glycine receptor subunit alpha-3-like, maker-scaffold1121_size61474-snap-gene-0.22 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of glycine receptor subunit alpha-3-like vs. L. salmonis genes
Match: EMLSAG00000011211 (supercontig:LSalAtl2s:LSalAtl2s765:133774:155316:1 gene:EMLSAG00000011211 transcript:EMLSAT00000011211 description:"maker-LSalAtl2s765-snap-gene-1.16") HSP 1 Score: 103.219 bits (256), Expect = 2.019e-24 Identity = 72/273 (26.37%), Postives = 122/273 (44.69%), Query Frame = 0 Query: 89 FFAQSWKDNRLRLPDNMT--SEYRLLPIEW-------LTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISH---------TTDDLIFIWDPQIPLDVDKGIELPQLELISTKN---------DDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVM 334 +F SW D RL++ + + SE R P L IW P+ + Q + + + K+KTI Y + + + +SC M F +YP D +C ++ S + +T L+ +D + Q+ S ++ D + +G + R+ YL Y+P+C+ V+ SW+SF IKPE VP R+ L VT L L + ++ P S + AID+++ C VF +LMEYA++ +++ Sbjct: 1 YFGVSWLDPRLKINSSASEWSEARTGPKNEVNISPGSLRYIWYPELEIYGLEKFGRQRVLKEMSGVRIRKNKTIHYELGVRITISCRMMFDDYPLDAHTCQFQVGSCKYQDITRPWGKSTYQLLSDYDSNKTVQCSSSYVYDQIRQRSLQHYITFEELPEKDRSVVLPSGTYAACGFQIQLVRKQMQYLVQVYLPSCMFVVTSWVSFLIKPEVVPGRMALLVTLFLVLINIFNSVRERAPISSKLNAIDLYLVVCIFLVFGALMEYAVILLLL 273
BLAST of glycine receptor subunit alpha-3-like vs. L. salmonis genes
Match: EMLSAG00000001113 (supercontig:LSalAtl2s:LSalAtl2s1186:160345:169896:1 gene:EMLSAG00000001113 transcript:EMLSAT00000001113 description:"maker-LSalAtl2s1186-snap-gene-1.38") HSP 1 Score: 105.531 bits (262), Expect = 3.611e-24 Identity = 85/313 (27.16%), Postives = 143/313 (45.69%), Query Frame = 0 Query: 44 PQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYR------------LLPI--EWLTEIWRPDSFFKNAKSVTFQTMTIPNHY--IWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWD------PQ----IPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALV 330 P+N Y K P KG + + + + I++ + T +F W+++R+ L + E ++P+ E++ ++W PD F + K T++ M + N +W+ DKTILY + CPM F +P DTQ C ++ S S+ + F+ + P+ I LD D Q++++S K D G F+ + R + Y+ Y+P+ L VI+SWISF I + +P R+ L VT L L + P + AI+ +M C +FVF +L+EY + Sbjct: 68 PRN---YSKFDLPVKKG-VNHITVSIDIAEVLRINDKDYSITFSGYFNVKWQESRIELSPDFGEEVAGPGVNTTNNPNIVVPMSTEFVKDVWMPDIFIYSLK--TYKVMDVLNKLAGLWIGADKTILYSQATHITFICPMRFDKFPLDTQVCKFQVGSCSYDDTKMRFMTENAGYQSPKTANSIALDYDI-----QIKMLS-KEDQVFLGGGLGNFSLAGFELVLHRYVSTYIITYYLPSGLFVIVSWISFLIPMDVIPGRMALLVTLFLVLVNIFNTVTTNTPKAEGLTAIEAWMLACILFVFGALIEYXAI 368
BLAST of glycine receptor subunit alpha-3-like vs. L. salmonis genes
Match: EMLSAG00000003313 (supercontig:LSalAtl2s:LSalAtl2s181:399664:401012:-1 gene:EMLSAG00000003313 transcript:EMLSAT00000003313 description:"maker-LSalAtl2s181-augustus-gene-4.10") HSP 1 Score: 103.605 bits (257), Expect = 6.070e-24 Identity = 77/306 (25.16%), Postives = 139/306 (45.42%), Query Frame = 0 Query: 43 MPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLP----------IEWLTEIWRPDSFFKNAKSVTFQTMTIPNHY--IWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIP-------LDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYAL 329 +P+N Y K P + +AT + V + + I++ + T + +F W D RLR+ +S+ P + + ++W D N S F+T+++ + +W+ ++ ++Y + + + C M F +P D Q C ++ S ++ + +IF D IP +D + L T YS F + R++ +Y+ Y+P+ L V++SWISF + PE +P R+TL VT L L Q + P + AI+ ++ C +FVF +L EY + Sbjct: 37 LPKN---YAKYELPD-EDSATPIIVGVDIKDIPKINDVDFSITLNAYFYVKWVDKRLRILSYNSSDINRKPHMKKQSIAINSKIIEKLWLXDVEILNLSS--FETLSVLSKLEGVWIGENSELMYSLATRITIICRMKFNAFPMDIQVCKFQVGSFNYDMNKMIFFND-FIPSKQNSQQTTLDYQVNFQDLRPDETHYLALGMNYSVAGFQII-----LTRKVSFYIVTYYLPSALFVLVSWISFLVNPEVIPGRMTLLVTIFLVLINIFNTIQTNSPKADGLTAIEAWVIACIIFVFGALGEYTV 330
BLAST of glycine receptor subunit alpha-3-like vs. L. salmonis genes
