conserved hypothetical protein, maker-scaffold1061_size65987-snap-gene-0.8 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000005167 (supercontig:LSalAtl2s:LSalAtl2s272:99930:102894:1 gene:EMLSAG00000005167 transcript:EMLSAT00000005167 description:"maker-LSalAtl2s272-augustus-gene-1.13") HSP 1 Score: 74.3294 bits (181), Expect = 2.133e-15 Identity = 47/135 (34.81%), Postives = 69/135 (51.11%), Query Frame = 0 Query: 99 GTCFTTSECVARNGQLRGTCAAGFGTCCVFVVQATGGQVNQNCTYLLDPTV-DRANAGDARTIMYTVNRINSNICSLRLDLDTFNIQGPAVTTVTSLGPCVDQFTIQSKTGLT-----TICGQN-SGEHTPLATT 226 GTC+++SEC + G+ G CAAGFG CC+F+V G +++N +Y P A +T+ R SNICS+RLD + PA + D+ TI S +G + +CG SG+H + TT Sbjct: 3 GTCYSSSECAEKGGRAAGNCAAGFGVCCLFIVDTCGSTISRNNSYFRSPGFPTAFTVTAATACAFTIQRCQSNICSIRLDFENLIXSEPADGACGANN--FDKITITSPSGFSPPGPGGLCGDGLSGQHMYVDTT 135
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000009163 (supercontig:LSalAtl2s:LSalAtl2s577:92059:93975:-1 gene:EMLSAG00000009163 transcript:EMLSAT00000009163 description:"maker-LSalAtl2s577-augustus-gene-1.7") HSP 1 Score: 74.7146 bits (182), Expect = 2.363e-15 Identity = 51/132 (38.64%), Postives = 72/132 (54.55%), Query Frame = 0 Query: 106 ECVARNGQLRGTCAAGFGTCCVFVVQATGGQVNQNCTYLLDPTVDRANAGDARTI--MYTVNRINSNICSLRLDLDTFNIQGPAVTT-VTSLGPC-VDQFTIQSKTGLT-TICGQNSGEHTPLATTQDRNPA 232 EC +R G G CA+G+GTCC+F GG + +N T LL+ + +RT YT+ R + N+C +RLD TF + GP V+T + G C D F++ S G + ICG NSG+H + Q N A Sbjct: 79 ECASRGGTAGGACASGYGTCCMFTADC-GGTITENST-LLEIS--------SRTTDCTYTICRCSDNVCRIRLDFMTFVLSGPTVSTDGANQGDCNTDSFSLTSSQGASPVICGFNSGQHIIVEADQGCNTA 200
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000012914 (supercontig:LSalAtl2s:LSalAtl2s981:97107:102445:1 gene:EMLSAG00000012914 transcript:EMLSAT00000012914 description:"augustus_masked-LSalAtl2s981-processed-gene-1.0") HSP 1 Score: 73.9442 bits (180), Expect = 3.736e-15 Identity = 40/118 (33.90%), Postives = 64/118 (54.24%), Query Frame = 0 Query: 75 LFNVVTFDNAQCTSNDVTNGEARLGTCFTTSECVARNGQLRGTCAAGFGTCCVFVVQATGGQVNQNCTYLLDPTVDRANAGDARTIMYTVNRINSNICSLRLDLDTFNIQGPAVTTVT 192 +F V+ F N C+ G ++ GTC+T++EC +R G G+CA+GFG CC F + + G +NCTY + + + T+ + + ++C LRLD +F I GP+ T T Sbjct: 40 VFQVIRFRNDACS------GGSKNGTCYTSAECESRGGTNGGSCASGFGVCCTFTSRCS-GMSRENCTYF------ESVGNEQGSCSLTICKCDESVCQLRLDFQSFMITGPSTLTET 144
