BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000001655 (supercontig:LSalAtl2s:LSalAtl2s128:1836948:1854487:1 gene:EMLSAG00000001655 transcript:EMLSAT00000001655 description:"augustus_masked-LSalAtl2s128-processed-gene-18.4")

HSP 1 Score: 256.914 bits (655), Expect = 2.607e-70
Identity = 224/869 (25.78%), Postives = 406/869 (46.72%), Query Frame = 0

Query:   75 KRIKEVLDETSEL-QDGDTALPD---TPQTLSITLDQFTWRGHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLH-DRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNALVATNAT--------------RASIGGIAMSKRDVLARLLRYLLDDKKGFAIAAVL--------LLVAAVADVSGPWLIRIFLDDYLAKDNFPPT---------VLWGLALAYIFATVLSAALHYSYGLRFSRIAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSI-ALISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDL----LTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFGWQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDA--KPHQYGSDDAPIE---NGDIEISDLTFSY-DGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHL-PLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLL 895
            K   E  DE ++  ++ +T +PD      +   T D FT        LR+I + ++  + +G+ GPVGSGK+T L+ IL       G++E      G+  + +    +A V Q P++ ++SI DNI  G+      +     +  C+D D      G  T+ GEKG  LSGGQK RI++ARA+  D +I ++DD  S++D    + +   +  +  + +T ++  H    +  A+ +I ++ G  E   +   LV T+ +               +++   ++ +      ++ Y +  K   AI   L         L+   ++ +  WL       +++ DNF            V  GLA+ +   T++ A L ++YG       I   + I   +   ++   +  FD  PAG++++R ++DT ++ +    ++  FL  I  +   +LV +Y + P + IV   LLP  +F  Y  Q +  P  RD + +    L+ I    +E++ G+ +I+     QRF      L + +          + ++L   + L+  I + S+A I      E +  G++   +SY   +T  L E++   +  ++ ++A ER ++ +D   +    G  + P      G +E  D+   Y D    VL  +N   K    + +VG TG+GKS+L + +        GEI + G  I  L     R   A++ QDP + S + R+N+      SD+ +W ++    L + +      GLDT IG G  +LS GQKQLL LAR ++   +++ +DEATA++D  T+  ++  L +  +  T++ IAHR+ T+ ++D I V+  G + E+G  + L+
Sbjct:  611 KYFTEYKDENTKASKEIETKIPDIQIMEASFGFTKDCFT--------LRNIDVSIKRQEFVGVLGPVGSGKTTFLNAIL-------GELE---KQSGKISVRDPLSGIAYVQQVPWIQNKSIRDNILFGEM-YIHGKYTKVIKACCLDHDFKHLHRGDHTIAGEKGAALSGGQKARIALARAIYQDKDIYLIDDVFSSLDVNVGYKVYTEVMLNLLKRKTRILCTHNPQYINDANIVIKIKDGEFESVKQSTHLVPTSTSPDFSYDTSMFDFKDNSNVIDDSVEEEMQETGVVAYRIYKKYWQAIGTYLAPTILISIFLMQVASNTTDLWL-----SHWVSTDNFQNNTEDTDHYIYVYSGLAVFHTILTLIRAFL-FAYG------GIHAAKIIHDLLLGVLLRAKIYFFDSTPAGRILNRFSSDTYAIDDSLPFILNIFLSQIFGVFGRVLVCVYAV-PWILIV---LLPLGLF-YYEIQCKYRPGSRDLKRISSVSLSPIYEHFNETVHGLKIIRASKASQRFLLENEELVECNQKARYAAFSAS-LWLEIRLQLIGSIVVFSIALI-SVINFESVDAGLVGLAVSYALGMTXRLAEVVVSFTETEKELVAVERAYDYIDRIYEESYSGVLNMPYNWPNQGVVEFKDIRLRYKDHLPYVLNKVNFKTKPKEKIGIVGRTGAGKSSLIAALFRLSSFSHGEIMVDGIRIRLLPLIDFRRQFAVIPQDPFIFSGTIRQNLDPYAQHSDQELWDSIKLSYLYNIIYSFGSSGLDTLIGDGGKSLSIGQKQLLCLARAIITSAKVVFIDEATASVDKETDRLIRNVLKTAFNDKTVITIAHRIETVLNSDRIFVMSNGQIIEEGKPEDLI 1441          

BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6")

HSP 1 Score: 239.965 bits (611), Expect = 1.106e-64
Identity = 234/848 (27.59%), Postives = 395/848 (46.58%), Query Frame = 0

Query:  118 LRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNL---HDRAQHQTTVVIAHRLSALEAADEIIVLQKGHI----------EERGKHNALVATNA----TRASIGGIAMSKRD------------------------VLARLLRYLLDD---KKGFAIAAVLLLVAAVADVSGPWLIRIFLDDYLAKDN----FPPTVLWGLALAYIFAT-----VLSAALHYSYGLRFSRIAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESL-KEFYVQVIASFLKSIALISAML-----VAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTD-INSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFGWQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAK---PHQYGSD-----DAPIENGDIEISDLTFSYDGKTT-VLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLA 896
             +DI++D+  G ++ I GPVGSGKS+L+S +L       G++ +  TS G   + E    +A   Q  ++ + S+ DNI  G+    +       +   ++ D+  F  G  T +GEKGI LSGGQKQRIS+ARA+   ++I  LDD L+ VD     H+ + +   +   + +T +++ H LS L   DEI  L+ G I          E+    + L++ +A    T  S     M K +                        V  R+  Y L       G    +  ++   +A  S  WL  ++ D   AK+N    +   +  GL ++ IF +     +LS +L     L  SRI       +   ++  II  P+S FD  P G++++R   D E L  +    +  S   + A I+ +      V ++++ PTL I V      V FV+      SS   +    + T  I S   E++ G++ ++    E+ F   F    D++      ++  +  +L   I+L+    + + +A+F     + I  G L   +S    +T  L  +++  S L+  I+A ER+ E  + +   P +   D       P++ G+I I +L+  Y      VL  IN  +  G  + +VG TGSGKSTLA  +     V SG+I + G  I  +  + +RS + ++ QDP + S + R N+       D  + ++L    L D+++    GLD  I      +S GQ+QL+ LAR L+ + ++LI+DEATA +DS T++ +Q+A+       T++ IAHRL T+ D   I+V+  G + E  + + LL+
Sbjct: 1164 FKDISMDVNRGNLIAIIGPVGSGKSSLISALL-------GEMLF--TSKGTNPV-EIHGSVAYTPQNAWMQNVSVKDNILFGR-KFNKNWYDEVLKACSLESDMEXFPSGDSTEIGEKGINLSGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVAKHLFEEVIGSNGLLRGKTRILVTHNLSFLHLVDEIYFLKDGEITEKGTYKELMEKNCDFSELISNHANNKITNQSDSEKVMEKINEEGTKQPIETNFKIYDEETLHTGQVGIRVYWYFLSKIGMLAGILAFSFFIISQILATGSSVWL-SVWSD---AKNNTDIYYHLGIYAGLGVSNIFISTAGTLILSLSL-----LDASRI-------LHGTLFQCIIKTPMSFFDTTPLGRILNRFGQDIEVLDTKMSFCIFGSMTGTFAYIATVTIISINVPIFII-PTLAIFV------VYFVILIVSLSSSRQLKRLSSVATSPIYSHFGETLSGINTVRAYSLEKAFYSEFERRLDEYQKRNFPVIMADR-WLGIRINLIGNFIIFA-SALFSVLSRDTITPGQLGLNVSSSLAITSILSWVIRMYSDLENNIVAVERIKEYSNKESEAPWELEEDLKLNSSWPLK-GEITIKNLSLKYRKDLDWVLRDINVHISPGDKIGIVGRTGSGKSTLALALFRLLEVNSGQITIDGVDIKKMGLHTLRSKLTIIPQDPTLFSGTLRLNLDPFGLFKDMELIESLKHAYLQDFLKED--GLDKVIAENGENISLGQRQLICLARALLRKNKVLIMDEATAAVDSETDKLIQKAIKDNFRDSTVLTIAHRLQTVLDYSKIIVIDSGCIIEYDSPKNLLS 1972          

HSP 2 Score: 109.768 bits (273), Expect = 2.848e-24
Identity = 91/308 (29.55%), Postives = 151/308 (49.03%), Query Frame = 0

Query:   32 MVANGTLTLGELTAFTLYQGLMIWPMLA-VAWLFNIIERGAAAWKRIKEVLDETSE----LQDGDTALPDTPQTLSITLDQFT--WRGHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIA---DNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNALVATNAT 329
            +++  T+T G+L    +   L I  +L+ V  +++ +E    A +RIKE  ++ SE    L++        P    IT+   +  +R      LRDI + +  G  +GI G  GSGKSTL   + R  +   G++   G  + +  +   R KL ++ Q P LFS ++    D   L K     E ++ A     + ED      G + ++ E G  +S GQ+Q I +ARALL   ++LI+D+A +AVD  T+  I K + D  +  T + IAHRL  +    +IIV+  G I E      L++ +++
Sbjct: 1676 VLSRDTITPGQL-GLNVSSSLAITSILSWVIRMYSDLENNIVAVERIKEYSNKESEAPWELEEDLKLNSSWPLKGEITIKNLSLKYRKDLDWVLRDINVHISPGDKIGIVGRTGSGKSTLALALFRLLEVNSGQITIDGVDIKKMGLHTLRSKLTIIPQDPTLFSGTLRLNLDPFGLFKDMELIESLKHAYLQDFLKED------GLDKVIAENGENISLGQRQLICLARALLRKNKVLIMDEATAAVDSETDKLIQKAIKDNFRDSTVLTIAHRLQTVLDYSKIIVIDSGCIIEYDSPKNLLSDSSS 1976          

HSP 3 Score: 88.5817 bits (218), Expect = 7.293e-18
Identity = 92/435 (21.15%), Postives = 193/435 (44.37%), Query Frame = 0

Query:  489 MLVAMYLLSPTL-------TIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFL-RPLIDLMSGIALLSLAAIFGWQGSE----VIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAKPHQYG----SDDAPIENGDIEISDLTFSYDGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRAL---SSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKKGRYWQM 904
            ++ A+YLL  TL        +V+ +L+P   F+    ++      +   + +  +N ++    QG+ +I+L   E  FS+   S+  +    E+K++K++  +    ++ + S    +SL     +  S+    ++    ++  IS    +  PL  L   +  +  A ++ +R+ + + ++  + G    S+    +   I  S          ++   I+  V  G  +A++G  GSGKS+L S ++G       E+    +  + +    +   +A   Q+  + + S ++N+  GR  +     + L    L   ++  P G  T IG   + LS GQKQ ++LAR +  +  I  LD+  A +DS   + +   +   + L    T +++ H LS +   D I  L  G + E+G +++L+ K   + ++
Sbjct:  955 IIAAIYLLINTLGYSALAGVLVMFLLIPINGFIAVRMKNAQMKQMKKKDERVKKMNEIL----QGIKIIKLYAWESSFSKLISSIRFE----EIKLLKLSSKYFGFMMLTISSTTFFISLFTFIVYVVSDPENHILDSEKIFVSISLFNILRFPLNMLTHVIGGIASASVSLKRINKFLASEELEEGILVRSNSHDHQAICIHPSSSFSWKGSSESLFKDISMDVNRGNLIAIIGPVGSGKSSLISALLG-------EMLFTSKGTNPV---EIHGSVAYTPQNAWMQNVSVKDNILFGRKFNKNWYDEVLKACSLESDMEXFPSGDSTEIGEKGINLSGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVAKHLFEEVIGSNGLLRGKTRILVTHNLSFLHLVDEIYFLKDGEITEKGTYKELMEKNCDFSEL 1371          

BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000007660 (supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 gene:EMLSAG00000007660 transcript:EMLSAT00000007660 description:"maker-LSalAtl2s445-augustus-gene-0.18")

HSP 1 Score: 207.994 bits (528), Expect = 1.388e-56
Identity = 158/563 (28.06%), Postives = 281/563 (49.91%), Query Frame = 0

Query:  363 VLLLVAAVADVSGPWLIRIFLDDYLAKDNF-----PPTVLWGLALAYIFATVLSAALHYSYGLRFSRIAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSIALISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFGWQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAKP--HQYGSDDAPIEN--GDIEISDLTFSYDGKT--TVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSG-EIQLGGRAISSLTQNAMR-SGIAMVQQDPHVLSASFRENVTLGR-NVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKKGRYWQMYQLQQTK 911
            + LL+  + +V   ++    L + +  DNF      PT    L++   +A      + Y Y L  + +  ++  ++RK ++ SII Q ++ FD    G++VSR++ D +  K  +  VI+  L+S A  S  +V+MY++SP +T  + +++P+V+    Y         + ++  +    +V  E I  +  ++    E    E +    D+       +    G+F       ++ I L ++         + +  G L +F+  +  +   + ++      L + + +G R+FE ++  P     G    P  +  GD+E  ++TFSY  +    VL   +  +     +ALVG +G GK+T+A+L+  FY +  G  +++ G  I  L  + +R S I  + Q+P + + S  EN+  GR N +D  +++A     + D+V+  P G  T +G   VT+S GQKQ +A+AR L++ P ILILDEAT+ +D+ +E  VQ AL  L    T +VIAHRLSTI +AD I V+ +G + E G H  L  K G Y ++ + Q+ +
Sbjct:  120 IPLLLGDIVNVVSSYISETVLSE-MRHDNFLREMKEPT----LSMIKFYAAQSICTIAYIYSL--ACLGERMAASLRKDLFNSIICQDIAFFDEHKTGEIVSRLSADVQEFKSSFKLVISQGLRSSAQASGCIVSMYMISPQMTSAMGVIVPTVILGGTYIGSYLRVLSKKAQAQVAKATAVGEECISNIRTVRGFAMEDAEMELYSREVDKTRDFNEALGLGIGVFQGASNFFLNSIVLGTITYGGYLMSDDNLNPGQLMSFLVSVQTIQRSITQVSLLFGHLVKGMASGSRIFEYIEKVPLIPISGGVKIPYHSFFGDVEFKNITFSYPTRPEQAVLKDFSLRIPPSKTVALVGTSGGGKTTIAALLERFYDINGGGSLEIDGINIRDLDPSWLRGSAIGYINQEPVLFATSVIENIRYGRPNATDNEVYEAAKAAHVDDFVRTFPDGYSTILGERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESERIVQEALDKLSKGRTSLVIAHRLSTIKNADVIAVIDKGVMAEIGTHAALKRKGGIYSRLIEQQEFR 675          

HSP 2 Score: 171.4 bits (433), Expect = 1.632e-44
Identity = 107/307 (34.85%), Postives = 176/307 (57.33%), Query Frame = 0

