXSNLPIXPEEPHVSP 119 HSP 2 Score: 59.6918 bits (143), Expect = 1.523e-10 Identity = 28/59 (47.46%), Postives = 41/59 (69.49%), Query Frame = 0 Query: 163 QYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRV 221 Q+ +Q+EFG YG++N ++K E+ G V GSYSY+DANG Q +YI+D LG+R+ Sbjct: 499 QFHAQNEFGEYKYGFSNPTASKNEI-KVDGIVRGSYSYIDANGEFQITNYISDALGFRL 556 HSP 3 Score: 56.9954 bits (136), Expect = 1.421e-9 Identity = 35/89 (39.33%), Postives = 49/89 (55.06%), Query Frame = 0 Query: 164 YQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAPEPVEDTPE 252 + +D+ G+ +GY + +S + E G V GSY Y+DA+G Q V Y+AD G+RVK TN+PV N V V+DTPE Sbjct: 269 FHVKDKDGHYAFGYEDQHSKRTE-ARYEGTVRGSYDYIDADGNVQTVHYVADKEGFRVKGTNIPVA--NQEV-----------VQDTPE 343
BLAST of cuticle protein 6 vs. L. salmonis genes
Match: EMLSAG00000005067 (supercontig:LSalAtl2s:LSalAtl2s266:430378:430665:-1 gene:EMLSAG00000005067 transcript:EMLSAT00000005067 description:"augustus_masked-LSalAtl2s266-processed-gene-3.1") HSP 1 Score: 63.1586 bits (152), Expect = 2.253e-13 Identity = 32/69 (46.38%), Postives = 40/69 (57.97%), Query Frame = 0 Query: 188 GNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAP----EPVEDTPE 252 GN YGGV G Y YVDANG+ Q V Y+ADG G+R + PV P P+ + AP + + DTPE Sbjct: 4 GNTYGGVAGGYQYVDANGVLQSVSYVADGFGFRTVDSRFPVAPAVPEAEPLVQAPAPVFEGKQIPDTPE 72
BLAST of cuticle protein 6 vs. SwissProt
Match: gi|48427980|sp|P82120.1|CUO7_BLACR (RecName: Full=Cuticle protein 7; AltName: Full=BcNCP15.0) HSP 1 Score: 68.5514 bits (166), Expect = 2.292e-13 Identity = 50/146 (34.25%), Postives = 67/146 (45.89%), Query Frame = 0 Query: 113 GLPYAAANL------PYTYTGAPLAASLPVTYQNQLGRIQYNAAPVVAAPLAHVSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAPEPVEDTPE 252 G Y +A+L PYTY +P N A V AP+ +V++ Y +QD G +YG+ + A V +A G GSYSYV G + +Y+AD G+ V + LPVGP V P PV DTPE Sbjct: 8 GFSYTSASLSPYVYAPYTYAASPYI----------------NPASVAVAPV-NVATSYHAQDVIGQASYGHVDAYQAHHAVQDAAGNKVGSYSYVSPEGKVVKTNYVADATGFHVASNALPVGPT----------VVPAPVVDTPE 126
BLAST of cuticle protein 6 vs. SwissProt
Match: gi|48427979|sp|P82119.1|CUO6_BLACR (RecName: Full=Cuticle protein 6; AltName: Full=BcNCP14.9) HSP 1 Score: 63.5438 bits (153), Expect = 1.605e-11 Identity = 43/105 (40.95%), Postives = 53/105 (50.48%), Query Frame = 0 Query: 155 APLAH------VSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYR-VKATNLPVGPVNDLVSPVYEGVAPEPVEDTPE 252 AP+ H VS+QY +QD G + +A N + E + G V G Y YVD G V Y+AD G+R V A NLP P V V PEPV+DTPE Sbjct: 10 APIHHYTVPVQVSTQYHAQDILGQFAFHHAGDNQVRTETKSFDGSVRGLYGYVDPTGKLVNVHYVADSNGFRVVGANNLPEAPSAPAVPDVK---GPEPVQDTPE 111
BLAST of cuticle protein 6 vs. SwissProt
Match: gi|1345867|sp|P80518.1|CU55_ARADI (RecName: Full=Adult-specific rigid cuticular protein 15.5; Short=ACP 15.5) HSP 1 Score: 56.6102 bits (135), Expect = 6.613e-9 Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 0 Query: 165 QSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVK-ATNLP 227 ++QD GN + Y N+A+ E+G+A G GSY+ D +G +RVDY+AD G+R TN P Sbjct: 18 KTQDGIGNYAFNYGTANNARAEIGDAAGNKQGSYTITDVDGRARRVDYVADAAGFRASVKTNEP 81
BLAST of cuticle protein 6 vs. nr
Match: gi|1022762667|gb|KZS08364.1| (putative Cuticular protein 72Eb [Daphnia magna]) HSP 1 Score: 82.8037 bits (203), Expect = 1.964e-15 Identity = 41/92 (44.57%), Postives = 57/92 (61.96%), Query Frame = 0 Query: 161 SSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAPEPVEDTPE 252 +SQY +QDE G +GYA+ A + +A+G GSY+Y + G RV Y AD G+RV + +LPV PV++LV+PV PV+DTPE Sbjct: 64 ASQYHAQDELGQARFGYAHPGQAATNIQDAFGNQVGSYAYFNPEGKEVRVSYTADSRGFRVLSNDLPVAPVSNLVAPV-------PVQDTPE 148