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000003421 (supercontig:LSalAtl2s:LSalAtl2s188:147091:148664:1 gene:EMLSAG00000003421 transcript:EMLSAT00000003421 description:"snap_masked-LSalAtl2s188-processed-gene-1.4") HSP 1 Score: 71.2478 bits (173), Expect = 3.534e-14 Identity = 59/174 (33.91%), Postives = 83/174 (47.70%), Query Frame = 0 Query: 73 FSLFNVVTFDNAQCTSNDVTNGEARLGTCFTTSECVARNGQLRGTCAAGFGTCCVFVVQATGGQ-VNQNCTYLLD---PTVDRANAGDARTIMYTVNRINSNICSLRLDLDTFNIQ-GPAVTTVTSLGPC----VDQFTIQSKTGLTT--ICGQNSGEHTPLA-TTQDRNPARR 234 LFNVV F N C N N E G C+T+ EC G+ CA+GFG CCVFV G + + Q Y + P VDR M ++ ++NIC LRLD F++ G ++ PC ++ FT GL T +CG N G+H ++ +Q +P+ R Sbjct: 30 LGLFNVVQFANDVC--NSTVNNEQ--GICYTSQECNRFGGKAVSPCASGFGVCCVFVKNCRGDRSMGQEIMYFQNDNYPDVDRL----PNMCMLSIPIKDTNICQLRLDFIEFDLDPGSQFSS-----PCDQDYLEIFTNSGSDGLGTGKLCGNNKGQHLYISLMSQFDSPSMR 190
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000009824 (supercontig:LSalAtl2s:LSalAtl2s639:583718:585337:-1 gene:EMLSAG00000009824 transcript:EMLSAT00000009824 description:"maker-LSalAtl2s639-snap-gene-5.20") HSP 1 Score: 66.2402 bits (160), Expect = 1.772e-12 Identity = 51/166 (30.72%), Postives = 78/166 (46.99%), Query Frame = 0 Query: 74 SLFNVVTFDNAQCTSNDVTNGEARLGTCFTTSECVARNGQLRGTCAAGFGTCCVFVVQATGGQVNQNCTYLLDPTVDRANAGDARTIMYTVNR--------INSNICSLRLDLDTFNI-QGPAVTTVTSLGPCVDQ---FTIQSKTGLTTICGQNSGEHTPLATTQ 227 +L NVVTF N+ CT+ T +R GTCF++ EC + GQ+ GTCA+GFG CC+F + + L P A + + N I+ +IC +RLD T + Q P T G C ++ T S+ + + CG + +H + T + Sbjct: 65 NLLNVVTFRNSPCTAVSSTASSSRQGTCFSSEECSQKGGQIDGTCASGFGVCCIFKIVRIFKILEPPVVSPLVPPQVVATHFPEQIWVKYSNELKQSNCQPISIDICRIRLDFKTLQLRQAPTAT-----GVCGNENIAVTSTSRNNIPSFCGILTNQHMYITTAE 225
BLAST of conserved hypothetical protein vs. nr
Match: gi|1325303738|ref|XP_023333450.1| (uncharacterized protein LOC111705205 [Eurytemora affinis]) HSP 1 Score: 107.842 bits (268), Expect = 1.014e-22 Identity = 65/155 (41.94%), Postives = 86/155 (55.48%), Query Frame = 0 Query: 72 VFSLFNVVTFDNAQCTSNDVTNGEARLGTCFTTSECVARNGQLRGTCAAGFGTCCVFVVQATGGQVNQNCTYLLDPTVDRANAGDARTIMYTVNRINSNICSLRLDLDTFNIQGPAVTTVTSLGP----CVDQFTIQSKTGLT--TICGQNSGEH 220 +FSLFN+V F N C S D +GTCFTTSEC ++ G G+CAAGFG CC+F GG + N TY+ +P A A T +TVN+ ++IC LRLD T ++QG + T G D T+ +TG+ ICG N+GEH Sbjct: 90 IFSLFNIVQFPNLACNSLDTV---FPVGTCFTTSECTSKGGTTSGSCAAGFGVCCLFKSSTCGGTFSNNMTYITNPGFP-ATFNTAGTCTFTVNKCQADICQLRLDFLT-SVQGVSANTQGCCGAGCTTAADSLTVTGQTGVNPPVICGTNTGEH 239
BLAST of conserved hypothetical protein vs. nr