Query:   25 SIAGGGYMVANGTLTLGELTAFTLYQGLMIWPMLAVAWLFNIIERGAAAWKRIKEVLDETSELQ-DGDTALPDTPQTLSITLDQFTWRGHDVP---ALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQG--KVEYGGTSLGEFKIGEWRRKLAV--VTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNAL 323
            +I  GGY++++  L  G+L +F +    +   +  V+ LF  + +G A+  RI E +++   +   G   +P       +     T+     P    L+D ++ +   K + + G  G GK+T+ +L+ RF D I G   +E  G ++ +     W R  A+  + Q P LF+ S+ +NI  G+P+AT  E+  AA+ A +D+ +  F +GY T++GE+G+T+SGGQKQRI+IARALL +  ILILD+A SA+D  +E  + + L   ++ +T++VIAHRLS ++ AD I V+ KG + E G H AL
Sbjct:  354 TITYGGYLMSDDNLNPGQLMSFLVSVQTIQRSITQVSLLFGHLVKGMASGSRIFEYIEKVPLIPISGGVKIPYHSFFGDVEFKNITFSYPTRPEQAVLKDFSLRIPPSKTVALVGTSGGGKTTIAALLERFYD-INGGGSLEIDGINIRDLD-PSWLRGSAIGYINQEPVLFATSVIENIRYGRPNATDNEVYEAAKAAHVDDFVRTFPDGYSTILGERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESERIVQEALDKLSKGRTSLVIAHRLSTIKNADVIAVIDKGVMAEIGTHAAL 658          

BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000000090 (supercontig:LSalAtl2s:LSalAtl2s1014:9799:23913:-1 gene:EMLSAG00000000090 transcript:EMLSAT00000000090 description:"maker-LSalAtl2s1014-snap-gene-0.6")

HSP 1 Score: 203.756 bits (517), Expect = 3.930e-54
Identity = 229/914 (25.05%), Postives = 389/914 (42.56%), Query Frame = 0

Query:   53 MIWPMLAVAWLFNIIERGAAAWKRIKEVLD--ETSELQDGDTALPDTPQT-LSITLDQFTWRGHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNL---HDRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNAL----VATNATRASIGGI-----------AMSKRDVLAR------LLRYLLDD--KKGFAIAAVLLLVAAVADV-SGPWLIRIFLDDYLAKDNFPPT--------------------VLWGLALAYIFATVLSAALHYSYGLRFSRIAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASF-LKSIALISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSES-IQGMSLIQLMGQEQRFSERFGSLTDQHLTTEV-KIVKINGIFLRPLIDLMSGIALLSLAAIFGWQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAKPHQYGSDDAP--IENGD-----------IEISDLTFSYDG-KTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLT-QNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKK 898
            M  P   +    + + +G  + KRI   L+  E   ++  D +    P+   SI +    +    +  L++I    R G++  + G VGSGKS LL+ +   E   +GK    G+SL         + L  VTQ  +L S +I DNI  G+P     + +    L  + +D      G  T +   G TLSGGQ+QRI  ARA+  +A++ ++DD LSA D   +  I  N        Q +T ++I ++ S +   D IIV+Q G +EE+     +    +A  +T+   G             A+   D++ R      L +Y + +     F IA V  L++   DV S  WL R      L+  N   T                    + W  +LAY  + +L  +        F  +       I +KV+ +    PL+ F   P G +++R + D +    F    + +F  +++ ++  +++A+     T   +V  L    + V+  Y   S    R S   L  +     +S + G + I+  G E  + +   SL D+H +  + +I+    +FLR  + L++G  +  LA    +  SE     +    ++    V + +    +  + +++A+++ ER+ E  D  P    S   P  I NG            I+  D +  Y   K   +     +V+ G  + +VG TGSGKS+L   + G   V+ G+I + G  +SS T +N  +  I     D  +   S R N+      +DE IW  LD+  + ++   LP GLD ++      +S     L+             I+DEA + +   +EER+     S   + TI VIAHR+  +   D ILVL  G + E GN + L+  +
Sbjct:    1 MRIPFRLLPSCISALSQGIVSIKRIDSYLNREEVDSVKSNDFSKSPRPEDGYSIQVQDCNYSIDKLKLLKNINFSTRVGELTAVVGKVGSGKSCLLAALCG-ELNQRGK----GSSL-------INKDLVYVTQNIWLKSATIRDNITFGQP-YNSSQYQKVVSLCQLGQDFKDMYRGDLTYLASNGSTLSGGQRQRIGFARAIYQNAQVYLMDDPLSACDSNLKAQIFHNTIGPKGFLQKKTRLLITNQSSLIPLMDRIIVIQNGTVEEKDSAEEVKSFEIAKKSTKKQ-GSFHEPPKDNYLHPALDNYDIIERRKIPFSLYKYYVLNLGTVPFIIALVGYLISQCFDVCSKLWLSRW---TNLSSTNINDTNYRHIYNEDTRNMYIVVYGILGWCQSLAYFLSVLLINSRSLKASSHFHDV-------ILRKVFGA----PLNFFWSTPKGTIINRFSKDMDEADMFLPNTLKNFAYQAVKILGTLIIALIAFPITAFFIVCPLGLIFIEVVKSYLMASRFLKRTSATKLAMVLKHFGDSAVHGGTTIRCYGVESDYIDEHMSLIDEHQSVSLMEIISEAXLFLR--LQLIAGTFIGILATALVFFPSEGNSSSLSALSLTSSLTVLQDIFLFTRYAAFIEKAMVSIERIKECEDLIPQDPSSGLLPSIITNGSKRPKNHQSRYYIQFEDFSGKYSSLKNASIKNFTLNVRLGEKVGVVGRTGSGKSSLILALSGLLEVEKGKIFIDGVDMSSGTARNIRKKDIT----DAALFKGSIRYNLDPDDRFTDEYIWSVLDEAQMKEFFVQLPGGLDFSLKENGSNISLAGSNLI-------------IMDEAXSAMTLESEERILNTYFSRFSSSTIFVIAHRIQPLLACDKILVLENGTIAEFGNPESLIKSQ 867          

BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000003611 (supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 gene:EMLSAG00000003611 transcript:EMLSAT00000003611 description:"augustus_masked-LSalAtl2s197-processed-gene-0.4")

HSP 1 Score: 191.045 bits (484), Expect = 1.808e-49
Identity = 142/485 (29.28%), Postives = 240/485 (49.48%), Query Frame = 0

Query:  420 LRFSRIAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSIALISAMLVAMYLLSPTLTIVVAILLPSVVFVMY--YYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFS-ERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFGWQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFEL------MDAKPHQYGSDDAPIENGDIEISDLTFSYDGKT-TVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQL 894
            L  +   +K  + I  + Y  I+  P+S FD  P G++++R + D           I  +L    L   + + + ++S     ++  L  S+VF++    Y   S    R      + I S  SES+ G+S I+  G + +F  E    +          I+    + +R  ++ +  + +    AI      E++G G +   ISY   +T+ L  L ++ S ++  I+A ERL E        + + H+  S + P   G +E  + +  Y   +  VL  IN ++  G  + +VG TG+GKS+L+  +       +G+I + G+ IS+L  + +R  + ++ Q+P + S + R N+      SD  IW  L  V L +Y++ L  GL+ +I  G + LS+GQ+QL+ LAR L+   +ILILDEATA +D  T+E++Q  +     + TI+ IAHRL TI D D ILVL +G V E G+  +L
Sbjct:  902 LSVAMFTLKASKVIHNQTYDRIMRAPISFFDSTPQGRILNRFSKDISICDNILGSNIRQWLX--CLFXFLGIVILIVSVLPLFLLFALPTSLVFILIQNIYVASSRQLKRLQSVTRSPIYSHFSESLNGLSSIRAYGAQSKFILESINKIDTNQRCNYPSIIANRWLAMR--LETIGNLCIFG-XAILTMTNPELVGPGKVGLVISYALILTQNLNWLXRQTSEIETNIVAVERLKEYAGLDIEKEWRLHKDTSYNWP-SQGKVEFKNYSLRYKANSDLVLKKINFTIFGGERVGIVGRTGAGKSSLSVALFRIVEAANGQILIDGKDISTLGLHDLRESLTVIPQEPLLFSGTLRSNLDPENAFSDHDIWNTLGSVHLKEYIRDLKDGLNHSISEGGLNLSSGQRQLMCLARALLRSCKILILDEATAAVDWETDEKIQETIRCYFPSCTILTIAHRLKTIIDYDKILVLDKGTVIEFGSPNEL 1380          

HSP 2 Score: 115.931 bits (289), Expect = 2.700e-26
Identity = 88/291 (30.24%), Postives = 136/291 (46.74%), Query Frame = 0

Query:   49 YQGLMIWPMLAVAWLFNIIERGAAAWKRIKEVLDETSELQDGDTALPDTPQTLSITLDQ----------FTWRGHDVP-ALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDR----AQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNALV 324
            Y   M  PM    ++         + KRI ++L  + ELQ    A+   P  ++  +DQ          F W   D    L +I + ++ G +  I G VGSGKS+L+S IL       GKV   G             ++A V Q  ++ + S+ +NI  GKP    E         C+  D+     G ET +GE+GI LSGGQ+QRIS+ARA+  DA++ I D+ LSA+D +    +  N+ +      + +T +++ H +S L     I V+ KG I   G +  L+
Sbjct:  494 YINKMKMPMAXFPFVIVXAISATVSLKRINQLL-TSDELQKD--AVERVPMKINQKIDQGDAIVIRDGNFKWSTEDSENTLSNINLRIKHGSLTAIVGTVGSGKSSLISAILGEMVKKSGKVRIKG-------------QIAYVPQESWMQNTSLKNNILFGKP-YDEEWYNQVLEYCCLTYDLSLLPAGDETEIGERGINLSGGQRQRISLARAIYSDADVYIFDNPLSALDSQVGKSVFNNVLNNNTGIIKDKTRLLVTHGISYLPHVHHIAVMLKGEIIHEGTYQELL 767          

HSP 3 Score: 106.686 bits (265), Expect = 1.752e-23
Identity = 77/263 (29.28%), Postives = 126/263 (47.91%), Query Frame = 0

Query:   67 IERGAAAWKRIKEV--LDETSELQDGDTALPDTPQTLSITLDQFT--WRGHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDA--TREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNAL 323
            IE    A +R+KE   LD   E +       + P    +    ++  ++ +    L+ I   +  G+ +GI G  G+GKS+L   + R  +   G++   G  +    + + R  L V+ Q P LFS ++  N+    P+   +  +I        + E I   ++G    + E G+ LS GQ+Q + +ARALL   +ILILD+A +AVD  T+  I + +       T + IAHRL  +   D+I+VL KG + E G  N L
Sbjct: 1121 IETNIVAVERLKEYAGLDIEKEWRLHKDTSYNWPSQGKVEFKNYSLRYKANSDLVLKKINFTIFGGERVGIVGRTGAGKSSLSVALFRIVEAANGQILIDGKDISTLGLHDLRESLTVIPQEPLLFSGTLRSNL---DPENAFSDHDIWNTLGSVHLKEYIRDLKDGLNHSISEGGLNLSSGQRQLMCLARALLRSCKILILDEATAAVDWETDEKIQETIRCYFPSCTILTIAHRLKTIIDYDKILVLDKGTVIEFGSPNEL 1380          

HSP 4 Score: 96.2857 bits (238), Expect = 2.922e-20
Identity = 70/241 (29.05%), Postives = 120/241 (49.79%), Query Frame = 0

Query:  666 DAPIENGD-IEISDLTFSY---DGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRAL----SSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKK 898
            +  I+ GD I I D  F +   D + T L+ IN  +K G   A+VG  GSGKS+L S ++G    +SG++++ G+             IA V Q+  + + S + N+  G+   +E   Q L+   L   +  LP G +T IG   + LS GQ+Q ++LAR +     + I D   + +DS   + V   +    + +    T +++ H +S +    +I V+ +G +  +G +Q+LL KK
Sbjct:  544 NQKIDQGDAIVIRDGNFKWSTEDSENT-LSNINLRIKHGSLTAIVGTVGSGKSSLISAILGEMVKKSGKVRIKGQ-------------IAYVPQESWMQNTSLKNNILFGKPYDEEWYNQVLEYCCLTYDLSLLPAGDETEIGERGINLSGGQRQRISLARAIYSDADVYIFDNPLSALDSQVGKSVFNNVLNNNTGIIKDKTRLLVTHGISYLPHVHHIAVMLKGEIIHEGTYQELLEKK 770          

BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000002221 (supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 gene:EMLSAG00000002221 transcript:EMLSAT00000002221 description:"maker-LSalAtl2s1420-augustus-gene-0.12")

HSP 1 Score: 182.185 bits (461), Expect = 1.284e-46
Identity = 136/492 (27.64%), Postives = 238/492 (48.37%), Query Frame = 0

Query:  426 AIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSIALISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFGWQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFE-----------LMDAKPHQYGSDDAPIENGDIEISDLTFSY-DGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLA-KKGRYWQM 904
             ++  Q +  ++  SI+  P+S FD  P G++++R+  D + L      V+  ++     + + L+ + + +P   I  ++++    F+   Y   S    R      + I S  SE++ G + I+  GQ   F     S  D +         ++  +L   ++++  + + + AA+    G + +  G++   +SY   VT  L  L++  S ++  I+A ER+ E           + D KP +    D P   G+I   + +  Y +G   VL  ++  ++ G  + +VG TG+GKS+    M       +G I + G  I+ L  + +RS I ++ QDP + S S R N+      ++  I +A+    L  ++  L  GL+  +  G   LS GQ+QL+ LAR L+ R R+LILDEATA +D  T+  +Q+ + S     T++ IAHRL+TI D   ILVL  G   E G   +LLA KK +++ M
Sbjct: 1068 CMEAAQRLHNQMLESILKSPMSFFDTTPQGRILNRLGKDLDVLDSVMPMVLRGWISCFLGVLSSLIVVMVTTPVFIIPASLIIICYFFIQRIYVATSRQLKRLESSSRSPIXSFFSETVSGAATIRAYGQSSTFISESESKVDDNQKANFP-ATVSNRWLAVRLEVVGNLIVFT-AALLAVLGRDSLSPGLVGLSVSYALAVTASLNWLVRMASEVETNIVAVERIQEYTKAEKEAPWIIEDTKPDE----DWP-RKGEISFKNYSTRYREGLDYVLKNVSLDIEGGEKIGIVGRTGAGKSSFTLSMFRIIEPVTGNIIIDGVDITKLGLHQLRSRITIIPQDPVLFSGSLRRNLDPLDEYNETNIMEAISHSHLKPFIDSLKDGLEYHVSEGGENLSLGQRQLICLARALLRRTRVLILDEATAAVDLETDNLIQKTIRSEFKDSTVITIAHRLNTIMDYSKILVLKNGERVEYGTVAELLADKKSQFYSM 1552          

