60s ribosomal protein l37a, maker-scaffold105_size367834-snap-gene-2.32 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 60s ribosomal protein l37a vs. L. salmonis genes
Match: EMLSAG00000003239 (supercontig:LSalAtl2s:LSalAtl2s178:228456:228800:-1 gene:EMLSAG00000003239 transcript:EMLSAT00000003239 description:"augustus_masked-LSalAtl2s178-processed-gene-2.4") HSP 1 Score: 154.066 bits (388), Expect = 2.652e-50 Identity = 75/93 (80.65%), Postives = 82/93 (88.17%), Query Frame = 0 Query: 31 AKRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRSAIRRLREIKEL 123 AKRTKKVGVVGKYGTRYGASLRKTVKKME++QH+KY C+FCGK MKR+A GIW C KNCRV VAGGAW +T AAASVRSAIRRLRE+KEL Sbjct: 2 AKRTKKVGVVGKYGTRYGASLRKTVKKMEITQHSKYVCTFCGKENMKREAXGIWKCGTKNCRVIVAGGAWXXSTXAAASVRSAIRRLREMKEL 94
BLAST of 60s ribosomal protein l37a vs. SwissProt
Match: gi|51701783|sp|Q751L1.1|RL43_ASHGO (RecName: Full=60S ribosomal protein L43) HSP 1 Score: 127.102 bits (318), Expect = 2.833e-38 Identity = 62/92 (67.39%), Postives = 75/92 (81.52%), Query Frame = 0 Query: 31 AKRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRSAIRRLREIKE 122 AKRTKKVG+ GKYG RYG+SLR+ VKK+EV QHA+Y CSFCGK +KR A GIW CS +C+ TVAGGA+ ++T AAA+VRS IRRLRE+ E Sbjct: 2 AKRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHARYDCSFCGKKAVKRGAAGIWNCS--SCKKTVAGGAYTFSTAAAATVRSTIRRLREMAE 91
BLAST of 60s ribosomal protein l37a vs. SwissProt
Match: gi|338819341|sp|P0CX26.1|RL43B_YEAST (RecName: Full=60S ribosomal protein L43-B; AltName: Full=L37a; AltName: Full=Large ribosomal subunit protein eL43-B; AltName: Full=YL35 >gi|338819342|sp|P0CX25.1|RL43A_YEAST RecName: Full=60S ribosomal protein L43-A; AltName: Full=L37a; AltName: Full=Large ribosomal subunit protein eL43-A; AltName: Full=YL35) HSP 1 Score: 124.405 bits (311), Expect = 3.713e-37 Identity = 62/92 (67.39%), Postives = 74/92 (80.43%), Query Frame = 0 Query: 31 AKRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRSAIRRLREIKE 122 AKRTKKVG+ GKYG RYG+SLR+ VKK+E+ QHA+Y CSFCGK T+KR A GIW CS C+ TVAGGA+ +T AAA+VRS IRRLRE+ E Sbjct: 2 AKRTKKVGITGKYGVRYGSSLRRQVKKLEIQQHARYDCSFCGKKTVKRGAAGIWTCS--CCKKTVAGGAYTVSTAAAATVRSTIRRLREMVE 91
BLAST of 60s ribosomal protein l37a vs. SwissProt
Match: gi|160358635|sp|A4S6Z4.1|RL37A_OSTLU (RecName: Full=60S ribosomal protein L37a) HSP 1 Score: 122.479 bits (306), Expect = 1.918e-36 Identity = 64/92 (69.57%), Postives = 71/92 (77.17%), Query Frame = 0 Query: 31 AKRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRSAIRRLREIKE 122 AKRTKKVG+VGKYGTRYGASLRK VKK EVSQH+K+ C FCGK MKRKAVGIW C K C T AGGA++ T + +VRS IRRLRE E Sbjct: 2 AKRTKKVGIVGKYGTRYGASLRKVVKKQEVSQHSKFFCDFCGKYGMKRKAVGIWSC--KGCNKTKAGGAYSLNTGGSVTVRSTIRRLREATE 91