Match: EMLSAG00000008455 (supercontig:LSalAtl2s:LSalAtl2s519:173869:181393:1 gene:EMLSAG00000008455 transcript:EMLSAT00000008455 description:"snap_masked-LSalAtl2s519-processed-gene-1.11") HSP 1 Score: 102.064 bits (253), Expect = 6.178e-24 Identity = 72/272 (26.47%), Postives = 126/272 (46.32%), Query Frame = 0 Query: 68 HVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLW--KDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQI--PLDVDKGIELPQLELISTKNDDCTTEYS-TGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVM 334 H+ V+ + +D+ + T +++F W +NRL TS + + ++++ +W P+ F N V+F + LW + K + Y + CPM F +P D SC + S ++ ++F ++ PL + ++ ++++ K D Y TG ++ R + YL+ Y+P+ L V +SW+SF I P+ VP R+ L VT L L P V + AI +M C FVF +L+ YA + V+ Sbjct: 2 HLEVLDVLRVDDKKFSVTLNMYFGVRWTENRLTKMTPGTSSWIPIDMDFMNYLWVPNVFVYNL--VSFHALDCLKKLAGLWVAEGKDLFYNQATHVTFMCPMRFNKFPLDQHSCKFLVGSTNYDMTRMLFDYNTLSYDPLSGNTILDY-RIQIKPLKTADRIINYGETGNYSLTGFEMTLTRNMAKYLYIYYLPSGLFVGVSWVSFLIPPDVVPGRMALLVTLFLVLINIFNTITNVSPNVEGMXAISSWMIACMFFVFGALLGYAAILYVL 270
BLAST of glycine receptor subunit alpha-3-like vs. L. salmonis genes
Match: EMLSAG00000009137 (supercontig:LSalAtl2s:LSalAtl2s575:53505:62115:1 gene:EMLSAG00000009137 transcript:EMLSAT00000009137 description:"maker-LSalAtl2s575-augustus-gene-0.8") HSP 1 Score: 102.834 bits (255), Expect = 3.657e-23 Identity = 70/264 (26.52%), Postives = 128/264 (48.48%), Query Frame = 0 Query: 48 KLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEI-----WRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLE-LISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSY 305 K Y M P KG+ VN + + ++ ++E T + W+D R+ P N S++ I + +I W PD F AK+ + + +K++ + +++ + C M F YP+D Q C++ +ES + DD+ WD + ++ I L Q LI K D ++ ++ ++ L + +R + Y++ T++P+ + VI+ WIS ++ P+A+P RV + + SLLT + + S P VSY Sbjct: 32 KDYSVMEGPHNKGSPLHVNISINLRNIFEVNEKLSLITVETSIRMIWQDPRI-YPTNNGSDWDFDFITFNGKIVKRKFWIPDVFIDGAKNARIPKYHLQPMSLRYYKNRNLRLSLRINFDVICQMDFHKYPNDEQLCDIPLESWDTSMDDMKLNWDLSNSV-INPNITLDQFSPLIYFKKYDTQSDMTS--YSGLIIRIQLQRLIPYHVIQTFIPSIVFVILGWISLFLDPQAIPGRVKMVMLSLLTSLAMFNSVRDSTPQVSY 291
BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Match: gi|6647527|sp|O93430.1|GLRA1_DANRE (RecName: Full=Glycine receptor subunit alphaZ1; Flags: Precursor) HSP 1 Score: 261.151 bits (666), Expect = 6.688e-80 Identity = 128/299 (42.81%), Postives = 185/299 (61.87%), Query Frame = 0 Query: 36 PLELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKN-DDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIV 333 P E D + YD P +KG V ++ + S +I E++M Y ++F Q W D RL + L P L IW+PD FF N K F +T N + + K+ +LY +++TLVL+CPM KN+P D Q+C +++ES +T +DLIF WD + + V G+ LPQ L K+ CT Y+TGKFTC+E F +R++GYYL Y+P+ LIVI+SW+SFWI +A PARV LG+T++LT++TQ + S+ SLP VSY+KAID++M+ C +FVF +L+EYA VN + Sbjct: 34 PSEFLDKLMGKVSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLDLDP-SMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFI 331
BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Match: gi|78099775|sp|Q61603.3|GLRA4_MOUSE (RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor) HSP 1 Score: 259.996 bits (663), Expect = 2.722e-79 Identity = 127/286 (44.41%), Postives = 183/286 (63.99%), Query Frame = 0 Query: 50 YDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIP-LDVDKGIELPQLELISTKN-DDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIV 333 YD P +KG V ++ + S ++ E++M Y +VF Q W D RL + L P L IW+PD FF N K F +T N + ++K+ +LY ++LTL+LSCPM KN+P D Q+C +++ES +T +DL+F W P + V +G+ LPQ L K+ CT Y+TGKFTC+EV F +R++GYYL Y+P+ LIVI+SW+SFWI +A PARV LG+T++LT++TQ + S+ SLP VSY+KAID++M+ C +FVF +L+EYA VN V Sbjct: 57 YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDLDP-SMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFV 341
BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Match: gi|262527577|sp|Q5JXX5.3|GLRA4_HUMAN (RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor) HSP 1 Score: 255.758 bits (652), Expect = 3.448e-78 Identity = 125/286 (43.71%), Postives = 182/286 (63.64%), Query Frame = 0 Query: 50 YDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIP-LDVDKGIELPQLELISTKNDDCTTE-YSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIV 333 YD P +KG V ++ + S +I +++M Y +VF Q W D RL + L P L IW+PD FF N K F +T N + ++K+ +LY ++LTL+LSC M KN+P D Q+C +++ES +T DL+F W P + V +G+ LPQ L K+ C T+ Y+TGKFTC+EV F +R++GYYL Y+P+ LIVI+SW+SFWI +A PARV LG+T++LT++TQ + S+ SLP VSY+KAID++M+ C +FVF +L+EYA +N V Sbjct: 58 YDARIRPNFKGPPVNVTCNIFINSFSSITKTTMDYRVNVFLRQQWNDPRLSYREYPDDSLDLDP-SMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCLMDLKNFPMDIQTCTMQLESFGYTMKDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGCCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAINFV 342
BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Match: gi|62901525|sp|Q94900.2|GLUCL_DROME (RecName: Full=Glutamate-gated chloride channel; Short=DrosGluCl; Flags: Precursor) HSP 1 Score: 246.128 bits (627), Expect = 5.883e-74 Identity = 128/331 (38.67%), Postives = 196/331 (59.21%), Query Frame = 0 Query: 7 GNVFAFWSILIYITIVGRGDANDSSDLDNPLE---LGDIMPQNRKLYD-KMRPPKYKG--NATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVN 331 G+ FW+IL + ++ AN++ E L I+ + YD ++RP G V ++ V S+ TI + M Y+ + F + W D RL+ D++ + L + +W PD FF N K F + +PN YI ++ + ++LY ++++L L+CPM+ K YP D Q C+L + S TT+DL+F+W P+ V K + LP+ L D C ++ +TG+++CL+V +FKR YYL Y+P C++VI+SW+SFW+ AVPARV+LGVT+LLT++TQ + SLPPVSY KAIDV+ C FVF +L+E+ALVN Sbjct: 2 GSGHYFWAILYFASLCSASLANNAKINFREKEKKVLDQILGAGK--YDARIRPSGINGTDGPAIVRINLFVRSIMTISDIKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVN 329
BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Match: gi|75067361|sp|Q9GJS9.1|GLRB_BOVIN (RecName: Full=Glycine receptor subunit beta; AltName: Full=Glycine receptor 58 kDa subunit; Flags: Precursor) HSP 1 Score: 237.654 bits (605), Expect = 2.425e-70 Identity = 164/553 (29.66%), Postives = 258/553 (46.65%), Query Frame = 0 Query: 22 VGRGDANDSSDLDNPLELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLP-DNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKND----DCTTEY-STGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGDIADIEKKKSMGISNLILGTRGIQLKKTDREFAYDNEGNVQMSTVLNEHPRQGERKYTDDFIGESDPTLDDGSYNASHHQTPLDSHLLAPQECVHSRSRMHSGD-SIYDT-SKDHHHRKQRMMGMDQEGGMNGDYNPSNPLLPAELGRYNPNSGKVPPPPPPPINNHLATVSNNVLSQQGIKNLVHDVQMKRQKEIRDMMKKKREKAVLVDRISRWLFPTSFILLNIVYWALF 566 + R AN +S++ N L + YD P +KG +V ++ + S +I E++M Y ++F Q W D RL+LP D S+ + +W+PD FF N KS F +T N +++++D +L ++L++ LSCP+ +P DTQ C +++ES +TTDDL FIW P+ ++K I LPQ ++ K D +CT Y TG +TC+EV+F +R++G+Y+ Y PT LIV++SW+SFWI P+A ARV LG+ S+L+L+++ LP VSY+KA+DV++ C +F F SL+EYA+V +++ + +E +K+ + E A GNV +N G S P H + L ++ S+S + S D SI + +D G E NG LG+ + K PPP P V KR +D +R LFP F+ N++YW+++ Sbjct: 48 LARVPANSTSNILNRLLVS---------YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEK-IALPQFDI--KKEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRVEAEKA---------------RIAKAEQAVGKGGNVAKKNTVN---------------GASTPV----------HISTLQVGETRCKKVCTSKSDLRSNDFSIVGSLPRDFELSNYDCYGKPIEVN-NG------------LGKSQAKNNKKPPPAKP----------------------VIPTAAKR-----------------IDLYARALFPFCFLFFNVIYWSIY 496
BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Match: gi|704000349|sp|G5EBR3.1|GLUCL_CAEEL (RecName: Full=Glutamate-gated chloride channel alpha; AltName: Full=Avermectin-sensitive glutamate-gated chloride channel GluCl alpha; AltName: Full=GluCl alpha; Flags: Precursor) HSP 1 Score: 235.343 bits (599), Expect = 7.915e-70 Identity = 115/297 (38.72%), Postives = 178/297 (59.93%), Query Frame = 0 Query: 50 YD-KMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIE--LPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGDIADIEKK 343 YD ++RPP G V+ ++ + ++ ID +M Y+ + +SW D RL + + + +IW PD+FF N K T+ PN I + D T+LY V+++LVLSCPM+ + YP D Q C++++ S ++TT D+ ++W PL + G+ LP +L +T CT+ +TG ++CL KR +YL Y+P+C++VI+SW+SFW A+PARVTLGVT+LLT++ Q A LPPVSYIKAIDV++ C F+F +L+E+ALVN + + +E+K Sbjct: 75 YDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESWIDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLWKEHSPLQLKVGLSSSLPSFQLTNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALLEFALVNHI-ANKQGVERK 370
BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Match: gi|1730183|sp|P50571.1|GBRB1_MOUSE (RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1; AltName: Full=GABA(A) receptor subunit beta-1; Flags: Precursor) HSP 1 Score: 235.343 bits (599), Expect = 1.102e-69 Identity = 140/402 (34.83%), Postives = 221/402 (54.98%), Query Frame = 0 Query: 27 ANDSSDLDNPLELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLR---LPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWD--PQIPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGDIADIEKKKSMGISNLILGTRGIQLKKTDREFAYDNEGNVQMSTVLNEHPRQGERKYTDDFIGESDPTLDDGSYNAS--HHQTPLDSH 421 A+ S++ N + + + + K YD P + G +V + V S+D + E +M YT ++F QSWKD RL +P N+T + R+ ++W PD++F N K +T+ N I L D T+LY +++T +C M + YP D Q+C LEIES +TTDD+ F W+ V+K IELPQ ++ K E++TG + L + F KR +GY++ TY+P+ LI I+SW+SFWI +A ARV LG+T++LT++T + +++LP + Y+KAID+++ GC VFVFL+L+EYA VN + +K S + R +++ K D GN+ +ST+ + G T G SDP SY+++ ++ PL S Sbjct: 25 AHSSNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNK-IELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQKKGASKQDQSANEKNR-LEMNKVQ----VDAHGNILLSTLEIRNETSGSEVLT----GVSDPKATMYSYDSASIQYRKPLSSR 411
BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Match: gi|1346173|sp|P48167.1|GLRB_HUMAN (RecName: Full=Glycine receptor subunit beta; AltName: Full=Glycine receptor 58 kDa subunit; Flags: Precursor) HSP 1 Score: 235.728 bits (600), Expect = 1.219e-69 Identity = 123/330 (37.27%), Postives = 198/330 (60.00%), Query Frame = 0 Query: 22 VGRGDANDSSDLDNPLELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLP-DNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKND----DCTTEY-STGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGDIADIEKKKS 345 + R AN +S++ N L + YD P +KG +V ++ + S +I E++M Y ++F Q W D RL+LP D S+ + +W+PD FF N KS F +T N +++++D +L ++L++ LSCP+ +P DTQ C +++ES +TTDDL FIW P+ ++K I LPQ ++ K D +CT Y TG +TC+EV+F +R++G+Y+ Y PT LIV++SW+SFWI P+A ARV LG+ S+L+L+++ LP VSY+KA+DV++ C +F F SL+EYA+V +++ + +E +K+ Sbjct: 48 LARVPANSTSNILNRLLVS---------YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEK-IALPQFDI--KKEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRVEAEKA 365
BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Match: gi|120769|sp|P15431.1|GBRB1_RAT (RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1; AltName: Full=GABA(A) receptor subunit beta-1; Flags: Precursor) HSP 1 Score: 234.187 bits (596), Expect = 2.348e-69 Identity = 139/402 (34.58%), Postives = 220/402 (54.73%), Query Frame = 0 Query: 27 ANDSSDLDNPLELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLR---LPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWD--PQIPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGDIADIEKKKSMGISNLILGTRGIQLKKTDREFAYDNEGNVQMSTVLNEHPRQGERKYTDDFIGESDPTLDDGSYNAS--HHQTPLDSH 