HSP 2 Score: 120.168 bits (300), Expect = 1.357e-27
Identity = 83/259 (32.05%), Postives = 131/259 (50.58%), Query Frame = 0

Query:   75 KRIKEVLDETS---ELQDGDTALPDTPQTLSITLDQFTWRG-HDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLAC-IDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRA----QHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNALV 324
            KRI + ++      E  +  TA PD    +++      W    D   L D+++D+  G ++ + G VGSGKS+LLS IL   D + G +   G+             +A   Q  ++ + S+ +NI   K     +  R     AC +  D+     G ET +GEKGI LSGGQKQR+S+ARA+   ++I +LDD LSAVD     HI  N+   +    + +T V++ H ++ L   D+IIV++ G + E G +  L+
Sbjct:  607 KRINKFMNSEEIDEEAVEKKTAYPDDKFAINLEKACLKWESDEDKNILSDVSLDIEVGSLVAVVGTVGSGKSSLLSAILGEMDKVSGLITVRGS-------------IAYGAQQAWVLNTSLKNNILFNKSYDGDKYTRIVE--ACALKSDLDMLPGGDETEIGEKGINLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVDSHVGKHIYDNVISSSSGILKDKTRVMVTHGVTYLPFTDKIIVMKDGRVSEIGTYKELL 850          

HSP 3 Score: 112.849 bits (281), Expect = 2.607e-25
Identity = 83/277 (29.96%), Postives = 138/277 (49.82%), Query Frame = 0

Query:   59 AVAWLFNI---IERGAAAWKRIKEVLDETSE---LQDGDTALPDTPQTLSITLDQFTWR---GHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATRE-EIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNALVA 325
            ++ WL  +   +E    A +RI+E      E   + +      D P+   I+   ++ R   G D   L+++++D+  G+ +GI G  G+GKS+    + R  +P+ G +   G  + +  + + R ++ ++ Q P LFS S+  N  L   D   E  I  A   + +   I   ++G E  V E G  LS GQ+Q I +ARALL    +LILD+A +AVD  T++ I K +    +  T + IAHRL+ +    +I+VL+ G   E G    L+A
Sbjct: 1270 SLNWLVRMASEVETNIVAVERIQEYTKAEKEAPWIIEDTKPDEDWPRKGEISFKNYSTRYREGLDY-VLKNVSLDIEGGEKIGIVGRTGAGKSSFTLSMFRIIEPVTGNIIIDGVDITKLGLHQLRSRITIIPQDPVLFSGSLRRN--LDPLDEYNETNIMEAISHSHLKPFIDSLKDGLEYHVSEGGENLSLGQRQLICLARALLRRTRVLILDEATAAVDLETDNLIQKTIRSEFKDSTVITIAHRLNTIMDYSKILVLKNGERVEYGTVAELLA 1543          

HSP 4 Score: 100.138 bits (248), Expect = 2.101e-21
Identity = 108/501 (21.56%), Postives = 222/501 (44.31%), Query Frame = 0

Query:  425 IAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEF--YVQVIASFLKSIALISAMLVAMYLLSPTL-------TIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLT--TEVKIVKINGIFLRPLIDLMSGIALLSLAAIFGWQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDA---------KPHQYGSDDAPIENGDIEISDLTFSYDGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGT----EERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKKGRY 901
            + +KI  ++   +Y   +  P S    +  G++V+ ++ D + + +   Y+  + S    I       +A+YLL  TL        +V+ +L+P   F+    +   +   ++  + +  +N V    +QG+ +++L   EQ F +   ++  + +   T +  ++    F+      +  ++L++ A         V+     +  ++    +  PL  L   +  +  A ++ +R+ + M++         K   Y  D   I   ++E + L +  D    +L+ ++  ++ G  +A+VG  GSGKS+L S ++G     SG I              +R  IA   Q   VL+ S + N+   ++   +   + ++   L   +  LP G +T IG   + LS GQKQ ++LAR +     I +LD+  + +DS       + V  + S +    T V++ H ++ +   D I+V+  G V E G +++LL +KG +
Sbjct:  384 VGMKIKTSLISTIYRKALRVPTSTKKNISTGEIVNLMSVDAQKIVDLMPYINTVWSAPFQIT------IAIYLLWQTLGPSVLAGVLVMILLIPFNGFIASRTKTLQTNQMKEKDERIKLLNEV----VQGIKIVKLYAWEQSFLDIISNVRSKEVKILTHIGYLQAGNSFIWTCAPFL--VSLVTFATFILSSPENVLDSEKAFVCLTLFNILRFPLSMLPMIIGSMVLAGVSIKRINKFMNSEEIDEEAVEKKTAYPDDKFAI---NLEKACLKWESDEDKNILSDVSLDIEVGSLVAVVGTVGSGKSSLLSAILGEMDKVSGLI-------------TVRGSIAYGAQQAWVLNTSLKNNILFNKSYDGDKYTRIVEACALKSDLDMLPGGDETEIGEKGINLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVDSHVGKHIYDNVISSSSGILKDKTRVMVTHGVTYLPFTDKIIVMKDGRVSEIGTYKELLRQKGAF 856          

BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000003104 (supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-1 gene:EMLSAG00000003104 transcript:EMLSAT00000003104 description:"maker-LSalAtl2s174-augustus-gene-3.18")

HSP 1 Score: 169.859 bits (429), Expect = 4.382e-43
Identity = 103/303 (33.99%), Postives = 170/303 (56.11%), Query Frame = 0

Query:   33 VANGTLTLGELTAFTLYQGLMI---WPMLAVAWLFNIIERGAAAWKRIKEVLDETSELQDGDTA----LPDTPQTLSITLDQFTWRGHDVPA--LRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNALVAT 326
            ++NG LT+G+L    +  GL+     P+  +  ++  I +     + + +++   S++     A      +  +  SIT D   + G+++       ++  + +GK + I G  GSGKSTL+ L+ RF +P  G ++ G  ++ E  +   RR++++V Q   LF+ +I  NI  G  + + E++   A+LA ID  I  + +GY T VGE+G+ LSGG+KQR++IARA L D+ I+I D+A S++D  TE  I+K L      +T ++IAHRLS +  ADEI VL  G + ERG H  L+ T
Sbjct:  290 ISNGALTVGDLI---MVNGLLFQLSLPLNFLGSVYREIRQSLIDMQVMFQLMATPSKITSSKGATEINFINNMEDASITFDDVKF-GYNIDKNIANGLSFSVESGKTIAIVGESGSGKSTLVRLLYRFYEPQLGSIKIGNYNINEVTLDSLRRQISIVPQDCVLFNDTIFHNIKYGNLNCSDEDVYKVAKLAEIDNAIRSWPQGYLTQVGERGLKLSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTSGKTAIIIAHRLSTVVHADEIFVLSNGKVIERGTHEELLNT 588          

HSP 2 Score: 160.229 bits (404), Expect = 3.701e-40
Identity = 97/293 (33.11%), Postives = 163/293 (55.63%), Query Frame = 0

Query:  612 IGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAKPHQYGSDDAP--------IENGDIEISDLTFSYDGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGR-NVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLL 895
            + VG L      L +++ PL  L      ++Q+++  + +F+LM A P +  S            +E+  I   D+ F Y+    +  G++ SV+ G  +A+VG +GSGKSTL  L+  FY  Q G I++G   I+ +T +++R  I++V QD  + + +   N+  G  N SDE +++     ++ + ++  P G  T +G   + LS G+KQ +A+AR  ++   I+I DEAT+++DS TE  + +AL  +    T ++IAHRLST+  AD I VL  G V E+G H++LL
Sbjct:  295 LTVGDLIMVNGLLFQLSLPLNFLGSVYREIRQSLIDMQVMFQLM-ATPSKITSSKGATEINFINNMEDASITFDDVKFGYNIDKNIANGLSFSVESGKTIAIVGESGSGKSTLVRLLYRFYEPQLGSIKIGNYNINEVTLDSLRRQISIVPQDCVLFNDTIFHNIKYGNLNCSDEDVYKVAKLAEIDNAIRSWPQGYLTQVGERGLKLSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTSGKTAIIIAHRLSTVVHADEIFVLSNGKVIERGTHEELL 586          

BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000010048 (supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1 gene:EMLSAG00000010048 transcript:EMLSAT00000010048 description:"snap_masked-LSalAtl2s662-processed-gene-1.13")

HSP 1 Score: 166.777 bits (421), Expect = 1.283e-42
Identity = 105/304 (34.54%), Postives = 159/304 (52.30%), Query Frame = 0

Query:  647 AGERLFELMDAKPH--------QYGSDDAPIENGDIEISDLTFSYDGKTTV--LTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRN--VSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKK-GRYWQMYQLQQTKAHLAELEDIANSLGFAAGELSYGKQD 937
            A   +F+++ + P         Q   D AP   G I   ++ F Y  + TV  L+G++     G  LALVG +G GKST+  L+  FY    G + + G  I++L  + +RS I +V Q+P +   S +EN+T+G    +S++ I       +  D++Q LP   DT +G     LS GQKQ +A+AR L+  P IL+LDEA++ +DS +E  VQ AL   R   T +++AHRLSTI  AD ILV+  G+  + G H+ L + K G Y  +   Q  +       D    L     EL+Y ++D
Sbjct:  210 AASSVFQIIQSTPAIKSDYDHLQRQQDKAPPFTGRITFKNVHFEYPSRPTVKVLSGLSFEASPGKTLALVGPSGCGKSTVIQLIQRFYDPSFGVVSIDGEDITTLDPHWLRSHIGIVGQEPVLFEYSIKENITMGLQGEISEKMIDDTCKAANAYDFIQRLPKKYDTIVGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDKARKGRTTIIVAHRLSTIRSADAILVMKDGYRVDYGTHESLKSNKTGLYCSLVNAQDCQV------DQDEGLPLFNPELNYEEED 507          

HSP 2 Score: 146.747 bits (369), Expect = 3.704e-36
Identity = 100/301 (33.22%), Postives = 156/301 (51.83%), Query Frame = 0

Query:   31 YMVANGTLTLGE----LTAFTLYQGLMIWPMLAVAWLFNIIERGAAAWKRIKEVLDETSELQDGDTALPDTPQTLSITLDQFTWRGHDVPALR---DIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALG-KPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNAL 323
            + V  G + +G+    + AF + +G       A + +F II+   A    IK   D     QD        P T  IT     +     P ++    ++ +   GK L + GP G GKST++ LI RF DP  G V   G  +        R  + +V Q P LF  SI +NI +G + + + + I    + A   + I +  + Y+T+VGEKG  LSGGQKQRI+IARAL+ +  IL+LD+A SA+D ++E  +   L    + +TT+++AHRLS + +AD I+V++ G+  + G H +L
Sbjct:  185 FSVLMGAMNIGQASPYVEAFAIARG-------AASSVFQIIQSTPA----IKSDYDHLQRQQD-----KAPPFTGRITFKNVHFEYPSRPTVKVLSGLSFEASPGKTLALVGPSGCGKSTVIQLIQRFYDPSFGVVSIDGEDITTLDPHWLRSHIGIVGQEPVLFEYSIKENITMGLQGEISEKMIDDTCKAANAYDFIQRLPKKYDTIVGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDKARKGRTTIIVAHRLSTIRSADAILVMKDGYRVDYGTHESL 469          

BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000008248 (supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1 gene:EMLSAG00000008248 transcript:EMLSAT00000008248 description:"maker-LSalAtl2s498-snap-gene-2.25")

HSP 1 Score: 163.696 bits (413), Expect = 5.486e-41
Identity = 134/478 (28.03%), Postives = 234/478 (48.95%), Query Frame = 0

Query:  433 IRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTE---SLKEFYVQVIASFLKSIALISAMLVAMYLLSPTLTIVVAILLPSVV---FVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFGWQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFE---LMDAKPHQYGSDDAPI---ENGDIEISDLTFSY-DGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAK 897
            I  K+  +++  PLS FD  P G++++R + D +   +   F ++++      IA    +L  + ++   L     I+LP+V+    +  +Y   +    R      + I S  +E++ G+  I+  G    F +   +  D +       V I+  +L   ++ +  I L+   A+F          G++   +SY   VT  L  L+   + ++  +++ ER+ E   +    P+   + D P    E+G I+  +    Y  G   VL GIN ++++G  + +VG TG+GKS+L   +        G I + G  I  L    +RS I ++ QDP + S S R N+      +D  IW AL+   L  +V +L  GL+ ++  G   LS GQ+QL+ LAR ++ + +IL+LDEATA ID  T++ +Q  + S     T++ IAHR++TI D++ I+VL  G + E  + Q LLA 
Sbjct: 1035 IHGKLLENVLRAPLSFFDTNPLGRILNRFSKDIDVAXTTLPFNIRMM------IAQSFNVLGTIVIICIALPWFFVIILPAVICYALIQKFYISCARQVKRIESISRSPIYSHFAETLTGIPTIRAFGMVHHFIDENVNKIDFNAKCYFPTV-ISSRWLAVRLETLGNI-LVIFVALFSITSRGTTDPGMVGLSLSYALSVTTILNMLITVSTDVETNMVSVERIKEYENIPQEAPYDLPNSDPPPNWPEHGVIKFDNYKTRYRKGLDLVLKGINCTIQKGEKIGIVGRTGAGKSSLTLALFRIIEPSEGSIYIDGENIRFLGLGKLRSRITIIPQDPILFSGSLRMNLDPFEAFADRDIWIALEYSHLKSFVWNLGDGLNFSVLEGGRNLSVGQRQLICLARAILRKTQILVLDEATAAIDLETDDLIQSTIRSEFKDSTVLTIAHRINTIMDSNRIMVLDAGTIAEFDDPQNLLAN 1504          

HSP 2 Score: 108.612 bits (270), Expect = 5.676e-24
Identity = 79/267 (29.59%), Postives = 134/267 (50.19%), Query Frame = 0

Query:   67 IERGAAAWKRIKEVLDETSE----LQDGDTALPDTPQTLSITLDQFTWR---GHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNALVAT 326
            +E    + +RIKE  +   E    L + D   P+ P+   I  D +  R   G D+  L+ I   ++ G+ +GI G  G+GKS+L   + R  +P +G +   G ++    +G+ R ++ ++ Q P LFS S+  N+   +  A R+ I  A   + +   +    +G    V E G  LS GQ+Q I +ARA+L   +IL+LD+A +A+D  T+  I   +    +  T + IAHR++ +  ++ I+VL  G I E      L+A 
Sbjct: 1241 VETNMVSVERIKEYENIPQEAPYDLPNSDPP-PNWPEHGVIKFDNYKTRYRKGLDL-VLKGINCTIQKGEKIGIVGRTGAGKSSLTLALFRIIEPSEGSIYIDGENIRFLGLGKLRSRITIIPQDPILFSGSLRMNLDPFEAFADRD-IWIALEYSHLKSFVWNLGDGLNFSVLEGGRNLSVGQRQLICLARAILRKTQILVLDEATAAIDLETDDLIQSTIRSEFKDSTVLTIAHRINTIMDSNRIMVLDAGTIAEFDDPQNLLAN 1504          

