scavenger receptor class b member 1, maker-scaffold10_size831480-snap-gene-1.12 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of scavenger receptor class b member 1 vs. L. salmonis genes
Match: EMLSAG00000005382 (supercontig:LSalAtl2s:LSalAtl2s28:642972:644719:-1 gene:EMLSAG00000005382 transcript:EMLSAT00000005382 description:"maker-LSalAtl2s28-augustus-gene-6.15") HSP 1 Score: 114.005 bits (284), Expect = 2.024e-28 Identity = 90/343 (26.24%), Postives = 152/343 (44.31%), Query Frame = 0 Query: 9 PPVPVYMKFMLFTVENSEDATKGEKIRFNIVGPYSYKEDRHKVNISEEFEDQNTLTYAQYKGYAFDQDTS----CET-----CKADDNVIMINAPLLGIISVFDEIPLLGDTLKDMLNKAITS-----DTFSDSLFLTDTVDKILFHGSNPGSVR-------WLFSVLAFVNETLNLDLS----------SILPPVLDQEKGFAVFNGRVNTTNNEAYKVNTGYADLSQYLEIEKWGPSIDVLYDDLTPAGWWKENGGWNGS-----NAANTLKGTDGQQVKPFVTEEDR--VWLYQTDICRVLY-AEFQEHKEVDGIPLLGFVVPKRALQANTKFNYGFCME 312 PP PVY+ + LF ++N+ + +GE VGPYSY+E K N+ E ++ L+Y +Y + FD+ + C+ C +D + +IN LL + D +P T+KD+ + I + ++ LF+T+ VDKIL+ G + S +L +L + E+L LD+ I+ P E FA F G+ T Y + G D ++ I ++ + L A W G + + + GTDG Q PF+ + + +W++ ++CR +Y E + GI + V KR + N+ +C E Sbjct: 56 PPAPVYLSYSLFHIKNTNEVIRGEPPVLLEVGPYSYRETMRKENLME--QNSRYLSYGKYTKFEFDETNTHKLKCKNRINTPCSKNDKITIINPVLLTLADKLDGLP---KTVKDICFEIINNGNEALGIKAEDLFITEEVDKILYTGFDSKSAAIFDKLDTFLMLLLEVIQESLELDIPIKAKDFENIIKIISPAQLSEGTFAFFKGKNATKLQNYYTIENGRFDKESFMNIVEFNGK-----NKLPEAXWPNVATSITGQLSSEGGSCHRIYGTDGTQFPPFLFNKKKFPLWMFVGELCRTIYVEFESEVEVEGGITAYRYGVGKRVFSMSNPENFCYCQE 388
BLAST of scavenger receptor class b member 1 vs. SwissProt
Match: gi|374253737|sp|E1JI63.1|SNMP2_DROME (RecName: Full=Sensory neuron membrane protein 2; Short=SNMP2Dmel) HSP 1 Score: 73.1738 bits (178), Expect = 4.246e-13 Identity = 74/327 (22.63%), Postives = 123/327 (37.61%), Query Frame = 0 Query: 10 PVPVYMKFMLFTVENSEDATKGEKIRFNIVGPYSYKEDRHKVNISEEFEDQNTLTYAQYKGYAFDQDTSCETCKADDNVIMINAPLLGIISVFD-EIPLLGDTLKDMLNKAITSD-------------------------------------------TFSD--SLFLTDTVDKILFHGSNPGSVRWLFSVLAFVNETLNLDLSSILPPVLDQEKGFAVFN--GRVNTTNNEAYKVNTGYADLSQYLEIEKWGPSIDVLYDDLTPAGWWKENGGWNGSNAANTLKGTDGQQVKPFVTEEDRVWLYQTDICRVLYAEFQEHKEVDGIP 288 P P+ K +F V NS+ +G +GPY YK+ R K + D + ++Y Q + FD S + DD ++ +N + + VF+ EI + + LN + F+D S+F++ +V + LF G VR+ + N S + ++ G F+ G N + +E Y+V+TG D + LEI+K DD W ++ N + GTD PF D ++++ DICR + +Q + GIP Sbjct: 55 PQPLNFKVYIFNVTNSDRIQQGAIPIVEEIGPYVYKQFRQK-KVKHFSRDGSKISYVQNVHFDFDAVASAPYTQ-DDRIVALNMHMNAFLQVFEREITDIFQGFANRLNSRLNQTPGVRVLKRLMERIRGKRKSVLQISENDPGLALLLVHLNANLKAVFNDPRSMFVSTSVREYLFDG-----VRFCINPQGIAKAICNQIKESGSKTIREKSDGSLAFSFFGHKNGSGHEVYEVHTGKGDPMRVLEIQKL--------DDSHNLQVWLNASSEGETSVCNQINGTDASAYPPFRQRGDSMYIFSADICRSVQLFYQTDIQYQGIP 366