Match: gi|1238837206|ref|XP_022237737.1| (uncharacterized protein LOC106478433 [Limulus polyphemus]) HSP 1 Score: 105.145 bits (261), Expect = 1.318e-22 Identity = 59/163 (36.20%), Postives = 90/163 (55.21%), Query Frame = 0 Query: 73 FSLFNVVTFDNAQCTSNDVTNGEARLGTCFTTSECVARNGQLRGTCAAGFGTCCVFVVQATGGQVNQNCTYLLDPTVDRANAGDARTIMYTVNRINSNICSLRLDLDTFNIQGPAVTTVTSLGPC-VDQFTIQSK---TGLTTICGQNSGEHTPLATTQDRNP 231 F +FN+ F N CT D T GTC++ +C+ + G G+CA GFG CC+F +Q+ GG V+ N TY ++P ++ + M TV +I+SNIC LRLDL+ F+ GP + T G C D F++ + + + +CG+NSG+H + P Sbjct: 46 FGVFNIFQFPNIPCTVGDQT------GTCYSALDCIGKGGNFSGSCAKGFGVCCLF-IQSCGGSVSDNNTYFVNPGYPSPSSRNELCSM-TVKKISSNICQLRLDLEQFDTVGPDLMT----GTCRADSFSVSGQDINSIVPVLCGKNSGQHVYVEVGSSSGP 196
BLAST of conserved hypothetical protein vs. nr
Match: gi|1325311645|ref|XP_023337449.1| (uncharacterized protein LOC111708347 [Eurytemora affinis]) HSP 1 Score: 101.679 bits (252), Expect = 1.909e-21 Identity = 64/151 (42.38%), Postives = 81/151 (53.64%), Query Frame = 0 Query: 73 FSLFNVVTFDNAQCTSNDVTNGEARLGTCFTTSECVARNGQLRGTCAAGFGTCCVFVVQATGGQVNQNCTYLLDPTVDRA-NAGDARTIMYTVNRINSNICSLRLDLDTFNIQGPAVTTVTSLGPCVDQFTIQSKTGLT--TICGQNSGEH 220 SL +VV F N +CT++ G GTC +TSEC +R+G GTCAAGFG CC V G + N TY+ +P + T MYT+N++NS++C LRLD TF G AVTT G D +TG TI G NSG H Sbjct: 77 LSLLSVVNFPNLRCTTSAA--GATTYGTCISTSECTSRSGSASGTCAAGFGVCCYMAVSVCGSSLAYNNTYIQNPGYPSSFTPTTTGTCMYTINKVNSDVCQLRLDFQTFT--GFAVTTA---GVKTDSMAAAGQTGKNPPTISGTNSGYH 220
BLAST of conserved hypothetical protein vs. nr
Match: gi|1325334262|ref|XP_023348958.1| (uncharacterized protein LOC111717712 [Eurytemora affinis]) HSP 1 Score: 101.293 bits (251), Expect = 1.379e-20 Identity = 68/192 (35.42%), Postives = 97/192 (50.52%), Query Frame = 0 Query: 73 FSLFNVVTFDNAQCTSNDVTNGEARLGTCFTTSECVARNGQLRGTCAAGFGTCCVFVVQATGGQVNQNCTYLLDPTVDRANAGDAR-TIMYTVNRINSNICSLRLDLDTFNIQGPAVTTVTSLGPCVDQFTIQSKTGLT--TICGQNSGEHTPLATTQDRNPARRSQPAPPTFDHILHAEADQLDAFEERVD 261 SLF +V F N +C +++ +G GTC +TSEC +R+G GTCAAGFG CC V G VN N TY+ +P A T +YT+N+ ++++C LRLD TF+ G +VTT G D I +TG +I G N+G H + D A T A A Q + F ++++ Sbjct: 43 LSLFAIVNFPNLRCVTSN--SGSTLYGTCISTSECTSRSGSAAGTCAAGFGVCCYLAVSTCGSTVNYNNTYIQNPGYPSTYTPTATGTCLYTINKASTDVCQLRLDFQTFS--GFSVTTA---GVKTDSMAITGQTGRNPPSISGTNTGYHMYVNLGADTG-----DTATVTMTWGSIASAKQYNIFVQQIE 222
BLAST of conserved hypothetical protein vs. nr
Match: gi|1241832303|gb|PBC28660.1| (Intraflagellar transport protein [Apis cerana cerana]) HSP 1 Score: 102.449 bits (254), Expect = 1.938e-20 Identity = 58/152 (38.16%), Postives = 78/152 (51.32%), Query Frame = 0 Query: 73 FSLFNVVTFDNAQCTSNDVTNGEARLGTCFTTSECVARNGQLRGTCAAGFGTCCVFVVQATGGQVNQNCTYLLDPTVDRANAGDARTIMYTVNRINSNICSLRLDLDTFNIQGPAVTTVTSLGPCVDQFTIQSKTG--LTTICGQNSGEHTP 222 F LF+V+ F N+QC +++ NG TCFT EC G GTCA G G CC+F + N N TY +P G R + TV R NSNIC LRLD F + P + G C +F + S +G + ICG+N+ +H+P Sbjct: 1534 FPLFSVIRFANSQCLASNNLNG-----TCFTRRECRDYGGVPSGTCANGHGICCIF-QKTCSSTTNVNNTYFTNPEYPTTYEGQGRCTI-TVQRCNSNICQLRLDFLEFTLASPNAS-----GICDFEFILVSGSGSIVPRICGENANQHSP 1673