BLAST of 60s ribosomal protein l37a vs. SwissProt
Match: gi|51701757|sp|Q6FRG6.1|RL43_CANGA (RecName: Full=60S ribosomal protein L43 [[Candida] glabrata CBS 138]) HSP 1 Score: 122.479 bits (306), Expect = 2.004e-36 Identity = 60/92 (65.22%), Postives = 74/92 (80.43%), Query Frame = 0 Query: 31 AKRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRSAIRRLREIKE 122 AKRTKKVG+ GKYG RYG+SLR+ VKK+EV QHA+Y CSFCGK T++R A GIW C +C+ TVAGGA+ +T AAA+VRS IRRLR++ E Sbjct: 2 AKRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHARYDCSFCGKKTVRRGAAGIWSC--HSCKKTVAGGAYTVSTAAAATVRSTIRRLRDMVE 91
BLAST of 60s ribosomal protein l37a vs. SwissProt
Match: gi|75247667|sp|Q8RXU5.1|R37A2_ARATH (RecName: Full=60S ribosomal protein L37a-2) HSP 1 Score: 121.324 bits (303), Expect = 6.189e-36 Identity = 62/89 (69.66%), Postives = 71/89 (79.78%), Query Frame = 0 Query: 31 AKRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRSAIRRLRE 119 AKRTKKVG+VGKYGTRYGAS+RK +KKMEVSQH+KY C FCGK +KRKAVGIW C K+C AGGA+ T +A +VRS IRRLRE Sbjct: 2 AKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGC--KDCGKVKAGGAYTMNTASAVTVRSTIRRLRE 88
BLAST of 60s ribosomal protein l37a vs. SwissProt
Match: gi|160358747|sp|Q00VK4.2|RL37A_OSTTA (RecName: Full=60S ribosomal protein L37a) HSP 1 Score: 120.553 bits (301), Expect = 1.013e-35 Identity = 63/92 (68.48%), Postives = 71/92 (77.17%), Query Frame = 0 Query: 31 AKRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRSAIRRLREIKE 122 AKRTKKVG+VGKYGTRYGASLRK VKK EVSQH+K+ C FCGK MKR+AVGIW C K C T AGGA++ T + +VRS IRRLRE E Sbjct: 2 AKRTKKVGIVGKYGTRYGASLRKVVKKTEVSQHSKFFCDFCGKYGMKRQAVGIWCC--KGCNKTKAGGAYSLNTGGSVTVRSTIRRLREATE 91
BLAST of 60s ribosomal protein l37a vs. SwissProt
Match: gi|1027923671|sp|P0DKK1.1|RL371_ORYSJ (RecName: Full=60S ribosomal protein L37a-1 >gi|1027923672|sp|P0DKK2.1|RL372_ORYSJ RecName: Full=60S ribosomal protein L37a-2) HSP 1 Score: 120.168 bits (300), Expect = 1.809e-35 Identity = 62/91 (68.13%), Postives = 70/91 (76.92%), Query Frame = 0 Query: 32 KRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRSAIRRLREIKE 122 KRTKK G+VGKYGTRYGASLRK +KKMEVSQH+KY C FCGK +KRKAVGIW C K+C AGGA+ T +A +VRS IRRLRE E Sbjct: 3 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGC--KDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTE 91
BLAST of 60s ribosomal protein l37a vs. SwissProt
Match: gi|6831602|sp|Q9XHE4.1|RL37A_GOSHI (RecName: Full=60S ribosomal protein L37a) HSP 1 Score: 118.627 bits (296), Expect = 5.773e-35 Identity = 62/91 (68.13%), Postives = 69/91 (75.82%), Query Frame = 0 Query: 32 KRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRSAIRRLREIKE 122 KRTKK G+VGKYGTRYGASLRK +KKMEVSQH+KY C FCGK +KRKAVGIW C K C AGGA+ T +A +VRS IRRLRE E Sbjct: 3 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGC--KACGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91