BLAST of scavenger receptor class b member 1 vs. SwissProt
Match: gi|115982|sp|P16671.2|CD36_HUMAN (RecName: Full=Platelet glycoprotein 4; AltName: Full=Fatty acid translocase; Short=FAT; AltName: Full=Glycoprotein IIIb; Short=GPIIIB; AltName: Full=Leukocyte differentiation antigen CD36; AltName: Full=PAS IV; AltName: Full=PAS-4; AltName: Full=Platelet collagen receptor; AltName: Full=Platelet glycoprotein IV; Short=GPIV; AltName: Full=Thrombospondin receptor; AltName: CD_antigen=CD36) HSP 1 Score: 72.7886 bits (177), Expect = 4.624e-13 Identity = 73/305 (23.93%), Postives = 131/305 (42.95%), Query Frame = 0 Query: 13 VYMKFMLFTVENSEDAT-KGEKIRFNIVGPYSYK-EDRHKVNISEEFEDQNTLTYAQYKGYAFDQDTSCETCKADDNVIMINAPLLGIISVFDEIPLLGDTLKDMLNKAITSDTFSDSLFLTDTVDKILFHGSNPGSVRWLFSVLAFVNETLNLDLSSILP-PVLDQEKGFAVFNGRVNTTNNEAYKVNTGYADLSQYLEIEKWGPSIDVLYDDLTPAGWWKENGGWNGSNAANTLKGTDGQQVKPFVTEEDRVWLYQTDICRVLYAEFQEHKEVDGIPLLGFVVPKRALQANTKF--NYGFCME 312 VY +F +F V+N ++ I+ GPY+Y+ K N++++ ED NT+++ Q G F+ S T DN ++N + ++ + L ++NK+ S+F T+ ++L+ +P S++P PV F +N T + YKV G ++S+ I+ + ++ Y W+ + + + GTD PFV + + + +DICR +YA F+ + GIP+ FV+P +A + + NY FC E Sbjct: 61 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAED-NTVSFLQPNGAIFEPSLSVGT--EADNFTVLNLAVAAASHIYQN-QFVQMILNSLINKS------KSSMFQVRTLRELLWGYRDP--------------------FLSLVPYPVTTTVGLFYPYNN----TADGVYKVFNGKDNISKVAIIDTYKGKRNLSY--------WESH--------CDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAFASPVENPDNYCFCTE 315
BLAST of scavenger receptor class b member 1 vs. SwissProt
Match: gi|544584773|sp|Q17A88.2|SNMP1_AEDAE (RecName: Full=Sensory neuron membrane protein 1; Short=SNMP1Aaeg; AltName: Full=Scavenger receptor class B) HSP 1 Score: 68.9366 bits (167), Expect = 1.083e-11 Identity = 78/296 (26.35%), Postives = 126/296 (42.57%), Query Frame = 0 Query: 3 RSVEEIPPVPVYMKFMLFTVENSEDATKGEKIRFNIVGPYSYKEDRHKVNISEEFEDQNTLTYAQYKGYAFDQDTSCETCKADDNVIMINAPL-LGIISVFDE-----IPLLGDTLKDMLNKAITSDTFSDSLFLTDTVDKILFHGSNPGSVRWLFSVLAFVNETLNLDLSSILPPVLDQEKGFAVFNGRVNTTNNEAYKVNTGYADLSQYLEIEKWGPSIDVLYDDLTPAGWWKENGGWNGSNAANTLKGTDGQQVKPFVTEEDRVWLYQTDICRVLYAEFQEHKEVDGIPLLGF 292 R + E P P+ K LF V N + KG K R +GPY ++E + K + + ED +TLT+ + F D S D +I I PL LG + + +PL+ + ++N T FLT V +LF G FS A + L+ + P + F++F G N T+ + V G ++ + V ++D T E ++G + N GTD PF+T +D++W + +ICR + AE+ + G+P+ F Sbjct: 29 RGMFEKIPFPLDFKLYLFHVTNPDVVMKGGKPRVREIGPYFFEEWKEKYDTVDNEED-DTLTFTLKNTWIFRPDLSKPL--TGDEMITIPHPLILGALLMVQRDREAMMPLVSKGMDIIMNPLTTG-------FLTTRVMDLLFDGILIDCSSHEFSAKALCS---GLESEGAVMPFNETHFKFSMF-GLKNGTDAGRWVVYRGVKNIMDLGRV--------VSFNDET------EMDIYDG-DECNRYIGTDSTIFPPFLTTKDKLWAWSPEICRSIGAEYGGKSKYAGLPMSFF 295