BLAST of conserved hypothetical protein vs. nr
Match: gi|1325295830|ref|XP_023330808.1| (uncharacterized protein LOC111703166 [Eurytemora affinis]) HSP 1 Score: 100.523 bits (249), Expect = 2.252e-20 Identity = 60/162 (37.04%), Postives = 87/162 (53.70%), Query Frame = 0 Query: 72 VFSLFNVVTFDNAQCTSNDVTNGEARLGTCFTTSECVARNGQLRGTCAAGFGTCCVFVVQATGGQVNQNCTYLLDPTVDRANAGDARTIMYTVNRINSNICSLRLDLDTF------NIQGPAVTTVTSLGPCVDQFTIQSKTGLT--TICGQNSGEHTPLAT 225 + SLF++V F N +C S + +GTC+ TSEC ++ G G+CAAGFG CC+F A V N +Y+ +P + A T YT+N+++S+IC LRLD T QG +T+ + G D T+ KTG ICG N+G+H + T Sbjct: 40 ILSLFSIVNFPNLECNS---LSASFAIGTCYATSECESKGGTTSGSCAAGFGVCCLFSKSACSSTVTNNVSYITNPGFP-STYNTAGTCTYTINKVSSDICQLRLDFITLVQAVSTMPQGCCGSTLCTAGFLADSLTVLGKTGKNPPVICGTNTGQHMYVET 197
BLAST of conserved hypothetical protein vs. nr
Match: gi|1325273897|ref|XP_023321599.1| (uncharacterized protein LOC111696274 [Eurytemora affinis]) HSP 1 Score: 99.7525 bits (247), Expect = 3.491e-20 Identity = 68/167 (40.72%), Postives = 89/167 (53.29%), Query Frame = 0 Query: 72 VFSLFNVVTFDNAQCTSNDVTNGEARLGTCFTTSECVARNGQLRGTCAAGFGTCCVFVVQATGGQVNQNCTYLLDPTVDRANAGDARTIMYTVNRINSNICSLRLDLDTF------NIQG-----PAVTTVTSLGPCVDQFTIQSKTGLT--TICGQNSGEHTPLAT 225 V SLF+VV F N +C N +++ AR GTC +SEC ++ G GTCAAGFG CC+F A V+ N +Y+ +P + A T YTVN+I+S+IC LRLD T N QG P T + D T+ KTG ICG N+GEH + T Sbjct: 44 VLSLFSVVNFPNLEC--NSLSSSFAR-GTCLASSECQSKGGTTSGTCAAGFGVCCLFTTSACSSTVSNNVSYITNPGFP-STYNTAGTCTYTVNKISSDICQLRLDFITLVQSVSTNPQGCCGAAPTCTIAS------DSLTVLGKTGKNPPVICGTNTGEHMYVET 200
BLAST of conserved hypothetical protein vs. nr
Match: gi|1325334812|ref|XP_023349222.1| (uncharacterized protein LOC111717988 isoform X1 [Eurytemora affinis]) HSP 1 Score: 99.3673 bits (246), Expect = 5.533e-20 Identity = 70/192 (36.46%), Postives = 95/192 (49.48%), Query Frame = 0 Query: 73 FSLFNVVTFDNAQCTSNDVTNGEARLGTCFTTSECVARNGQLRGTCAAGFGTCCVFVVQATGGQVNQNCTYLLDP-TVDRANAGDARTIMYTVNRINSNICSLRLDLDTFNIQGPAVTTVTSLGPCVDQFTIQSKTGLT--TICGQNSGEHTPLATTQDRNPARRSQPAPPTFDHILHAEADQLDAFEERVD 261 SLF VV F N +CT+ G GTC +TSEC +R+G GTCAAGFG CC V G ++ N TY+ +P T +YTVN+ +S++C LRLD TF+ G A VTS+G D +TG TI G N+G H + D + A T A A Q + F ++++ Sbjct: 53 LSLFAVVNFPNLKCTTK---TGSTTYGTCISTSECTSRSGSASGTCAAGFGVCCYMAVSTCGSSLSYNNTYIQNPGYPSTYTPTTTGTCVYTVNKASSDVCQLRLDFQTFS--GFA---VTSVGAKTDSMAAAGQTGKNPPTISGTNTGYHMYVNVGAD-----STDTATLTMTWGDIATAKQYNIFVQQIE 231