BLAST of 60s ribosomal protein l37a vs. SwissProt
Match: gi|6831607|sp|Q9ZRS8.1|RL37A_PSEMZ (RecName: Full=60S ribosomal protein L37a) HSP 1 Score: 118.627 bits (296), Expect = 6.953e-35 Identity = 61/91 (67.03%), Postives = 70/91 (76.92%), Query Frame = 0 Query: 32 KRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRSAIRRLREIKE 122 KRTKK G+VGKYGTRYGASLRK +KKMEVSQH+K+ C FCGK +KRKAVGIW C K+C AGGA+ T +A +VRS IRRLRE E Sbjct: 3 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKFAVKRKAVGIWGC--KDCGKVKAGGAYTLNTPSAVTVRSTIRRLREQTE 91
BLAST of 60s ribosomal protein l37a vs. SwissProt
Match: gi|1173045|sp|P43209.2|RL37A_BRARR (RecName: Full=60S ribosomal protein L37a) HSP 1 Score: 116.701 bits (291), Expect = 3.904e-34 Identity = 62/90 (68.89%), Postives = 71/90 (78.89%), Query Frame = 0 Query: 31 AKRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRS-AIRRLRE 119 AKRTKKVG+VGKYGTRYGAS+RK +KKMEVSQH+KY C FCGK +KRKAVGIW C K+C AGGA+ T +A +VRS IRRLRE Sbjct: 2 AKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGC--KDCGKVKAGGAYTMNTASAVTVRSHTIRRLRE 89
BLAST of 60s ribosomal protein l37a vs. nr
Match: gi|961376484|gb|ALS04986.1| (60S ribosomal protein L37a [Calanus sinicus]) HSP 1 Score: 165.622 bits (418), Expect = 5.965e-51 Identity = 78/93 (83.87%), Postives = 86/93 (92.47%), Query Frame = 0 Query: 31 AKRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRSAIRRLREIKEL 123 AKRTKKVG+ GKYGTRYGASLRKTVKKME+SQH+KYTC+FCGK+ MKRK VGIW C KNCRV VAGGAWNY+TTAAASVRSA+RRLRE+KEL Sbjct: 2 AKRTKKVGITGKYGTRYGASLRKTVKKMEISQHSKYTCTFCGKDKMKRKVVGIWACHDKNCRVVVAGGAWNYSTTAAASVRSAVRRLRELKEL 94
BLAST of 60s ribosomal protein l37a vs. nr
Match: gi|961376736|gb|ALS05112.1| (60S ribosomal protein L37a [Labidocera rotunda]) HSP 1 Score: 164.851 bits (416), Expect = 1.139e-50 Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 0 Query: 31 AKRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRSAIRRLREIKEL 123 AKRTKKVG+ GKYGTRYGASLRKTVKKME+SQH+KY C+FCGK MKRKAVGIW C KNCR+ VAGGAWNYTTTAAASVRSA+RRLREIKEL Sbjct: 2 AKRTKKVGITGKYGTRYGASLRKTVKKMEISQHSKYVCTFCGKENMKRKAVGIWQCGTKNCRIRVAGGAWNYTTTAAASVRSAVRRLREIKEL 94
BLAST of 60s ribosomal protein l37a vs. nr