BLAST of scavenger receptor class b member 1 vs. SwissProt
Match: gi|74868468|sp|Q9VDD3.2|SNMP1_DROME (RecName: Full=Sensory neuron membrane protein 1; Short=SNMP1Dmel) HSP 1 Score: 68.9366 bits (167), Expect = 1.190e-11 Identity = 70/315 (22.22%), Postives = 133/315 (42.22%), Query Frame = 0 Query: 10 PVPVYMKFMLFTVENSEDATKGEKIRFNIVGPYSYKEDRHKVNISEEFEDQNTLTYAQYKGYAFDQDTSCETCKADDNVIMINAPLLGIISVFDEIPLLGDTLKDMLNKAITSDTFSDS-LFLTDTVDKILFHGSNPGSVRWLFSVLAFVNETLNLDLSSILPPVLDQEKGFAVFNGRVNTTNNEAYKVNTGYADLSQYLEIEKWGPSIDVLYDDLTPAGWWKENGGWNGSNAANTLKGTDGQQVKPFVTEEDRVWLYQTDICRVLYAEFQEHKEVDGIPLLGFVVPKRALQANTKFNYGFCMEAEGDLLDWDAC 323 P P++ +F V N ++ ++G K R VGP+ + E + K ++ ++ ++T+++ + F+ S ++ ++ L G ISV E + ++++K + S F D+ FL + F G N FS A ++ ++Q F G+ N +++ + V G + + ++ K+ D D+ P G NT GTD P + +ED +W + D+CR L A +Q G+P + + + ++A+ K + FC + E D D C Sbjct: 55 PFPLHFYIYVFNVTNPDEVSEGAKPRLQEVGPFVFDEWKDKYDLEDDVV-EDTVSFTMRNTFIFNPKESLPLTGEEEIILPHPIMLPGGISVQRE----KAAMMELVSKGL-SIVFPDAKAFLKAKFMDLFFRGINVDCSSEEFSAKALCTVFYTGEIKQA--KQVNQTHFLFSFMGQANHSDSGRFTVCRGVKNNKKLGKVVKFA---DEPEQDIWPDG------------ECNTFVGTDSTVFAPGLKKEDGLWAFTPDLCRSLGAYYQHKSSYHGMPSMRYTLDLGDIRADEKL-HCFCEDPE----DLDTC 341
BLAST of scavenger receptor class b member 1 vs. SwissProt
Match: gi|332321722|sp|E0W3E3.1|SNMP1_PEDHC (RecName: Full=Sensory neuron membrane protein 1) HSP 1 Score: 68.5514 bits (166), Expect = 1.287e-11 Identity = 75/299 (25.08%), Postives = 123/299 (41.14%), Query Frame = 0 Query: 2 TRSVEEIPPVPVYMKFMLFTVENS-EDATKGEKIRFNIVGPYSYKEDRHKVNISEEFEDQNTLTYAQYKGYAFDQDTSCETCKADDNVIMINAPLLGIISVFDE-----IPLLGDTLKDMLNKAITSDTFSDSLFLTDTVDKILFHGSNPGSVRWLFSVLAFVNETLNLDLSSILPPVLDQEKGFAVFNGRVNTTNNEAYKVNTGYADLSQYLEIEKWGPSIDVLYDDLTPAGWWKENGGWNGSNAANTLKGTDGQQVKPFVTEEDRVWLYQTDICRVLYAEFQEHKEVDGIPLLGFVV 294 TR E P P+ K +F + N E +G+ +GPY YKE + K + + +E+ +++T+ K FD D+ VI+ N L+G+I+ + +P++ + + NK DS+FL V +LF G FS A V L + + L V F++ N + T ++ G D Y E+ K + A + W G N L+GTDG ++E +W + ++CR + A+F E GIP + V Sbjct: 45 TREFWEKIPFPIDFKIHIFNITNHVEVQNEGKIPNLQEIGPYYYKEWKEKSEMID-YENDDSITFFM-KNTWFDNKEKTLPLTGDEMVIIPNPILVGLITAAEREKKGVLPMINKAIPILFNKP-------DSVFLKIKVYDLLFGGIIFNCTTKDFSASA-VCAVLKKE-APFLETVSRSVFKFSILNQKNGTEEPLKLQIKRGIKD---YTEVGK-----------VIGANGKNKLTNWRG-RPCNNLEGTDGTIFPSDISEHQDIWSFNLELCRSIPAKFVRKSEYKGIPAFRYNV 317
BLAST of scavenger receptor class b member 1 vs. nr
