glycine receptor subunit alpha-3-like, maker-scaffold1121_size61474-snap-gene-0.22 (gene) Tigriopus kingsejongensis

Overview
Nameglycine receptor subunit alpha-3-like
Unique Namemaker-scaffold1121_size61474-snap-gene-0.22
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of glycine receptor subunit alpha-3-like vs. L. salmonis genes
Match: EMLSAG00000011211 (supercontig:LSalAtl2s:LSalAtl2s765:133774:155316:1 gene:EMLSAG00000011211 transcript:EMLSAT00000011211 description:"maker-LSalAtl2s765-snap-gene-1.16")

HSP 1 Score: 103.219 bits (256), Expect = 2.019e-24
Identity = 72/273 (26.37%), Postives = 122/273 (44.69%), Query Frame = 0 
Query:   89 FFAQSWKDNRLRLPDNMT--SEYRLLPIEW-------LTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISH---------TTDDLIFIWDPQIPLDVDKGIELPQLELISTKN---------DDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVM 334
            +F  SW D RL++  + +  SE R  P          L  IW P+      +    Q +      + + K+KTI Y + + + +SC M F +YP D  +C  ++ S  +         +T  L+  +D    +         Q+   S ++          D +    +G +          R+   YL   Y+P+C+ V+ SW+SF IKPE VP R+ L VT  L L     + ++  P  S + AID+++  C   VF +LMEYA++ +++
Sbjct:    1 YFGVSWLDPRLKINSSASEWSEARTGPKNEVNISPGSLRYIWYPELEIYGLEKFGRQRVLKEMSGVRIRKNKTIHYELGVRITISCRMMFDDYPLDAHTCQFQVGSCKYQDITRPWGKSTYQLLSDYDSNKTVQCSSSYVYDQIRQRSLQHYITFEELPEKDRSVVLPSGTYAACGFQIQLVRKQMQYLVQVYLPSCMFVVTSWVSFLIKPEVVPGRMALLVTLFLVLINIFNSVRERAPISSKLNAIDLYLVVCIFLVFGALMEYAVILLLL 273
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BLAST of glycine receptor subunit alpha-3-like vs. L. salmonis genes
Match: EMLSAG00000001113 (supercontig:LSalAtl2s:LSalAtl2s1186:160345:169896:1 gene:EMLSAG00000001113 transcript:EMLSAT00000001113 description:"maker-LSalAtl2s1186-snap-gene-1.38")

HSP 1 Score: 105.531 bits (262), Expect = 3.611e-24
Identity = 85/313 (27.16%), Postives = 143/313 (45.69%), Query Frame = 0 
Query:   44 PQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYR------------LLPI--EWLTEIWRPDSFFKNAKSVTFQTMTIPNHY--IWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWD------PQ----IPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALV 330
            P+N   Y K   P  KG    +   + +  +  I++   + T   +F   W+++R+ L  +   E              ++P+  E++ ++W PD F  + K  T++ M + N    +W+  DKTILY     +   CPM F  +P DTQ C  ++ S S+    + F+ +      P+    I LD D      Q++++S K D        G F+      +  R +  Y+   Y+P+ L VI+SWISF I  + +P R+ L VT  L L         + P    + AI+ +M  C +FVF +L+EY  +
Sbjct:   68 PRN---YSKFDLPVKKG-VNHITVSIDIAEVLRINDKDYSITFSGYFNVKWQESRIELSPDFGEEVAGPGVNTTNNPNIVVPMSTEFVKDVWMPDIFIYSLK--TYKVMDVLNKLAGLWIGADKTILYSQATHITFICPMRFDKFPLDTQVCKFQVGSCSYDDTKMRFMTENAGYQSPKTANSIALDYDI-----QIKMLS-KEDQVFLGGGLGNFSLAGFELVLHRYVSTYIITYYLPSGLFVIVSWISFLIPMDVIPGRMALLVTLFLVLVNIFNTVTTNTPKAEGLTAIEAWMLACILFVFGALIEYXAI 368
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BLAST of glycine receptor subunit alpha-3-like vs. L. salmonis genes
Match: EMLSAG00000003313 (supercontig:LSalAtl2s:LSalAtl2s181:399664:401012:-1 gene:EMLSAG00000003313 transcript:EMLSAT00000003313 description:"maker-LSalAtl2s181-augustus-gene-4.10")

HSP 1 Score: 103.605 bits (257), Expect = 6.070e-24
Identity = 77/306 (25.16%), Postives = 139/306 (45.42%), Query Frame = 0 
Query:   43 MPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLP----------IEWLTEIWRPDSFFKNAKSVTFQTMTIPNHY--IWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIP-------LDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYAL 329
            +P+N   Y K   P  + +AT +   V +  +  I++   + T + +F   W D RLR+    +S+    P           + + ++W  D    N  S  F+T+++ +    +W+ ++  ++Y +   + + C M F  +P D Q C  ++ S ++  + +IF  D  IP         +D  +    L    T        YS   F  +       R++ +Y+   Y+P+ L V++SWISF + PE +P R+TL VT  L L       Q + P    + AI+ ++  C +FVF +L EY +
Sbjct:   37 LPKN---YAKYELPD-EDSATPIIVGVDIKDIPKINDVDFSITLNAYFYVKWVDKRLRILSYNSSDINRKPHMKKQSIAINSKIIEKLWLXDVEILNLSS--FETLSVLSKLEGVWIGENSELMYSLATRITIICRMKFNAFPMDIQVCKFQVGSFNYDMNKMIFFND-FIPSKQNSQQTTLDYQVNFQDLRPDETHYLALGMNYSVAGFQII-----LTRKVSFYIVTYYLPSALFVLVSWISFLVNPEVIPGRMTLLVTIFLVLINIFNTIQTNSPKADGLTAIEAWVIACIIFVFGALGEYTV 330
[Close]
BLAST of glycine receptor subunit alpha-3-like vs. L. salmonis genes
Match: EMLSAG00000008455 (supercontig:LSalAtl2s:LSalAtl2s519:173869:181393:1 gene:EMLSAG00000008455 transcript:EMLSAT00000008455 description:"snap_masked-LSalAtl2s519-processed-gene-1.11")

