39s ribosomal protein mitochondrial precursor, maker-scaffold112_size353035-snap-gene-0.8 (gene) Tigriopus kingsejongensis

Overview
Name39s ribosomal protein mitochondrial precursor
Unique Namemaker-scaffold112_size353035-snap-gene-0.8
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of 39s ribosomal protein mitochondrial precursor vs. L. salmonis genes
Match: EMLSAG00000000599 (supercontig:LSalAtl2s:LSalAtl2s109:433216:433856:-1 gene:EMLSAG00000000599 transcript:EMLSAT00000000599 description:"maker-LSalAtl2s109-augustus-gene-4.31")

HSP 1 Score: 172.94 bits (437), Expect = 1.463e-54
Identity = 95/178 (53.37%), Postives = 117/178 (65.73%), Query Frame = 0
Query:   41 MNQAELQHLVSALRFKVLPLKLHKNILGPRGSLDKLRRHVTALIVNERIELPASHGDHTRLYTERLISDAVTFGDKHVHTMEMATWWLDQDRSAVHKLFKVLVPRFQDSRY--SYTQMWNAPNDWAENPTYPHRSDGII--KVLELRGHPFPKFEYSNSRPNRNHIHNVLLSEAKKDF 214
            MNQAE+  LV  L  K++  K  KN LG RG+LDK+R  VT LIV+ERI L       TRLY ERLIS+A+  GD H  TM +A+WWL    SAVHKLF+VLVPRF DS    S+T+++ AP     NP   +    I    V+EL+ +PFP   YSNSRPN+ HIHNVLLSEAKK++
Sbjct:    1 MNQAEVGRLVRTLGVKLIAPKRIKNPLGYRGTLDKVRESVTDLIVDERIHLRTPRAQLTRLYAERLISEAIMNGDCHKETMRIASWWLXSHPSAVHKLFQVLVPRFGDSEKVESFTRIFKAPMREEYNPNKKYSGAHIFGHSVVELKKNPFPPLAYSNSRPNKKHIHNVLLSEAKKEY 178          
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|75061918|sp|Q5RCA3.1|RM17_PONAB (RecName: Full=39S ribosomal protein L17, mitochondrial; Short=L17mt; Short=MRP-L17; Flags: Precursor)

HSP 1 Score: 74.3294 bits (181), Expect = 3.157e-15
Identity = 54/172 (31.40%), Postives = 84/172 (48.84%), Query Frame = 0
Query:   67 LGPRGSLDKLRRHVTALIVNERIELPASHGDHTRLYTERLISDAVTFGDKHVHTMEMATWWLDQDRSAVHKLFKVLVPRFQDSRYSYTQMWNAPNDWAENPTYPHRSDGIIKVLELRGHPFPKFEYSNSRPNRNHIHNVLLSEAKKDFNVVGLAQALAEAESKSHEQSEATE 238
            LGP   +  LR  +T L+ +ERIE P +  D  R Y E+LI D    GD +   M MA +WL  ++  + KLF+VL PR++D    YT+M   PN   +           + V+E +G+  P        P R+  H  LL++      + GL Q L++++  S+  S   +
Sbjct:   20 LGPESRIHLLRNLLTGLVRHERIEAPWARVDEMRGYAEKLI-DYGKLGDTNERAMRMADFWL-TEKDLIPKLFQVLAPRYKDQNGGYTRMRQIPNRSLDRAK--------MAVIEYKGNCLPPLPL----PRRDS-HLTLLNQL-----LQGLRQDLSQSQEASNHSSHTAQ 171          
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|74752931|sp|Q9NRX2.1|RM17_HUMAN (RecName: Full=39S ribosomal protein L17, mitochondrial; Short=L17mt; Short=MRP-L17; AltName: Full=LYST-interacting protein 2; AltName: Full=Mitochondrial large ribosomal subunit protein bL17m; Flags: Precursor)