BLAST of conserved hypothetical protein vs. nr
Match: gi|1325334814|ref|XP_023349224.1| (uncharacterized protein LOC111717988 isoform X2 [Eurytemora affinis]) HSP 1 Score: 99.3673 bits (246), Expect = 5.726e-20 Identity = 63/151 (41.72%), Postives = 81/151 (53.64%), Query Frame = 0 Query: 73 FSLFNVVTFDNAQCTSNDVTNGEARLGTCFTTSECVARNGQLRGTCAAGFGTCCVFVVQATGGQVNQNCTYLLDP-TVDRANAGDARTIMYTVNRINSNICSLRLDLDTFNIQGPAVTTVTSLGPCVDQFTIQSKTGLT--TICGQNSGEH 220 SLF VV F N +CT+ G GTC +TSEC +R+G GTCAAGFG CC V G ++ N TY+ +P T +YTVN+ +S++C LRLD TF+ G A VTS+G D +TG TI G N+G H Sbjct: 35 LSLFAVVNFPNLKCTTK---TGSTTYGTCISTSECTSRSGSASGTCAAGFGVCCYMAVSTCGSSLSYNNTYIQNPGYPSTYTPTTTGTCVYTVNKASSDVCQLRLDFQTFS--GFA---VTSVGAKTDSMAAAGQTGKNPPTISGTNTGYH 177
BLAST of conserved hypothetical protein vs. nr
Match: gi|242023955|ref|XP_002432396.1| (conserved hypothetical protein [Pediculus humanus corporis] >gi|212517819|gb|EEB19658.1| conserved hypothetical protein [Pediculus humanus corporis]) HSP 1 Score: 98.9821 bits (245), Expect = 8.612e-20 Identity = 68/198 (34.34%), Postives = 99/198 (50.00%), Query Frame = 0 Query: 60 RLQMVSPEVRCVVFSLFNVVTFDNAQCTSNDVTNGEARLGTCFTTSECVARNGQLRGTCAAGFGTCCVFVVQATGGQ-VNQNCTYLLDPTVDRANAGDARTIMYTVNRINSNICSLRLDLDTFNIQGPA-VTTVTSLGPCVDQFTIQSKTGLTTICGQNSGEHTPL-ATTQDRNPARRS-QPAPPTFDHILHAEADQL 253 L + + C++ SLF VV F N C ++ NG TC T++EC R G G CA GFG CCVF+ AT GQ +NC+Y + P ++ G + TV++ + NIC RLD D FNI GP + + + DQF + + ICG N+G H + A + NP + + P+FD + Q+ Sbjct: 52 ELVLFQNQNGCLLLSLFTVVEFQNQGCGASSGDNG-----TCLTSAECEERGGVSSGPCARGFGICCVFL--ATCGQDTKENCSYFVSPNFPQSYDGTG-SCQLTVHKSHPNICQFRLDFDQFNIAGPEPINNICN----NDQFIVSGGNTVPGICGMNNGNHMYIDAGSGITNPVTLTFVTSGPSFDRTWKVKICQI 237 The following BLAST results are available for this feature:
BLAST of conserved hypothetical protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of conserved hypothetical protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of conserved hypothetical protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1061_size65987:30364..52118- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1061_size65987-snap-gene-0.8 ID=maker-scaffold1061_size65987-snap-gene-0.8|Name=conserved hypothetical protein|organism=Tigriopus kingsejongensis|type=gene|length=21755bp|location=Sequence derived from alignment at scaffold1061_size65987:30364..52118- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'conserved hypothetical protein' has the following synonyms
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