HSP 1 Score: 102.064 bits (253), Expect = 6.178e-24
Identity = 72/272 (26.47%), Postives = 126/272 (46.32%), Query Frame = 0 
Query:   68 HVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLW--KDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQI--PLDVDKGIELPQLELISTKNDDCTTEYS-TGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVM 334
            H+ V+ +  +D+   + T +++F   W +NRL      TS +  + ++++  +W P+ F  N   V+F  +        LW  + K + Y     +   CPM F  +P D  SC   + S ++    ++F ++     PL  +  ++  ++++   K  D    Y  TG ++         R +  YL+  Y+P+ L V +SW+SF I P+ VP R+ L VT  L L           P V  + AI  +M  C  FVF +L+ YA +  V+
Sbjct:    2 HLEVLDVLRVDDKKFSVTLNMYFGVRWTENRLTKMTPGTSSWIPIDMDFMNYLWVPNVFVYNL--VSFHALDCLKKLAGLWVAEGKDLFYNQATHVTFMCPMRFNKFPLDQHSCKFLVGSTNYDMTRMLFDYNTLSYDPLSGNTILDY-RIQIKPLKTADRIINYGETGNYSLTGFEMTLTRNMAKYLYIYYLPSGLFVGVSWVSFLIPPDVVPGRMALLVTLFLVLINIFNTITNVSPNVEGMXAISSWMIACMFFVFGALLGYAAILYVL 270
[Close]
BLAST of glycine receptor subunit alpha-3-like vs. L. salmonis genes
Match: EMLSAG00000009137 (supercontig:LSalAtl2s:LSalAtl2s575:53505:62115:1 gene:EMLSAG00000009137 transcript:EMLSAT00000009137 description:"maker-LSalAtl2s575-augustus-gene-0.8")

HSP 1 Score: 102.834 bits (255), Expect = 3.657e-23
Identity = 70/264 (26.52%), Postives = 128/264 (48.48%), Query Frame = 0 
Query:   48 KLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEI-----WRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLE-LISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSY 305
            K Y  M  P  KG+   VN  + + ++  ++E     T +      W+D R+  P N  S++    I +  +I     W PD F   AK+       +    +  +K++ +   +++   + C M F  YP+D Q C++ +ES   + DD+   WD    + ++  I L Q   LI  K  D  ++ ++  ++ L +    +R + Y++  T++P+ + VI+ WIS ++ P+A+P RV + + SLLT      + + S P VSY
Sbjct:   32 KDYSVMEGPHNKGSPLHVNISINLRNIFEVNEKLSLITVETSIRMIWQDPRI-YPTNNGSDWDFDFITFNGKIVKRKFWIPDVFIDGAKNARIPKYHLQPMSLRYYKNRNLRLSLRINFDVICQMDFHKYPNDEQLCDIPLESWDTSMDDMKLNWDLSNSV-INPNITLDQFSPLIYFKKYDTQSDMTS--YSGLIIRIQLQRLIPYHVIQTFIPSIVFVILGWISLFLDPQAIPGRVKMVMLSLLTSLAMFNSVRDSTPQVSY 291
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BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Match: gi|66774025|sp|Q91XP5.2|GLRA3_MOUSE (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor)

HSP 1 Score: 276.174 bits (705), Expect = 2.054e-85
Identity = 137/333 (41.14%), Postives = 202/333 (60.66%), Query Frame = 0 
Query:    5 ISGNVFAFWSILIYITIVGRGDANDSSDLDNPLELGDIMPQ---NRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKN-DDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIV 333
            +SG  F FW   + +++V   + N +     P+   D + +       YD    P +KG    V  ++ + S  +I E++M Y  ++F  Q W D RL   +       L P   L  IW+PD FF N K   F  +T  N  + ++K+  +LY ++LTL LSCPM  KN+P D Q+C +++ES  +T +DLIF W  + P+ V +G+ LPQ  L   K+   CT  Y+TGKFTC+EV F  +R++GYYL   Y+P+ LIVI+SW+SFWI  +A PARV LG+T++LT++TQ + S+ SLP VSY+KAID++M+ C +FVF +L+EYA VN V
Sbjct:   11 VSG--FYFWEAALLLSLVATKETNSARSRSAPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDP-SMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFV 340
[Close]
BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Match: gi|121580|sp|P24524.1|GLRA3_RAT (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor)