HSP 3 Score: 108.227 bits (269), Expect = 6.726e-24
Identity = 69/212 (32.55%), Postives = 108/212 (50.94%), Query Frame = 0

Query:  117 ALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRA----QHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNALV 324
             L DI +D+  G ++ I G VGSGKS+LLS IL   + ++G +   G ++                Q P+L + ++ +NI  GK    ++  R       +  D+     G  T +GE+GI LSGGQK R+S+AR    + +I ILDD LSAVD     H+ +N+        +++T + + H    L   D+IIV++ G I E G +  L+
Sbjct:  634 TLEDIDLDIEKGSLVAIVGQVGSGKSSLLSGILGEMEIVRGSINVDGQTI-------------YAPQQPWLQNETLRNNILFGK-RFNKKLYRRVIDACALSPDLDMLPAGDLTEIGERGINLSGGQKARVSLARCTXNNGDIYILDDPLSAVDVHVGRHLFENVISSQTGLLKNKTRIFVTHGAIFLPQTDKIIVMKNGVISESGTYRDLI 831          

HSP 4 Score: 87.0409 bits (214), Expect = 2.127e-17
Identity = 93/381 (24.41%), Postives = 161/381 (42.26%), Query Frame = 0

Query:  679 LTFSYDGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTE----ERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKK-GRYWQM---YQLQQTKAHLAE-------LEDIANSLGFAAGELSY---GKQDSAQVQLTDI---------------TDVMATFGADAAD-VVSGNKDKR--ENNFLYAGEFDSLNIQANYIAADEKDADSVGVSALYSMGAFAVGAGYVSQDAGTD 1023
            L++  D     L  I+  +++G  +A+VG  GSGKS+L S ++G   +  G I + G+ I +              Q P + + + R N+  G+  + +   + +D   L+  +  LP G  T IG   + LS GQK  ++LAR       I ILD+  + +D        E V  + + L    T + + H    +   D I+V+  G + E G ++ L+ K+ G + Q    Y + + +  L         ++D+ +++G  + EL       Q      LTD+               + + +  G D  D VVS + ++R  E   + +G    LNI  NY       A   G+   +S   F++GA        TD
Sbjct:  624 LSWETDEGLNTLEDIDLDIEKGSLVAIVGQVGSGKSSLLSGILGEMEIVRGSINVDGQTIYA-------------PQQPWLQNETLRNNILFGKRFNKKLYRRVIDACALSPDLDMLPAGDLTEIGERGINLSGGQKARVSLARCTXNNGDIYILDDPLSAVDVHVGRHLFENVISSQTGLLKNKTRIFVTHGAIFLPQTDKIIVMKNGVISESGTYRDLIEKENGEFAQFLINYLVDEKENILKNDQDLKTIIKDLESTVG-GSEELEKRLEAAQSDKSTALTDLIQGTKYLDENTSDQCSSIASRKGEDDLDEVVSNDLNERLIEEEKIESGGI-KLNIYLNYFKRTGLLASFFGILFYFSYQGFSLGANLWLSKWSTD 989          

BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000000752 (supercontig:LSalAtl2s:LSalAtl2s111:55855:93761:1 gene:EMLSAG00000000752 transcript:EMLSAT00000000752 description:"maker-LSalAtl2s111-augustus-gene-1.10")

HSP 1 Score: 141.739 bits (356), Expect = 4.202e-34
Identity = 133/509 (26.13%), Postives = 228/509 (44.79%), Query Frame = 0

Query:  426 AIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSIALISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFGWQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAG-ERLFELMDAKPHQYGS------DDAPIENGDIEISDLTFSYDGKTT-VLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKKGR-YWQMYQLQQTKAHLAE-LEDIANSL 924
             ++  QT+  +++  +       FD  P G++++R + D  S  E     + S        S + + + + +P + + + +LL  ++ +  YY + S    R      + + S ++ S+ G++ I+ M  E+   E F  L D H ++    + +N  F     DLM  +   S+ ++F +   +  G  V  +    L      +I+   R S   +  M   ER+ E  D  P + G       D +  + G IE S++   YDG T  VL G+                                   G+I + G  I  L+   +R  I+++ QDP +   + R+N+       + AIW AL+Q  L+  V  L  GL+T +  G    S GQ+QL  LAR ++ + ++LI+DEATAN+D  T+  +Q A+ +     T+  IAHRL T+ D+D ILV+  G ++E G    LL+     ++QM  + Q     AE L+ IA  L
Sbjct: 1130 CMRSSQTLHDRMFEKVAFTNSRFFDLNPNGRILNRFSKDIGSXDELLPPALLSG-------SGIFILISMTNPLIVVGIVVLLLILLTIRKYYLNASRAVKRLEGITRSPVFSQLASSLDGLTTIRSMKIEEMLIEEFDYLQDIHTSSYYSFLVVNRFFAF-CGDLMLSLFTASMVSMFLFYNRDATGGDVGLSLTLSLALCG--MIQWGLRQSAEVENFMTSVERVAEYGDL-PKEKGLKGDIKLDPSWPDKGVIEFSNVNLKYDGTTPYVLKGLTEP-------------------------------EGKIFIDGVNICRLSLQDVRKKISIIPQDPLLFKGTIRKNLDPFDEYGELAIWHALEQAKLSVAVSELEGGLETEVSEGGNNFSVGQRQLFCLARAILRKNKVLIMDEATANVDPMTDSLIQEAIRTEFKDCTVFTIAHRLYTVMDSDRILVMSDGEIKELGAPLDLLSDPSNIFYQM--VNQLGPSAAERLKKIAQGL 1594          

HSP 2 Score: 125.176 bits (313), Expect = 4.784e-29
Identity = 87/264 (32.95%), Postives = 144/264 (54.55%), Query Frame = 0

Query:   75 KRIKE--VLDETSELQD--GDTALPDTPQTLSITLDQFTWRGHDVP---ALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRA-----QHQTTVVIAHRLSALEAADEIIVLQK-GHIEERGKHNALVA 325
            KRI+E  +L+E  ++Q       LP   + L++ + + + +  D      L++I+  +  G++  I GPVG GKST++  +L  E P+         S GE  I   + +++  +Q  ++FS S+  NI +GKP    +  R   R+  ++ D+ ++ +G  T VGEKGI+LSGGQK RI++AR +   A+I ILDD LSAVD     H+ + L D         +T +++ H+L  L+ A+ II+L   G IE  G +  L++
Sbjct:  684 KRIEEFLLLNELRDVQSKINHVILPGRYEPLTVEVTKISGKWLDSSNEFTLKNISFSVEIGELCAIIGPVGCGKSTIIQSLLG-EFPV---------SYGEINI---KGRISYASQEAWIFSGSVRQNILMGKP-LIDKRYREVIRVCALEHDVREWPDGDYTFVGEKGISLSGGQKSRINLARCVYASADIYILDDPLSAVD----PHVGQQLFDTCIQKFLSDKTVILVTHQLQFLKNANNIILLNSDGEIEASGTYEKLMS 929          

HSP 3 Score: 106.301 bits (264), Expect = 2.665e-23
Identity = 62/189 (32.80%), Postives = 102/189 (53.97%), Query Frame = 0

Query:  665 DDAPIENGDIEISDLTFSYDG-KTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRAL 852
            D +  + G +E S+++  Y   +  VL G+N        + ++G TG+GKS++ S +      + GEI + G  I  +    +R  I+++ QDP + + S R+N+      +D  IW AL+Q  L D V  L  GLD+ +       S GQ+QL  LA  ++ R ++LI+DEATAN+D  T+  +Q A+
Sbjct:   41 DPSWPDKGVVEFSNVSMRYSQHQPNVLKGLNFKTNSFEKIGIIGRTGAGKSSIISALFRLAEPE-GEIFIDGLDICKVGLLDIRKKISIIPQDPILFNGSIRKNLDPFNEFTDVQIWNALEQAKLYDIVVDLGHGLDSVVLEFGSNFSVGQRQLFCLAXAILRRNKVLIMDEATANVDPFTDSLIQEAI 228          

HSP 4 Score: 102.449 bits (254), Expect = 3.955e-22
Identity = 112/466 (24.03%), Postives = 209/466 (44.85%), Query Frame = 0

Query:  455 GKLVSRVTNDTESLKEFYVQVIASFLKSIALISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDIN-SVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLM----SGIALLSLAAIFGWQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAK--------PHQYGSDDAPIENGDIEISDLTFSY--DGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEER-----VQRALSSLRHTMTIVVIAHRLSTIADADNILVLHR-GHVEEQGNHQQLLAKKG 899
            G++V+ ++ND        V +   ++  I  I  ML+  Y          A+L+  + F  Y  +  S      +    TDI   +M+E + G+ +I++   E  F +         L T  +    N   L P+  LM      I    +  IFG    + I + + + F S +   +E L+  M+R   +++ ++    L EL D +        P +Y       E   +E++ ++  +        L  I+ SV+ G   A++G  G GKST+   ++G +PV  GEI + GR             I+   Q+  + S S R+N+ +G+ + D+   + +    L   V+  P G  T +G   ++LS GQK  + LAR +     I ILD+  + +D    ++     +Q+ LS      T++++ H+L  + +A+NI++L+  G +E  G +++L+++ G
Sbjct:  516 GQMVNLLSNDVNRFDNSTVFLQYLWVAPIQFICVMLITSYFAGIEAVAGGALLIFFIFFQTYMGKMFSKLRLMTASK--TDIRIQIMNEILDGIKVIKMYAWETPFVQ---------LVTNAR----NRFVLLPVFLLMVLFGVEINAQKIFLIFGL--FDAIKLPLTHFFPSAISASSEALVS-MKR---IEEFLL----LNELRDVQSKINHVILPGRY-------EPLTVEVTKISGKWLDSSNEFTLKNISFSVEIGELCAIIGPVGCGKSTIIQSLLGEFPVSYGEINIKGR-------------ISYASQEAWIFSGSVRQNILMGKPLIDKRYREVIRVCALEHDVREWPDGDYTFVGEKGISLSGGQKSRINLARCVYASADIYILDDPLSAVDPHVGQQLFDTCIQKFLSD----KTVILVTHQLQFLKNANNIILLNSDGEIEASGTYEKLMSQSG 932          

HSP 5 Score: 79.7221 bits (195), Expect = 4.108e-15
Identity = 52/164 (31.71%), Postives = 84/164 (51.22%), Query Frame = 0

Query:  156 QGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATRE-EIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERG 318
            +GK+   G ++    + + R+K++++ Q P LF  +I  N  L   D   E  I  A   A +   + +   G ET V E G   S GQ+Q   +ARA+L   ++LI+D+A + VD  T+  I + +    +  T   IAHRL  +  +D I+V+  G I+E G
Sbjct: 1398 EGKIFIDGVNICRLSLQDVRKKISIIPQDPLLFKGTIRKN--LDPFDEYGELAIWHALEQAKLSVAVSELEGGLETEVSEGGNNFSVGQRQLFCLARAILRKNKVLIMDEATANVDPMTDSLIQEAIRTEFKDCTVFTIAHRLYTVMDSDRILVMSDGEIKELG 1559          

HSP 6 Score: 71.2478 bits (173), Expect = 1.307e-12
Identity = 47/165 (28.48%), Postives = 89/165 (53.94%), Query Frame = 0

Query:  113 HDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHI 277
            H    L+ +     + + +GI G  G+GKS+++S + R  +P +G++   G  + +  + + R+K++++ Q P LF+ SI  N+     + T  +I  A   A + + +V    G +++V E G   S GQ+Q   +A A+L   ++LI+D+A + VD  T+  I
Sbjct:   62 HQPNVLKGLNFKTNSFEKIGIIGRTGAGKSSIISALFRLAEP-EGEIFIDGLDICKVGLLDIRKKISIIPQDPILFNGSIRKNLDPFN-EFTDVQIWNALEQAKLYDIVVDLGHGLDSVVLEFGSNFSVGQRQLFCLAXAILRRNKVLIMDEATANVDPFTDSLI 224          

BLAST of hypothetical protein vs. SwissProt
Match: gi|77454552|sp|P0AAG7.1|MDLB_ECO57 (RecName: Full=Multidrug resistance-like ATP-binding protein MdlB >gi|77454553|sp|P0AAG6.1|MDLB_ECOL6 RecName: Full=Multidrug resistance-like ATP-binding protein MdlB >gi|77454554|sp|P0AAG5.1|MDLB_ECOLI RecName: Full=Multidrug resistance-like ATP-binding protein MdlB)

HSP 1 Score: 578.941 bits (1491), Expect = 0.000e+0
Identity = 303/572 (52.97%), Postives = 401/572 (70.10%), Query Frame = 0

Query:  344 LARLLRYLLDDKKGFAIAAVLLLVAAVADVSGPWLIRIFLDDYLAKDNFPPTVLWGLALAYIFATVLSAALHYSYGLRFSRIAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSIALISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFGWQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAKPHQYGSDDAPIENGDIEISDLTFSYDGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKKGRYWQMYQLQQTKAHLA 915
            L RLL Y    +K   IA +++ VAA A+VSGP LI  F+D+ +AK+N P  V+ GLA AY+   + +A LHY+  L F+R A+ +VQ +R  V  + + QPLS FD  P G+++SRVTNDTE +++ YV V+A+ L+S AL+ AMLVAM+ L   + +V  ++ P V+ VM  YQ  S+P  R  R  L DIN   +E I GMS+IQ   Q+ RF ER G  +  H    ++ ++++G  LRPL+ L S + L  L  +FG+  S  I VGVLYAFISYLGR+ EPLIEL  + ++LQQA++AGER+FELMD    QYG+DD P+++G IE+ +++F+Y     VL  IN SV    F+ALVGHTGSGKSTLASL+MG+YP+  GEI+L GR +SSL+ +A+R G+AMVQQDP VL+ +F  NVTLGR++S+E +WQAL+ V LA+  + +  G+ T +G     LS GQKQLLALARVLVE P+ILILDEATA+IDSGTE+ +Q AL+++R   T+VVIAHRLSTI DAD ILVLHRG   EQG HQQLLA +GRYWQMYQLQ     LA
Sbjct:   11 LKRLLAYGSPWRKPLGIAVLMMWVAAAAEVSGPLLISYFIDNMVAKNNLPLKVVAGLAAAYVGLQLFAAGLHYAQSLLFNRAAVGVVQQLRTDVMDAALRQPLSEFDTQPVGQVISRVTNDTEVIRDLYVTVVATVLRSAALVGAMLVAMFSLDWRMALVAIMIFPVVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSSLILCGLLMLFGFSASGTIEVGVLYAFISYLGRLNEPLIELTTQQAMLQQAVVAGERVFELMDGPRQQYGNDDRPLQSGTIEVDNVSFAYRDDNLVLKNINLSVPSRNFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSALRQGVAMVQQDPVVLADTFLANVTLGRDISEERVWQALETVQLAELARSMSDGIYTPLGEQGNNLSVGQKQLLALARVLVETPQILILDEATASIDSGTEQAIQHALAAVREHTTLVVIAHRLSTIVDADTILVLHRGQAVEQGTHQQLLAAQGRYWQMYQLQLAGEELA 582          