HSP 1 Score: 73.1738 bits (178), Expect = 6.900e-15
Identity = 54/172 (31.40%), Postives = 83/172 (48.26%), Query Frame = 0
Query:   67 LGPRGSLDKLRRHVTALIVNERIELPASHGDHTRLYTERLISDAVTFGDKHVHTMEMATWWLDQDRSAVHKLFKVLVPRFQDSRYSYTQMWNAPNDWAENPTYPHRSDGIIKVLELRGHPFPKFEYSNSRPNRNHIHNVLLSEAKKDFNVVGLAQALAEAESKSHEQSEATE 238
            LGP   +  LR  +T L+ +ERIE P +  D  R Y E+LI D    GD +   M MA +WL  ++  + KLF+VL PR++D    YT+M   PN   +           + V+E +G+  P        P R+  H  LL++      + GL Q L +++  S+  S   +
Sbjct:   20 LGPESRIHLLRNLLTGLVRHERIEAPWARVDEMRGYAEKLI-DYGKLGDTNERAMRMADFWL-TEKDLIPKLFQVLAPRYKDQTGGYTRMLQIPNRSLDRAK--------MAVIEYKGNCLPPLPL----PRRDS-HLTLLNQL-----LQGLRQDLRQSQEASNHSSHTAQ 171          
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|81905675|sp|Q9D8P4.1|RM17_MOUSE (RecName: Full=39S ribosomal protein L17, mitochondrial; Short=L17mt; Short=MRP-L17; Flags: Precursor)

HSP 1 Score: 71.2478 bits (173), Expect = 4.072e-14
Identity = 40/95 (42.11%), Postives = 53/95 (55.79%), Query Frame = 0
Query:   67 LGPRGSLDKLRRHVTALIVNERIELPASHGDHTRLYTERLISDAVTFGDKHVHTMEMATWWLDQDRSAVHKLFKVLVPRFQDSRYSYTQMWNAPN 161
            LGP   +  LR  +T L+ +ERIE   +  D  R Y E+LI D    GD +   M MA +WL  ++  + KLFKVL PRFQ    +YT+M   PN
Sbjct:   20 LGPESRIHLLRNLLTGLVRHERIEATWARADEMRGYAEKLI-DYGKLGDTNERAMRMADFWL-TEKDLIPKLFKVLAPRFQGQNGNYTRMLQIPN 112          
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|81892538|sp|Q6PDW6.1|RM17_RAT (RecName: Full=39S ribosomal protein L17, mitochondrial; Short=L17mt; Short=MRP-L17; Flags: Precursor)

HSP 1 Score: 70.0922 bits (170), Expect = 9.816e-14
Identity = 44/122 (36.07%), Postives = 63/122 (51.64%), Query Frame = 0
Query:   67 LGPRGSLDKLRRHVTALIVNERIELPASHGDHTRLYTERLISDAVTFGDKHVHTMEMATWWLDQDRSAVHKLFKVLVPRFQDSRYSYTQMWNAPNDWAENPTYPHRSDGIIKVLELRGHPFP 188
            LGP   +  LR  +T L+ +ERIE   +  D  R Y E+LI D    GD +   M MA +WL  ++  + KLFKVL PRFQ    +YT+M   PN   ++          + V+E +G+  P
Sbjct:   20 LGPESRIHLLRNLLTGLVRHERIEATWARVDEMRGYAEKLI-DYGKLGDTNERAMRMADFWL-TEKDLIPKLFKVLAPRFQGQNGNYTRMLQIPNRKEQD-------RAKMAVIEYKGNCLP 132          
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Match: gi|114158573|sp|Q3T0L3.1|RM17_BOVIN (RecName: Full=39S ribosomal protein L17, mitochondrial; Short=L17mt; Short=MRP-L17; Flags: Precursor)