HSP 1 Score: 276.174 bits (705), Expect = 2.309e-85
Identity = 135/328 (41.16%), Postives = 199/328 (60.67%), Query Frame = 0 
Query:   10 FAFWSILIYITIVGRGDANDSSDLDNPLELGDIMPQ---NRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKN-DDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIV 333
            F FW   + +++V   + N +     P+   D + +       YD    P +KG    V  ++ + S  +I E++M Y  ++F  Q W D RL   +       L P   L  IW+PD FF N K   F  +T  N  + ++K+  +LY ++LTL LSCPM  KN+P D Q+C +++ES  +T +DLIF W  + P+ V +G+ LPQ  L   K+   CT  Y+TGKFTC+EV F  +R++GYYL   Y+P+ LIVI+SW+SFWI  +A PARV LG+T++LT++TQ + S+ SLP VSY+KAID++M+ C +FVF +L+EYA VN V
Sbjct:   14 FYFWEAALLLSLVATKETNSARSRSAPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDP-SMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFV 340
[Close]
BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Match: gi|116242496|sp|O75311.2|GLRA3_HUMAN (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor)

HSP 1 Score: 274.248 bits (700), Expect = 9.504e-85
Identity = 136/333 (40.84%), Postives = 202/333 (60.66%), Query Frame = 0 
Query:    5 ISGNVFAFWSILIYITIVGRGDANDSSDLDNPLELGDIMPQ---NRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKN-DDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIV 333
            +SG  F FW   + +++V   + + +     P+   D + +       YD    P +KG    V  ++ + S  +I E++M Y  ++F  Q W D RL   +       L P   L  IW+PD FF N K   F  +T  N  + ++K+  +LY ++LTL LSCPM  KN+P D Q+C +++ES  +T +DLIF W  + P+ V +G+ LPQ  L   K+   CT  Y+TGKFTC+EV F  +R++GYYL   Y+P+ LIVI+SW+SFWI  +A PARV LG+T++LT++TQ + S+ SLP VSY+KAID++M+ C +FVF +L+EYA VN V
Sbjct:   11 VSG--FYFWEAALLLSLVATKETDSARSRSAPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDP-SMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFV 340
[Close]
BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Match: gi|12230887|sp|P07727.4|GLRA1_RAT (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor)

HSP 1 Score: 265.388 bits (677), Expect = 1.972e-81
Identity = 130/328 (39.63%), Postives = 196/328 (59.76%), Query Frame = 0 
Query:   10 FAFWSILIYITIVGRGDANDSSDLDNPLELGDIMPQ---NRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKN-DDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIV 333
            F  W  +++ ++    +A+ +     P+   D + +       YD    P +KG    V+ ++ + S  +I E++M Y  ++F  Q W D RL   +       L P   L  IW+PD FF N K   F  +T  N  + + ++  +LY +++TL L+CPM  KN+P D Q+C +++ES  +T +DLIF W  Q  + V  G+ LPQ  L   K+   CT  Y+TGKFTC+E  F  +R++GYYL   Y+P+ LIVI+SWISFWI  +A PARV LG+T++LT++TQ + S+ SLP VSY+KAID++M+ C +FVF +L+EYA VN V
Sbjct:    9 FYLWETIVFFSLAASKEADAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDP-SMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFV 335
[Close]
BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Match: gi|12644459|sp|Q64018.2|GLRA1_MOUSE (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor)

HSP 1 Score: 265.003 bits (676), Expect = 2.741e-81
Identity = 130/328 (39.63%), Postives = 195/328 (59.45%), Query Frame = 0 
Query:   10 FAFWSILIYITIVGRGDANDSSDLDNPLELGDIMPQ---NRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKN-DDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIV 333
            F  W  +++ ++    +A  +     P+   D + +       YD    P +KG    V+ ++ + S  +I E++M Y  ++F  Q W D RL   +       L P   L  IW+PD FF N K   F  +T  N  + + ++  +LY +++TL L+CPM  KN+P D Q+C +++ES  +T +DLIF W  Q  + V  G+ LPQ  L   K+   CT  Y+TGKFTC+E  F  +R++GYYL   Y+P+ LIVI+SWISFWI  +A PARV LG+T++LT++TQ + S+ SLP VSY+KAID++M+ C +FVF +L+EYA VN V
Sbjct:    9 FYLWETIVFFSLAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDP-SMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFV 335
[Close]
BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Match: gi|66774003|sp|Q7TNC8.1|GLRA2_MOUSE (RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor)

HSP 1 Score: 264.618 bits (675), Expect = 4.099e-81
Identity = 127/285 (44.56%), Postives = 181/285 (63.51%), Query Frame = 0 
Query:   50 YDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKN-DDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIV 333
            YD    P +KG    V  ++ + S  ++ E++M Y  ++F  Q W D+RL   +       L P   L  IW+PD FF N K   F  +T  N  + + K+  +LY ++LTL LSCPM  KN+P D Q+C +++ES  +T +DLIF W    P+ V +G+ LPQ  L   K    CT  Y+TGKFTC+EV F  +R++GYYL   Y+P+ LIVI+SW+SFWI  +A PARV LG+T++LT++TQ + S+ SLP VSY+KAID++M+ C +FVF +L+EYA VN V
Sbjct:   58 YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDP-SMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFV 341
[Close]
BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Match: gi|121578|sp|P23416.1|GLRA2_HUMAN (RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor)