HSP 2 Score: 141.739 bits (356), Expect = 1.131e-33
Identity = 93/292 (31.85%), Postives = 157/292 (53.77%), Query Frame = 0

Query:   34 ANGTLTLGELTAFTLYQGLMIWPMLAVAWLFNIIERGAAAWKRIKEVLDETSELQDGDTALPDTPQTLSITLDQFTWRGHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNALVA 325
            A+GT+ +G L AF  Y G +  P++ +     ++++   A +R+ E++D   + Q G+   P    T+ +    F +R  ++  L++I + + +   + + G  GSGKSTL SL++ +    +G++   G  L        R+ +A+V Q P + + +   N+ LG+ D + E +  A     + E      +G  T +GE+G  LS GQKQ +++AR L+   +ILILD+A +++D  TE  I   L    +H T VVIAHRLS +  AD I+VL +G   E+G H  L+A
Sbjct:  275 ASGTIEVGVLYAFISYLGRLNEPLIELTTQQAMLQQAVVAGERVFELMDGPRQ-QYGNDDRPLQSGTIEVDNVSFAYRDDNL-VLKNINLSVPSRNFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSALRQGVAMVQQDPVVLADTFLANVTLGR-DISEERVWQALETVQLAELARSMSDGIYTPLGEQGNNLSVGQKQLLALARVLVETPQILILDEATASIDSGTEQAIQHALAAVREHTTLVVIAHRLSTIVDADTILVLHRGQAVEQGTHQQLLA 563          

BLAST of hypothetical protein vs. SwissProt
Match: gi|25008733|sp|Q8K984.1|MDLB_BUCAP (RecName: Full=Multidrug resistance-like ATP-binding protein MdlB)

HSP 1 Score: 457.988 bits (1177), Expect = 1.169e-147
Identity = 248/567 (43.74%), Postives = 370/567 (65.26%), Query Frame = 0

Query:  343 VLARLLRYLLDDKKGFAIAAVLLLVAAVADVSGPWLIRIFLDDYLAKDNFPPTVLWGLALAYIFATVLSAALHYSYGLRFSRIAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSIALISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFGWQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAKPHQYGSDDAPIENGDIEISDLTFSY-DGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKKGRYWQMYQLQ 908
            +L RL+ Y +  KK   +A  LLL  A ++V GP LI  F+++ L++      ++  + + +I   +L+   +Y   + F++IA+ IV  +R  V  + +NQP+S FD  P G+++S+VTNDTE +KE Y  V  +F +SI LI  +L AM+ L   + I+   ++P V+ VM  YQ+ S+P  R+ R  + +IN+  +E+I GM++IQ   Q+ RF       ++ H    +KI+K++G  LRPL+ L+S + L S   +F +    V  VGVLYAFI+YLGR+ EPLI +  + S+LQQAI+AGER+F L+D+   +YG+++  I++G I I +L+F Y +    +L  IN  +    F+A VG TGSGKSTLA+L+MG+YP++ G+I L  ++I+ ++ + +R  I MVQQDP VL+ +F  N+TLG+ +S+E IW  L  V L+  VQ +P G+ + +G     LS GQKQLLA+AR+LV  P+ILILDEATANIDSGTE+ +Q  LSS+R   T+VVIAHRLST+ +AD I+VL +G + E G H+QLL KKG YW+MY  Q
Sbjct:   10 ILKRLIIYAIPWKKKIILAFFLLLSGATSEVLGPILISYFINNILSQHQLNFQLILIIIVIFIMLQILAVFFNYFQSILFNKIAVGIVNKLRNDVMKAALNQPISEFDSQPIGQMISKVTNDTEVIKELYDTVGPTFFRSITLIIIILFAMFTLEWHMAIITIFIIPLVIIVMSIYQYYSTPLLRNVRYYVANINNKFNETINGMNVIQQFRQQTRFENNIKESSELHYLARMKILKLDGFLLRPLLSLLSALVLCSFMFLFSYFSIGVYEVGVLYAFITYLGRLNEPLISITIQQSILQQAIVAGERIFSLIDSPKQKYGNNEEEIKSGKINIKNLSFKYKESGENILNNINIYIPSKSFVAFVGQTGSGKSTLANLLMGYYPIKHGKIYLDDKSINCISHDVLRKNILMVQQDPIVLADTFSSNITLGKKISEEKIWNVLKTVHLSSLVQSMPKGIYSILGEEGNNLSLGQKQLLAIARILVRNPKILILDEATANIDSGTEKLIQTTLSSIRAKTTLVVIAHRLSTVIEADMIVVLKKGKIVELGTHKQLLEKKGFYWKMYNFQ 576          

HSP 2 Score: 119.783 bits (299), Expect = 1.178e-26
Identity = 88/289 (30.45%), Postives = 147/289 (50.87%), Query Frame = 0

Query:   36 GTLTLGELTAFTLYQGLMIWPMLAVAWLFNIIERGAAAWKRIKEVLDETSELQDGDTALPDTPQTLSITLDQFTWRGHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNALV 324
            G   +G L AF  Y G +  P++++    +I+++   A +RI  ++D   + + G+         ++I    F ++      L +I I + +   +   G  GSGKSTL +L++ +     GK+     S+        R+ + +V Q P + + + + NI LGK   + E+I    +   +   +    +G  +++GE+G  LS GQKQ ++IAR L+ + +ILILD+A + +D  TE  I   L       T VVIAHRLS +  AD I+VL+KG I E G H  L+
Sbjct:  277 GVYEVGVLYAFITYLGRLNEPLISITIQQSILQQAIVAGERIFSLIDSPKQ-KYGNNEEEIKSGKINIKNLSFKYKESGENILNNINIYIPSKSFVAFVGQTGSGKSTLANLLMGYYPIKHGKIYLDDKSINCISHDVLRKNILMVQQDPIVLADTFSSNITLGK-KISEEKIWNVLKTVHLSSLVQSMPKGIYSILGEEGNNLSLGQKQLLAIARILVRNPKILILDEATANIDSGTEKLIQTTLSSIRAKTTLVVIAHRLSTVIEADMIVVLKKGKIVELGTHKQLL 563          

BLAST of hypothetical protein vs. SwissProt
Match: gi|11386922|sp|P57552.1|MDLB_BUCAI (RecName: Full=Multidrug resistance-like ATP-binding protein MdlB)

HSP 1 Score: 443.736 bits (1140), Expect = 3.239e-142
Identity = 241/570 (42.28%), Postives = 375/570 (65.79%), Query Frame = 0

Query:  343 VLARLLRYLLDDKKGFAIAAVLLLVAAVADVSGPWLIRIFLDDYLAKDNFPPTVLWGLALAYIFATVLSAALHYSYGLRFSRIAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSIALISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFGWQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAKPHQYGSDDAPIENGDIEISDLTFSY-DGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKKGRYWQMYQLQQTK 911
            +L RLL Y+   KK   +A + LL  + ++V GP LI  F+++ L+K      ++  +   +I   +LS  L+Y   + F++IA++ +  +R+ V  + + QP+S FD  P G+++S+VTNDTE++KE Y  V  +  +SI LI  +L AM+ L   + +V   +LP V+ +M  YQ+ S+P  R  R  L +IN+  +E+I GM++IQ   Q++RF E+    +D H  + +KI++++G  LRPL+ L+S + L +   +F +       VGVLYAFI+YLGR+ EPLI +  + S+LQQ+I+AGER+F L+D+   +YG +   +++G I I +++F + +    +L  IN  +    F+A VGHTGSGKSTLA+L+MG+YP+++G+I L  ++I S++ + +R  + MVQQDP VLS +F  N+TLGR + +E +W  LD V L+D V+ +P G+ + +G     LS GQKQLLA+ARVLV  P++LILDEATANIDSGTE+ +Q+ L S+R   T+++IAHRLSTI +AD+I+VL +G + E G H+QLL KK  Y++MY+ Q  K
Sbjct:   10 ILKRLLIYVKPHKKKLILAFIFLLSGSTSEVLGPILISYFINNILSKHQLHLLIILTIITLFIILQILSVFLNYFQSILFNKIAVESINKLRQDVMYAALQQPISEFDSQPIGQMISKVTNDTEAVKELYDTVGPTLFRSIILIFIILFAMFTLEWHMALVALFILPLVITIMLVYQYYSTPLLRKVRYYLAEINNKFNETINGMNVIQQFCQQRRFQEKIKKSSDLHYMSRMKILRLDGFLLRPLLSLLSSMILCNFMFLFSFFPVGAFEVGVLYAFITYLGRLNEPLIAITIQQSVLQQSIVAGERIFSLIDSPKQKYGKNKDLLKSGKINIQNVSFYHKNCNKNILENINIKISSKSFVAFVGHTGSGKSTLANLIMGYYPLKNGKIYLDDKSIDSISHSVLRRNVLMVQQDPIVLSDTFFYNITLGRKIPEEKVWNILDTVHLSDLVKSMPKGIYSLLGEEGNNLSVGQKQLLAIARVLVAYPKVLILDEATANIDSGTEQLIQKTLLSIRKNCTLIIIAHRLSTIIEADSIIVLKKGKIVEFGTHEQLLTKKSCYYKMYKFQSCK 579          

HSP 2 Score: 132.109 bits (331), Expect = 1.271e-30
Identity = 93/297 (31.31%), Postives = 152/297 (51.18%), Query Frame = 0

Query:   36 GTLTLGELTAFTLYQGLMIWPMLAVAWLFNIIERGAAAWKRIKEVLDETSELQDGDTALPDTPQTLSITLDQFTWRGHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGK--PDATREEIRAAARLACIDEDIVQ-FREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNALVATNAT 329
            G   +G L AF  Y G +  P++A+    +++++   A +RI  ++D   +    +  L  + + ++I    F  +  +   L +I I + +   +   G  GSGKSTL +LI+ +     GK+     S+        RR + +V Q P + S +   NI LG+  P+     I     L+    D+V+   +G  +L+GE+G  LS GQKQ ++IAR L+   ++LILD+A + +D  TE  I K L    ++ T ++IAHRLS +  AD IIVL+KG I E G H  L+   + 
Sbjct:  277 GAFEVGVLYAFITYLGRLNEPLIAITIQQSVLQQSIVAGERIFSLIDSPKQKYGKNKDLLKSGK-INIQNVSFYHKNCNKNILENINIKISSKSFVAFVGHTGSGKSTLANLIMGYYPLKNGKIYLDDKSIDSISHSVLRRNVLMVQQDPIVLSDTFFYNITLGRKIPEEKVWNILDTVHLS----DLVKSMPKGIYSLLGEEGNNLSVGQKQLLAIARVLVAYPKVLILDEATANIDSGTEQLIQKTLLSIRKNCTLIIIAHRLSTIIEADSIIVLKKGKIVEFGTHEQLLTKKSC 568          

BLAST of hypothetical protein vs. SwissProt
Match: gi|31340215|sp|Q89A96.1|MDLB_BUCBP (RecName: Full=Multidrug resistance-like ATP-binding protein MdlB)

HSP 1 Score: 434.106 bits (1115), Expect = 1.348e-138
Identity = 225/571 (39.40%), Postives = 338/571 (59.19%), Query Frame = 0

Query:  344 LARLLRYLLDDKKGFAIAAVLLLVAAVADVSGPWLIRIFLDDYLAKDNFPPTVLWGLALA--YIFATVLSAALHYSYGLRFSRIAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSIALISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFGWQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAKPHQYGSDDAPIENGDIEISDLTFSY-DGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKKGRYWQMYQLQQTK 911
            L RLL Y  + KK   +   LLL +++ +V  P LI  F+  Y   +    TV + L +   Y+   +L+A L+Y   + F++I++ ++Q +R  V +S +  P+  FD  P G+ +SR+TNDTE++KE Y  VI S  ++I LI   L+ M++L   +  + +I+ P  + +M  YQ+ S P  R  +  + +I ++ +E I G+ +IQ   QEQ+F +    ++  H    +KI+K++   LRPL++  S + L  L  IFG        +G LYAFI+YL R+ EPLI +  + S+ QQAI+AGER+FE++     QYG D      G+I++ +L FSY +    VL  IN  +    F+A VG TGSGKSTL+ L++G YP   G+I L  R I + T N ++  I++VQQDP +L+ +  EN+TLGRN+S + + + L  + L  +V  LP GL T +G     LS GQKQLL++AR L+  P+ILILDEAT+N+D  TE  +++ LSS++H  TI+ I HRLSTI  ADNI V + G + E G H  L+ KK  Y  MY  Q  K
Sbjct:   11 LKRLLYYGTNVKKYLILGFTLLLFSSIFEVLNPILISCFIKHYFINN----TVNYSLKIITYYLILQILAAILNYHQNIIFNKISLTVIQKLRYDVMSSTLQLPIKMFDQRPIGQFISRITNDTETIKELYDTVIKSLFQNIILILITLITMFILEWRMACIASIIFPIALIIMLLYQYFSKPILRKIKVYIANIYNIFNEIINGIDVIQQFHQEQKFRKSIKKISISHYYFRMKILKLDSFLLRPLLNFCSTLILCGLILIFGIYPIGFFEIGTLYAFITYLNRLNEPLITITSQQSIFQQAIVAGERIFEIIHTPKQQYGDDSLHFREGNIKVKNLYFSYTNNNVYVLKNINIFIPSKQFIAFVGRTGSGKSTLSKLLIGHYPATLGKICLDERNIQTFTHNVLKKNISIVQQDPIILNDTILENITLGRNISTKKVLKILKTIKLIQFVNSLPKGLKTLLGENGNILSIGQKQLLSIARTLISCPKILILDEATSNVDLDTENNIKKILSSVKHLTTIIAITHRLSTIKHADNIFVFNNGEIVESGTHYNLIRKKSYYKNMYYSQAIK 577          

HSP 2 Score: 145.206 bits (365), Expect = 7.309e-35
Identity = 97/325 (29.85%), Postives = 167/325 (51.38%), Query Frame = 0

