low-density lipoprotein receptor-related protein 6-like, maker-scaffold111_size354240-snap-gene-1.11 (gene) Tigriopus kingsejongensis

Overview


Name	low-density lipoprotein receptor-related protein 6-like
Unique Name	maker-scaffold111_size354240-snap-gene-1.11
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of low-density lipoprotein receptor-related protein 6-like vs. L. salmonis genes
Match: EMLSAG00000001761 (supercontig:LSalAtl2s:LSalAtl2s12:1804673:1851639:-1 gene:EMLSAG00000001761 transcript:EMLSAT00000001761 description:"maker-LSalAtl2s12-augustus-gene-18.18")

HSP 1 Score: 100.138 bits (248), Expect = 6.874e-26
Identity = 46/91 (50.55%), Postives = 60/91 (65.93%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVVQL--ENSAPYGLTLTKSHVYWTDWKNP 89
            MDG+DR TLVD+ +G PNS+ V+ E+Y+ CWTDGGS   P    + PKIEC+ ++GG SR  +  L  E   PYG+   K  +YWTDWK P
Sbjct: 1690 MDGTDRRTLVDTDLGMPNSITVNYEEYKFCWTDGGSTFPP----ISPKIECLGIHGGGSREVLTSLNSEKDLPYGICHNKDDIYWTDWKQP 1776

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BLAST of low-density lipoprotein receptor-related protein 6-like vs. L. salmonis genes
Match: EMLSAG00000004273 (supercontig:LSalAtl2s:LSalAtl2s224:244283:302537:1 gene:EMLSAG00000004273 transcript:EMLSAT00000004273 description:"maker-LSalAtl2s224-augustus-gene-3.16")

HSP 1 Score: 63.929 bits (154), Expect = 2.921e-13
Identity = 40/114 (35.09%), Postives = 58/114 (50.88%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVVQLENSAPYGLTLTKSHVYWTDWKNPNVHGAHKESG-ERLPSLPHVLDMMG 113
            MDG  R  LV   I  PN + +D E  ++ W D  +           KIE + +  G+ RR +V      P+GLT+   +VYWTDW+   +  AHK+SG ER   + H+  +MG
Sbjct:  503 MDGRHREILVSEGIVWPNGVTIDIEAQKLYWCDAKTD----------KIEVINV-DGTGRRVIVSEILPHPFGLTVLGDYVYWTDWREKTLERAHKDSGEEREILINHLKGLMG 605

HSP 2 Score: 45.8246 bits (107), Expect = 7.072e-7
Identity = 31/112 (27.68%), Postives = 50/112 (44.64%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVVQLENS--APYGLTLTKSHVYWTDWKNPNVHGAHKESGERLPSLPHVLD 110
            +DGS R   ++  +GR   L +D     + W+D     + G +  F     + +   S +     L ++   PYGLTL K  +YW+DW    +  A+K  G     L + LD
Sbjct:  808 LDGSSRSIFLND-VGRSYGLTIDFTASLLYWSD-----LDGSSIAF-----VSLVENSDKTITRLLSDTIKQPYGLTLYKDTIYWSDWDKSTIEKANKNDGSERIILQNKLD 908

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BLAST of low-density lipoprotein receptor-related protein 6-like vs. L. salmonis genes
Match: EMLSAG00000000937 (supercontig:LSalAtl2s:LSalAtl2s1165:73493:78626:1 gene:EMLSAG00000000937 transcript:EMLSAT00000000937 description:"maker-LSalAtl2s1165-augustus-gene-0.26")

HSP 1 Score: 50.8322 bits (120), Expect = 1.211e-8
Identity = 34/121 (28.10%), Postives = 60/121 (49.59%), Query Frame = 0

Query:    9 LVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVV-QLENSAPYGLTLTKSHVYWTDWKNPNVHGAHKESGE-RLPSLPHVLDMMGRPFGLVSVQ--NSC 125
             +DS + +P SL  D    ++ W D          +   K +    +  SS R VV +  +++PY +T+T++H++W+DW N  +  AHK   +  L ++ H+     RP G+ S+   N C
Sbjct:  195 FIDSNLSKPRSLIYDYWDLRLYWID---------TDENHKYKIERAFSDSSGRXVVCKGNDNSPYDITVTENHIFWSDWMNMVIWRAHKFGDKCELTAVKHLKS--SRPMGIASLSFPNKC 304