421 A+ S++ N + + + + K YD P + G +V + V S+D + E +M YT ++F QSWKD RL +P N+T + R+ ++W PD++F N K +T+ N I L D T+LY +++T +C M + YP D Q+C LEIES +TTDD+ F W+ V+K IELPQ ++ K E++TG + L + F KR +GY++ TY+P+ LI I+SW+SFWI +A ARV LG+T++LT++T + +++LP + Y+KAID+++ GC VFVFL+L+EYA VN + +KK + +++ K D GN+ +ST+ + G T G SDP SY+++ ++ PL S Sbjct: 25 AHSSNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNK-IELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGP-QKKGASKQDQSANEKNKLEMNKVQ----VDAHGNILLSTLEIRNETSGSEVLT----GVSDPKATMYSYDSASIQYRKPLSSR 411
BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Match: gi|120766|sp|P08220.1|GBRB1_BOVIN (RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1; AltName: Full=GABA(A) receptor subunit beta-1; Flags: Precursor) HSP 1 Score: 234.187 bits (596), Expect = 3.117e-69 Identity = 142/422 (33.65%), Postives = 226/422 (53.55%), Query Frame = 0 Query: 27 ANDSSDLDNPLELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLR---LPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWD--PQIPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGDIADIEKKKSMGISNLILGTRG-IQLKKTDREFAYDNEGNVQMSTVLNEHPRQGERKYTDDFIGESDPTLDDGSYNAS--HHQTPLDSH----LLAPQECVHSRSRMH 436 AN+ S++ E D + + YD P + G +V + V S+D + E +M YT ++F QSWKD RL +P N+T + R+ ++W PD++F N K +T+ N I L D T+LY +++T +C M + YP D Q+C LEIES +TTDD+ F W+ V+K IELPQ ++ K E++TG + L + F KR +GY++ TY+P+ LI I+SW+SFWI +A ARV LG+T++LT++T + +++LP + Y+KAID+++ GC VFVFL+L+EYA VN + +KK G + + +++ K D GN+ +ST+ + G T G DP SY+++ ++ P+ S + HS+ R+ Sbjct: 28 ANEPSNMSYVKETVDRLLKG---YDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNK-IELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIF--FGKGPQKKGAGKQDQSANEKNKLEMNKVQ----VDAHGNILLSTLEIRNETSGSEVLT----GVGDPKTTMYSYDSASIQYRKPMSSREGYGRALDRHGAHSKGRIR 430
BLAST of glycine receptor subunit alpha-3-like vs. nr
Match: gi|1325319051|ref|XP_023341296.1| (glycine receptor subunit alpha-4-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 672.159 bits (1733), Expect = 0.000e+0 Identity = 356/543 (65.56%), Postives = 406/543 (74.77%), Query Frame = 0 Query: 34 DNPLELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGDIADIEKKKSMGISNLILGTRGIQLKKTDREFAYDNEGNVQMSTVLNEHPRQGERKYTDDFIGESDPTLDDGSY----NASHHQTPLDSHLLAPQECVHSRSRMHSGDSIYDTSKDHHHRKQRMMGMDQEGGMNGDYNPSNPLLPAELGRYNPNSGKVPPPPPPPINNHLATVSNNVLSQQGIKNLVHDVQMKRQKEIRDMMKKKREKAVLVDRISRWLFPTSFILLNIVYWALFGDHDLW 572 D+PLEL DI+P++ K+YDKMRPPK +GNAT+V FHVTVMSLDTIDESSMTYTCD+FFAQSWKD RLRLPDNMTSEYRLLP+EWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWL++DK+ILYMVKLTLVLSC M+FKNYPHD Q CNL+IESISHTTDDL+F WDP +PLDVD GIELPQLEL DCTT YSTG FTCLEVVFMFKRRLGYYLFHTY+PTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVN+VMGDIADIEKKKS+GIS++++ +R L T N+ + ++ ++ E R+ E++ D+ +G +GS N SH C+H ++ SIY++ K ++ E G + + +P LP + I N T+ IK D KRQKEIRD+MKK+REKAVLVDRISRWLFPTSFILLNIVYWALFGDHDLW Sbjct: 43 DDPLELNDILPRHNKIYDKMRPPKREGNATKVFFHVTVMSLDTIDESSMTYTCDIFFAQSWKDFRLRLPDNMTSEYRLLPVEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLYQDKSILYMVKLTLVLSCAMNFKNYPHDEQICNLKIESISHTTDDLVFEWDPIMPLDVDSGIELPQLELTHNFTGDCTTAYSTGNFTCLEVVFMFKRRLGYYLFHTYLPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNVVMGDIADIEKKKSVGISSILMNSRSPGLHLTPP----INQEKI-LADLMQEQDRK-EQEQADNGMGFYSEMKLEGSMESDTNGSH--------------CLHRSVQLGPHRSIYNSK-----LKDELL----EKG-HPQISKHSPFLPPPPPPPH------------YIKNQYPTI---------IKANPQDAHAKRQKEIRDLMKKRREKAVLVDRISRWLFPTSFILLNIVYWALFGDHDLW 534
BLAST of glycine receptor subunit alpha-3-like vs. nr