Query:    1 MAVAKVDAMFDPVIFVTIGTSFFCSIAGGGYMVANGTLTLGELTAFTLYQGLMIWPMLAVAWLFNIIERGAAAWKRIKEVLDETSELQDGDTALPDTPQTLSITLDQFTWRGHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVV-IAHRLSALEAADEIIVLQKGHIEERGKHNALV 324
            M + K+D+     +     T   C +     +   G   +G L AF  Y   +  P++ +    +I ++   A +RI E++  T + Q GD +L      + +    F++  ++V  L++I I + + + +   G  GSGKSTL  L++       GK+     ++  F     ++ +++V Q P + + +I +NI LG+  +T++ ++    +  I + +    +G +TL+GE G  LS GQKQ +SIAR L+   +ILILD+A S VD  TE++I K +    +H TT++ I HRLS ++ AD I V   G I E G H  L+
Sbjct:  240 MKILKLDSFLLRPLLNFCSTLILCGLILIFGIYPIGFFEIGTLYAFITYLNRLNEPLITITSQQSIFQQAIVAGERIFEII-HTPKQQYGDDSLHFREGNIKVKNLYFSYTNNNVYVLKNINIFIPSKQFIAFVGRTGSGKSTLSKLLIGHYPATLGKICLDERNIQTFTHNVLKKNISIVQQDPIILNDTILENITLGRNISTKKVLKILKTIKLI-QFVNSLPKGLKTLLGENGNILSIGQKQLLSIARTLISCPKILILDEATSNVDLDTENNI-KKILSSVKHLTTIIAITHRLSTIKHADNIFVFNNGEIVESGTHYNLI 561          

BLAST of hypothetical protein vs. SwissProt
Match: gi|6016539|sp|P77265.1|MDLA_ECOLI (RecName: Full=Multidrug resistance-like ATP-binding protein MdlA)

HSP 1 Score: 377.481 bits (968), Expect = 5.026e-117
Identity = 180/323 (55.73%), Postives = 238/323 (73.68%), Query Frame = 0

Query:    1 MAVAKVDAMFDPVIFVTIGTSFFCSIAGGGYMVANGTLTLGELTAFTLYQGLMIWPMLAVAWLFNIIERGAAAWKRIKEVLDETSELQDGDTALPDTPQTLSITLDQFTWRGHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNAL 323
            M VA++DA FDP I++ IG +   +I GG +MV  G+LTLG+LT+F +Y GLMIWPMLA+AW+FNI+ERG+AA+ RI+ +L E   + DG   +P+    L + + QFT+   D PAL ++   L+ G+MLGI GP GSGKSTLLSLI R  D  +G + +    L + ++  WR +LAVV+QTPFLFS ++A+NIALG P+AT++EI   ARLA + +DI++  +GY+T VGE+G+ LSGGQKQRISIARALL++AEILILDDALSAVDGRTEH IL NL    Q +T ++ AHRLSAL  A EIIV+Q GHI +RG H+ L
Sbjct:  235 MRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVQGSLTLGQLTSFMMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVNDGSEPVPEGRGELDVNIHQFTYPQTDHPALENVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGCPNATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLVNAEILILDDALSAVDGRTEHQILHNLRQWGQGRTVIISAHRLSALTEASEIIVMQHGHIAQRGNHDVL 557          

HSP 2 Score: 193.741 bits (491), Expect = 5.425e-51
Identity = 155/581 (26.68%), Postives = 286/581 (49.23%), Query Frame = 0

Query:  343 VLARLLRYLLDDKKGFAIAAVLLLVAAVADVSGPWLIRIFLDDYLAKDNFPPTVLWGLALAYIFATVLSAALHYSYGLRFSRIAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSIALISAMLVAMYL-LSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFG--W---QGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAKPH-QYGSDDAPIENGDIEISDLTFSY-DGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLG-RNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKKGRYWQMYQLQQTKAHL 914
            + A+L  Y   + + +  A  LL++ A+  +  P ++ I +D    +      +L  +A   + A V+   L Y + +     + ++   +R+  Y  +  Q    +     G L++R TND + +     + + + + S+ +  A+L+ M   +S  LT+   + +P +  ++          ++ ++   + +N    ES+  + +I+  G E R S  F +  +      +++ +I+  F  P I +  G+A  +L AI G  W   QGS  + +G L +F+ YLG +  P++ L    +++++   A  R+  ++   P    GS+  P   G+++++   F+Y       L  +N ++K G  L + G TGSGKSTL SL+   + V  G+I+     ++ L  ++ RS +A+V Q P + S +   N+ LG  N + + I        + D +  LP G DT +G   V LS GQKQ +++AR L+    ILILD+A + +D  TE ++   L       T+++ AHRLS + +A  I+V+  GH+ ++GNH  L  + G Y  MY+ QQ +A L
Sbjct:    3 LFAQLSWYFRREWRRYLGAVALLVIIAMLQLVPPKVVGIVVDGVTEQHFTTGQILMWIATMVLIAVVVYL-LRYVWRVLLFGASYQLAVELREDYYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIMMSTQISWQLTLFSLLPMPVMAIMIKRNGDALHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARF-DPTIYIAIGMA--NLLAIGGGSWMVVQGS--LTLGQLTSFMMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVNDGSEPVPEGRGELDVNIHQFTYPQTDHPALENVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGCPNATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLVNAEILILDDALSAVDGRTEHQILHNLRQWGQGRTVIISAHRLSALTEASEIIVMQHGHIAQRGNHDVLAQQSGWYRDMYRYQQLEAAL 577          

BLAST of hypothetical protein vs. SwissProt
Match: gi|18266858|sp|P35598.3|EXP8_STRPN (RecName: Full=Putative ABC transporter ATP-binding protein exp8; AltName: Full=Exported protein 8)

HSP 1 Score: 374.785 bits (961), Expect = 5.689e-116
Identity = 214/570 (37.54%), Postives = 331/570 (58.07%), Query Frame = 0

Query:  343 VLARLLRYLLDDKKGFAIAAVLLLVAAVADVSGPWLIRIFLDDYLAKDN-FPPTVLWGLALAYIFATVLSAALHYSYGLRFSRIAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSIALISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFGWQGSEV-IGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAKPHQYGSDD--APIENGDIEISDLTFSYDGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKKGRYWQMYQLQ 908
            VL RL+ YL        +A   LL   V     P +   F+D YL+  N    TVL    L Y    +L   + Y   L F+R++  IV+ IR+  +A++    +S FD  PAG +VSR+TNDTE++ + +  +++SF+ ++ +    L  M +L   LT +V + LP +  ++  Y+ +S      +R LL+DINS ++E+I+G+ +IQ   QE+R    F  +  +HL    + V ++ +FLRP + L+  +    L A FG++G  + I VG +YAFI Y+ R+ +PLIE+ Q  S LQ A+++  R+F L+D + ++   ++  A ++ G+I    + FSYDGK  +L  I+ SV +G  +A VGHTGSGKS++ +++M FY  QSG + L    I   +Q  +R  I +V Q+P +   + + N+ + +  SDE +  A   VD   ++Q LP G D+ +     + S GQ+QLLA AR +  +P+ILILDEATANIDS TE  VQ +L+ +R   T + IAHRLSTI DA+ I VL +G + E G H++LLA  G Y +MY LQ
Sbjct:   10 VLKRLMSYLKPYGLLTFLALSFLLATTVIKSVIPLVASHFIDQYLSNLNQLAVTVL----LVYYGLYILQTVVQYVGNLLFARVSYSIVRDIRRDAFANMEKLGMSYFDKTPAGSIVSRLTNDTETISDMFSGILSSFISAVFIFLTTLYTMLVLDFRLTALVLLFLPLIFLLVNLYRKKSVKIIEKTRSLLSDINSKLAENIEGIRIIQAFNQEKRLQAEFDEINQEHLVYANRSVALDALFLRPAMSLLKLLGYAVLMAYFGYRGFSIGITVGTMYAFIQYINRLFDPLIEVTQNFSTLQTAMVSAGRVFALIDERTYEPLQENGQAKVQEGNIRFEHVCFSYDGKHPILDDISFSVNKGETIAFVGHTGSGKSSIINVLMRFYEFQSGRVLLDDVDIRDFSQEELRKNIGLVLQEPFLYHGTIKSNIAMYQETSDEQVQAAAAFVDADSFIQELPQGYDSPVSERGSSFSTGQRQLLAFARTVASQPKILILDEATANIDSETESLVQASLAKMRQGRTTIAIAHRLSTIQDANCIYVLDKGRIIESGTHEELLALGGTYHKMYSLQ 575          

HSP 2 Score: 151.754 bits (382), Expect = 5.158e-37
Identity = 96/304 (31.58%), Postives = 165/304 (54.28%), Query Frame = 0

Query:   30 GYMVANGTLTLGELTAFTLYQGLMIWPMLAVAWLFNIIERGAAAWKRIKEVLDETS--ELQDGDTALPDTPQTLSITLDQ--FTWRGHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNALVATNAT 329
            GY   +  +T+G + AF  Y   +  P++ V   F+ ++    +  R+  ++DE +   LQ+   A     Q  +I  +   F++ G   P L DI+  +  G+ +   G  GSGKS+++++++RF +   G+V      + +F   E R+ + +V Q PFL+  +I  NIA+ + + + E+++AAA     D  I +  +GY++ V E+G + S GQ+Q ++ AR +    +ILILD+A + +D  TE  +  +L    Q +TT+ IAHRLS ++ A+ I VL KG I E G H  L+A   T
Sbjct:  269 GYRGFSIGITVGTMYAFIQYINRLFDPLIEVTQNFSTLQTAMVSAGRVFALIDERTYEPLQENGQA---KVQEGNIRFEHVCFSYDGKH-PILDDISFSVNKGETIAFVGHTGSGKSSIINVLMRFYEFQSGRVLLDDVDIRDFSQEELRKNIGLVLQEPFLYHGTIKSNIAMYQ-ETSDEQVQAAAAFVDADSFIQELPQGYDSPVSERGSSFSTGQRQLLAFARTVASQPKILILDEATANIDSETESLVQASLAKMRQGRTTIAIAHRLSTIQDANCIYVLDKGRIIESGTHEELLALGGT 567          

BLAST of hypothetical protein vs. SwissProt
Match: gi|25008734|sp|Q8K985.1|MDLA_BUCAP (RecName: Full=Multidrug resistance-like ATP-binding protein MdlA)

HSP 1 Score: 356.295 bits (913), Expect = 4.281e-109
Identity = 172/325 (52.92%), Postives = 239/325 (73.54%), Query Frame = 0

Query:    1 MAVAKVDAMFDPVIFVTIGTSFFCSIAGGGYMVANGTLTLGELTAFTLYQGLMIWPMLAVAWLFNIIERGAAAWKRIKEVLDETSELQDGDTALPDTPQTLSITLDQFTWRGHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHD-RAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNALV 324
            M VA++DA FDPVI++++  S   +I  GG++V N T+T+G+LT+F +Y GLMIWPMLA+AW+FNI+ERG+AAW RI  ++++   ++DG   + +    L+I +D F +  +  P+L++I + L  GK LGI GP G+GKSTLL LI R     +G++ Y  +SL E KI  WR K+ VV QT FLFS SI++NI+LGKP A+++EI  AA+LA I +DIV   +GY T VGE+G+ LSGGQKQRI+IARALLL+ EILILDDALSAVDG+TE++ILKNL   + +  + +++AHRLSAL  ADEIIV+++G I +RG H  L+
Sbjct:  235 MEVAEIDARFDPVIYLSVAFSNLLAITAGGWLVWNNTITIGKLTSFIMYLGLMIWPMLALAWMFNIVERGSAAWDRIHSIINQNLYIEDGKKTIINMNGKLNINIDMFFYPKNKKPSLKNIYLSLNPGKTLGICGPTGAGKSTLLKLIQRQFKIHKGEILYNSSSLLELKIDYWRSKIGVVNQTSFLFSDSISNNISLGKPKASQKEIEKAAKLADIHKDIVCLPQGYNTQVGERGVMLSGGQKQRIAIARALLLNTEILILDDALSAVDGKTENNILKNLKKWKDKGYSLIIVAHRLSALIHADEIIVIKEGTIIQRGNHEKLI 559          

HSP 2 Score: 188.734 bits (478), Expect = 2.301e-49
Identity = 136/490 (27.76%), Postives = 251/490 (51.22%), Query Frame = 0

Query:  433 IRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSIAL-ISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIF--GWQ-GSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAKPH-QYGSDDAPIENGDIEIS-DLTFSYDGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGR-NVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHT-MTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKKGRYWQMYQLQQTKAHL 914
            +R K Y+ +  Q    F     G L++R TND + +     + + + + S  + IS ++V +  +S  LTI+  I +P +  ++  Y  +    +R+++   + +N+   E +  + +I+  G E+   ++F ++ +      +++ +I+  F  P+I L   +A  +L AI   GW   +  I +G L +FI YLG +  P++ L    +++++   A +R+  +++   + + G       NG + I+ D+ F    K   L  I  S+  G  L + G TG+GKSTL  L+   + +  GEI     ++  L  +  RS I +V Q   + S S   N++LG+   S + I +A    D+   +  LP G +T +G   V LS GQKQ +A+AR L+    ILILD+A + +D  TE  + + L   +    +++++AHRLS +  AD I+V+  G + ++GNH++L+ +K  Y  MY  Q+ +  +
Sbjct:   92 LRVKFYSYLSKQSEIFFLKNRTGDLIARATNDVDRVVFAAGEGVLTLVDSSVMGISVLIVMITQISWLLTIISLIPMPIMAILIKKYGKKLHDTFRNAQSAFSLLNNQTQEILTSIRMIRAFGLEKNQLKKFNNIVNDTGKKNMEVAEIDARF-DPVIYL--SVAFSNLLAITAGGWLVWNNTITIGKLTSFIMYLGLMIWPMLALAWMFNIVERGSAAWDRIHSIINQNLYIEDGKKTIINMNGKLNINIDMFFYPKNKKPSLKNIYLSLNPGKTLGICGPTGAGKSTLLKLIQRQFKIHKGEILYNSSSLLELKIDYWRSKIGVVNQTSFLFSDSISNNISLGKPKASQKEIEKAAKLADIHKDIVCLPQGYNTQVGERGVMLSGGQKQRIAIARALLLNTEILILDDALSAVDGKTENNILKNLKKWKDKGYSLIIVAHRLSALIHADEIIVIKEGTIIQRGNHEKLIKEKNWYKSMYDHQKIQTEI 578          

BLAST of hypothetical protein vs. SwissProt
Match: gi|11386921|sp|P57551.1|MDLA_BUCAI (RecName: Full=Multidrug resistance-like ATP-binding protein MdlA)

HSP 1 Score: 355.91 bits (912), Expect = 7.656e-109
Identity = 167/325 (51.38%), Postives = 240/325 (73.85%), Query Frame = 0