Match: gi|1325335271|ref|XP_023349462.1| (lysosome membrane protein 2-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 165.622 bits (418), Expect = 2.802e-43 Identity = 105/338 (31.07%), Postives = 171/338 (50.59%), Query Frame = 0 Query: 5 VEEIPPVPVYMKFMLFTVENSEDATKGEKIRFNIVGPYSYKEDRHKVNISEEFEDQNTLTYAQYKGYAFDQDTSCETCKADDNVIMINAPLLGIISVFDEIPLLGDTLKDM--------------LNKAIT--SDTFSDSLFLTDTVDKILFHGSNPGSVRWLFSVLAFVNETLNLDLSSI--LPPV----LDQEKGFAVFNGRVNTTNNEAYKVNTGYADLSQYLEIEKWGPSIDVLYDDLTPAGWWKENGGWNGSNAA------NTLKGTDGQQVKPFVTEEDRVWLYQTDICRVLYAEFQEHKEVDGIPLLGFVVPKRALQANTKFNYGFCMEAE 314 +E +PVYMKF V N E+ GEK N VGP++Y+E R K ++ ++++Y Y Y D++ SC +C D + +IN L GI+++ ++ L GD D+ ++ AIT + D LF T+T +K++F G PG ++++ ++ + ET L + LPP+ + + FA F G+ T +N YK+N+G D+S+Y +I+++ +D L P WW +N + + L GTDG Q PFV+ ++ +WL+ +D+CR +Y F E ++DGI F V K L + N FC E Sbjct: 23 IEPTAQLPVYMKFTFLNVTNPEEIKDGEKPIVNEVGPFAYREVRRKDGVTIM---DDSISYGSYISYELDENESCPSCTEDTMITVINPALAGIVTLIED--LAGDIEIDLGYGPQTVASLILSIIDAAITERHGEYEDDLFTTETANKLIFEGYEPGVLKFVLYLVNAIEETPEEILFPVEDLPPIEIPDIIADGKFAFFKGKNGTADNGWYKINSGIYDISKYQKIQEYN-GLDRL-----PESWWGTLASTPSANRSGVTGYCHELVGTDGTQYPPFVSMDNDIWLFSSDLCRSIYLSFYEEHDMDGINTYQFRVKKEVLSFDNPDNACFCPNVE 349
BLAST of scavenger receptor class b member 1 vs. nr
Match: gi|1325335269|ref|XP_023349461.1| (lysosome membrane protein 2-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 164.851 bits (416), Expect = 7.874e-43 Identity = 105/338 (31.07%), Postives = 170/338 (50.30%), Query Frame = 0 Query: 5 VEEIPPVPVYMKFMLFTVENSEDATKGEKIRFNIVGPYSYKEDRHKVNISEEFEDQNTLTYAQYKGYAFDQDTSCETCKADDNVIMINAPLLGIISVFDEIPLLGDTLKDM--------------LNKAIT--SDTFSDSLFLTDTVDKILFHGSNPGSVRWLFSVLAFVNETLNLDLSSI--LPPV----LDQEKGFAVFNGRVNTTNNEAYKVNTGYADLSQYLEIEKWGPSIDVLYDDLTPAGWWKENGGWNGSNAANT------LKGTDGQQVKPFVTEEDRVWLYQTDICRVLYAEFQEHKEVDGIPLLGFVVPKRALQANTKFNYGFCMEAE 314 +E +PVYMKF V N E+ GEK N VGP++Y+E R K ++ ++++Y Y Y D++ SC +C D + +IN L GI+++ ++ L GD D+ ++ AIT + D LF T+T +K++F G PG ++++ ++ + ET L + LPP+ + + FA F G+ T +N YK+N+G D+S+Y +I+++ +D L P WW +N + L GTDG Q PFV+ ++ +WL+ +D+CR +Y F E ++DGI F V K L + N FC E Sbjct: 56 IEPTAQLPVYMKFTFLNVTNPEEIKDGEKPIVNEVGPFAYREVRRKDGVTIM---DDSISYGSYISYELDENESCPSCTEDTMITVINPALAGIVTLIED--LAGDIEIDLGYGPQTVASLILSIIDAAITERHGEYEDDLFTTETANKLIFEGYEPGVLKFVLYLVNAIEETPEEILFPVEDLPPIEIPDIIADGKFAFFKGKNGTADNGWYKINSGIYDISKYQKIQEYN-GLDRL-----PESWWGTLASTPSANRSGVTGYCHELVGTDGTQYPPFVSMDNDIWLFSSDLCRSIYLSFYEEHDMDGINTYQFRVKKEVLSFDNPDNACFCPNVE 382
BLAST of scavenger receptor class b member 1 vs. nr