Match: gi|1325319053|ref|XP_023341297.1| (glycine receptor subunit alpha-4-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 669.848 bits (1727), Expect = 0.000e+0 Identity = 355/543 (65.38%), Postives = 404/543 (74.40%), Query Frame = 0 Query: 34 DNPLELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGDIADIEKKKSMGISNLILGTRGIQLKKTDREFAYDNEGNVQMSTVLNEHPRQGERKYTDDFIGESDPTLDDGSY----NASHHQTPLDSHLLAPQECVHSRSRMHSGDSIYDTSKDHHHRKQRMMGMDQEGGMNGDYNPSNPLLPAELGRYNPNSGKVPPPPPPPINNHLATVSNNVLSQQGIKNLVHDVQMKRQKEIRDMMKKKREKAVLVDRISRWLFPTSFILLNIVYWALFGDHDLW 572 D+PLEL DI+P++ K+YDKMRPPK +GNAT+V FHVTVMSLDTIDESSMTYTCD+FFAQSWKD RLRLPDNMTSEYRLLP+EWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWL++DK+ILYMVKLTLVLSC M+FKNYPHD Q CNL+IESISHTTDDL+F WDP +PLDVD GIELPQLEL DCTT YSTG FTCLEVVFMFKRRLGYYLFHTY+PTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVN+VMGDIADIEKKKS+GIS++++ +R L T N+ + ++ ++ E R+ + D+ +G +GS N SH C+H ++ SIY++ K ++ E G + + +P LP + I N T+ IK D KRQKEIRD+MKK+REKAVLVDRISRWLFPTSFILLNIVYWALFGDHDLW Sbjct: 43 DDPLELNDILPRHNKIYDKMRPPKREGNATKVFFHVTVMSLDTIDESSMTYTCDIFFAQSWKDFRLRLPDNMTSEYRLLPVEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLYQDKSILYMVKLTLVLSCAMNFKNYPHDEQICNLKIESISHTTDDLVFEWDPIMPLDVDSGIELPQLELTHNFTGDCTTAYSTGNFTCLEVVFMFKRRLGYYLFHTYLPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNVVMGDIADIEKKKSVGISSILMNSRSPGLHLTPP----INQEKI-LADLMQEQDRKEQE--ADNGMGFYSEMKLEGSMESDTNGSH--------------CLHRSVQLGPHRSIYNSK-----LKDELL----EKG-HPQISKHSPFLPPPPPPPH------------YIKNQYPTI---------IKANPQDAHAKRQKEIRDLMKKRREKAVLVDRISRWLFPTSFILLNIVYWALFGDHDLW 533
BLAST of glycine receptor subunit alpha-3-like vs. nr
Match: gi|1059521067|gb|AOG14385.1| (histamine receptor type 2, partial [Cancer borealis]) HSP 1 Score: 511.531 bits (1316), Expect = 4.985e-176 Identity = 237/303 (78.22%), Postives = 268/303 (88.45%), Query Frame = 0 Query: 37 LELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGDIAD 339 LE+ DI+P++ K YDKMRPP+ +GN T V FHVTVMSLD+IDESSMTY D+FFAQSWKD+RLR P NMT EYRLLP+ WL +IWRPD+FFKNAKSVTFQTMTIPNHY+WL D TILYMVKLTL+LSC M+F+ YPHD+Q C ++IES+SHTTDDL+F+WDP +PL VD IELPQL+L+S DCT YSTG FTCLEVVF FKRRLGYYLFHTY+PTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAID+FMS CTVFVFLSLMEYA+VNI++GD+ D Sbjct: 40 LEITDILPEDTKSYDKMRPPQSQGNPTVVYFHVTVMSLDSIDESSMTYAADIFFAQSWKDHRLRFPQNMTGEYRLLPVSWLKDIWRPDAFFKNAKSVTFQTMTIPNHYLWLNLDYTILYMVKLTLLLSCAMNFQTYPHDSQQCAMKIESLSHTTDDLVFVWDPVVPLVVDDTIELPQLDLVSNSTGDCTQVYSTGNFTCLEVVFTFKRRLGYYLFHTYIPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDLFMSSCTVFVFLSLMEYAMVNIILGDMVD 342
BLAST of glycine receptor subunit alpha-3-like vs. nr
Match: gi|1059521065|gb|AOG14384.1| (histamine receptor type 1 [Cancer borealis]) HSP 1 Score: 509.22 bits (1310), Expect = 2.073e-173 Identity = 241/316 (76.27%), Postives = 270/316 (85.44%), Query Frame = 0 Query: 24 RGDANDSSDLDNPLELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGDIAD 339 RG ND PLE DIMP N + YDKM PPK + T V HVTVMSLD+IDESSMTY D+FFAQSWKD RLRLPDNMT EYRLLP+ WL +IWRPDSFFKNAK+VTFQ MTIPNHY+WL++D TILYMVKLTLVLSC M+F+ YPHDTQ C+++IES+SHTTDDL+FIW+P++PL VDK IELPQL+L+ DCT YSTG FTCLE+VF FKRRLGYYLFHTY+PTCLIVIMSWISFWI+PEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMS CTVFVF SLMEYALVN+V+GD+ + Sbjct: 34 RGSVND-----GPLEFEDIMPDNPRDYDKMAPPKGGDDPTTVLVHVTVMSLDSIDESSMTYAADIFFAQSWKDWRLRLPDNMTHEYRLLPVAWLKDIWRPDSFFKNAKAVTFQEMTIPNHYLWLYQDNTILYMVKLTLVLSCAMNFQVYPHDTQECHMKIESLSHTTDDLVFIWEPEVPLVVDKNIELPQLDLVKKFTGDCTQVYSTGNFTCLEIVFTFKRRLGYYLFHTYIPTCLIVIMSWISFWIRPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSSCTVFVFFSLMEYALVNVVLGDVPE 344
BLAST of glycine receptor subunit alpha-3-like vs. nr
