dna-binding protein rfx7, maker-scaffold1062_size65571-snap-gene-0.13 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of dna-binding protein rfx7 vs. L. salmonis genes
Match: EMLSAG00000002742 (supercontig:LSalAtl2s:LSalAtl2s158:75789:89069:-1 gene:EMLSAG00000002742 transcript:EMLSAT00000002742 description:"maker-LSalAtl2s158-snap-gene-1.15") HSP 1 Score: 244.202 bits (622), Expect = 2.728e-74 Identity = 122/197 (61.93%), Postives = 144/197 (73.10%), Query Frame = 0 Query: 105 LSPAARNKVFGIVTTIEELSKVERLLVYLKLPATQHV--SNPLRQAINPLGSRSEIQTTITWIRTHLEEDTQVSLPKHEVYDEYMEYCHDNDVKALSTADFGKVMKQVYPLVRPRRLGTRGNSRYCYAGLKKRVKLEEPTTPDNVQITSNMLVKATDAKEENGPARIVLEWVEKLFNEKFGNIHALAAYLVDKMHVD 299 LS ++ KV I+ +E+LSK +RLL YL+LP+ Q ++PLR +NPLGSRSEIQ TITWI+THLEED QVSLPKHEVYDEY+EYC N +K LSTADFGKVMKQVYP VRPRRLGTRGNSRYCYAGLKK+ KLEEP TPD V T+ + ++ EWVEKL KF + LA YL+DKM+VD Sbjct: 26 LSSDSKRKVETIIQEVEKLSKFDRLLFYLELPSNQSNAPTDPLRGPLNPLGSRSEIQLTITWIKTHLEEDQQVSLPKHEVYDEYIEYCTTNLLKPLSTADFGKVMKQVYPQVRPRRLGTRGNSRYCYAGLKKKTKLEEPATPDFNFRKQEQTVSDTEDSVLVSASYLIREWVEKLLGVKFEGLKELAYYLLDKMYVD 222
BLAST of dna-binding protein rfx7 vs. L. salmonis genes
Match: EMLSAG00000003044 (supercontig:LSalAtl2s:LSalAtl2s172:193241:196853:-1 gene:EMLSAG00000003044 transcript:EMLSAT00000003044 description:"maker-LSalAtl2s172-snap-gene-2.19") HSP 1 Score: 68.1662 bits (165), Expect = 3.682e-12 Identity = 28/77 (36.36%), Postives = 50/77 (64.94%), Query Frame = 0 Query: 161 TITWIRTHLEEDTQVSLPKHEVYDEYMEYCHDNDVKALSTADFGKVMKQVYPLVRPRRLGTRGNSRYCYAGLKKRVK 237 TI W+ + E VS+P+ +Y Y ++C ++ + ++ A FGK+++ V+ +R RR+GTRGNS+Y Y G++ + K Sbjct: 214 TIEWLVLNYETSEGVSIPRSTLYQHYQDHCRESQQEPVNAASFGKLIRSVFLGLRTRRIGTRGNSKYHYYGIRVKSK 290
BLAST of dna-binding protein rfx7 vs. SwissProt
Match: gi|121946796|sp|Q2KHR2.1|RFX7_HUMAN (RecName: Full=DNA-binding protein RFX7; AltName: Full=Regulatory factor X 7; AltName: Full=Regulatory factor X domain-containing protein 2) HSP 1 Score: 127.872 bits (320), Expect = 2.956e-29 Identity = 61/154 (39.61%), Postives = 91/154 (59.09%), Query Frame = 0 Query: 154 SRSEIQTTITWIRTHLEEDTQVSLPKHEVYDEYMEYCHDNDVKALSTADFGKVMKQVYPLVRPRRLGTRGNSRYCYAGLKKRVKLEEPTTPD-NVQITSNML--------VKATDAKEENGPARIVLEWVEKLFNEKFGNIHALAAYLVDKMHV 298 SR++ +WIR LEE + SLPK EVYDEY YC + LS ADFGK+MK V+P ++ RRLGTRG S+YCY+GL+K+ + PT P+ + T + L ++ D + + R+V EW +K+ ++ F + LA +LV ++ Sbjct: 4 SRAQQMHAFSWIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRGKSKYCYSGLRKKAFVHMPTLPNLDFHKTGDGLEGAEPSGQLQNIDEEVISSACRLVCEWAQKVLSQPFDTVLELARFLVKSHYI 157
BLAST of dna-binding protein rfx7 vs. SwissProt