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BLAST of low-density lipoprotein receptor-related protein 6-like vs. SwissProt
Match: gi|290457669|sp|Q14112.3|NID2_HUMAN (RecName: Full=Nidogen-2; Short=NID-2; AltName: Full=Osteonidogen; Flags: Precursor)

HSP 1 Score: 56.9954 bits (136), Expect = 2.405e-9
Identity = 36/127 (28.35%), Postives = 58/127 (45.67%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVVQLENSAPYGLTLTKSHVYWTDWKNPNVHGAHKESGERLPSLPHVLDMMGRPFGLVSVQNSCPA 127
            +DG +R  L+++ IG PN L  D     +CW D G+           K+EC  +  G+ RR V+Q     P+ +     H Y TDW+   V   +K SG+      ++ +     +G+ +V   CP 
Sbjct: 1260 LDGENRRILINTDIGLPNGLTFDPFSKLLCWADAGT----------KKLECT-LPDGTGRR-VIQNNLKYPFSIVSYADHFYHTDWRRDGVVSVNKHSGQFTDE--YLPEQRSHLYGITAVYPYCPT 1372

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BLAST of low-density lipoprotein receptor-related protein 6-like vs. SwissProt
Match: gi|1708864|sp|P98157.1|LRP1_CHICK (RecName: Full=Low-density lipoprotein receptor-related protein 1; Short=LRP-1; AltName: Full=Alpha-2-macroglobulin receptor; Short=A2MR; Flags: Precursor)

HSP 1 Score: 56.6102 bits (135), Expect = 2.997e-9
Identity = 36/123 (29.27%), Postives = 62/123 (50.41%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVVQLENSAPYGLTLTKSHVYWTDWKNPNVHGAHKESGERLPSLPHVLDMMGRPFGLVSVQN 123
            + G++ + ++D  I  PN LA+D    +I ++D              KIE  E Y GS R  +++ E   P+GL +   +++WTDW    V  A+K  G  +  L   +D+  +P G+++V N
Sbjct: 2357 LSGANVLIIIDQDIRTPNGLAIDHRAEKIYFSDA----------TLDKIERCE-YDGSHRHVILKSEPVHPFGLAVYGDYIFWTDWVRRAVQRANKYVGTDMKLLR--VDIPQQPMGIIAVAN 2466

HSP 2 Score: 56.6102 bits (135), Expect = 3.602e-9
Identity = 31/99 (31.31%), Postives = 52/99 (52.53%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVVQLENSAPYGLTLTKSHVYWTDWKNPNVHGAHKESG 99
            MDG++R  +VD+ I  PN L +D    +I W D     +      F  ++      GS+R  V+  +    + LTL + ++YWTDW+  +++ AHK +G
Sbjct: 3172 MDGTNRSVIVDTKITWPNGLTLDYINSRIYWADAREDYIE-----FASLD------GSNRHTVLSQDIPHIFALTLFEDYIYWTDWETKSINRAHKTTG 3259

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BLAST of low-density lipoprotein receptor-related protein 6-like vs. SwissProt
Match: gi|290463279|sp|B5DFC9.1|NID2_RAT (RecName: Full=Nidogen-2; Short=NID-2; Flags: Precursor)

HSP 1 Score: 56.225 bits (134), Expect = 3.943e-9
Identity = 36/126 (28.57%), Postives = 58/126 (46.03%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVVQLENSAPYGLTLTKSHVYWTDWKNPNVHGAHKESGERLPSLPHVLDMMGRPFGLVSVQNSCP 126
            +DG +R  L++  IG PN L  D     +CW D G+           K+EC  +  G+ RR V+Q   + P+ +     H Y TDW+   V    K+SG+      ++ +     +G+ +V   CP
Sbjct: 1281 LDGENRRILINKDIGLPNGLTFDPFSKLLCWADAGT----------KKLECT-LPDGTGRR-VIQNHLNYPFSVVSYADHFYHTDWRRDGVISVSKDSGQLTDE--YLPEQRSHLYGITAVYPYCP 1392

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BLAST of low-density lipoprotein receptor-related protein 6-like vs. SwissProt
Match: gi|251757450|sp|P14543.3|NID1_HUMAN (RecName: Full=Nidogen-1; Short=NID-1; AltName: Full=Entactin; Flags: Precursor)