Match: gi|961375050|gb|ALS04269.1| (60S ribosomal protein L37a [Acartia pacifica] >gi|961375052|gb|ALS04270.1| 60S ribosomal protein L37a [Acartia pacifica] >gi|961375054|gb|ALS04271.1| 60S ribosomal protein L37a [Acartia pacifica] >gi|961375056|gb|ALS04272.1| 60S ribosomal protein L37a [Acartia pacifica]) HSP 1 Score: 164.851 bits (416), Expect = 1.217e-50 Identity = 80/93 (86.02%), Postives = 85/93 (91.40%), Query Frame = 0 Query: 31 AKRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRSAIRRLREIKEL 123 AKRTKKVG+ GKYGTRYGASLRKTVKKME+SQHAKYTC+FCGK MKRKAVGIW C KNCRV VAGGAWNYTTTA ASVRSA+RRLRE+KEL Sbjct: 2 AKRTKKVGITGKYGTRYGASLRKTVKKMEISQHAKYTCTFCGKENMKRKAVGIWQCGVKNCRVRVAGGAWNYTTTAGASVRSAVRRLREMKEL 94
BLAST of 60s ribosomal protein l37a vs. nr
Match: gi|1325307159|ref|XP_023335197.1| (60S ribosomal protein L37a-like [Eurytemora affinis] >gi|961376128|gb|ALS04808.1| 60S ribosomal protein L37a [Pseudodiaptomus poplesia] >gi|961376902|gb|ALS05195.1| 60S ribosomal protein L37a [Tortanus dextrilobatus] >gi|961376972|gb|ALS05230.1| 60S ribosomal protein L37a [Tortanus dextrilobatus]) HSP 1 Score: 163.696 bits (413), Expect = 3.160e-50 Identity = 78/93 (83.87%), Postives = 85/93 (91.40%), Query Frame = 0 Query: 31 AKRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRSAIRRLREIKEL 123 AKRTKKVG+ GKYGTRYGASLRKTVKKME+SQH+KY C+FCGK MKRKAVGIW C KNCR+ VAGGAWNYTTTAAASVRSA+RRLRE+KEL Sbjct: 2 AKRTKKVGITGKYGTRYGASLRKTVKKMEISQHSKYVCTFCGKENMKRKAVGIWQCGTKNCRIRVAGGAWNYTTTAAASVRSAVRRLREMKEL 94
BLAST of 60s ribosomal protein l37a vs. nr
Match: gi|290562533|gb|ADD38662.1| (60S ribosomal protein L37a [Lepeophtheirus salmonis]) HSP 1 Score: 160.999 bits (406), Expect = 3.267e-49 Identity = 78/93 (83.87%), Postives = 85/93 (91.40%), Query Frame = 0 Query: 31 AKRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRSAIRRLREIKEL 123 AKRTKKVGVVGKYGTRYGASLRKTVKKME++QH+KY C+FCGK MKR+AVGIW C KNCRV VAGGAW Y+TTAAASVRSAIRRLRE+KEL Sbjct: 2 AKRTKKVGVVGKYGTRYGASLRKTVKKMEITQHSKYVCTFCGKENMKREAVGIWKCGTKNCRVIVAGGAWTYSTTAAASVRSAIRRLREMKEL 94
BLAST of 60s ribosomal protein l37a vs. nr
Match: gi|961376682|gb|ALS05085.1| (60S ribosomal protein L37a [Centropages tenuiremis]) HSP 1 Score: 159.073 bits (401), Expect = 1.930e-48 Identity = 76/93 (81.72%), Postives = 84/93 (90.32%), Query Frame = 0 Query: 31 AKRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRSAIRRLREIKEL 123 AKRTKKVG+ GKYGTRYGASLRKTVKKME+SQH+KY C+FCGK MKRKAVGIW C +NCR VAGGAWNY+TTAAASVRSA+RRLRE+KEL Sbjct: 2 AKRTKKVGITGKYGTRYGASLRKTVKKMEISQHSKYICTFCGKENMKRKAVGIWQCGTRNCRRRVAGGAWNYSTTAAASVRSAVRRLREMKEL 94
BLAST of 60s ribosomal protein l37a vs. nr
Match: gi|961376714|gb|ALS05101.1| (60S ribosomal protein L37a [Centropages tenuiremis]) HSP 1 Score: 157.918 bits (398), Expect = 5.654e-48 Identity = 75/93 (80.65%), Postives = 84/93 (90.32%), Query Frame = 0 Query: 31 AKRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRSAIRRLREIKEL 123 AKRTKKVG+ GKYGTRYGA+LRKTVKKME+SQH+KY C+FCGK MKRKAVGIW C +NCR VAGGAWNY+TTAAASVRSA+RRLRE+KEL Sbjct: 2 AKRTKKVGITGKYGTRYGAALRKTVKKMEISQHSKYICTFCGKENMKRKAVGIWQCGTRNCRRRVAGGAWNYSTTAAASVRSAVRRLREMKEL 94