HSP 1 Score: 264.618 bits (675), Expect = 4.558e-81
Identity = 127/285 (44.56%), Postives = 181/285 (63.51%), Query Frame = 0 
Query:   50 YDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKN-DDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIV 333
            YD    P +KG    V  ++ + S  ++ E++M Y  ++F  Q W D+RL   +       L P   L  IW+PD FF N K   F  +T  N  + + K+  +LY ++LTL LSCPM  KN+P D Q+C +++ES  +T +DLIF W    P+ V +G+ LPQ  L   K    CT  Y+TGKFTC+EV F  +R++GYYL   Y+P+ LIVI+SW+SFWI  +A PARV LG+T++LT++TQ + S+ SLP VSY+KAID++M+ C +FVF +L+EYA VN V
Sbjct:   58 YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDP-SMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFV 341
[Close]
BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Match: gi|12644526|sp|P57695.1|GLRA1_BOVIN (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor)

HSP 1 Score: 264.618 bits (675), Expect = 4.709e-81
Identity = 129/326 (39.57%), Postives = 194/326 (59.51%), Query Frame = 0 
Query:   12 FWSILIYITIVGRGDANDSSDLDNPLELGDIMPQ---NRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKN-DDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIV 333
             W  +++ ++    +A  +     P+   D + +       YD    P +KG    V+ ++ + S  +I E++M Y  ++F  Q W D RL   +       L P   L  IW+PD FF N K   F  +T  N  + + ++  +LY +++TL L+CPM  KN+P D Q+C +++ES  +T +DLIF W  Q  + V  G+ LPQ  L   K+   CT  Y+TGKFTC+E  F  +R++GYYL   Y+P+ LIVI+SWISFWI  +A PARV LG+T++LT++TQ + S+ SLP VSY+KAID++M+ C +FVF +L+EYA VN V
Sbjct:   11 LWETIVFFSLAASKEAEAARSASKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDP-SMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFV 335
[Close]
BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Match: gi|121579|sp|P22771.1|GLRA2_RAT (RecName: Full=Glycine receptor subunit alpha-2; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor)

HSP 1 Score: 264.233 bits (674), Expect = 5.123e-81
Identity = 127/285 (44.56%), Postives = 181/285 (63.51%), Query Frame = 0 
Query:   50 YDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKN-DDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIV 333
            YD    P +KG    V  ++ + S  ++ E++M Y  ++F  Q W D+RL   +       L P   L  IW+PD FF N K   F  +T  N  + + K+  +LY ++LTL LSCPM  KN+P D Q+C +++ES  +T +DLIF W    P+ V +G+ LPQ  L   K    CT  Y+TGKFTC+EV F  +R++GYYL   Y+P+ LIVI+SW+SFWI  +A PARV LG+T++LT++TQ + S+ SLP VSY+KAID++M+ C +FVF +L+EYA VN V
Sbjct:   58 YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDP-SMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFEYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFV 341
[Close]
BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Match: gi|116242495|sp|P23415.2|GLRA1_HUMAN (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor)

HSP 1 Score: 263.848 bits (673), Expect = 8.533e-81
Identity = 129/326 (39.57%), Postives = 194/326 (59.51%), Query Frame = 0 
Query:   12 FWSILIYITIVGRGDANDSSDLDNPLELGDIMPQ---NRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKN-DDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIV 333
             W  +++ ++    +A  +     P+   D + +       YD    P +KG    V+ ++ + S  +I E++M Y  ++F  Q W D RL   +       L P   L  IW+PD FF N K   F  +T  N  + + ++  +LY +++TL L+CPM  KN+P D Q+C +++ES  +T +DLIF W  Q  + V  G+ LPQ  L   K+   CT  Y+TGKFTC+E  F  +R++GYYL   Y+P+ LIVI+SWISFWI  +A PARV LG+T++LT++TQ + S+ SLP VSY+KAID++M+ C +FVF +L+EYA VN V
Sbjct:   11 LWETIVFFSLAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDP-SMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFV 335
[Close]
BLAST of glycine receptor subunit alpha-3-like vs. nr
Match: gi|780707119|ref|XP_011703491.1| (PREDICTED: glycine receptor subunit alpha-3 isoform X2 [Wasmannia auropunctata])

HSP 1 Score: 500.36 bits (1287), Expect = 4.914e-171
Identity = 230/307 (74.92%), Postives = 264/307 (85.99%), Query Frame = 0 
Query:   30 SSDLDNPLELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGD 336
            +++    LE  D++P++ KLYDKMRPPK  G AT V FHVTVM LD+IDE+SMTY  D+FFAQ+WKDNRLRLP+NMTSEYRLL ++WL  +WRPDSFFKNAKSVTFQTMTIPNHY+WL+KDKTILYMVKLTL LSC M+F  YPHDTQ C L++ES+SHTTD++IF WDP +PL VD+ IELPQL+L+     DCT  YSTG FTCLEVVF+ KRRLGYYLFHTYVPTCLIVIMSW+SFWIKPEA PARVTLGVTSLLTLSTQHA SQ SLPPVSY+KA+D FMS CTVFVF++LMEY LVNIV+GD
Sbjct:   26 AANAQRSLEFFDLLPEDPKLYDKMRPPKKDGQATVVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDNRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWDPDVPLVVDENIELPQLQLVKNYTADCTQVYSTGNFTCLEVVFVLKRRLGYYLFHTYVPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTVFVFMALMEYCLVNIVLGD 332
[Close]
BLAST of glycine receptor subunit alpha-3-like vs. nr
Match: gi|1059231852|ref|XP_017761064.1| (PREDICTED: glycine receptor subunit alpha-2 isoform X2 [Eufriesea mexicana])