HSP 1 Score: 54.299 bits (129), Expect = 2.110e-8
Identity = 39/127 (30.71%), Postives = 58/127 (45.67%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVVQLENSAPYGLTLTKSHVYWTDWK-NPNVHGAHKESGERLPSLPHVLDMMGRPFGLVSVQNSCP 126
            MDG++R  LV   +G PN L  DA   Q+CW D G+           + EC+     S R+ +  L+   P+ +T    ++Y+TDWK N  V      S E     PH      R +G+ +  + CP
Sbjct: 1095 MDGTNRRILVQDDLGLPNGLTFDAFSSQLCWVDAGT----------NRAECLNPSQPSRRKALEGLQ--YPFAVTSYGKNLYFTDWKMNSVVALDLAISKETDAFQPH---KQTRLYGITTALSQCP 1206

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BLAST of low-density lipoprotein receptor-related protein 6-like vs. SwissProt
Match: gi|47117786|sp|P98163.2|YL_DROME (RecName: Full=Putative vitellogenin receptor; AltName: Full=Protein yolkless; Short=YL; Flags: Precursor)

HSP 1 Score: 54.299 bits (129), Expect = 2.135e-8
Identity = 33/100 (33.00%), Postives = 47/100 (47.00%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVVQLENSAPYGLTLTKSHVYWTDWKNPNVHGAHKESGE 100
            MDGS    +V   I  PN +A+D  + +I W D     +     V P         G+ RR V+      PYGL + +  +YW+DW   +VH  HK SG+
Sbjct:  547 MDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAK---LGSVQTVRPD--------GTGRRTVLDGMLKHPYGLAIFEDQLYWSDWATKSVHACHKFSGK 635

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BLAST of low-density lipoprotein receptor-related protein 6-like vs. SwissProt
Match: gi|341941172|sp|P10493.2|NID1_MOUSE (RecName: Full=Nidogen-1; Short=NID-1; AltName: Full=Entactin; Flags: Precursor)

HSP 1 Score: 51.9878 bits (123), Expect = 1.561e-7
Identity = 35/134 (26.12%), Postives = 55/134 (41.04%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGS-------PLMPGRAEVFPKIECMEMYGGSSRRPVVQLENSAPYGLTLTKSHVYWTDWKNPNVHGAHKESGERLPSL-PHVLDMMGRPFGLVSVQNSCP 126
            MDG++R  L    +G PN L  DA   Q+CW D G+       P  PGR +V   ++                    P+ +T    ++Y+TDWK  +V        + + +  PH      R +G+    + CP
Sbjct: 1093 MDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQ-------------------YPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPH---KQTRLYGITIALSQCP 1204

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BLAST of low-density lipoprotein receptor-related protein 6-like vs. SwissProt
Match: gi|1708868|sp|Q04833.1|LRP_CAEEL (RecName: Full=Low-density lipoprotein receptor-related protein; Short=LRP; Flags: Precursor)

HSP 1 Score: 50.0618 bits (118), Expect = 6.483e-7
Identity = 30/90 (33.33%), Postives = 46/90 (51.11%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEM--YGGSSRRPVVQLENSAP--YGLTLTKSHVYWTDW 86
            MDG++R TLV++   + + + VD    ++ W D             PK++ +E   Y G+ RR V Q  N  P  +GL L   ++YWTDW
Sbjct:  541 MDGTNRRTLVNTHTHQVSGIVVDITAKRVYWVD-------------PKVDRLESIDYQGNDRRIVAQGMNVVPHPFGLALFDQYLYWTDW 617

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BLAST of low-density lipoprotein receptor-related protein 6-like vs. SwissProt
Match: gi|296452912|sp|Q92673.2|SORL_HUMAN (RecName: Full=Sortilin-related receptor; AltName: Full=Low-density lipoprotein receptor relative with 11 ligand-binding repeats; Short=LDLR relative with 11 ligand-binding repeats; Short=LR11; AltName: Full=SorLA-1; AltName: Full=Sorting protein-related receptor containing LDLR class A repeats; Short=SorLA; Flags: Precursor)