HSP 1 Score: 65.855 bits (159), Expect = 3.698e-12
Identity = 37/95 (38.95%), Postives = 52/95 (54.74%), Query Frame = 0
Query:   67 LGPRGSLDKLRRHVTALIVNERIELPASHGDHTRLYTERLISDAVTFGDKHVHTMEMATWWLDQDRSAVHKLFKVLVPRFQDSRYSYTQMWNAPN 161
            LGP   +  L+  +T L+ +ERIE   +  D  R Y E+LI D    GD +   M MA +WL  ++  + KLF+VL PR+Q     YT+M   PN
Sbjct:   20 LGPESRIHLLQNLLTGLVRHERIEASWARVDELRGYAEKLI-DYGKLGDTNERAMRMADFWLT-EKDLIPKLFQVLAPRYQGQNGGYTRMLQIPN 112          
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|225714446|gb|ACO13069.1| (39S ribosomal protein L17, mitochondrial precursor [Lepeophtheirus salmonis])

HSP 1 Score: 174.096 bits (440), Expect = 4.726e-51
Identity = 95/178 (53.37%), Postives = 118/178 (66.29%), Query Frame = 0
Query:   41 MNQAELQHLVSALRFKVLPLKLHKNILGPRGSLDKLRRHVTALIVNERIELPASHGDHTRLYTERLISDAVTFGDKHVHTMEMATWWLDQDRSAVHKLFKVLVPRFQDSRY--SYTQMWNAPNDWAENPTYPHRSDGII--KVLELRGHPFPKFEYSNSRPNRNHIHNVLLSEAKKDF 214
            MNQAE+  LV  L  K++  K  KN LG RG+LDK+R  VT LIV+ERI L       TRLY ERLIS+A+  GD H  TM +A+WWL+   SAVHKLF+VLVPRF DS    S+T+++ AP     NP   +    I    V+EL+ +PFP   YSNSRPN+ HIHNVLLSEAKK++
Sbjct:    1 MNQAEVGRLVRTLGVKLIAPKRIKNPLGYRGTLDKVRESVTDLIVDERIHLRTPRAQLTRLYAERLISEAIMNGDCHKETMRIASWWLESHPSAVHKLFQVLVPRFGDSEKVESFTRIFKAPMREEYNPNKKYSGAHIFGHSVVELKKNPFPPLAYSNSRPNKKHIHNVLLSEAKKEY 178          
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|290562043|gb|ADD38418.1| (39S ribosomal protein L17, mitochondrial [Lepeophtheirus salmonis])

HSP 1 Score: 172.17 bits (435), Expect = 2.059e-50
Identity = 95/176 (53.98%), Postives = 116/176 (65.91%), Query Frame = 0
Query:   41 MNQAELQHLVSALRFKVLPLKLHKNILGPRGSLDKLRRHVTALIVNERIELPASHGDHTRLYTERLISDAVTFGDKHVHTMEMATWWLDQDRSAVHKLFKVLVPRFQDSRY--SYTQMWNAPNDWAENPTYPHRSDGII--KVLELRGHPFPKFEYSNSRPNRNHIHNVLLSEAKK 212
            MNQAE+  LV  L  K++  K  KN LG RG+LDK+R  VT LIV+ERI L       TRLY ERLIS+A+  GD H  TM +A+WWL+   SAVHKLF+VLVPRF DS    S+T+++ AP     NP   +    I    V+EL+ +PFP   YSNSRPN+ HIHNVLLSEAKK
Sbjct:    1 MNQAEVGRLVRTLGVKLIAPKRIKNPLGYRGTLDKVRESVTDLIVDERIHLRTPRAQLTRLYAERLISEAIMNGDCHKETMRIASWWLESHPSAVHKLFQVLVPRFGDSEKVESFTRIFKAPMREEYNPNKKYSGAHIFGHSVVELKKNPFPPLAYSNSRPNKKHIHNVLLSEAKK 176          
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1069812748|ref|XP_018329976.1| (PREDICTED: 39S ribosomal protein L17, mitochondrial [Agrilus planipennis])