HSP 1 Score: 500.36 bits (1287), Expect = 4.980e-171
Identity = 230/307 (74.92%), Postives = 264/307 (85.99%), Query Frame = 0 
Query:   30 SSDLDNPLELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGD 336
            ++D    LE  D++P++ KLYDKMRPPK  G AT V FHVTVM LD+IDE+SMTY  D+FFAQ+WKDNRLRLP+NMTSEYRLL ++WL  +WRPDSFFKNAKSVTFQTMTIPNHY+WL+KDKTILYMVKLTL LSC M+F  YPHDTQ C L++ES+SHTTD++IF WDP +PL VD+ IELPQL+L+     DCT  YSTG FTCLEVVF+ KRRLGYYLFHTY+PTCLIVIMSW+SFWIKPEA PARVTLGVTSLLTLSTQHA SQ SLPPVSY+KA+D FMS CTVFVF++LMEY LVNIV+GD
Sbjct:   28 TADAQRSLEFFDLLPEDPKLYDKMRPPKKDGQATVVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDNRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWDPDVPLVVDENIELPQLQLVKNYTADCTQVYSTGNFTCLEVVFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTVFVFMALMEYCLVNIVLGD 334
[Close]
BLAST of glycine receptor subunit alpha-3-like vs. nr
Match: gi|1153840138|ref|XP_020296883.1| (glycine receptor subunit alpha-3 isoform X1 [Pseudomyrmex gracilis])

HSP 1 Score: 501.901 bits (1291), Expect = 5.039e-171
Identity = 229/307 (74.59%), Postives = 263/307 (85.67%), Query Frame = 0 
Query:   30 SSDLDNPLELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGD 336
            +S+    LE  D++P++ K YDKMRPPK  G AT V FHVTVM LD+IDE+SMTY  D+FFAQ+WKDNRLRLP+NMTSEYRLL ++WL  +WRPDSFFKNAKSVTFQTMTIPNHY+WL+KDKTILYMVKLTL LSC M+F  YPHDTQ C L++ES+SHTTD++IF WDP +PL VD+ IELPQL+L+     DCT  YSTG FTCLEVVF+ KRRLGYYLFHTYVPTCLIVIMSW+SFWIKPEA PARVTLGVTSLLTLSTQHA SQ SLPPVSY+KA+D FMS CT+FVF++LMEY LVNIV+GD
Sbjct:   26 ASNAQRSLEFFDLLPEDPKFYDKMRPPKKDGQATVVYFHVTVMGLDSIDETSMTYAADIFFAQTWKDNRLRLPENMTSEYRLLEVDWLRNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWDPDVPLVVDENIELPQLQLVKNYTADCTQVYSTGNFTCLEVVFVLKRRLGYYLFHTYVPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTIFVFMALMEYCLVNIVLGD 332
[Close]
BLAST of glycine receptor subunit alpha-3-like vs. nr
Match: gi|826411623|ref|XP_012542850.1| (PREDICTED: glycine receptor subunit alpha-3 isoform X1 [Monomorium pharaonis])

HSP 1 Score: 500.745 bits (1288), Expect = 5.693e-171
Identity = 229/307 (74.59%), Postives = 265/307 (86.32%), Query Frame = 0 
Query:   30 SSDLDNPLELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGD 336
            +++    LE  D++P++ KLYDKMRPPK  G AT V FHVTVM LD+IDE+SMTY  D+FFAQ+WKDNRLRLP+NMTSEYRLL ++WL  +WRPDSFFKNAKSVTFQTMTIPNHY+WL+KDKTILYMVKLTL LSC M+F  YPHDTQ C L++ES+SHTTD++IF WDP++PL VD+ IELPQL+L+     DCT  YSTG FTCLEVVF+ KRRLGYYLFHTYVPTCLIVIMSW+SFWIKPEA PARVTLGVTSLLTLSTQHA SQ SLPPVSY+KA+D FMS CT+FVF++LMEY LVNIV+GD
Sbjct:   26 AANAQRSLEFFDLLPEDPKLYDKMRPPKKDGQATVVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDNRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWDPEVPLVVDENIELPQLQLVKNYTADCTQVYSTGNFTCLEVVFVLKRRLGYYLFHTYVPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTIFVFMALMEYCLVNIVLGD 332
[Close]
BLAST of glycine receptor subunit alpha-3-like vs. nr
Match: gi|1000718471|ref|XP_015599519.1| (PREDICTED: glycine receptor subunit alpha-2 isoform X3 [Cephus cinctus])