HSP 1 Score: 50.0618 bits (118), Expect = 7.228e-7
Identity = 34/110 (30.91%), Postives = 52/110 (47.27%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVVQLEN-SAPYGLTLTKSHVYWTDWKNPNVHGAHKESGERLPSLPHVL 109
            MDGS    LV   +  PN ++VD +   I WTD               +EC+E    S ++  V L+N   PY + + K+ +YW DW   ++  A K SG ++  L + L
Sbjct:  907 MDGSAAYHLVSEDVKWPNGISVDDQ--WIYWTDA-------------YLECIERITFSGQQRSVILDNLPHPYAIAVFKNEIYWDDWSQLSIFRASKYSGSQMEILANQL 1001

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BLAST of low-density lipoprotein receptor-related protein 6-like vs. nr
Match: gi|1325298852|ref|XP_023331514.1| (nidogen-1-like isoform X3 [Eurytemora affinis])

HSP 1 Score: 112.464 bits (280), Expect = 2.992e-26
Identity = 54/127 (42.52%), Postives = 78/127 (61.42%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVVQLE-NSAPYGLTLTKSHVYWTDWKNPNVHGAHKESGERLPSLPHVLDMMGRPFGLVSVQNSCP 126
            MDGS R  LVD+ +G PNS+AVD   Y++CWTD G         + PKI+C+    G+ RR V +L     PYG+++T+  + WTDW+   VH   K +G R  S+P++L +MG+P+ +V VQ  CP
Sbjct: 1428 MDGSGRQVLVDTGVGEPNSIAVDYFNYEVCWTDAGR----SDRNIKPKIDCIGA-NGNGRRTVAELVPGDYPYGISITQDRILWTDWRKKFVHSVDKSTGVRQRSIPYILAVMGKPYDIVDVQEECP 1549

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BLAST of low-density lipoprotein receptor-related protein 6-like vs. nr
Match: gi|1325298845|ref|XP_023331511.1| (nidogen-1-like isoform X1 [Eurytemora affinis])

HSP 1 Score: 112.464 bits (280), Expect = 3.021e-26
Identity = 54/127 (42.52%), Postives = 78/127 (61.42%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVVQLE-NSAPYGLTLTKSHVYWTDWKNPNVHGAHKESGERLPSLPHVLDMMGRPFGLVSVQNSCP 126
            MDGS R  LVD+ +G PNS+AVD   Y++CWTD G         + PKI+C+    G+ RR V +L     PYG+++T+  + WTDW+   VH   K +G R  S+P++L +MG+P+ +V VQ  CP
Sbjct: 1429 MDGSGRQVLVDTGVGEPNSIAVDYFNYEVCWTDAGR----SDRNIKPKIDCIGA-NGNGRRTVAELVPGDYPYGISITQDRILWTDWRKKFVHSVDKSTGVRQRSIPYILAVMGKPYDIVDVQEECP 1550

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BLAST of low-density lipoprotein receptor-related protein 6-like vs. nr
Match: gi|1325298849|ref|XP_023331512.1| (nidogen-1-like isoform X2 [Eurytemora affinis])

HSP 1 Score: 112.464 bits (280), Expect = 3.172e-26
Identity = 54/127 (42.52%), Postives = 78/127 (61.42%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVVQLE-NSAPYGLTLTKSHVYWTDWKNPNVHGAHKESGERLPSLPHVLDMMGRPFGLVSVQNSCP 126
            MDGS R  LVD+ +G PNS+AVD   Y++CWTD G         + PKI+C+    G+ RR V +L     PYG+++T+  + WTDW+   VH   K +G R  S+P++L +MG+P+ +V VQ  CP
Sbjct: 1429 MDGSGRQVLVDTGVGEPNSIAVDYFNYEVCWTDAGR----SDRNIKPKIDCIGA-NGNGRRTVAELVPGDYPYGISITQDRILWTDWRKKFVHSVDKSTGVRQRSIPYILAVMGKPYDIVDVQEECP 1550

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BLAST of low-density lipoprotein receptor-related protein 6-like vs. nr
Match: gi|1005959484|ref|XP_015788092.1| (PREDICTED: nidogen-2-like [Tetranychus urticae])

HSP 1 Score: 83.9593 bits (206), Expect = 2.772e-16
Identity = 43/128 (33.59%), Postives = 70/128 (54.69%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVVQLENSAPYGLTLTKSHVYWTDWKNPNVHGAHKESG-ERLPSLPHVLDMMGRPFGLVSVQNSCPA 127
            MDG+ R+ LV   +  PN LA+D    ++CWTD G            +IEC+++YG  S+R +V   +  P+ L + + +++WTDW+  NVH   +  G E    +P   +  GR  G+V++  +CPA
Sbjct: 1141 MDGTGRVVLVSEAVKLPNMLAIDYMTNELCWTDAG----------LKRIECIDLYG--SKRRLVHYTSGYPFDLAIVEDYIFWTDWETNNVHRVGRNGGKEETLMIPKGSN--GRLHGIVAMAEACPA 1254