Match: gi|801374741|ref|XP_012063107.1| (PREDICTED: glycine receptor subunit alpha-3 [Atta cephalotes] >gi|1068391787|ref|XP_018045031.1| PREDICTED: glycine receptor subunit alpha-3 [Atta colombica]) HSP 1 Score: 503.827 bits (1296), Expect = 3.388e-172 Identity = 231/301 (76.74%), Postives = 264/301 (87.71%), Query Frame = 0 Query: 37 LELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGDI 337 LE D++P++ KLYDKMRPPK G+AT VNFHVTVM LD+IDE+SMTY D+FFAQ+WKDNRLRLP+NMTSEYRLL ++WL +WRPDSFFKNAKSVTFQTMT+PNHY+WL+KDKTILYMVKLTL LSC M+F YPHDTQ C L++ES+SHTTD++IF WDP +PL VD+ IELPQL+L+ DCT YSTG FTCLEVVF+ KRRLGYYLFHTYVPTCLIVIMSWISFWIKPEA PARVTLGVTSLLTLSTQHA SQ SLPPVSY+KA+D FMS CTVFVF++LMEY LVNIV+GD+ Sbjct: 33 LEFFDLLPEDPKLYDKMRPPKKDGHATVVNFHVTVMGLDSIDENSMTYAADIFFAQTWKDNRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTVPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWDPDVPLVVDENIELPQLQLVKNYTADCTQVYSTGNFTCLEVVFVLKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTVFVFMALMEYCLVNIVLGDL 333
BLAST of glycine receptor subunit alpha-3-like vs. nr
Match: gi|1070180537|ref|XP_018348950.1| (PREDICTED: glycine receptor subunit alpha-3 isoform X1 [Trachymyrmex septentrionalis]) HSP 1 Score: 502.671 bits (1293), Expect = 8.783e-172 Identity = 236/330 (71.52%), Postives = 273/330 (82.73%), Query Frame = 0 Query: 7 GNVFAFWSILIYITIVGRGDANDSSDLDNPLELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGD 336 G FA S ++++ R S LE D++P++ KLYDKMRPPK G+AT VNFHVTVM LD+IDE+SMTY D+FFAQ+WKDNRLRLP+NMTSEYRLL ++WL +WRPDSFFKNAKSVTFQTMT+PNHY+WL+KDKTILYMVKLTL LSC M+F YPHDTQ C L++ES+SHTTD++IF WDP +PL VD+ IELPQL+L+ DC+ YSTG FTCLEVVF+ KRRLGYYLFHTYVPTCLIVIMSWISFWIKPEA PARVTLGVTSLLTLSTQHA SQ SLPPVSY+KA+D FMS CTVFVF++LMEY LVNIV+GD Sbjct: 10 GMSFATLSSVLFLLFFSRAVNAQRS-----LEFFDLLPEDPKLYDKMRPPKKDGHATVVNFHVTVMGLDSIDENSMTYAADIFFAQTWKDNRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTVPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWDPDVPLVVDENIELPQLQLVKNYTADCSQVYSTGNFTCLEVVFVLKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTVFVFMALMEYCLVNIVLGD 334
BLAST of glycine receptor subunit alpha-3-like vs. nr
Match: gi|1059521073|gb|AOG14388.1| (histamine receptor type 1 [Homarus americanus]) HSP 1 Score: 507.679 bits (1306), Expect = 9.681e-172 Identity = 235/306 (76.80%), Postives = 267/306 (87.25%), Query Frame = 0 Query: 34 DNPLELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGDIAD 339 D PLE DIMP N + YDKM PPK + T V FHVTVMSLD+IDESSMTY D+FFAQSWKD RLRLPDNMT EYRLLP+ WL +IWRPDSFFKNAK+VTFQ MTIPNHYIWL++D TILYMVKLTLVLSC M+F+ YPHDTQ C+++IES+SHTTDDL+FIWDP++P++V++ IELPQL+L+ DCT YSTG FTCLEV+F KR LG+YLFHTY+PTCLIVIMSWISFWI+PEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMS CTVFVF SLMEYALVN+V+GD+ + Sbjct: 42 DGPLEFSDIMPDNPRDYDKMAPPKGGNDPTTVYFHVTVMSLDSIDESSMTYAADIFFAQSWKDWRLRLPDNMTHEYRLLPVAWLKDIWRPDSFFKNAKAVTFQEMTIPNHYIWLYQDNTILYMVKLTLVLSCAMNFQVYPHDTQECHMKIESLSHTTDDLVFIWDPEVPVEVERSIELPQLDLVKKYTGDCTQVYSTGNFTCLEVIFKLKRHLGHYLFHTYIPTCLIVIMSWISFWIRPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSSCTVFVFCSLMEYALVNVVLGDVPE 347
BLAST of glycine receptor subunit alpha-3-like vs. nr
Match: gi|340709978|ref|XP_003393576.1| (glycine receptor subunit alpha-3 isoform X1 [Bombus terrestris]) HSP 1 Score: 502.286 bits (1292), Expect = 1.400e-171 Identity = 237/333 (71.17%), Postives = 271/333 (81.38%), Query Frame = 0 Query: 30 SSDLDNPLELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGDIADIEKKKSMGISNLILGTRGIQLKK 362 ++D LE D++P++ KLYDKMRPPK G AT V FHVTVM LD+IDE+SMTY D+FFAQ+WKDNRLRLP+NMTSEYRLL ++WL +WRPDSFFKNAKSVTFQTMTIPNHY+WL+KDKTILYMVKLTL LSC M+F YPHDTQ C L++ES+SHTTD++IF WDP +PL VD+ IELPQL+L+ DCT YSTG FTCLEVVF+ KRRLGYYLFHTYVPTCLIVIMSW+SFWIKPEA PARVTLGVTSLLTLSTQHA SQ SLPPVSY+KA+D FMS CTVFVF++LMEY LVNIV+GD K S GT +L K Sbjct: 28 TADAQRSLEFFDLLPEDPKLYDKMRPPKKDGQATIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDNRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWDPDVPLVVDENIELPQLQLVKNYTADCTQVYSTGNFTCLEVVFVLKRRLGYYLFHTYVPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTVFVFMALMEYCLVNIVLGDSDTPPKPASPPQPPSSSGTDAAKLDK 360