Match: gi|1325327149|ref|XP_023345427.1| (scavenger receptor class B member 1-like [Eurytemora affinis]) HSP 1 Score: 142.895 bits (359), Expect = 3.672e-36 Identity = 100/318 (31.45%), Postives = 157/318 (49.37%), Query Frame = 0 Query: 10 PVPVYMKFMLFTVENSEDATKG-EKIRFNIVGPYSYKEDRHKVNISEEFEDQNTLTYAQYKGYAFDQDTSCETCKADDNVIMINAPLLGII--SVFDEIPLLGDTLKDMLNKAITSDTFSDSLFLTDTVDKILFHGSNPGSVRWLFSVLAFVNETLNLDLSSILPPVLDQEKGFAVFNGRVNTTNNEAYKVNTGYADLSQYLEIEKWGPSI--DVLYDDLTPAG---------------------WWKEN---GGWNGSNAANTLKGTDGQQVKPFV--TEEDRVWLYQTDICRVLYAEFQEHKEVDGIPLLGFVVPK 296 P M+F+ F V N + G E +F GPY+Y+E K N + E +T+ + QY+ + FD SCE C D V ++N PL+G + ++ L+ +L AI + S LFL D+VD ILF G N V+ L + N L + LPP + Q+ GFA+FN + TT+NE Y+V+ G + ++ EI WGP++ D L DL+ A WW G + N L+GT+G+Q PF+ ++ +W++ TD+CR + ++ E ++DGI L + +P+ Sbjct: 35 PWTARMRFIFFQVINPLEVVTGVEMAKFEERGPYTYREVLEKRN---QVEGDSTVQFEQYRHFEFDAAQSCEGCLKTDTVRILNQPLIGAVAGAMAQGGGLVSGIALGILAGAIQNTADSPDLFLVDSVDNILFAGVNNELVQELLT---------NSLLKNKLPPAI-QDNGFAIFNTKNATTHNECYEVDVG---VERHTEINLWGPTLAEDDLNPDLSEARTCPSVIAGEVFSCRSTKNFPYWWPYKDIEGNERVNTTCNLLRGTNGEQFPPFLDDRRDEPLWIFSTDLCRSMSLKYLEDHDIDGIRTLRYTLPQ 336
BLAST of scavenger receptor class b member 1 vs. nr
Match: gi|1061476033|gb|ODM93945.1| (Scavenger receptor class B member 1 [Orchesella cincta]) HSP 1 Score: 130.568 bits (327), Expect = 1.186e-30 Identity = 96/314 (30.57%), Postives = 154/314 (49.04%), Query Frame = 0 Query: 9 PPVPVYMKFMLFTVENSEDATKGEKIRFNIVGPYSYKEDRHKVNISEEFEDQNTLTYAQYKGYAFDQDTSCETCKADDNVIMINAPLL-GIISVFDEIPLLGDTLKDMLNKAITSDTFSDSLFLTDTVDKILFHGSNPGSVRWLFSVLAFVNETLNLDLSSILPPVLDQEKGFAVFNGRVNTTNNEAYKVNTGYADLSQYLEIEKWGPSIDVLYDDLTPAGWWKENGGWNGSNAANTLKGTDGQQVKPFVTEEDRVWLYQTDICRVLYAEFQEHKEVDGIPLLGFVVPKRAL---QANTKFNYGFC--MEAEGD 316 PPVP+++K LF V NSE+ +G + + VGPY ++E+R K+NI + ED +T+TY ++ Y F+Q S + K D +I+IN P + I + +E+P D+ +M+ + +SLF+ TV++ILF G W L + + L L VL+ G + N + Y V G +D SQ+ I K+ ++ Y W S+ N ++G+DG PFV + + L+ +D+CR LY + + + +GI F VP L + N + N+ FC ME E D Sbjct: 19 PPVPIHLKVYLFNVTNSEEVQRGFRPKLLEVGPYVFRENRTKINIHHD-EDTDTVTYKEHFTYHFEQQLSGD-LKLQDEIIIINTPYVAAAIKINNELPWPMDSFANMI-----LIQYKESLFIRRTVEEILFKG-------WTVPFLQQIETDIGLTL------VLNNTFGLLIGQ---NDSAQGPYTVARGVSDKSQFGTILKYKNESELSY--------------WPKSSQCNKIQGSDGTIFSPFVEKRTVLKLFNSDLCRSLYLSYNQSIDFEGIKGYRFTVPPSVLADPRENNE-NHCFCPNMEHEPD 294
BLAST of scavenger receptor class b member 1 vs. nr