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BLAST of low-density lipoprotein receptor-related protein 6-like vs. nr
Match: gi|1067063309|ref|XP_018015563.1| (PREDICTED: nidogen-2-like, partial [Hyalella azteca])

HSP 1 Score: 82.4185 bits (202), Expect = 1.002e-15
Identity = 50/126 (39.68%), Postives = 66/126 (52.38%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVVQLENSAPYGLTLTKSHVYWTDWKNPNVHGAHKESGERLPSLPHVLDMMGRPFGLVSVQNSCP 126
            +DGS R  LVD  I  PNSL VD E   +CW D G            KIEC+ +  G  RR V++     P+GLTL   H Y+TDW +  VH  +K +G   PS P      G+ +G+V+V  +CP
Sbjct: 1641 LDGSYRRVLVDKDIQLPNSLVVDFETSTLCWADAG----------VNKIECVGV-NGHDRRTVIRGPK-YPFGLTLHLHHFYYTDWTDGRVHAVNKYTGTEEPSRPAPPGGSGKLYGIVAVPETCP 1754

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BLAST of low-density lipoprotein receptor-related protein 6-like vs. nr
Match: gi|1174743458|gb|OQV11910.1| (Nidogen-1 [Hypsibius dujardini])

HSP 1 Score: 82.0333 bits (201), Expect = 1.346e-15
Identity = 46/127 (36.22%), Postives = 69/127 (54.33%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVVQLENSAPYGLTLTKSHVYWTDWKNPNVHGAHKESGERLP-SLPHVLDMMGRPFGLVSVQNSCP 126
            MDGSDR TLV+  +G PN+LAVD +   +CW D G+           K+EC+ + G  S R ++    S P+ +T+ ++ +YWTDW   N+    K  G+  P  LP  +   G+ +G+ SV   CP
Sbjct:  957 MDGSDRRTLVNRELGLPNALAVDFQTDDLCWADAGN----------QKVECVALDG--SNRRLIHFGASYPFSMTVHENRLYWTDWGANNIMSVSKSGGDARPHELP--VGSSGKVYGITSVPVQCP 1069

[Close]

BLAST of low-density lipoprotein receptor-related protein 6-like vs. nr
Match: gi|1174743457|gb|OQV11909.1| (Nidogen-1 [Hypsibius dujardini])

HSP 1 Score: 82.0333 bits (201), Expect = 1.363e-15
Identity = 46/127 (36.22%), Postives = 69/127 (54.33%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVVQLENSAPYGLTLTKSHVYWTDWKNPNVHGAHKESGERLP-SLPHVLDMMGRPFGLVSVQNSCP 126
            MDGSDR TLV+  +G PN+LAVD +   +CW D G+           K+EC+ + G  S R ++    S P+ +T+ ++ +YWTDW   N+    K  G+  P  LP  +   G+ +G+ SV   CP
Sbjct: 1002 MDGSDRRTLVNRELGLPNALAVDFQTDDLCWADAGN----------QKVECVALDG--SNRRLIHFGASYPFSMTVHENRLYWTDWGANNIMSVSKSGGDARPHELP--VGSSGKVYGITSVPVQCP 1114

[Close]

BLAST of low-density lipoprotein receptor-related protein 6-like vs. nr
Match: gi|1233164457|ref|XP_022184107.1| (nidogen-2 [Nilaparvata lugens])

HSP 1 Score: 81.2629 bits (199), Expect = 2.255e-15
Identity = 46/127 (36.22%), Postives = 67/127 (52.76%), Query Frame = 0

Query:    1 MDGSDRITLVDS-LIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVVQLENSAPYGLTLTKSHVYWTDWKNPNVHGAHKESGERLPSLPHVLDMMGRPFGLVSVQNSCP 126
            +DGS++  LV    +  PNSLA+D +  ++CW D G+            IEC+ +   + RR VV   N  P+GL +T    YWTDW    +  + K SGER  S+P  L   G+ +G+V V  +CP
Sbjct: 1227 LDGSNKAILVQGPAVQLPNSLAIDWQTDELCWADAGTK----------SIECISL-STNIRRTVVTNCNY-PFGLAITNDKYYWTDWDTQKIESSWKHSGERAESIPVPLGGAGKLYGIVPVTGTCP 1341