HSP 1 Score: 173.326 bits (438), Expect = 2.093e-50
Identity = 95/200 (47.50%), Postives = 128/200 (64.00%), Query Frame = 0
Query:   41 MNQAELQHLVSALRFKVLP-LKLHKNILGPRGSLDKLRRHVTALIVNERIELPASHGDHTRLYTERLISDAVTFGDKHVHTMEMATWWLDQDRSAVHKLFKVLVPRFQDSRYSYTQMWNAPNDWAENPTYPHRSDGIIK-VLELRGHPFPKFEYSNSRPNRNHIHNVLLSEAKKDFNVVGLAQALAEAESKSHEQSEATE 238
            MNQA++  LVS LR KV P L+   N  GP G LDKLR+ VT LI +ERIEL     D  R+Y ERLISDA+ +GD H  TMEMA +W+  ++  +HKLFKVLVPRFQD   SYT+++  P+ +   P    R D   K VLELRG+P+P     + + N+N IHN+LL EAKK++ +   A+ +A  E K   Q+++ +
Sbjct:    1 MNQADVSKLVSQLRIKVNPRLRRFSNPNGPAGRLDKLRKTVTGLIKHERIELNYPRADEARMYAERLISDAIRYGDCHRTTMEMADFWI-IEKQLIHKLFKVLVPRFQDCNTSYTRLYKVPSPY---PIIYKREDCYRKAVLELRGNPYPSL-LPDKQYNKNIIHNILLEEAKKEYRMQKYAEVVANTEEKGKCQTDSPD 195          
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|907718348|ref|XP_013112468.1| (PREDICTED: 39S ribosomal protein L17, mitochondrial [Stomoxys calcitrans])

HSP 1 Score: 172.94 bits (437), Expect = 2.624e-50
Identity = 96/200 (48.00%), Postives = 131/200 (65.50%), Query Frame = 0
Query:   41 MNQAELQHLVSALRFKVLPLKLH-KNILGPRGSLDKLRRHVTALIVNERIELPASHGDHTRLYTERLISDAVTFGDKHVHTMEMATWWLDQDRSAVHKLFKVLVPRFQDSRYSYTQMWNAPNDWAENPTYPHRSDGIIKVLELRGHPFPKFEYSNSRPNRNHIHNVLLSEAKKDFNVVGLAQALAEAESKSHEQSEATEG 239
            MNQAE+  L+S LRF + P K H KN  GP G L KLR+ VTAL+ +ERIEL  +  D  R Y E LISDA+ +GD+H  TME+A +WL  ++  VHKLFKV+VPRF++S  SYT+M+ AP D+     Y  ++     VLELRGHP+P  +   S+ NRN IHN+LL EA+K++    LA+   +  ++S + S+  EG
Sbjct:    1 MNQAEVTKLMSQLRFALRPAKRHLKNPDGPEGRLLKLRKTVTALVKHERIELYYNRADEARGYAELLISDAIRYGDRHKATMELADFWL-LEKQLVHKLFKVIVPRFENSNVSYTRMYKAPRDYP--GMYYDKA-----VLELRGHPYPSLQQDFSQ-NRNFIHNILLDEARKEYRREKLAEMANKLAAESSDASKVAEG 191          
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1048060637|ref|XP_017483802.1| (PREDICTED: 39S ribosomal protein L17, mitochondrial [Rhagoletis zephyria])

HSP 1 Score: 170.244 bits (430), Expect = 2.586e-49
Identity = 98/207 (47.34%), Postives = 134/207 (64.73%), Query Frame = 0
Query:   41 MNQAELQHLVSALRFKVLPLKLHKNILGPRGSLDKLRRHVTALIVNERIELPASHGDHTRLYTERLISDAVTFGDKHVHTMEMATWWLDQDRSAVHKLFKVLVPRFQDSRYSYTQMWNAPNDWAENPTYPHRSDGIIKVLELRGHPFPKF--EYSNSRPNRNHIHNVLLSEAKKDFNVVGLAQALAEAESKSHEQSEATEGNETEKR 245
            MNQA++  L+S LR  V P +  KN  GP G L KLR+ VTAL+ +ERIEL  +  D  R Y E LIS+A+ +GD+H  TME+A +WL  ++  VHKLFKVLVPRF++S  SYT+M+ AP D+   P   +R      VLELRG+P+P    +YSN   NRN IHN+LL EA+KD+    LA+   +  ++S + ++ TE NE E +
Sbjct:    1 MNQADVSKLMSQLRIAVKPRRNLKNPDGPEGRLLKLRKTVTALVKHERIELYYNRADEARGYAELLISNAIRYGDRHTSTMELADYWL-LEKQLVHKLFKVLVPRFENSNLSYTRMYKAPRDY---PGMYYRKS----VLELRGNPYPSLLPDYSN---NRNLIHNILLDEARKDYRRERLAEIADKIAAESSDNAKKTE-NEPEAK 195          
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1279726412|ref|XP_022907833.1| (39S ribosomal protein L17, mitochondrial [Onthophagus taurus])