Match: gi|408407922|sp|Q9JL61.2|RFX5_MOUSE (RecName: Full=DNA-binding protein Rfx5; AltName: Full=Regulatory factor X 5) HSP 1 Score: 123.25 bits (308), Expect = 3.792e-28 Identity = 69/217 (31.80%), Postives = 116/217 (53.46%), Query Frame = 0 Query: 96 SIHQILVETLSPAARNKVFGIVTTIEELSKVERLLVYLKLPATQHVSNPLRQAINPLGSRSEIQTTITWIRTHLEEDTQVSLPKHEVYDEYMEYCHD-NDVKALSTADFGKVMKQVYPLVRPRRLGTRGNSRYCYAGLKKRVKLEEPTTPDNVQITSNMLVKATDAKE---ENGPA----------RIVLEWVEKLFNEKFGNIHALAAYLVDKMHV 298 ++ Q L T+S A +NKV GI+ +++ S ++L +YL+LP+ V + + L S E WIR HLEE LPK VYD Y +YC + LSTA+FGK++++++P ++ RRLG RG S+YCY+G++++ + P P + +K +++ E E PA + +W E++ F +I +A YL+ + + Sbjct: 28 TLLQRLRGTISKAVQNKVEGILQEVQKFSDNDKLYLYLQLPSGPSVGE--KSSEPSLLSNEEYMYAYRWIRNHLEEHMDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLP-------GLDLKGSESPEMGPEVSPAPRDELVEAACALTCDWAERILKRSFSSIVQVARYLLQQHLI 235
BLAST of dna-binding protein rfx7 vs. SwissProt
Match: gi|1350587|sp|P48382.1|RFX5_HUMAN (RecName: Full=DNA-binding protein RFX5; AltName: Full=Regulatory factor X 5) HSP 1 Score: 122.094 bits (305), Expect = 7.821e-28 Identity = 65/208 (31.25%), Postives = 113/208 (54.33%), Query Frame = 0 Query: 96 SIHQILVETLSPAARNKVFGIVTTIEELSKVERLLVYLKLPATQHVSNPLRQAINPLGSRSEIQTTITWIRTHLEEDTQVSLPKHEVYDEYMEYCHD-NDVKALSTADFGKVMKQVYPLVRPRRLGTRGNSRYCYAGLKKRVKLEEPTTP-------DNVQITSNMLVKATDAKEENGPARIVLEWVEKLFNEKFGNIHALAAYLVDK 295 ++ Q L T+S A +NKV GI+ +++ S ++L +YL+LP+ + + + S E WIR HLEE T LPK VYD Y +YC + LSTA+FGK++++++P ++ RRLG RG S+YCY+G++++ + P P ++ ++ + D E A + +W E++ F +I +A +L+ + Sbjct: 29 TLLQRLRGTISKAVQNKVEGILQDVQKFSDNDKLYLYLQLPSGPTTGD--KSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDLKGSESPEMGPEVTPAPRDELVEAACA-LTCDWAERILKRSFSSIVEVARFLLQQ 233
BLAST of dna-binding protein rfx7 vs. SwissProt
Match: gi|75075377|sp|Q4R3I8.1|RFX3_MACFA (RecName: Full=Transcription factor RFX3; AltName: Full=Regulatory factor X 3) HSP 1 Score: 72.0182 bits (175), Expect = 8.233e-12 Identity = 32/86 (37.21%), Postives = 55/86 (63.95%), Query Frame = 0 Query: 156 SEIQTTITWIRTHLEEDTQVSLPKHEVYDEYMEYCHDNDVKALSTADFGKVMKQVYPLVRPRRLGTRGNSRYCYAGLKKRVKLEEP 241 S + + + W+ + E VSLP+ +YD Y+ +C ++ + ++ A FGK+++ ++ +R RRLGTRGNS+Y Y G+ RVK + P Sbjct: 178 SLLNSHLQWLLDNYETAEGVSLPRSTLYDHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGI--RVKPDSP 261
BLAST of dna-binding protein rfx7 vs. SwissProt
Match: gi|254797631|sp|B2GV50.1|RFX2_RAT (RecName: Full=DNA-binding protein RFX2; AltName: Full=Regulatory factor X 2) HSP 1 Score: 71.2478 bits (173), Expect = 1.174e-11 Identity = 31/81 (38.27%), Postives = 54/81 (66.67%), Query Frame = 0 Query: 161 TITWIRTHLEEDTQVSLPKHEVYDEYMEYCHDNDVKALSTADFGKVMKQVYPLVRPRRLGTRGNSRYCYAGLKKRVKLEEP 241 T+ W+ + E VSLP+ +Y+ Y+ +C ++ ++ ++ A FGK+++ V+ +R RRLGTRGNS+Y Y G+ R+K + P Sbjct: 169 TLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGI--RLKPDSP 247