HSP 1 Score: 500.36 bits (1287), Expect = 6.415e-171
Identity = 237/335 (70.75%), Postives = 273/335 (81.49%), Query Frame = 0 
Query:    2 TRSISGNVFAFWSILIYITIVGRGDANDSSDLDNPLELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGD 336
             R+  G   AF S L  I  +       S++    LE  D++P++ KLYDKMRPPK  G AT V FHVTVM LD+IDE+SMTY  D+FFAQ+WKDNRLRLP+NMTSEYRLL ++WL  +WRPDSFFKNAKSVTFQTMTIPNHY+WL+KDKTILYMVKLTL LSC M+F  YPHDTQ C L++ES+SHTTD++IF WDP +PL VD+ IELPQL+L+     DCT  YSTG FTCLEVVF+ KRRLGYYLFHTYVPTCLIVIMSW+SFWIKPEA PARVTLGVTSLLTLSTQHA SQ SLPPVSY+KA+D FMS CT+FVF++LMEY LVNIV+GD
Sbjct:    4 ARAGGGMYSAFVSSLFLIFFL-----TTSAEAQRSLEFFDLLPEDPKLYDKMRPPKKDGQATVVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDNRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWDPDVPLVVDENIELPQLQLVKNYTADCTQVYSTGNFTCLEVVFVLKRRLGYYLFHTYVPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTIFVFMALMEYCLVNIVLGD 333
The following BLAST results are available for this feature:
BLAST of glycine receptor subunit alpha-3-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25
Match NameE-valueIdentityDescription
EMLSAG000000112112.019e-2426.37supercontig:LSalAtl2s:LSalAtl2s765:133774:155316:1... [more]
EMLSAG000000011133.611e-2427.16supercontig:LSalAtl2s:LSalAtl2s1186:160345:169896:... [more]
EMLSAG000000033136.070e-2425.16supercontig:LSalAtl2s:LSalAtl2s181:399664:401012:-... [more]
EMLSAG000000084556.178e-2426.47supercontig:LSalAtl2s:LSalAtl2s519:173869:181393:1... [more]
EMLSAG000000091373.657e-2326.52supercontig:LSalAtl2s:LSalAtl2s575:53505:62115:1 g... [more]

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BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|66774025|sp|Q91XP5.2|GLRA3_MOUSE2.054e-8541.14RecName: Full=Glycine receptor subunit alpha-3; Fl... [more]
gi|121580|sp|P24524.1|GLRA3_RAT2.309e-8541.16RecName: Full=Glycine receptor subunit alpha-3; Fl... [more]
gi|116242496|sp|O75311.2|GLRA3_HUMAN9.504e-8540.84RecName: Full=Glycine receptor subunit alpha-3; Fl... [more]
gi|12230887|sp|P07727.4|GLRA1_RAT1.972e-8139.63RecName: Full=Glycine receptor subunit alpha-1; Al... [more]
gi|12644459|sp|Q64018.2|GLRA1_MOUSE2.741e-8139.63RecName: Full=Glycine receptor subunit alpha-1; Al... [more]
gi|66774003|sp|Q7TNC8.1|GLRA2_MOUSE4.099e-8144.56RecName: Full=Glycine receptor subunit alpha-2; Fl... [more]
gi|121578|sp|P23416.1|GLRA2_HUMAN4.558e-8144.56RecName: Full=Glycine receptor subunit alpha-2; Fl... [more]
gi|12644526|sp|P57695.1|GLRA1_BOVIN4.709e-8139.57RecName: Full=Glycine receptor subunit alpha-1; Al... [more]
gi|121579|sp|P22771.1|GLRA2_RAT5.123e-8144.56RecName: Full=Glycine receptor subunit alpha-2; Al... [more]
gi|116242495|sp|P23415.2|GLRA1_HUMAN8.533e-8139.57RecName: Full=Glycine receptor subunit alpha-1; Al... [more]