HSP 1 Score: 169.088 bits (427), Expect = 3.135e-49
Identity = 96/190 (50.53%), Postives = 123/190 (64.74%), Query Frame = 0
Query:   41 MNQAELQHLVSALRFKVLP-LKLHKNILGPRGSLDKLRRHVTALIVNERIELPASHGDHTRLYTERLISDAVTFGDKHVHTMEMATWWLDQDRSAVHKLFKVLVPRFQDSRYSYTQMWNAPNDWAENPTYPHRSDGIIKVLELRGHPFPKFEYSNSRPNRNHIHNVLLSEAKKDFNVVGLAQALAEAESK 229
            MNQAE+  LVS LR KV P L+  ++  GP   LDKLR+ VTALI +ERIEL     D  R+Y ERLISDA+ +GD H  TMEMA +WL  ++  VHKLFKVL PRFQDSR  YT+M+ AP  +   P   H    +  VLELRG+P+P     N+  N+N IHN+LL+EAKK++     A+  A+ + K
Sbjct:    1 MNQAEVSKLVSQLRIKVNPRLRKFRSPGGPEARLDKLRKTVTALIKHERIELNYPRADEARMYAERLISDAIRYGDCHKTTMEMADYWL-VEKQLVHKLFKVLAPRFQDSRVCYTRMYKAPRPY---PGEKH----LKAVLELRGNPYPALIEDNA-SNKNWIHNILLNEAKKEYRKEKYAEIAAKIDEK 181          
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1325312073|ref|XP_023337669.1| (39S ribosomal protein L17, mitochondrial-like [Eurytemora affinis])

HSP 1 Score: 169.088 bits (427), Expect = 3.843e-49
Identity = 94/178 (52.81%), Postives = 117/178 (65.73%), Query Frame = 0
Query:   41 MNQAELQHLVSALRFKVLP---LKLHKNIL--GPRGSLDKLRRHVTALIVNERIELPASHGDHTRLYTERLISDAVTFGDKHVHTMEMATWWLDQDRSAVHKLFKVLVPRFQDSRYSYTQMWNAPNDWAENPTYPHRSDGIIKVLELRGHPFPKFEYSNSRPNRNHIHNVLLSEAKKD 213
            MNQAE+  L+S +RFKV P   L + K  L  G RG L   R+ VTALI +ER+E     G   R YTERL+ +AV  GDKH+ TM++A+WWL  D+S VHKLFKVLVPRFQD   SYT+M  AP  +          D +  VLELRG+PFP   YSN+ PNR HIHNVLL+EA+++
Sbjct:    1 MNQAEVGKLISQMRFKVQPKPWLLVSKESLNRGMRGQLLATRKSVTALIKDERVEFTYGRGVVAREYTERLLQEAVAHGDKHIPTMDLASWWLT-DKSLVHKLFKVLVPRFQDMSCSYTRMLKAPMVYKPEGGPIEGKDRV--VLELRGNPFPPLFYSNTEPNRAHIHNVLLNEARRE 175          
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|961376894|gb|ALS05191.1| (mitochondrial 39S ribosomal protein L17 [Tortanus dextrilobatus])