BLAST of glycine receptor subunit alpha-3-like vs. nr
Match: gi|1070180541|ref|XP_018348951.1| (PREDICTED: glycine receptor subunit alpha-3 isoform X2 [Trachymyrmex septentrionalis]) HSP 1 Score: 501.901 bits (1291), Expect = 1.556e-171 Identity = 236/330 (71.52%), Postives = 273/330 (82.73%), Query Frame = 0 Query: 7 GNVFAFWSILIYITIVGRGDANDSSDLDNPLELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGD 336 G FA S ++++ R S LE D++P++ KLYDKMRPPK G+AT VNFHVTVM LD+IDE+SMTY D+FFAQ+WKDNRLRLP+NMTSEYRLL ++WL +WRPDSFFKNAKSVTFQTMT+PNHY+WL+KDKTILYMVKLTL LSC M+F YPHDTQ C L++ES+SHTTD++IF WDP +PL VD+ IELPQL+L+ DC+ YSTG FTCLEVVF+ KRRLGYYLFHTYVPTCLIVIMSWISFWIKPEA PARVTLGVTSLLTLSTQHA SQ SLPPVSY+KA+D FMS CTVFVF++LMEY LVNIV+GD Sbjct: 10 GMSFATLSSVLFLLFFSRAVNAQRS-----LEFFDLLPEDPKLYDKMRPPKKDGHATVVNFHVTVMGLDSIDENSMTYAADIFFAQTWKDNRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTVPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWDPDVPLVVDENIELPQLQLVKNYTADCSQVYSTGNFTCLEVVFVLKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTVFVFMALMEYCLVNIVLGD 334
BLAST of glycine receptor subunit alpha-3-like vs. nr
Match: gi|815896113|ref|XP_012245997.1| (glycine receptor subunit alpha-3 isoform X1 [Bombus impatiens]) HSP 1 Score: 501.901 bits (1291), Expect = 1.818e-171 Identity = 237/333 (71.17%), Postives = 271/333 (81.38%), Query Frame = 0 Query: 30 SSDLDNPLELGDIMPQNRKLYDKMRPPKYKGNATEVNFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEWLTEIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQSCNLEIESISHTTDDLIFIWDPQIPLDVDKGIELPQLELISTKNDDCTTEYSTGKFTCLEVVFMFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGDIADIEKKKSMGISNLILGTRGIQLKK 362 ++D LE D++P++ KLYDKMRPPK G AT V FHVTVM LD+IDE+SMTY D+FFAQ+WKDNRLRLP+NMTSEYRLL ++WL +WRPDSFFKNAKSVTFQTMTIPNHY+WL+KDKTILYMVKLTL LSC M+F YPHDTQ C L++ES+SHTTD++IF WDP +PL VD+ IELPQL+L+ DCT YSTG FTCLEVVF+ KRRLGYYLFHTYVPTCLIVIMSW+SFWIKPEA PARVTLGVTSLLTLSTQHA SQ SLPPVSY+KA+D FMS CTVFVF++LMEY LVNIV+GD K S GT +L K Sbjct: 28 TADAQRSLEFFDLLPEDPKLYDKMRPPKKDGQATIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDNRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWDPDVPLVVDENIELPQLQLVKNYTADCTQVYSTGNFTCLEVVFVLKRRLGYYLFHTYVPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTVFVFMALMEYCLVNIVLGDSDTPPKPASPPQPPSSSGTDAAKLDK 360 The following BLAST results are available for this feature:
BLAST of glycine receptor subunit alpha-3-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of glycine receptor subunit alpha-3-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of glycine receptor subunit alpha-3-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1121_size61474:37906..42882- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1121_size61474-snap-gene-0.22 ID=maker-scaffold1121_size61474-snap-gene-0.22|Name=glycine receptor subunit alpha-3-like|organism=Tigriopus kingsejongensis|type=gene|length=4977bp|location=Sequence derived from alignment at scaffold1121_size61474:37906..42882- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'glycine receptor subunit alpha-3-like' has the following synonyms
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