BLAST of cuticle protein 6 vs. nr
Match: gi|1228398190|ref|XP_021957992.1| (cuticle protein 6-like [Folsomia candida] >gi|1215263825|gb|OXA50142.1| Cuticle protein 6 [Folsomia candida]) HSP 1 Score: 82.0333 bits (201), Expect = 2.106e-15 Identity = 40/71 (56.34%), Postives = 52/71 (73.24%), Query Frame = 0 Query: 161 SSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGL-GYRVKATNLPVGP 230 S+Q+ +QDE G +YGY+ SAK E +A+G G YSY+DANGI Q V+YI+D + G+RV ATNLPVGP Sbjct: 32 STQFHAQDELGQYSYGYSGGPSAKTESKDAFGVTRGGYSYIDANGITQTVNYISDPVNGFRVAATNLPVGP 102
BLAST of cuticle protein 6 vs. nr
Match: gi|225714002|gb|ACO12847.1| (Cuticle protein 7 [Lepeophtheirus salmonis]) HSP 1 Score: 81.6481 bits (200), Expect = 2.411e-15 Identity = 37/66 (56.06%), Postives = 50/66 (75.76%), Query Frame = 0 Query: 160 VSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATN 225 V++Q+ SQDEFGN N+GY+N +SA +E + YG V GSYSYVDA GI + V Y+AD G+R+ +TN Sbjct: 86 VATQFHSQDEFGNANFGYSNESSALEESRDEYGNVVGSYSYVDATGINRHVSYVADDGGFRITSTN 151
BLAST of cuticle protein 6 vs. nr
Match: gi|1325279864|ref|XP_023324592.1| (uncharacterized protein LOC111698474 [Eurytemora affinis]) HSP 1 Score: 85.1149 bits (209), Expect = 2.617e-15 Identity = 46/93 (49.46%), Postives = 60/93 (64.52%), Query Frame = 0 Query: 161 SSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGL-GYRVKATNLPVGPVNDLVSPVYEGVAPEPVEDTPE 252 SSQ+ +QDEFG ++GY N NSA+ E +A+G GSY YVDANG+ Q YIAD + G+RV ATN+PV N V+ + E V +TPE Sbjct: 305 SSQFHAQDEFGQHSFGYQNENSARAESKDAFGVTRGSYQYVDANGVLQTTTYIADPVNGFRVAATNIPVAVANPAVA-IQEAVM-----ETPE 391 HSP 2 Score: 82.8037 bits (203), Expect = 1.424e-14 Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 0 Query: 161 SSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGL-GYRVKATNLPVGPVNDLVSPVYEGVAPEPVEDTPE 252 SSQ+ +QDEFG ++GY N NSA+ E +A G GSY YVDANG+ Q YIAD + G+RV ATN+PV N V+ + E V +TPE Sbjct: 96 SSQFHAQDEFGQHSFGYQNENSARVESKDALGVTRGSYQYVDANGVLQTTTYIADPINGFRVAATNIPVAVANPAVA-IQEAVM-----ETPE 182
BLAST of cuticle protein 6 vs. nr
Match: gi|1022733386|gb|KZR98782.1| (Uncharacterized protein APZ42_005646, partial [Daphnia magna]) HSP 1 Score: 83.1889 bits (204), Expect = 3.661e-15 Identity = 48/104 (46.15%), Postives = 61/104 (58.65%), Query Frame = 0 Query: 149 AAPVVAAPLAHVSSQYQSQDEFGNINYGYANINSAKQEVGNAYGGVTGSYSYVDANGIPQRVDYIADGLGYRVKATNLPVGPVNDLVSPVYEGVAPEPVEDTPE 252 AAPV + SSQY +QDE G +GYA A +A G GSY+Y++ NG RV Y AD G+RV + +LPV PV + V+PV VAP V+DTPE Sbjct: 54 AAPVPYGVPSFTSSQYHAQDEMGQAKFGYAFPGQASSNYRDAMGNQIGSYAYLNPNGKEVRVSYTADHRGFRVLSNDLPVAPVANSVAPVANLVAPVQVQDTPE 157 The following BLAST results are available for this feature:
BLAST of cuticle protein 6 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 7
BLAST of cuticle protein 6 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 3
BLAST of cuticle protein 6 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1055_size66517:40135..53020- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1055_size66517-snap-gene-0.7 ID=maker-scaffold1055_size66517-snap-gene-0.7|Name=cuticle protein 6|organism=Tigriopus kingsejongensis|type=gene|length=12886bp|location=Sequence derived from alignment at scaffold1055_size66517:40135..53020- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cuticle protein 6' has the following synonyms
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