[Close]

BLAST of low-density lipoprotein receptor-related protein 6-like vs. nr
Match: gi|934159915|gb|KPM08846.1| (nidogen-1-like protein [Sarcoptes scabiei])

HSP 1 Score: 81.2629 bits (199), Expect = 2.764e-15
Identity = 43/128 (33.59%), Postives = 68/128 (53.12%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVVQLENSAPYGLTLTKSHVYWTDWKNPNVHGAHKESG--ERLPSLPHVLDMMGRPFGLVSVQNSCP 126
            +DG  R  L+++ +  PN+L +D ++ ++CWTD G            +IEC+ +   S  R VV    S P+ LT+   ++YWTDW+   +H  H+  G  +RL  +P  L   G  +GLV+V   CP
Sbjct: 1189 LDGKHRAILIETELSLPNNLVIDYDRDELCWTDAG----------LDRIECIHLM--SLNRRVVYAHASYPFDLTVANQNIYWTDWETKTIHQIHRNGGIAKRL-EIP--LGGQGSLYGLVAVPRKCP 1301

[Close]

BLAST of low-density lipoprotein receptor-related protein 6-like vs. nr
Match: gi|1101387050|dbj|GAU95659.1| (hypothetical protein RvY_07242 [Ramazzottius varieornatus])

HSP 1 Score: 80.1073 bits (196), Expect = 5.949e-15
Identity = 48/127 (37.80%), Postives = 67/127 (52.76%), Query Frame = 0

Query:    1 MDGSDRITLVDSLIGRPNSLAVDAEKYQICWTDGGSPLMPGRAEVFPKIECMEMYGGSSRRPVVQLENSAPYGLTLTKSHVYWTDWKNPNVHGAHKESGE-RLPSLPHVLDMMGRPFGLVSVQNSCP 126
            MDGSDR TLV+  +G PN+LAVD     +CW D G+           KIEC+ + G + R  +V      P+ +T+  S +YWTDW   N+    K   + R   LP  L   G+ +G+VSV + CP
Sbjct:  994 MDGSDRRTLVNRDLGLPNALAVDHTTDDLCWADAGN----------QKIECVTLDGNNRR--MVYFGAQYPFSMTVHDSRLYWTDWGANNIMSVSKNGADVRTHELP--LGSSGKVYGIVSVPDVCP 1106

The following BLAST results are available for this feature:

BLAST of low-density lipoprotein receptor-related protein 6-like vs. L. salmonis genes
BLAST of low-density lipoprotein receptor-related protein 6-like vs. SwissProt
BLAST of low-density lipoprotein receptor-related protein 6-like vs. nr

BLAST of low-density lipoprotein receptor-related protein 6-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 3


Match Name	E-value	Identity	Description
EMLSAG00000001761	6.874e-26	50.55	supercontig:LSalAtl2s:LSalAtl2s12:1804673:1851639:...	[more]
EMLSAG00000004273	2.921e-13	35.09	supercontig:LSalAtl2s:LSalAtl2s224:244283:302537:1...	[more]
EMLSAG00000000937	1.211e-8	28.10	supercontig:LSalAtl2s:LSalAtl2s1165:73493:78626:1 ...	[more]

BLAST of low-density lipoprotein receptor-related protein 6-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 18


Match Name	E-value	Identity	Description
gi\|290457669\|sp\|Q14112.3\|NID2_HUMAN	2.405e-9	28.35	RecName: Full=Nidogen-2; Short=NID-2; AltName: Ful...	[more]
gi\|1708864\|sp\|P98157.1\|LRP1_CHICK	2.997e-9	29.27	RecName: Full=Low-density lipoprotein receptor-rel...	[more]
gi\|290463279\|sp\|B5DFC9.1\|NID2_RAT	3.943e-9	28.57	RecName: Full=Nidogen-2; Short=NID-2; Flags: Precu...	[more]
gi\|251757450\|sp\|P14543.3\|NID1_HUMAN	2.110e-8	30.71	RecName: Full=Nidogen-1; Short=NID-1; AltName: Ful...	[more]
gi\|47117786\|sp\|P98163.2\|YL_DROME	2.135e-8	33.00	RecName: Full=Putative vitellogenin receptor; AltN...	[more]
gi\|341941172\|sp\|P10493.2\|NID1_MOUSE	1.561e-7	26.12	RecName: Full=Nidogen-1; Short=NID-1; AltName: Ful...	[more]
gi\|1708868\|sp\|Q04833.1\|LRP_CAEEL	6.483e-7	33.33	RecName: Full=Low-density lipoprotein receptor-rel...	[more]
gi\|296452912\|sp\|Q92673.2\|SORL_HUMAN	7.228e-7	30.91	RecName: Full=Sortilin-related receptor; AltName: ...	[more]