BLAST of dna-binding protein rfx7 vs. SwissProt
Match: gi|6174972|sp|P48383.2|SAK1_SCHPO (RecName: Full=Protein sak1) HSP 1 Score: 71.2478 bits (173), Expect = 1.241e-11 Identity = 27/74 (36.49%), Postives = 50/74 (67.57%), Query Frame = 0 Query: 162 ITWIRTHLEEDTQVSLPKHEVYDEYMEYCHDNDVKALSTADFGKVMKQVYPLVRPRRLGTRGNSRYCYAGLKKR 235 I W++ EE ++ ++++Y Y+E C+ +K L++A FGK+++ ++P ++ RRLG RG+S+Y Y G+K R Sbjct: 102 ICWLKRACEEQQDAAVQRNQIYAHYVEICNSLHIKPLNSASFGKLVRLLFPSIKTRRLGMRGHSKYHYCGIKLR 175
BLAST of dna-binding protein rfx7 vs. SwissProt
Match: gi|254797632|sp|B1WAV2.1|RFX2_XENTR (RecName: Full=DNA-binding protein RFX2; AltName: Full=Regulatory factor X 2) HSP 1 Score: 71.2478 bits (173), Expect = 1.411e-11 Identity = 32/86 (37.21%), Postives = 55/86 (63.95%), Query Frame = 0 Query: 156 SEIQTTITWIRTHLEEDTQVSLPKHEVYDEYMEYCHDNDVKALSTADFGKVMKQVYPLVRPRRLGTRGNSRYCYAGLKKRVKLEEP 241 S + + + W+ + E VSLP+ +Y+ Y+ +C D+ + ++ A FGK+++ V+ +R RRLGTRGNS+Y Y G+ R+K + P Sbjct: 169 SLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQDHKLDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGI--RLKPDSP 252
BLAST of dna-binding protein rfx7 vs. SwissProt
Match: gi|123916375|sp|Q32NR3.1|RFX2_XENLA (RecName: Full=DNA-binding protein RFX2; AltName: Full=Regulatory factor X 2) HSP 1 Score: 70.8626 bits (172), Expect = 1.435e-11 Identity = 32/86 (37.21%), Postives = 55/86 (63.95%), Query Frame = 0 Query: 156 SEIQTTITWIRTHLEEDTQVSLPKHEVYDEYMEYCHDNDVKALSTADFGKVMKQVYPLVRPRRLGTRGNSRYCYAGLKKRVKLEEP 241 S + + + W+ + E VSLP+ +Y+ Y+ +C D+ + ++ A FGK+++ V+ +R RRLGTRGNS+Y Y G+ R+K + P Sbjct: 169 SLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQDHKLDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGI--RLKPDSP 252
BLAST of dna-binding protein rfx7 vs. SwissProt
Match: gi|288558824|sp|P22670.2|RFX1_HUMAN (RecName: Full=MHC class II regulatory factor RFX1; AltName: Full=Enhancer factor C; Short=EF-C; AltName: Full=Regulatory factor X 1; Short=RFX; AltName: Full=Transcription factor RFX1) HSP 1 Score: 71.2478 bits (173), Expect = 1.460e-11 Identity = 32/81 (39.51%), Postives = 51/81 (62.96%), Query Frame = 0 Query: 161 TITWIRTHLEEDTQVSLPKHEVYDEYMEYCHDNDVKALSTADFGKVMKQVYPLVRPRRLGTRGNSRYCYAGLKKRVKLEEP 241 T+ W+ + E VSLP+ +Y Y+ +C + ++ ++ A FGK+++ V+ +R RRLGTRGNS+Y Y GL R+K P Sbjct: 438 TVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGL--RIKASSP 516
BLAST of dna-binding protein rfx7 vs. SwissProt
Match: gi|292630951|sp|Q0V9K5.2|RFX3_XENTR (RecName: Full=Transcription factor RFX3; AltName: Full=Regulatory factor X 3) HSP 1 Score: 70.8626 bits (172), Expect = 1.838e-11 Identity = 37/108 (34.26%), Postives = 64/108 (59.26%), Query Frame = 0 Query: 136 PATQHVSNPLRQAINPLGSR--SEIQTTITWIRTHLEEDTQVSLPKHEVYDEYMEYCHDNDVKALSTADFGKVMKQVYPLVRPRRLGTRGNSRYCYAGLKKRVKLEEP 241 PAT ++ Q + L S S + + + W+ + E VSLP+ +Y+ Y+ +C ++ + ++ A FGK+++ ++ +R RRLGTRGNS+Y Y G+ RVK + P Sbjct: 156 PATIEMAIETLQKSDGLSSHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGI--RVKPDSP 261