Query:    1 MAVAKVDAMFDPVIFVTIGTSFFCSIAGGGYMVANGTLTLGELTAFTLYQGLMIWPMLAVAWLFNIIERGAAAWKRIKEVLDETSELQDGDTALPDTPQTLSITLDQFTWRGHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHD-RAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNALV 324
            M VAK+DA FDPVI++++  S   +I GGG++V N  +++G+LT+F +Y GLMIWPMLA+AW+FNI+ERG+AAW RI  ++++   ++DG   +P  P  L+I + +F +  +  P+L+DI I ++ G  LGI GP GSGKSTLL LI R  +  + ++ Y   SL E KI +WRR++AVV QT FLFS +I++NI+LGKP+A+++EI   A+LA + +DI+   E YET VGE+G+ LSGGQKQR+ IARALLL+AEILILDDALSAVD +TE++ILKN+++ + +  + ++  HRLSAL  +DEIIV++ G I +RG H  L+
Sbjct:  235 MEVAKIDARFDPVIYLSVAFSNLLAIIGGGWLVWNNQISIGQLTSFIMYLGLMIWPMLALAWMFNIVERGSAAWDRIHSIINKKLYIEDGKNNIPPYPGILNINIKKFYYPNNQKPSLKDIRILIKPGNTLGICGPTGSGKSTLLMLIQRQFNFKKEEIHYHSLSLLEIKIDDWRRRIAVVNQTSFLFSDTISNNISLGKPNASQKEIEEVAKLADVHKDIIDLPERYETQVGERGVMLSGGQKQRVCIARALLLNAEILILDDALSAVDAQTENNILKNINEWKKKKHSLIITTHRLSALINSDEIIVIKSGSIIQRGNHLKLI 559          

HSP 2 Score: 180.259 bits (456), Expect = 2.121e-46
Identity = 144/547 (26.33%), Postives = 265/547 (48.45%), Query Frame = 0

Query:  383 LDDYLAKDNFPPTVLWGLALAYIFATVLSAALHYSYGLRFSRIAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSIAL-ISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFG-----WQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAKPH-QYGSDDAPIENGDIEISDLTFSY-DGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGR-NVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTM-TIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKKGRYWQMYQLQQTKAHLAELED 919
            L D + K N     +    L      V+   L Y + +     + ++   +R K Y  +  Q    F     G L++R TND + +     + + + + S+ +  S ++V    +S  LTI+  I +P +  ++  Y       +R ++   + +N+   E +  + +I+  G E+  S +F  +T       +++ KI+  F  P+I L   +A  +L AI G     W     I +G L +FI YLG +  P++ L    +++++   A +R+  +++ K + + G ++ P   G + I+   F Y + +   L  I   +K G  L + G TGSGKSTL  L+   +  +  EI     ++  +  +  R  IA+V Q   + S +   N++LG+ N S + I +     D+   +  LP   +T +G   V LS GQKQ + +AR L+    ILILD+A + +D+ TE  + + ++  +    ++++  HRLS + ++D I+V+  G + ++GNH +L+ +K  Y  MY  QQ++    ELED
Sbjct:   42 LIDLIIKKNMHGVQILPWILIIFLVAVIVYILRYLWRILLFGASYQLATELRVKFYTYLSQQSQIFFLKNRTGDLIARATNDVDRVVFAAGEGVLTLVDSLVMGFSVLIVMSTQISFLLTIISLIPMPIMAILIKKYGKELHETFRHAQISFSLLNNQTQEILTSIRMIRAFGLEKNQSNKFNIITRNTGKKNMEVAKIDARF-DPVIYL--SVAFSNLLAIIGGGWLVWNNQ--ISIGQLTSFIMYLGLMIWPMLALAWMFNIVERGSAAWDRIHSIINKKLYIEDGKNNIPPYPGILNINIKKFYYPNNQKPSLKDIRILIKPGNTLGICGPTGSGKSTLLMLIQRQFNFKKEEIHYHSLSLLEIKIDDWRRRIAVVNQTSFLFSDTISNNISLGKPNASQKEIEEVAKLADVHKDIIDLPERYETQVGERGVMLSGGQKQRVCIARALLLNAEILILDDALSAVDAQTENNILKNINEWKKKKHSLIITTHRLSALINSDEIIVIKSGSIIQRGNHLKLIQEKNWYKSMYYYQQSE---IELED 580          

BLAST of hypothetical protein vs. SwissProt
Match: gi|81815000|sp|O07549.1|YHEH_BACSU (RecName: Full=Probable multidrug resistance ABC transporter ATP-binding/permease protein YheH)

HSP 1 Score: 343.584 bits (880), Expect = 2.796e-103
Identity = 182/529 (34.40%), Postives = 322/529 (60.87%), Query Frame = 0

Query:  392 FPPTVLWGLALAYIFATVLSAALHYSYGLRF--SRIAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSIALISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFG---WQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAKPHQYGSDDAPIEN-GDIEISDLTFSYDGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLG-RNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKKGRYWQMYQLQQTKAH 913
            + P +   + L  ++  +L  ++ + YG  +     A +I+Q +R+ V++ I   P+  FD +PAGK+V+R+TNDTE++++ YV V+++F+ S   +  +  A++LL   L  V   ++P +      Y+  +S   +  R + +DIN+ M+ESIQGM++IQ    ++     F  L + H   + +++ +N +    L++++  +A + L   FG      + ++ +GVLYAF+ YL R+ +P+  ++ + S L+ A ++  R+FEL++ K  +   + A     G +E  D++F+Y     VL  I+ + ++G  +ALVGHTGSGKS++ +L+  FY  Q G++ + G++I ++++  +RS + +V QDP++ S +   NV+L    +++E I  AL QV     ++ LP G++  +     TLS+G++QL++ AR L   P ILILDEATA+ID+ TE  +Q+AL  ++   T  VIAHRLSTI +AD ILVL +G + E+GNH++L+A +G+Y+QMY+LQ+ + H
Sbjct:  142 YQPEIKGMVLLICLYGGLLVFSVFFQYGQHYLLQMSANRIIQKMRQDVFSHIQKMPIRYFDNLPAGKVVARITNDTEAIRDLYVTVLSTFVTSGIYMFGIFTALFLLDVKLAFVCLAIVPIIWLWSVIYRRYASYYNQKIRSINSDINAKMNESIQGMTIIQAFRHQKETMREFEELNESHFYFQNRMLNLNSLMSHNLVNVIRNLAFVCLIWHFGGASLNAAGIVSIGVLYAFVDYLNRLFQPITGIVNQFSKLELARVSAGRVFELLEEKNTEEAGEPAKERALGRVEFRDVSFAYQEGEEVLKHISFTAQKGETVALVGHTGSGKSSILNLLFRFYDAQKGDVLIDGKSIYNMSRQELRSHMGIVLQDPYLFSGTIGSNVSLDDERMTEEEIKNALRQVGAEPLLKKLPKGINEPVIEKGSTLSSGERQLISFARALAFDPAILILDEATAHIDTETEAVIQKALDVVKQGRTTFVIAHRLSTIRNADQILVLDKGEIVERGNHEELMALEGQYYQMYELQKGQKH 670          

HSP 2 Score: 171.785 bits (434), Expect = 3.729e-43
Identity = 112/308 (36.36%), Postives = 166/308 (53.90%), Query Frame = 0

Query:   21 SFFCSI--AGGGYMVANGTLTLGELTAFTLYQGLMIWPMLAVAWLFNIIERGAAAWKRIKEVLDETSELQDGDTALPDTPQTLSITLDQFTWR-GHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNALVA 325
            +F C I   GG  + A G +++G L AF  Y   +  P+  +   F+ +E    +  R+ E+L+E +  + G+ A       +      F ++ G +V  L+ I+   + G+ + + G  GSGKS++L+L+ RF D  +G V   G S+      E R  + +V Q P+LFS +I  N++L     T EEI+ A R    +  + +  +G    V EKG TLS G++Q IS ARAL  D  ILILD+A + +D  TE  I K L    Q +TT VIAHRLS +  AD+I+VL KG I ERG H  L+A
Sbjct:  348 AFVCLIWHFGGASLNAAGIVSIGVLYAFVDYLNRLFQPITGIVNQFSKLELARVSAGRVFELLEEKNTEEAGEPAKERALGRVEFRDVSFAYQEGEEV--LKHISFTAQKGETVALVGHTGSGKSSILNLLFRFYDAQKGDVLIDGKSIYNMSRQELRSHMGIVLQDPYLFSGTIGSNVSLDDERMTEEEIKNALRQVGAEPLLKKLPKGINEPVIEKGSTLSSGERQLISFARALAFDPAILILDEATAHIDTETEAVIQKALDVVKQGRTTFVIAHRLSTIRNADQILVLDKGEIVERGNHEELMA 653          

BLAST of hypothetical protein vs. SwissProt
Match: gi|81816277|sp|O53645.1|MDREP_MYCTU (RecName: Full=Multidrug efflux ATP-binding/permease protein Rv0194)

HSP 1 Score: 350.517 bits (898), Expect = 2.701e-101
Identity = 280/948 (29.54%), Postives = 453/948 (47.78%), Query Frame = 0

Query:    1 MAVAKVDAMFDPVIFVTIGTSFFCSIAGGGYMVANGTLTLGELTAFTLYQGLMIWPMLAVAWLFNIIERGAAAWKRIKEVLDETSELQDGDTAL-PDTPQTLSITLDQFTWRGHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKGH--------------------------------IEERGKHNALVATNATRAS----IGGIAMSKRDVLARLLRYLLDDKKG-FAIAAVLLLVAAVADVSGPWLIRIFLDDYLAKDNFPPTVLWGLALAYIFATVLSAALHYSYGLRFSRIAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSIALISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFGWQ--GSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAK-PHQYGSDDAPIENGDIEISDLTFSYDGK-TTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGR-NVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKKGRYWQMY 905
            + VA+++A F P++            A GG+M A G++T+G   AF     L+  P   +A +  I ++  A   R+ E++D    L DG   L P+   +L      F +   D P LR+I++ +RAG+ L + G  GSGKSTL SL  R  D  QG V  GG  + E  +   R  + +V +   LFS +I  NIA G+PDAT E+I  AAR A I+E +    +GY+T VG +G+TLSGGQ+QRI++ARALL    +LI+DD  SAVD   E  I + L +    +T V+   R S L  AD + VL  G                                 + ER      VA   T+A+    +              LR LL + +G  A++ +L+ V   A +  P LIR  +D  + +     + LW  ALA     V+   + +   +       +++  +R  V+A      L AF+     ++V+ VT D E++  F    +   + S+  +  +LVA+  +   L +++   +P +    + ++  S+  YR +R  L  + + + E   G+ + Q    E R  + + + +D +    V+  ++  ++  P + L+  +A  +L  + G +   + VI VG L  ++ Y+  +  P+ EL Q     Q+A +A  R+  L+  + P    +       G++    + +SY  +    L GIN  +  G  +  VG TGSGKSTL  L+  FY    G +++ G  +     +  R+ + +V Q+ +V + + R+ +  GR + +D  + +A  +V     +  L  G    +  G   LSAGQ QLLALAR  +  P IL+LDEAT  +D  TE  VQRA  +L    T +++AH L+    AD I+VL  G V E G H +LLA  G Y +++
Sbjct:  233 LRVARLNAHFGPLLQTLPALGQMAVFALGGWMAAQGSITVGTFVAFWACLTLLARPACDLAGMLTIAQQARAGAVRVLELIDSRPTLVDGTKPLSPEARLSLEFQRVSFGYVA-DRPVLREISLSVRAGETLAVVGAPGSGKSTLASLATRCYDVTQGAVRIGGQDVRELTLDSLRSAIGLVPEDAVLFSGTIGANIAYGRPDATPEQIATAARAAHIEEFVNTLPDGYQTAVGARGLTLSGGQRQRIALARALLHQPRLLIMDDPTSAVDAVIECGIQEVLREAIADRTAVIFTRRRSMLTLADRVAVLDSGRLLDVGTPDEVWERCPRYRELLSPAPDLADDLVVAERSPVCRPVAGLGTKAAQHTNVHNPGPHDHPPGPDPLRRLLREFRGPLALSLLLVAVQTCAGLLPPLLIRHGIDVGIRRHVL--SALWWAALAGTATVVIRWVVQWGSAMVAGYTGEQVLFRLRSVVFAHAQRLGLDAFEDDGDAQIVTAVTADVEAIVAFLRTGLVVAVISVVTLVGILVALLAIRARLVLLIFTTMPVLALATWQFRRASNWTYRRARHRLGTVTATLREYAAGLRIAQAFRAEYRGLQSYFAHSDDYRRLGVRGQRLLALYY-PFVALLCSLAT-TLVLLDGAREVRAGVISVGALVTYLLYIELLYTPIGELAQMFDDYQRAAVAAGRIRSLLSTRTPSSPAARPVGTLRGEVVFDAVHYSYRTREVPALAGINLRIPAGQTVVFVGSTGSGKSTLIKLVARFYDPTHGTVRVDGCDLREFDVDGYRNRLGIVTQEQYVFAGTVRDAIAYGRPDATDAQVERAAREVGAHPMITALDNGYLHQVTAGGRNLSAGQLQLLALARARLVDPDILLLDEATVALDPATEAVVQRATLTLAARRTTLIVAHGLAIAEHADRIVVLEHGTVVEDGAHTELLAAGGHYSRLW 1175          

HSP 2 Score: 196.052 bits (497), Expect = 1.094e-49
Identity = 154/565 (27.26%), Postives = 279/565 (49.38%), Query Frame = 0

Query:  346 RLLRYLLDDKKGFAIAAVLLLVAAVADVSGPWLIRIFLDDYLAKDNFPPTVLWGLALAYIFATVLSAALHYSYGLRFSRIAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSIALISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFGW---QGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAKPHQYGSDD--APIENGDIEISDLTFSYDGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGR-NVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKKGRYWQM 904
            RL  Y++  ++   +     L   V  V  P + +  +DD +A D+ P      + +A   AT L   +   YG    RIA  +   +R   + +++       D   +G+L+ R TND + ++     V  + L+ +  +   +  M  LS  L ++  +L+P +  + +  +   + A   +++    +  V+  ++ G+ +++  GQE+R + +  + +      ++++ ++N  F  PL+  +  +  +++ A+ GW   QGS  I VG   AF + L  +  P  +L   L++ QQA     R+ EL+D++P         +P     +E   ++F Y     VL  I+ SV+ G  LA+VG  GSGKSTLASL    Y V  G +++GG+ +  LT +++RS I +V +D  + S +   N+  GR + + E I  A     + ++V  LP G  TA+G   +TLS GQ+Q +ALAR L+ +PR+LI+D+ T+ +D+  E  +Q  L       T V+   R S +  AD + VL  G + + G   ++  +  RY ++
Sbjct:    8 RLSGYVMRHRRDLLLGFGAALAGTVIAVLVPLVTKRVIDDAIAADHRPLAPWAVVLVAAAGATYLLMYVRRYYG---GRIAHLVQHDLRMDAFQALLRWDGRQQDRWSSGQLIVRTTNDLQLVQALLFDV-PNVLRHVLTLLLGVAVMTWLSVPLALLAVLLVPVIGLIAHRSRRLLAAATHCAQEHKAAVTGVVDAAVCGIRVVKAFGQEERETVKLVTASRALYAAQLRVARLNAHF-GPLLQTLPALGQMAVFALGGWMAAQGS--ITVGTFVAFWACLTLLARPACDLAGMLTIAQQARAGAVRVLELIDSRPTLVDGTKPLSPEARLSLEFQRVSFGYVADRPVLREISLSVRAGETLAVVGAPGSGKSTLASLATRCYDVTQGAVRIGGQDVRELTLDSLRSAIGLVPEDAVLFSGTIGANIAYGRPDATPEQIATAARAAHIEEFVNTLPDGYQTAVGARGLTLSGGQRQRIALARALLHQPRLLIMDDPTSAVDAVIECGIQEVLREAIADRTAVIFTRRRSMLTLADRVAVLDSGRLLDVGTPDEVWERCPRYREL 565          

