web family protein chloroplastic, maker-scaffold109_size355148-snap-gene-1.23 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of web family protein chloroplastic vs. L. salmonis genes
Match: EMLSAG00000012862 (supercontig:LSalAtl2s:LSalAtl2s97:2788690:2790627:-1 gene:EMLSAG00000012862 transcript:EMLSAT00000012862 description:"maker-LSalAtl2s97-snap-gene-28.33") HSP 1 Score: 76.6406 bits (187), Expect = 1.546e-14 Identity = 64/212 (30.19%), Postives = 106/212 (50.00%), Query Frame = 0 Query: 90 VRTLRSQNAALAASLNERLMENTELSNLILALRDENMALSLAMTELRAARAEGVRLDPEAVEAEHLRRLTEYLEPVKGLMNRVLDHTVAMSGELTQAMGLVSAPG-RRSRSVQNLIRKKTSSATPPFSVPKPSG-PHHRTGSSGSNVAHVSPRVGGHAIHKPQIEIQRLDMDDINRLQAQQRSRGAAAETHDEEPDGD-----DYEDEPLEP 294 V +++ N LA +LN+ + +L I++LR EN+ L + +++L+A E A E L YLEP+K + + L+ +VA+S E+ +A+ ++ P R RS ++S + FS K + P ++ + VSP V GH +HKP I+I++LDM N L +S+G + E D D + ED +EP Sbjct: 36 VSSMKKNNKLLARALNQSREKIRDLEQSIMSLRTENVELRVQISDLKAQVHE-------ASEGGK-NHLVNYLEPLKNIFHGALNQSVALSAEINRALTYINVPQVTRHRS--------SASLSNGFSSIKFAERPRNK-------IKKVSPMVSGHVVHKPDIKIKKLDM---NTLLGTAQSQGLRFSRGEPESDPDPTRILENEDVEIEP 221 The following BLAST results are available for this feature:
BLAST of web family protein chloroplastic vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of web family protein chloroplastic vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of web family protein chloroplastic vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold109_size355148:112158..115131+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold109_size355148-snap-gene-1.23 ID=maker-scaffold109_size355148-snap-gene-1.23|Name=web family protein chloroplastic|organism=Tigriopus kingsejongensis|type=gene|length=2974bp|location=Sequence derived from alignment at scaffold109_size355148:112158..115131+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'web family protein chloroplastic' has the following synonyms
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