BLAST of dna-binding protein rfx7 vs. nr
Match: gi|1209688503|gb|OWR43855.1| (hypothetical protein KGM_208661 [Danaus plexippus plexippus]) HSP 1 Score: 213.001 bits (541), Expect = 7.447e-55 Identity = 105/203 (51.72%), Postives = 139/203 (68.47%), Query Frame = 0 Query: 94 LESIHQILVETLSPAARNKVFGIVTTIEELSKVERLLVYLKLPATQHVSNPLRQAINPLGSRSEIQTTITWIRTHLEEDTQVSLPKHEVYDEYMEYCHDNDVKALSTADFGKVMKQVYPLVRPRRLGTRGNSRYCYAGLKKRVKLEEPTTPDNVQITSNMLVKATDAKEENGPARIVLEWVEKLFNEKFGNIHALAAYLVDKM 296 + S+ QI+ TLS R +V ++ +E LS ERLL+YL+LP +PL+Q +NPLGSR+E+Q T+TWI+THLE D VSLPK +VYDEY+ +C +++K LSTADFGKVMKQVYP VRPRRLGTRGNSRYCYAGL+K+VKLE P P+ + T V + + + RI+ +W E KF NI L+ +L+ M Sbjct: 84 IASMQQIVENTLSQEGRQRVSQLLEAVEGLSGAERLLLYLRLPTGVPPHDPLKQPVNPLGSRAELQQTVTWIQTHLEVDPDVSLPKQDVYDEYIAHCMTSNMKPLSTADFGKVMKQVYPSVRPRRLGTRGNSRYCYAGLRKKVKLEVPQLPNLGESTKEPSVPSRENE------RIICDWAESKLGVKFMNISELSRHLLSAM 280
BLAST of dna-binding protein rfx7 vs. nr
Match: gi|909577312|ref|XP_013144469.1| (PREDICTED: uncharacterized protein LOC106107975 [Papilio polytes]) HSP 1 Score: 212.231 bits (539), Expect = 1.600e-54 Identity = 106/200 (53.00%), Postives = 136/200 (68.00%), Query Frame = 0 Query: 94 LESIHQILVETLSPAARNKVFGIVTTIEELSKVERLLVYLKLPATQHVSNPLRQAINPLGSRSEIQTTITWIRTHLEEDTQVSLPKHEVYDEYMEYCHDNDVKALSTADFGKVMKQVYPLVRPRRLGTRGNSRYCYAGLKKRVKLEEPTTPDNVQITSNMLVKATDAKEENGPARIVLEWVEKLFNEKFGNIHALAAYLV 293 + S+ QI+ TLS R +V ++ +E LS ERLL+YL+LP +PL+Q INPLGSR+E+Q T+TWI+THLE D VSLPK +VYDEY+ +C +++K LSTADFGKVMKQVYP VRPRRLGTRGNSRYCYAGL+K++KLE P P + + T A E R+V EW E KFG+I L+ +L Sbjct: 84 ITSMQQIVENTLSQEGRQRVTQLLEAVEALSGAERLLLYLRLPTGVPPHDPLKQPINPLGSRAELQQTVTWIQTHLEVDPDVSLPKQDVYDEYIAHCMSSNMKPLSTADFGKVMKQVYPSVRPRRLGTRGNSRYCYAGLRKKIKLEVPQLP----VLGESSKEPTVAPRET--ERVVCEWAESKLGIKFGSIGELSRHLA 277
BLAST of dna-binding protein rfx7 vs. nr
Match: gi|1285000959|ref|XP_023012220.1| (DNA-binding protein RFX7 [Leptinotarsa decemlineata]) HSP 1 Score: 197.208 bits (500), Expect = 4.599e-54 Identity = 98/191 (51.31%), Postives = 126/191 (65.97%), Query Frame = 0 Query: 104 TLSPAARNKVFGIVTTIEELSKVERLLVYLKLPA-TQHVSNPLRQAINPLGSRSEIQTTITWIRTHLEEDTQVSLPKHEVYDEYMEYCHDNDVKALSTADFGKVMKQVYPLVRPRRLGTRGNSRYCYAGLKKRVKLEEPTTPDNVQITSNMLVKATDAKEENGPARIVLEWVEKLFNEKFGNIHALAAYLV 293 T+S A+ + I+ I LS+VE+ L++LKLP + +P RQ +NPLGSRSEI TI+WI+THLEED SLPK EVY++Y YC N +K LS ADFGKVMKQVYP VR RRLGTRGNSRYCY+GL++ +KL+ P PD + T + IV EW E+ N+KF +I ALA +L+ Sbjct: 65 TISETAKQTIHTILELINPLSQVEKFLLFLKLPGEVTNAVDPFRQTLNPLGSRSEIYRTISWIKTHLEEDPDTSLPKQEVYNDYHNYCVTNTIKPLSQADFGKVMKQVYPKVRARRLGTRGNSRYCYSGLRRCMKLKTPKLPDLADKPMSTEAPFTQTSLTSAAWLIVKEWSEQQLNQKFDSIQALAYHLI 255