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BLAST of low-density lipoprotein receptor-related protein 6-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1325298852\|ref\|XP_023331514.1\|	2.992e-26	42.52	nidogen-1-like isoform X3 [Eurytemora affinis]	[more]
gi\|1325298845\|ref\|XP_023331511.1\|	3.021e-26	42.52	nidogen-1-like isoform X1 [Eurytemora affinis]	[more]
gi\|1325298849\|ref\|XP_023331512.1\|	3.172e-26	42.52	nidogen-1-like isoform X2 [Eurytemora affinis]	[more]
gi\|1005959484\|ref\|XP_015788092.1\|	2.772e-16	33.59	PREDICTED: nidogen-2-like [Tetranychus urticae]	[more]
gi\|1067063309\|ref\|XP_018015563.1\|	1.002e-15	39.68	PREDICTED: nidogen-2-like, partial [Hyalella aztec...	[more]
gi\|1174743458\|gb\|OQV11910.1\|	1.346e-15	36.22	Nidogen-1 [Hypsibius dujardini]	[more]
gi\|1174743457\|gb\|OQV11909.1\|	1.363e-15	36.22	Nidogen-1 [Hypsibius dujardini]	[more]
gi\|1233164457\|ref\|XP_022184107.1\|	2.255e-15	36.22	nidogen-2 [Nilaparvata lugens]	[more]
gi\|934159915\|gb\|KPM08846.1\|	2.764e-15	33.59	nidogen-1-like protein [Sarcoptes scabiei]	[more]
gi\|1101387050\|dbj\|GAU95659.1\|	5.949e-15	37.80	hypothetical protein RvY_07242 [Ramazzottius varie...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold111_size354240	supercontig	scaffold111_size354240:92344..92854 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold111_size354240-snap-gene-1.11-mRNA-1	maker-scaffold111_size354240-snap-gene-1.11-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold111_size354240:92344..92854+

gene from alignment at scaffold111_size354240:92344..92854+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold111_size354240-snap-gene-1.11 ID=maker-scaffold111_size354240-snap-gene-1.11|Name=low-density lipoprotein receptor-related protein 6-like|organism=Tigriopus kingsejongensis|type=gene|length=511bp|location=Sequence derived from alignment at scaffold111_size354240:92344..92854+ (Tigriopus kingsejongensis)
ATGGATGGATCGGACCGGATAACCCTGGTAGACAGTTTAATTGGGCGGCC
CAACTCTCTGGCCGTTGATGCCGAGAAGTACCAGATATGCTGGACGGATG
GAGGAAGTCCACTTATGCCAGGCAGGGCTGAAGTATTTCCGAAAATAGGT
AAAGGGCCAAATACAATAAAAATGATCCTCACAACAGTTCTCAATTTGTA
CTTTAATATTTCAGAATGTATGGAAATGTATGGCGGAAGCAGTCGGCGGC
CAGTTGTTCAGTTGGAGAATAGTGCACCCTACGGATTGACGCTAACCAAG
TCCCACGTGTATTGGACGGATTGGAAAAAGTAATACTCGGCAAAGTCTCG
ACACATTTAGGATATGTTCTCTTTCATTCATAATTATTTATAGTCCCAAC
GTCCACGGAGCCCATAAAGAATCGGGCGAAAGACTCCCATCCCTGCCGCA
TGTTCTCGATATGATGGGAAGACCTTTTGGTCTGGTGTCGGTTCAAAACT
CATGTCCAGCA

Synonyms

The feature 'low-density lipoprotein receptor-related protein 6-like' has the following synonyms


Synonym
Tk11902

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