Match: gi|830143853|ref|XP_012586609.1| (PREDICTED: scavenger receptor class B member 1 isoform X3 [Condylura cristata]) HSP 1 Score: 129.413 bits (324), Expect = 1.403e-30 Identity = 88/316 (27.85%), Postives = 150/316 (47.47%), Query Frame = 0 Query: 10 PVPVYMKFMLFTVENSEDATKGEKIRFNIVGPYSYKEDRHKVNISEEFEDQNTLTYAQYKGYAFDQDTSCETCKADDNVIMINAPLLGIISVFDEIPLLGDTLKDMLNKAITSDTFSDSLFLTDTVDKILFHGSNPGSVRWLFSVLAFVNETLNLDLSSILPPVLDQEKGFAVFNGRVNTTNNEAYKVNTGYADLSQYLEIEKWGPSIDVLYDDLTPAGWWKENGGWNGSNAANTLKGTDGQQVKPFVTEEDRVWLYQTDICRVLYAEFQEHKEVDGIPLLGFVVPKRALQANTKF--NYGFCMEAEGDLLDWDAC 323 PVP Y+ F++ N + +GEK GPY Y+E RHK+NI+ F D +T++Y +Y+ + F D SC + D ++M N ++G ++ + P+ +LK M+ +TS F + F+ TV G + W + N+ LN L+ P V+ + F +F +N +++ + V TG DLS+ +++KW + L+ +W+ S+ N + GT GQ PF+T E + Y + CR + ++E +GIP FV P + + N GFC + + + C Sbjct: 60 PVPFYLSVYFFSILNPKAVLQGEKPWVQERGPYVYREFRHKINIT--FNDNDTVSYREYRRFQFQHDKSCGS--ESDYIVMPNILVMGAAAMMENKPM---SLKVMMALMLTS--FGEHAFMNRTV----------GEIMW-----GYDNKFLNF-LNQYFPNVIPFKGKFGLF-AELNNSDSGLFTVFTGVKDLSRIHQVDKW--------NGLSKVNYWR-------SDQCNMINGTAGQMWAPFMTPESSLEFYSPEACRSMKLIYKESGMFEGIPTYRFVAPNTLFANGSVYPPNEGFCPCLQSGIQNVSTC 334
BLAST of scavenger receptor class b member 1 vs. nr
Match: gi|830143828|ref|XP_012586608.1| (PREDICTED: scavenger receptor class B member 1 isoform X1 [Condylura cristata]) HSP 1 Score: 129.028 bits (323), Expect = 7.196e-30 Identity = 88/316 (27.85%), Postives = 150/316 (47.47%), Query Frame = 0 Query: 10 PVPVYMKFMLFTVENSEDATKGEKIRFNIVGPYSYKEDRHKVNISEEFEDQNTLTYAQYKGYAFDQDTSCETCKADDNVIMINAPLLGIISVFDEIPLLGDTLKDMLNKAITSDTFSDSLFLTDTVDKILFHGSNPGSVRWLFSVLAFVNETLNLDLSSILPPVLDQEKGFAVFNGRVNTTNNEAYKVNTGYADLSQYLEIEKWGPSIDVLYDDLTPAGWWKENGGWNGSNAANTLKGTDGQQVKPFVTEEDRVWLYQTDICRVLYAEFQEHKEVDGIPLLGFVVPKRALQANTKF--NYGFCMEAEGDLLDWDAC 323 PVP Y+ F++ N + +GEK GPY Y+E RHK+NI+ F D +T++Y +Y+ + F D SC + D ++M N ++G ++ + P+ +LK M+ +TS F + F+ TV G + W + N+ LN L+ P V+ + F +F +N +++ + V TG DLS+ +++KW + L+ +W+ S+ N + GT GQ PF+T E + Y + CR + ++E +GIP FV P + + N GFC + + + C Sbjct: 60 PVPFYLSVYFFSILNPKAVLQGEKPWVQERGPYVYREFRHKINIT--FNDNDTVSYREYRRFQFQHDKSCGS--ESDYIVMPNILVMGAAAMMENKPM---SLKVMMALMLTS--FGEHAFMNRTV----------GEIMW-----GYDNKFLNF-LNQYFPNVIPFKGKFGLF-AELNNSDSGLFTVFTGVKDLSRIHQVDKW--------NGLSKVNYWR-------SDQCNMINGTAGQMWAPFMTPESSLEFYSPEACRSMKLIYKESGMFEGIPTYRFVAPNTLFANGSVYPPNEGFCPCLQSGIQNVSTC 334
BLAST of scavenger receptor class b member 1 vs. nr
Match: gi|507971368|ref|XP_004690688.1| (PREDICTED: scavenger receptor class B member 1 isoform X2 [Condylura cristata]) HSP 1 Score: 128.642 bits (322), Expect = 8.112e-30 Identity = 88/316 (27.85%), Postives = 150/316 (47.47%), Query Frame = 0 Query: 10 PVPVYMKFMLFTVENSEDATKGEKIRFNIVGPYSYKEDRHKVNISEEFEDQNTLTYAQYKGYAFDQDTSCETCKADDNVIMINAPLLGIISVFDEIPLLGDTLKDMLNKAITSDTFSDSLFLTDTVDKILFHGSNPGSVRWLFSVLAFVNETLNLDLSSILPPVLDQEKGFAVFNGRVNTTNNEAYKVNTGYADLSQYLEIEKWGPSIDVLYDDLTPAGWWKENGGWNGSNAANTLKGTDGQQVKPFVTEEDRVWLYQTDICRVLYAEFQEHKEVDGIPLLGFVVPKRALQANTKF--NYGFCMEAEGDLLDWDAC 