HSP 1 Score: 169.088 bits (427), Expect = 4.563e-49
Identity = 95/179 (53.07%), Postives = 118/179 (65.92%), Query Frame = 0
Query:   41 MNQAELQHLVSALRFKV------LPLKLHKNILGPRGSLDKLRRHVTALIVNERIELPASHGDHTRLYTERLISDAVTFGDKHVHTMEMATWWLDQDRSAVHKLFKVLVPRFQDSRYSYTQMWNAPNDWAENPTYPHRSDGIIKVLELRGHPFPKFEYSNSRPNRNHIHNVLLSEAKKD 213
            MNQAE+  L+S LRFKV      +P K   N  G RG L   R+ VTALI +ER+E     G   R YTERL+ +A++ GDKHV TM++ATWWL  D+S VHKLFKVLVPRFQD   SYT+M  AP  ++  P      D +I  LELRG+PFP   YSN+ PNR  IHNVLL+EA+++
Sbjct:    1 MNQAEVGKLISQLRFKVQPKPWNIPSKESFN-RGTRGQLLATRKSVTALIKDERVEFTYGRGVVVREYTERLLQEAISNGDKHVPTMDLATWWLT-DKSLVHKLFKVLVPRFQDMSCSYTRMLKAPMQYS--PGRLSTRDRVI--LELRGNPFPALNYSNTEPNRGLIHNVLLAEARRE 173          
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1121164440|ref|XP_019527811.1| (PREDICTED: 39S ribosomal protein L17, mitochondrial [Aedes albopictus] >gi|1000213576|gb|KXJ82985.1| hypothetical protein RP20_CCG010028 [Aedes albopictus])

HSP 1 Score: 166.392 bits (420), Expect = 4.979e-48
Identity = 96/202 (47.52%), Postives = 127/202 (62.87%), Query Frame = 0
Query:   41 MNQAELQHLVSALRFKVLPLKLH-KNILGPRGSLDKLRRHVTALIVNERIELPASHGDHTRLYTERLISDAVTFGDKHVHTMEMATWWLDQDRSAVHKLFKVLVPRFQDSRYSYTQMWNAPNDWAENPTYPHRSDGIIKVLELRGHPFPKFEYSNSRPNRNHIHNVLLSEAKKDFNVVGLAQALAEAESKSHEQSEATEGNE 241
            MNQAE+  L+S L+  V P   + KNI GP G LDKLR+ VTALI +ERIEL     D  R Y ERLISDA+ +GD+H  TMEMA +WL  ++  VHKLFKVL PRF++ + S T+M+ AP ++     Y  R+     VLELRG+P+P     N   NR+ +HNVLL EA+KDF     A+  A+   ++ E +  +EG E
Sbjct:    1 MNQAEVAKLMSQLKIAVRPRHRNLKNIDGPEGRLDKLRKTVTALIKHERIELNYQRADEARGYAERLISDAIRYGDRHQPTMEMADYWLT-EKQLVHKLFKVLAPRFEEYKVSATRMYKAPKEYP--GWYRKRA-----VLELRGNPYPAL-VPNLHQNRSLLHNVLLDEARKDFRKEKYAEIAAQIGEQAKETTGKSEGGE 193          
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|557760807|ref|XP_005180123.1| (PREDICTED: 39S ribosomal protein L17, mitochondrial [Musca domestica])