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BLAST of glycine receptor subunit alpha-3-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|780707119|ref|XP_011703491.1|4.914e-17174.92PREDICTED: glycine receptor subunit alpha-3 isofor... [more]
gi|1059231852|ref|XP_017761064.1|4.980e-17174.92PREDICTED: glycine receptor subunit alpha-2 isofor... [more]
gi|1153840138|ref|XP_020296883.1|5.039e-17174.59glycine receptor subunit alpha-3 isoform X1 [Pseud... [more]
gi|826411623|ref|XP_012542850.1|5.693e-17174.59PREDICTED: glycine receptor subunit alpha-3 isofor... [more]
gi|1000718471|ref|XP_015599519.1|6.415e-17170.75PREDICTED: glycine receptor subunit alpha-2 isofor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1121_size61474supercontigscaffold1121_size61474:37906..42882 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1121_size61474-snap-gene-0.22-mRNA-1maker-scaffold1121_size61474-snap-gene-0.22-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1121_size61474:37906..42882-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1121_size61474-snap-gene-0.22 ID=maker-scaffold1121_size61474-snap-gene-0.22|Name=glycine receptor subunit alpha-3-like|organism=Tigriopus kingsejongensis|type=gene|length=4977bp|location=Sequence derived from alignment at scaffold1121_size61474:37906..42882- (Tigriopus kingsejongensis)
CAGCGTCCTCGGTATTTAGTTCCAAGCCTAAGCGGGACCGCATTTAGTCG
GTCTAGGATAGTCGTTGGTTGTACAGCCAAGAAGAGCAACCTCCCGCTTT
AATCCCAGGAGCAGTGCCCAGGGTCTGGGCCCAAGAAGCAGCTGTGAGGC
CACTTCACGTTCCACCAGCGTCGGCCAGGTCGCCAGAAAGAGGAAGGAAA
GTCTTGACTTTCAGACCATTCTGGTAGTGGCGGAACACAAGCTTTCCATT
ACTCAAGGATACTTAGTAGACTAGTGCTGCAGCAGCCAAGATTCTTCCAT
TTCCAAAATGACGAGGTCAATCTCGGGCAATGTATTTGCCTTTTGGAGCA
TACTGTAAGTGAACCATATTAGCCCACAATTCGCTCGTTGTGATGGGCTG
CGTTTAGCTGGTGACAGCGTTGATTTTAATCCAATCATTCGGGCTTAATG
GTAATCGGAGAGGCACTTTCAAGTGGCCTTGGGCCTGAGTGACGATAAAA
CCTTGAGCTGTCACTCGCTTCAATTGCGCTCCGTATGACCAAAATGCCCC
TCCAATGACAAGATTCTATCTCCATTCCAGGATCTACATCACCATCGTGG
GAAGGGGCGATGCCAACGATAGCAGTGACTTGGACAACCCCTTGGAGTTG
GGCGACATCATGCCCCAGAACAGGAAACTCTACGACAAGATGAGGCCTCC
CAAATATAAAGGTACCTACACCAGCCTCGAATGCACCCATCGCGACCGCT
GAGGGATTCCTGTGCCAGTGATACACGTACATGGTGGTACCTAATCTGTC
ATGTCACCGATGCAGCGATACAGACAATCATCCATGCCAAAAACTCGTTC
GTCAGTGGGACTGACGAACAAGTTGGACTCGAGATGCTCAGATAGTGTCT
CGAGTGCGTCCATGTCATCCGGCACGTCCAAAATGGCCAATTTGGGACCC
TTGAGAGGGTCCACCTGGGCCAGCATGGGCTGCCACCCCTCATGATGGAT
GGGAGAGGCCAGGAAAATCTGGAATTCATGGGGCAATTTGTGTCAGAGCC
CACTAACAAGGGTTATTTTGAGTCGTTCCGAGCTGGTTGGGTGGAAAAAA
ACTCTTTTCCAATGGAAGCTGCTACTTGGGCGCTGCCTGAGCTACGCGCC
GAGTGTGGGGACCAGGTCAGCTCAAACCTAATGAGATGGTTTAAGTGTTT
ACTCCCATTTTCTGCTGGCTTTTTGCCCTCTTCCCCTTTCATGGGGTCTG
CTCGCGAGGAGTAATTTGAACGTGTCCAACAAATGCATGGTGGGATTTGA
ATCCGCCTCTCCAGAAGCCGCCGCGATGGTGGCCACTTCTGACGACGGGC
TCTAGCTGGGAAGGATGTCGCGGACTGGCTGCCGTGAATGTCTTTCTGCT
GGTCAGGGAAGTTTTTGGAATTCTTTTGAAGCTTCCTCGAGTGGCTTTGT
GACGGGAACATGAGAGCCGTGTTCCGTCGACTCGCCAGATCGACGCACGC
ATCCAAATTTGGACTTGATCCTATTGTGAATTGAAACGATACAACCACCA
CTCACGGTCGATCTGTCGAGTACATGCACGTTGCCAGATCAAGGAGGATT
GACAGAGACAAAGAGAGAAAACAAAGGCCTGGGGCAATCTGAACGCCACT
GGTTCATGAGCCGGGAAGAAAAATAATCGAGTTCAAAGTTCACAACCGGT
CCTTTAAACACACGCTCACACACACGTCGTTTACGTTGGCAGTATTGCTC
GAAATGCACATGCTATAACGTCACCCACTACTTTTTAGGCAACGCTACCG
AAGTCAATTTCCACGTCACCGTCATGAGTTTGGACACAATCGACGAGAGT
TCCATGGTATGATTCACTTACATTTCCTCCGCCAAGTGCAGCATTGTCCA
TTTATCCATTTACGATGGTCTGGGGGGTTGTTGGGAGCACACAAAGTGGG