323 PVP Y+ F++ N + +GEK GPY Y+E RHK+NI+ F D +T++Y +Y+ + F D SC + D ++M N ++G ++ + P+ +LK M+ +TS F + F+ TV G + W + N+ LN L+ P V+ + F +F +N +++ + V TG DLS+ +++KW + L+ +W+ S+ N + GT GQ PF+T E + Y + CR + ++E +GIP FV P + + N GFC + + + C Sbjct: 60 PVPFYLSVYFFSILNPKAVLQGEKPWVQERGPYVYREFRHKINIT--FNDNDTVSYREYRRFQFQHDKSCGS--ESDYIVMPNILVMGAAAMMENKPM---SLKVMMALMLTS--FGEHAFMNRTV----------GEIMW-----GYDNKFLNF-LNQYFPNVIPFKGKFGLF-AELNNSDSGLFTVFTGVKDLSRIHQVDKW--------NGLSKVNYWR-------SDQCNMINGTAGQMWAPFMTPESSLEFYSPEACRSMKLIYKESGMFEGIPTYRFVAPNTLFANGSVYPPNEGFCPCLQSGIQNVSTC 334
BLAST of scavenger receptor class b member 1 vs. nr
Match: gi|532033300|ref|XP_005359562.1| (PREDICTED: lysosome membrane protein 2 [Microtus ochrogaster]) HSP 1 Score: 127.872 bits (320), Expect = 1.300e-29 Identity = 97/317 (30.60%), Postives = 158/317 (49.84%), Query Frame = 0 Query: 7 EIPPVPVYMKFMLFTVENSEDATKGEKIRFNIVGPYSYKEDRHKVNISEEFEDQ-NTLTYAQYKGYAFDQDTSCETCKADDNVIMI---NAPLLGIISVFDEIPLLGDTLKDMLNKAITSDTFSDSLFLTDTVDKILFHGSNPGSVRWLFSVLAFVNETLNLDLSSILPPVLDQEKGFAVFNGRVNTTNNEAYKVNTGYADLSQYLEIEKWGPSIDVLYDDLTPAGWWKENGGWNGSNAANTLKGTDGQQVKPFVTEEDRVWLYQTDICRVLYAEFQEHKEVDGIPLLGFVVPKRALQANTKFNYGFCMEAEGDLLD 319 E PP+PVY +F F V N E+ +GE VGPY+Y+E R+K NI +F D T++ K Y F+++ S D NV +I N PLL ++ + ++PLL + ++ +L T+ LF+T +V ++L+ + +E L+L I P D F +F G+ N TN+ Y TG + +++I +W + T WW ++ N + GTDG P +T+++ ++++ +D CR +Y F + V+G+P + VPK L ANT N GFC+ EG+ +D Sbjct: 54 EKPPLPVYTQFYFFNVTNPEEILRGEIPILEEVGPYTYRELRNKANI--QFGDNGTTISAVSNKAYVFERNQSV----GDPNVDLIRTINIPLLTVVEL-AQLPLLKEIIEAVLK------TYQQKLFVTRSVHELLW---------------GYKDEILSL--VHIFRP--DISPNFGLFYGK-NGTNDGDYVFLTGEDNYLNFMKIVEW--------NGKTSLDWWT-------TDQCNMINGTDGDSFHPLITKDEVLFVFPSDFCRSVYITFSGFESVEGLPAFRYKVPKEIL-ANTSENAGFCI-PEGNCMD 320
BLAST of scavenger receptor class b member 1 vs. nr
Match: gi|507562500|ref|XP_004664939.1| (PREDICTED: lysosome membrane protein 2 isoform X1 [Jaculus jaculus]) HSP 1 Score: 126.331 bits (316), Expect = 5.350e-29 Identity = 93/315 (29.52%), Postives = 154/315 (48.89%), Query Frame = 0 Query: 7 EIPPVPVYMKFMLFTVENSEDATKGEKIRFNIVGPYSYKEDRHKVNISEEFEDQNTLTYAQYKGYAFDQDTSCETCKADDNVIM---INAPLLGIISVFDEIPLLGDTLKDMLNKAITSDTFSDSLFLTDTVDKILFHGSNPGSVRWLFSVLAFVNETLNLDLSSILPPVLDQEKGFAVFNGRVNTTNNEAYKVNTGYADLSQYLEIEKWGPSIDVLYDDLTPAGWWKENGGWNGSNAANTLKGTDGQQVKPFVTEEDRVWLYQTDICRVLYAEFQEHKEVDGIPLLGFVVPKRALQANTKFNYGFCMEAEGDLL 318 E PP+PVY +F F