BLAST of 60s ribosomal protein l37a vs. nr
Match: gi|961375804|gb|ALS04646.1| (60S ribosomal protein L37a [Pseudodiaptomus poplesia] >gi|961376130|gb|ALS04809.1| 60S ribosomal protein L37a [Pseudodiaptomus poplesia]) HSP 1 Score: 155.606 bits (392), Expect = 5.236e-47 Identity = 74/93 (79.57%), Postives = 82/93 (88.17%), Query Frame = 0 Query: 31 AKRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRSAIRRLREIKEL 123 AKRTKKVG+ GKYGTRYGASLRK VKKME+SQH+KY C+FCGK MKR AVGIW C KNCRV VAGGAW Y+TTAAA+VRSA+RRLRE+KEL Sbjct: 2 AKRTKKVGITGKYGTRYGASLRKIVKKMEISQHSKYVCTFCGKENMKRVAVGIWKCGTKNCRVVVAGGAWTYSTTAAATVRSAVRRLREMKEL 94
BLAST of 60s ribosomal protein l37a vs. nr
Match: gi|158187892|gb|ABW23235.1| (ribosomal protein rpl37a [Eurythoe complanata]) HSP 1 Score: 154.066 bits (388), Expect = 1.777e-46 Identity = 76/92 (82.61%), Postives = 85/92 (92.39%), Query Frame = 0 Query: 31 AKRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRSAIRRLREIKE 122 AKRTKKVG+VGKYGTRYGASLRKT+KK+EVSQH KYTCSFCGK TMKR+AVGIW C K+CR TVAGGAW Y+TTAAA+VRSA+RRLRE+KE Sbjct: 2 AKRTKKVGIVGKYGTRYGASLRKTIKKLEVSQHGKYTCSFCGKETMKRRAVGIWSC--KSCRKTVAGGAWVYSTTAAATVRSAVRRLREVKE 91
BLAST of 60s ribosomal protein l37a vs. nr
Match: gi|961376248|gb|ALS04868.1| (60S ribosomal protein L37a [Pseudodiaptomus poplesia]) HSP 1 Score: 154.066 bits (388), Expect = 1.808e-46 Identity = 73/93 (78.49%), Postives = 82/93 (88.17%), Query Frame = 0 Query: 31 AKRTKKVGVVGKYGTRYGASLRKTVKKMEVSQHAKYTCSFCGKNTMKRKAVGIWFCSQKNCRVTVAGGAWNYTTTAAASVRSAIRRLREIKEL 123 AKRTKKVG+ GKYGTRYGASLRK VKKME+SQH+KY C+FCGK MKR AVGIW C KNCRV VAGGAW Y+T+AAA+VRSA+RRLRE+KEL Sbjct: 2 AKRTKKVGITGKYGTRYGASLRKIVKKMEISQHSKYVCTFCGKENMKRVAVGIWKCGTKNCRVVVAGGAWTYSTSAAATVRSAVRRLREMKEL 94 The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l37a vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of 60s ribosomal protein l37a vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of 60s ribosomal protein l37a vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold105_size367834:265266..268598+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold105_size367834-snap-gene-2.32 ID=maker-scaffold105_size367834-snap-gene-2.32|Name=60s ribosomal protein l37a|organism=Tigriopus kingsejongensis|type=gene|length=3333bp|location=Sequence derived from alignment at scaffold105_size367834:265266..268598+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '60s ribosomal protein l37a' has the following synonyms
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