GCGGCATTGGCTCTCCCAGCCTAGACCCAACAATGACCAAACATCTCCCG
GCACGATTGCGCTCAAAGTCGGGACCGAAGTGAGCTCCTGAAGCCCGCTC
GTTTAATCCTTTTGTTTACGACATTGCAGACCTACACCTGTGATGTATTT
TTCGCTCAAAGTTGGAAAGACAATAGGCTCCGACTACCGGACAATATGAC
GTCCGAGTATCGCCTTCTGCCCATCGAGTGGCTCACCGAGATCTGGAGAC
CCGACTCGTTCTTCAAGAATGCCAAGAGTGTCACCTTCCAGACCATGACC
ATCCCAAATCATTACATTTGGCTCTGGAAAGACAAAACCATTCTTTACAT
GGTCAAGTGAGTCGAGAACGTCCCATGCCTCCAGTCGTATCTGTCCATGG
TGACACATGTCCACACGCGAACGTTCATCTTGATTTGATCCCACAGGTTG
ACGCTCGTCCTATCTTGTCCCATGCATTTCAAGAACTATCCCCACGACAC
CCAATCGTGTAATCTGGAAATTGAGAGCAGTAAGTCCAGCTCCAGCTCCA
TCCTATCAGTTTGAGGTCCTTGTGTCAGATGACAATCCCAACTTCATCCC
CATTTCTAGTTTCTCACACCACGGACGATCTGATATTTATCTGGGACCCT
CAAATTCCACTCGACGTCGACAAAGGCATCGAGTTGCCTCAATTGGAGCT
CATATCAACCAAAAATGACGACTGTACCACCGAGTACTCAACTGGTAAGG
CTCACCCAACCCTTAAAGTGGTTCCTAAATGGTGGTTTGACTCCGGTTGT
CGTGTTGCAGGAAAGTTCACGTGCCTCGAGGTGGTGTTCATGTTCAAGCG
CCGCTTGGGCTACTATCTCTTCCACACCTACGTTCCCACTTGCCTCATCG
TCATCATGTCATGGATCTCGTTCTGGATCAAGCCCGAGGCCGTGCCCGCC
AGAGTGACTCTGGGCGTAACCAGTCTCCTTACCCTCTCCACCCAACATGC
CAATAGCCAAAAGTCGCTTCCACCCGTGTCCTATATTAAAGTAAGTCGAG
CACTTAAGAGCCCGAAATGGAGCCTATAAGCTGACTGAGGGTCCAATAAA
ACAACTTTTATGTCTGCCTCTAATTCTATTCCAGGCCATCGATGTGTTCA
TGTCTGGTTGCACTGTCTTTGTGTTCTTATCTTTAATGGAGTATGCCCTG
GTGAACATTGTGATGGGCGATATCGCTGATATTGAGAAGAAAAAGTCCAT
GGGGATCAGCAACCTCATCTTGGGAACGCGAGGGATCCAGTTGAAGAAAA
CAGATCGCGAGTTTGCTTACGACAATGAGGGCAATGTGAGTGCTTGTTAA
CATCCCAGGTTGATTTAATCATACATAGCTGGTCGCCCATCGGTTGTGAA
GCGCCGCTACACCTTTTTTCATAAGCCACGGACTCTGTTGTTGGCCAATG
TCATGTTGGATAATGAATATCTGCTCATTCTCGCACACTTTGCCATTTGT
AGGTCCAAATGTCGACCGTGCTCAACGAGCATCCGCGACAGGGAGAGAGA
AAATACACCGATGACTTCATCGGAGAGTCGGACCCCACCTTGGACGACGG
CTCCTACAATGCCTCCCATCACCAGACGCCTCTGGACTCGCACCTCTTGG
CCCCCCAAGAATGTGTCCATTCCCGCTCTCGGATGCATAGTGGGGACTCG
ATTTACGACACATCGAAGGACCATCACCATCGCAAACAGCGAATGATGGG
CATGGACCAGGAGGGCGGCATGAATGGAGATTATAATCCCTCCAACCCAC
TCCTCCCAGCTGAGCTGGGTCGATACAACCCCAATAGTGGAAAAGTGCCC
CCACCTCCACCCCCACCCATCAACAATCACTTGGCCACCGTGTCCAACAA
TGTGCTCAGCCAGCAAGGCATCAAGAACTTGGTGCACGATGTGCAGATGA
AACGCCAAAAGGAGATTCGAGACATGATGAAGAAGAAACGCGAGAAGGCC
GTGCTGGTGGACCGCATCTCTCGTTGGCTCTTCCCGACTAGCTTCATCCT
GCTCAATATTGTGTACTGGGCTCTCTTTGGAGATCACGACTTGTGGTGAT
TTCCCGGACGACGAACAGAAGATCGGAAGAAAGCGAGCCCACCTGGGCAG
CTTTTGTGCTCCCTTGATATGCTAGGTGTATGCTAATGGATTGTTTGTTA
GGGTTGACTGAACATCAGTGCTGATTTCGTTCCCACAAATTTAGACCTGA
TTCGCTCATGTGGCTCCTCATTTACATAGACAACCCGCCAGGTTATGATG
TGTTCGGTGATAATAATGCTAATGGTGGGATTCGACCATGGCGATGTTCC
ACTCGCACCTCACGGGCAATGATGGGCTTGAACTGGCACGAGGCTTCAAG
TGCTTCTCGACTCCCAATGCGCTCAATCACTGTGAGCCGTCTTGGGTGAT
TCCCGTCCTGTGTCAAGGTTGAGTGAGAAACCTTCGCCGTTTTGAATTGA
TGACGTTCATGGATTTGGCTATTGCGTTTGACTTAGAACTAGTCGCAACT
GTACAAGTTACGCTACAAGTTATGTTTTGCCTCCCCAAAATGACCAATTA
AGATCGTCTGTTGATTTAATTGTTTGTAACTCAGTTCCTTGGGTTATTAT
TTGTAGGAACGAATTTTCCCCAGGCAATCCATTGGCTTACCTTTTGCACC
TAAGGTACATACGTATACGGGATCAAATCTATAGATTATACCCAAAACCC
ATTAGCTAAGGGCAAAATGGGGGCTTTGCCACTCCTCAATATGGAATGTC
AGGATTGCCACCCAAAGCTGCCTAACCAAGGGGGGTGGACATTGCCGCAA
TTTGCCCATGGCTAATTTGTAATCAAGATTCGTCACTACCCAGAGGTTAT
TTTACATATATTTCTATACACTACCGAAATTAAGCAGCAATCATAAGGTT
ACCTCACCCCTCTCCATCAATTGAACTTAACTCACACAGATATGCATGCC
CTTCCATGGCCAAATGAAAGAAATACA
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Synonyms
The feature 'glycine receptor subunit alpha-3-like' has the following synonyms
Synonym
Tk07067
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