BLAST of dna-binding protein rfx7 vs. nr
Match: gi|1229725897|ref|XP_022125696.1| (uncharacterized protein LOC111000539 [Pieris rapae]) HSP 1 Score: 209.149 bits (531), Expect = 1.243e-53 Identity = 100/199 (50.25%), Postives = 137/199 (68.84%), Query Frame = 0 Query: 94 LESIHQILVETLSPAARNKVFGIVTTIEELSKVERLLVYLKLPATQHVSNPLRQAINPLGSRSEIQTTITWIRTHLEEDTQVSLPKHEVYDEYMEYCHDNDVKALSTADFGKVMKQVYPLVRPRRLGTRGNSRYCYAGLKKRVKLEEPTTPDNVQITSNMLVKATDAKEENGPARIVLEWVEKLFNEKFGNIHALAAYL 292 + S+ QI+ T+S R +V ++ +E LS ERLL+YL+LP +PL+Q +NPLGSR+E+Q T+TWI+THLE D VSLPK +VYDEY+ +C +++K LSTADFGKVMKQVYP VRPRRLGTRGNSRYCYAGL+K+VKLE P PD + + + ++ + R++ EW E KF +I L+ ++ Sbjct: 84 IASMQQIVENTISQDGRQRVAQLLEAVEALSGAERLLLYLRLPTGVPPHDPLKQPVNPLGSRAELQQTVTWIQTHLEVDPDVSLPKQDVYDEYIAHCMSSNMKPLSTADFGKVMKQVYPTVRPRRLGTRGNSRYCYAGLRKKVKLEVPQLPDLGESSKEGHIGTSEHE------RVICEWAESKLGVKFSSITELSRHV 276
BLAST of dna-binding protein rfx7 vs. nr
Match: gi|817060333|ref|XP_012251717.1| (uncharacterized protein LOC105683587 [Athalia rosae]) HSP 1 Score: 209.149 bits (531), Expect = 1.301e-53 Identity = 108/214 (50.47%), Postives = 139/214 (64.95%), Query Frame = 0 Query: 90 PSPPLESIHQILVETLSPAARNKVFGIVTTIEELSKVERLLVYLKLPATQHVS----NPLRQAINPLGSRSEIQTTITWIRTHLEEDTQVSLPKHEVYDEYMEYCHDNDVKALSTADFGKVMKQVYPLVRPRRLGTRGNSRYCYAGLKKRVKLEEPTTPDNVQITSNMLVKATDAKEENGPARIVLEWVEKLFNEKFGNIHALAAYLVDKMHVD 299 P+ E I Q+L + +S ++ +V I +E+L E+LL+YLK PA+ S +PLRQ +NPLG+R EI TI WI+THLEED VSLPK EVYDEY +C N +K LSTADFGKVMKQVYP VRPRRLGTRGNSRYCYAG++K++KLE PT P V + + + ++ EW E L KF ++ ALA +LV+ VD Sbjct: 97 PADKHEKIRQMLEDAISDDSKCRVREIYLQVEQLRMEEKLLLYLKFPASLIKSGENVDPLRQPLNPLGNRYEIHQTIMWIKTHLEEDPDVSLPKQEVYDEYNMFCIKNSMKPLSTADFGKVMKQVYPRVRPRRLGTRGNSRYCYAGMRKKIKLEPPTLPPVVGDQPPEEEEDITEEMLGAASTLIREWAESLLGLKFLSLGALARHLVNNFCVD 310 The following BLAST results are available for this feature:
BLAST of dna-binding protein rfx7 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of dna-binding protein rfx7 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of dna-binding protein rfx7 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1062_size65571:13345..22644+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1062_size65571-snap-gene-0.13 ID=maker-scaffold1062_size65571-snap-gene-0.13|Name=dna-binding protein rfx7|organism=Tigriopus kingsejongensis|type=gene|length=9300bp|location=Sequence derived from alignment at scaffold1062_size65571:13345..22644+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'dna-binding protein rfx7' has the following synonyms
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