V N E+ +GE R VGPY+Y+E R K NI + E+ T++ KGY F+++ S D NV + IN P+L +I + +P L ++ ML + +LF+T TVD++L+ + +E L+ L + P D F +F G+ N TN+ Y TG + +I +W + T WW ++ N + GTDG P +++++ ++++ +D CR ++ F +++ V+G+P + +P L AN+ N GFC+ EG L Sbjct: 54 EKPPLPVYTQFYFFNVTNPEEILQGEIPRLEQVGPYTYRELRSKANI-QFGENGTTISAVSNKGYVFERNKSI----GDPNVDLIRTINIPVLTVIEL-AHLPFLKTIIQAMLK------AYKQTLFVTHTVDELLW---------------GYKDEILS--LIHVFRP--DISPTFGLFYGK-NGTNDGNYVFLTGEDSYLNFTKIVEW--------NGKTSLDWW-------ATDKCNMINGTDGDSFHPLISKDEVLYVFPSDFCRSVHITFSDYESVEGLPAFRYKLPAEIL-ANSSENAGFCL-PEGSCL 319
BLAST of scavenger receptor class b member 1 vs. nr
Match: gi|1246217128|ref|XP_022455053.1| (lysosome membrane protein 2 [Delphinapterus leucas]) HSP 1 Score: 125.946 bits (315), Expect = 5.908e-29 Identity = 91/303 (30.03%), Postives = 149/303 (49.17%), Query Frame = 0 Query: 9 PPVPVYMKFMLFTVENSEDATKGEKIRFNIVGPYSYKEDRHKVNISEEFEDQNTLTYAQYKGYAFDQDTSCETCKADDNVIMINAPLLGIISVFDEIPLLGDTLKDMLNKAITSDTFSDSLFLTDTVDKILFHGSNPGSVRWLFSVLAFVNETLNLDLSSILPPVLDQEKGFAVFNGRVNTTNNEAYKVNTGYADLSQYLEIEKWGPSIDVLYDDLTPAGWWKENGGWNGSNAANTLKGTDGQQVKPFVTEEDRVWLYQTDICRVLYAEFQEHKEVDGIPLLGFVVPKRALQANTKFNYGFCM 311 PP+PV+ +F F V N E+ +GE R VGPY+Y+E R+K +I +F D T++ K Y F++D S K D + +N P L + + ++P L + ++ +L + LF+T TVD++L+ + +E L+L +I P D F +F G+ N TN+ Y TG + + +I +W + T WW ++ N + GTDG P +T+++ ++++ +D CR +Y F + + V G+P L F VP L ANT N GFC+ Sbjct: 56 PPLPVHTQFYFFNVTNPEEVLRGETPRLEEVGPYTYRELRNKEDI--QFGDNGTISAVSSKAYVFERDKSVGDPKVD-LLRTLNIPALTAME-WAQLPFLHEFIEALLK------AYQQKLFVTHTVDELLW---------------GYKDEILSL--INIFKP--DISPYFGLFYGK-NGTNDGDYVFLTGEDNYLNFCKIVEW--------NGKTSLDWWT-------ADECNMINGTDGDSFHPLITKDEVLYVFPSDFCRSVYITFSDFESVQGLPALRFKVPAEIL-ANTSDNAGFCI 312 The following BLAST results are available for this feature:
BLAST of scavenger receptor class b member 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of scavenger receptor class b member 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of scavenger receptor class b member 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold10_size831480:168519..176717- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold10_size831480-snap-gene-1.12 ID=maker-scaffold10_size831480-snap-gene-1.12|Name=scavenger receptor class b member 1|organism=Tigriopus kingsejongensis|type=gene|length=8199bp|location=Sequence derived from alignment at scaffold10_size831480:168519..176717- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'scavenger receptor class b member 1' has the following synonyms
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