HSP 1 Score: 165.236 bits (417), Expect = 1.893e-47
Identity = 101/210 (48.10%), Postives = 130/210 (61.90%), Query Frame = 0
Query:   41 MNQAELQHLVSALRFKVLPLKLH-KNILGPRGSLDKLRRHVTALIVNERIELPASHGDHTRLYTERLISDAVTFGDKHVHTMEMATWWLDQDRSAVHKLFKVLVPRFQDSRYSYTQMWNAPNDWAENPTYPHRSDGII---KVLELRGHPFPKFEYSNSRPNRNHIHNVLLSEAKKDFNVVGLAQALAEAESKSHEQSEATEGNETEKRD 246
            MNQAE+  L+S LRF V P K + KN  GP G L KLR+ VTAL+ +ERIEL     D  R Y E LISDA+  GD+H  TME+A +WL  ++  VHKLFKVLVPRF++S  S+T+M+ AP D      YP    GI     VLELRG+P+P      S+ NRN+IHN+LL EA+KD+    LA+   +  S++ E  +A E     K D
Sbjct:    1 MNQAEVTKLMSQLRFAVRPNKRNLKNPDGPEGRLMKLRKTVTALVKHERIELFYQRADEARGYAELLISDAIRHGDRHKATMELADFWL-LEKQLVHKLFKVLVPRFENSNVSFTRMYKAPRD------YP----GIYYDKAVLELRGNPYPSLLPDFSQ-NRNYIHNILLDEARKDYRREKLAEMATKLASETTETPKAAEPKAETKSD 198          
The following BLAST results are available for this feature:
BLAST of 39s ribosomal protein mitochondrial precursor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000005991.463e-5453.37supercontig:LSalAtl2s:LSalAtl2s109:433216:433856:-... [more]
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BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
gi|75061918|sp|Q5RCA3.1|RM17_PONAB3.157e-1531.40RecName: Full=39S ribosomal protein L17, mitochond... [more]
gi|74752931|sp|Q9NRX2.1|RM17_HUMAN6.900e-1531.40RecName: Full=39S ribosomal protein L17, mitochond... [more]
gi|81905675|sp|Q9D8P4.1|RM17_MOUSE4.072e-1442.11RecName: Full=39S ribosomal protein L17, mitochond... [more]
gi|81892538|sp|Q6PDW6.1|RM17_RAT9.816e-1436.07RecName: Full=39S ribosomal protein L17, mitochond... [more]
gi|114158573|sp|Q3T0L3.1|RM17_BOVIN3.698e-1238.95RecName: Full=39S ribosomal protein L17, mitochond... [more]
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BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|225714446|gb|ACO13069.1|4.726e-5153.3739S ribosomal protein L17, mitochondrial precursor... [more]
gi|290562043|gb|ADD38418.1|2.059e-5053.9839S ribosomal protein L17, mitochondrial [Lepeopht... [more]
gi|1069812748|ref|XP_018329976.1|2.093e-5047.50PREDICTED: 39S ribosomal protein L17, mitochondria... [more]
gi|907718348|ref|XP_013112468.1|2.624e-5048.00PREDICTED: 39S ribosomal protein L17, mitochondria... [more]
gi|1048060637|ref|XP_017483802.1|2.586e-4947.34PREDICTED: 39S ribosomal protein L17, mitochondria... [more]
gi|1279726412|ref|XP_022907833.1|3.135e-4950.5339S ribosomal protein L17, mitochondrial [Onthopha... [more]
gi|1325312073|ref|XP_023337669.1|3.843e-4952.8139S ribosomal protein L17, mitochondrial-like [Eur... [more]
gi|961376894|gb|ALS05191.1|4.563e-4953.07mitochondrial 39S ribosomal protein L17 [Tortanus ... [more]
gi|1121164440|ref|XP_019527811.1|4.979e-4847.52PREDICTED: 39S ribosomal protein L17, mitochondria... [more]
gi|557760807|ref|XP_005180123.1|1.893e-4748.10PREDICTED: 39S ribosomal protein L17, mitochondria... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold112_size353035supercontigscaffold112_size353035:4030..5838 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold112_size353035-snap-gene-0.8-mRNA-1maker-scaffold112_size353035-snap-gene-0.8-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold112_size353035:4030..5838-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold112_size353035-snap-gene-0.8 ID=maker-scaffold112_size353035-snap-gene-0.8|Name=39s ribosomal protein mitochondrial precursor|organism=Tigriopus kingsejongensis|type=gene|length=1809bp|location=Sequence derived from alignment at scaffold112_size353035:4030..5838- (Tigriopus kingsejongensis)
ATGCTAGCGTTGACTTCCCTCGGCACAAACTGCACGTTCTCCATCAACGT TCAGCAACCGAACACAACAACAAGCCCATCCATCCGACTCTCAACGTATC AGTATCAGGAGGCTTCCAGGTAAGGCCATGAATATGAATGGCGAATATAA TTGGTTCAATTACACCTGTCCAGACCACGATTTCTCGAGTTAACTCGCGA TTTTGAATACTTCGCCGAGAATCAAAGTGAGCTTGAGACCACCCTTCTGC TCAATTCCAATATCGACCTCCCTTCTCACCCTATAAGGGTTCTTTAAAAA CAATGATCACGAGGAGATTGCAAGGGGTTCACTGGCCGAGCATAGCTGGA TAGCAAATCCGGGACCCTTCGGACTAGCCAGGCAAGGGATGTGCAACGTG TTTCGGCATGCATTGTCACAGGTTTGATAACTTACACTACATGCTTGTGA CTTCAACTTGACTTGTAAGTAACTGTAAAGTGTTAGCACCCACCGGCACA CTCAGGTATCTCTTCTACATATCCGGTTTGATGCTACATCATAGTGAAGT AAAACTCCAGAGCCCCCATACCTAGGGTCTTGTCTCACACCCCCAATTAA TCTTGAGTATCCTAGGGTTTTGTCTCATGTGTTTGAACACTTTTACGGTT CAAACATAATCTGCTAATGACTAACCAATTTTAGCCAATTTCATCATTCG TGTGATATCATATTGCAAACATTTACGACACTAATACAGGTGAGGAACAT TGTTTGGTCAGTTAACATGTGGTAGTCTTCCTTGGTTGCGACCAATGTTA TTTGTGTGTTCCTTAAGAAATTAATAACACTGAATGATTTTTTGATGATT GTTCTGGATTGGGGACAGGTATTCCTGGTAATAATAAATTTGACTGTCCA AATGTATGCTTATCAAGGGTTCAGCGCCTAGAGGACGTTAGATATCCTAT TTGTTTAGATCCCGACACTGCTCTCCATCCATTACAATTCCTCCCATCAT TCCGGAGGCATTAACACCAAAGCCCAAGTGCTTATCTGTACAAGCAACAC TAACTCAAGGACATTTCTTTCAGTATGAATCAAGCGGAGTTGCAGCATCT CGTGTCGGCCCTCCGATTCAAAGTCTTGCCACTAAAGTTACACAAGAATA TCCTGGGACCTCGTGGGAGCTTGGACAAACTTCGGCGCCATGTGACTGCA CTCATTGTCAACGAGAGGATCGAATTGCCCGCGAGTCATGGTGATCACAC CCGACTTTACACAGAGCGTCTCATCTCTGATGCCGTCACCTTCGGGGACA AACACGTTCACACCATGGAAATGGCCACTTGGTGGTTGGATCAGGACCGA TCAGCGGTCCACAAGCTGTTCAAGGTCCTAGTCCCGCGCTTCCAGGTACG CTTGCAATGTCGAAAGTCCGTTTTGGGTAACCTGTATGATGTGATCGTTT TAGGACTCACGGTATTCGTACACACAAATGTGGAATGCACCCAATGATTG GGCAGAGAACCCAACCTATCCTCATCGCTCCGATGGGATTATCAAGGTTT TGGAATTGCGCGGCCATCCCTTCCCCAAATTCGAGTACAGCAACTCGCGA CCAAACCGAAATCACATCCACAACGTCCTTCTCTCTGAGGCCAAGAAGGA CTTCAATGTCGTGGGTTTAGCTCAGGCTTTGGCTGAGGCTGAGAGTAAAT CCCATGAACAATCTGAGGCCACCGAAGGCAACGAGACCGAGAAGAGGGAT TGAAGCTTTTGTGAGTTTAGTAGATCTGTGGAAAATACATCATAAAACAA TAGGAAACA
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Synonyms
The feature '39s ribosomal protein mitochondrial precursor' has the following synonyms
Synonym
Tk07389
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