BLAST of hypothetical protein vs. nr
Match: gi|1211988234|ref|WP_088563625.1| (multidrug ABC transporter permease/ATP-binding protein [Escherichia coli] >gi|1210326768|gb|OWS82039.1| hypothetical protein B7C52_01970 [Escherichia coli])

HSP 1 Score: 937.562 bits (2422), Expect = 0.000e+0
Identity = 482/917 (52.56%), Postives = 642/917 (70.01%), Query Frame = 0

Query:    1 MAVAKVDAMFDPVIFVTIGTSFFCSIAGGGYMVANGTLTLGELTAFTLYQGLMIWPMLAVAWLFNIIERGAAAWKRIKEVLDETSELQDGDTALPDTPQTLSITLDQFTWRGHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNALVATNATRASIGGIAMSKR--DVLARLLRYLLDDKKGFAIAAVLLLVAAVADVSGPWLIRIFLDDYLAKDNFPPTVLWGLALAYIFATVLSAALHYSYGLRFSRIAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSIALISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFGWQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAKPHQYGSDDAPIENGDIEISDLTFSYDGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKKGRYWQMYQLQQTKAHLA 915
            M VA++DA FDP I++ IG +   +I GG +MV  G+LTLG+LT+F +Y GLMIWPMLA+AW+FNI+ERG+AA+ RI+ +L E   + DG   +P+    L + + QFT+   D PAL ++   L+ G+MLGI GP GSGKSTLLSLI R  D  +G + +    L + ++  WR +LAVV+QTPFLFS ++A+NIALG P+AT++EI   ARLA + +DI++  +GY+T VGE+G+ LSGGQKQRISIARALL++AEILILDDALSAVDGRTEH IL NL    Q +T ++ AHRLSAL  A EIIV+Q GHI +RG H+ L   +     +       +    L RLL Y    +K   IA +++ VAA A+VSGP LI  F+D+ +AK+N P  ++ GLA AY+   + +A LHY+  L F+R A+ +VQ +R  V  + + QPLS FD  P G+++SRVTNDTE +++ YV V+A+ L+S AL+ AMLVAM+ L   + +V  ++ P V+ VM  YQ  S+P  R  R  L DIN   +E I GMS+IQ   Q+ RF ER G  +  H    ++ ++++G  LRPL+ L S + L  L  +FG+  S  I VGVLYAFISYLGR+ EPLIEL  + ++LQQA++AGER+FELMD    QYG+DD P+++G IE+ +++F+Y     VL  IN SV    F+ALVGHTGSGKSTLASL+MG+YP+  GEI+L GR +SSL+ +A+R G+AMVQQDP VL+ +F  NVTLGR++S+E +WQAL+ V LA+  + +  G+ T +G     LS GQKQLLALARVLVE P+ILILDEATA+IDSGTE+ +Q AL+++R   T+VVIAHRLSTI DAD ILVLHRG   EQG HQQLLA +GRYWQMYQLQ     LA
Sbjct:  235 MRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVQGSLTLGQLTSFMMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVNDGSEPVPEGRGELDVNIHQFTYPQTDHPALENVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGCPNATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLVNAEILILDDALSAVDGRTEHQILHNLRQWGQGRTVIISAHRLSALTEASEIIVMQHGHIAQRGNHDELAQQSGWYRDMYRYQQFSQLWPTLKRLLAYGSPWRKPLGIAVLMMWVAAAAEVSGPLLISYFIDNMVAKNNLPLKMVAGLAAAYVGLQLFAAGLHYAQSLLFNRAAVGVVQQLRTDVMDAALRQPLSEFDTQPVGQVISRVTNDTEVIRDLYVTVVATVLRSAALVGAMLVAMFSLDWRMALVAIMIFPVVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSSLILCGLLMLFGFSASGTIEVGVLYAFISYLGRLNEPLIELTTQQAMLQQAVVAGERVFELMDGPRQQYGNDDRPLQSGTIEVDNVSFAYRDDNLVLKNINLSVPSRNFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSALRQGVAMVQQDPVVLADTFLANVTLGRDISEERVWQALETVQLAELARSMSDGIYTPLGEQGNNLSVGQKQLLALARVLVETPQILILDEATASIDSGTEQAIQHALAAVREHTTLVVIAHRLSTIVDADTILVLHRGQAVEQGTHQQLLAAQGRYWQMYQLQLAGEELA 1151          

BLAST of hypothetical protein vs. nr
Match: gi|1139469423|gb|ONF79543.1| (hypothetical protein BXA16_12070 [Salmonella enterica subsp. enterica serovar Typhimurium])

HSP 1 Score: 904.82 bits (2337), Expect = 0.000e+0
Identity = 476/915 (52.02%), Postives = 632/915 (69.07%), Query Frame = 0

Query:    1 MAVAKVDAMFDPVIFVTIGTSFFCSIAGGGYMVANGTLTLGELTAFTLYQGLMIWPMLAVAWLFNIIERGAAAWKRIKEVLDETSELQDGDTALPDTPQTLSITLDQFTWRGHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNALVATNATRASIGGIAMSKRDVLARLLRYLLDDKKGFAIAAVLLLVAAVADVSGPWLIRIFLDDYLAKDNFPPTVLWGLALAYIFATVLSAALHYSYGLRFSRIAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSIALISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFGWQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAKPHQYGSDDAPIENGDIEISDLTFSYDGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKKGRYWQMYQLQQTKAHLA 915
            M VA++DA FDP I++ IG +   +I+GG +MV NG+LTLGELT+F +Y GLMIWPMLA+AW+FNI+ERG+AA+ RI+ +L E   ++DG+  +P     L+  + +F +     PAL ++   L+ G+MLGI GP G+GKST+LSLI R  D  QG++ +    L   ++  WR +LAVV+QTPFLFS SIA+NIALG+P+AT+EEI   ARLA + EDI++  +GY+T VGE+G+ LSGGQKQRISIARALLL+AEIL+LDDALSAVDGRTEH IL NL    + +T ++ AHRLSAL  A+EIIV+Q          + L  T                 L RLL Y    +K  ++A ++L +AA A+VSGP LI  F+D+ +A+ + P   + GLA AY+    L+A LHY+  L F+R A+ +VQ++R  V  + + QPLSAFD  P G+L+SRVTNDTE +++ YV V+A+ L+S ALI AMLVAM+ L   + +V  ++ P+V+ VM  YQ  S+P  R  R  L DIN   +E I GMS+IQ   Q+ RF ER G  +  H    ++ ++++G  LRPL+ L S + L  L  +F +  +  I VGVLYAFISYL R+ EPLIEL  + S+LQQA++AGER+FELMD    +YGSDD P+++G I+I  L+F+Y     VL  I  SV    F+ALVGHTGSGKSTLASL+MG+YP+  GEI+L GR I+SL    +R G+AMVQQDP V++ +F  NVTLGR+VS+  +WQAL+ V LAD  + L  GL T +G    TLS GQKQLLALARVLV+ P+ILILDEATA+IDSGTE+ +Q+AL+++R   T+VVIAHRLSTI +AD ILVLHRG   E+G HQQLLA +GRYWQMYQLQ     LA
Sbjct:  235 MRVARIDARFDPTIYIAIGMANLLAISGGSWMVVNGSLTLGELTSFMMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGEEPVPAGRGELTAAIREFCYPQTTHPALENVNFRLKPGQMLGICGPTGAGKSTILSLIQRHFDVTQGEIRFHDMPLTHLQLDSWRSRLAVVSQTPFLFSDSIANNIALGRPEATQEEIEQVARLASVHEDILRLPQGYDTQVGERGVMLSGGQKQRISIARALLLNAEILLLDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTDANEIIVMQ----------HELWPT-----------------LKRLLAYGSPWRKPLSVAVMMLWIAAAAEVSGPLLISYFIDNMVARHHLPLGKVAGLAAAYVGLQFLAAGLHYAQSLLFNRAAVGVVQSLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAILIFPAVLTVMIIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCGLLMLFSFTSAGTIEVGVLYAFISYLSRLNEPLIELTTQQSMLQQAVVAGERVFELMDRPRQRYGSDDRPLQSGAIDIDHLSFAYRDDNLVLQDITLSVPSRSFVALVGHTGSGKSTLASLLMGYYPLTQGEIRLDGREIASLNHRVLRQGVAMVQQDPVVMADTFLANVTLGRDVSEAQVWQALETVQLADLARGLSDGLHTHLGEQGNTLSVGQKQLLALARVLVDAPQILILDEATASIDSGTEQAIQQALAAIRERTTLVVIAHRLSTIVEADTILVLHRGQAVERGTHQQLLAAQGRYWQMYQLQLVGEELA 1122          

BLAST of hypothetical protein vs. nr
Match: gi|1196389612|ref|WP_086073907.1| (multidrug ABC transporter permease/ATP-binding protein [Klebsiella michiganensis])

HSP 1 Score: 875.159 bits (2260), Expect = 0.000e+0
Identity = 476/942 (50.53%), Postives = 632/942 (67.09%), Query Frame = 0

Query:    1 MAVAKVDAMFDPVIFVTIGTSFFCSIAGGGYMVANGTLTLGELTAFTLYQGLMIWPMLAVAWLFNIIERGAAAWKRIKEVLDETSELQDGDTALPDTPQTLSITLDQFTWRGHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNALVATNATRASIGGIAM-------------SKRDV--------------LARLLRYLLDDKKGFAIAAVLLLVAAVADVSGPWLIRIFLDDYLAKDNFPPTVLWGLALAYIFATVLSAALHYSYGLRFSRIAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSIALISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFGWQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAKPHQYGSDDAPIENGDIEISDLTFSYDGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKKGRYWQMYQLQQTKAHLA 915
            M VA++DA FDP I++ IGT+   +I GG +MV  G+LTLG+LT+F +Y GLMIWPMLA+AW+FNI+ERG+AA+ RI+ +L+E   + DG    P+   TLS+ + +F +   +  +L  +   L+ G+MLGI GP GSGKST+L+LI R  D  +G + +    L   ++  WR +LAVV QTPFLFS ++A NIALGKPDAT+E+I   ARLA + EDI++  +GY T VGE+G+ LSGGQKQRISIARALLL+AEILILDDALSAVDGRTEH IL NL    + +T ++ AHRLSAL  A EI+V+Q G         + VA    R S  GI +             S+R +              L RLL Y    +K   IA  ++ VAAVA+VSGP LI  F+D+ +AK++ P  ++ GLA AYI   +L+A LHY   L F+R A+ +VQ +R  V  + + QPLS FD  P G+L+SRVTNDTE +++ YV V+A+ L+S ALI AMLVAM+ L   + +V   + P+V+ VM  YQ  S+P  R  R  L DIN   +E I GM +IQ   Q+ RF ER    +  H    ++ ++++G  LRPL+ L S + L  L  +FG+  S  I VGVLYAFISYLGR+ EPLIEL  + S+LQQA++AGER+FELMD     +G D  P+ +G + I  ++F+Y   + VL  IN  +    F+ALVGHTGSGKSTLASLMMG+YP+  GEI++ GR +SSL+ +A+R GIAMVQQDP VL+ +F  NVTLGR++S+E +W+AL+ V LA   + +  G+ T +G     LS GQKQLLALARVLV+ P++LILDEATANIDSGTE+ +Q+AL+ +R   T+VVIAHRLSTI +AD ILVLHRG   E+G+HQQLLA +GRYWQMYQLQ     LA
Sbjct:  235 MRVARIDARFDPTIYIAIGTANLLAIGGGSWMVIQGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYARIRTMLEEAPVVNDGSEPTPEGRGTLSVAVREFIYPQANKVSLEKVNFTLQPGQMLGICGPTGSGKSTILALIQRHFDVTEGDIRFHDVPLTRLQLDSWRARLAVVNQTPFLFSDTVASNIALGKPDATQEQIEHVARLASVHEDILRLPQGYNTEVGERGVMLSGGQKQRISIARALLLEAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGIFP------SAVAMRRWRRSRAGIGICTVISSWKRRWMISRRKIRRSPVRSFTELWPTLKRLLAYGSPWRKPLMIAVAMMWVAAVAEVSGPLLISYFIDNMVAKNSLPLKLVCGLAAAYIGLQLLAAGLHYCQALLFNRAAVGVVQQLRSDVMDAALRQPLSEFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIAIFPAVLIVMMIYQRYSTPIVRRVRAWLADINDGFNEVINGMGVIQQFRQQARFGERMREASYAHYLARMQTLRLDGFLLRPLLSLFSSLILCGLLMLFGFSSSGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDKPRQAWGEDSEPLRSGAMSIDHVSFAYRDDSLVLQDINLDIPSRSFVALVGHTGSGKSTLASLMMGYYPLTQGEIRIDGRPLSSLSHSALRQGIAMVQQDPVVLADTFYANVTLGRDISEEQVWEALEAVQLAALAREMENGIYTLLGEQGNNLSVGQKQLLALARVLVDTPQVLILDEATANIDSGTEQAIQQALARVREHTTLVVIAHRLSTIVEADTILVLHRGQAVERGSHQQLLAARGRYWQMYQLQLAGEELA 1170          

BLAST of hypothetical protein vs. nr
Match: gi|146801|gb|AAC36870.1| (putative [Escherichia coli] >gi|739997|prf||2004284A mdl gene)

HSP 1 Score: 872.078 bits (2252), Expect = 0.000e+0
Identity = 465/919 (50.60%), Postives = 619/919 (67.36%), Query Frame = 0

Query:    1 MAVAKVDAMFDPVIFVTIGTSFFCSIAGGGYMVANGTLTLGELTAFTLYQGLMIWPMLAVAWLFNIIERGAAAWKRIKEVLDETSELQDGDTALPDTPQTLSITLDQFTWRGHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKG-----------HIEERGKHNALVATNATRASIGGIAMSKRD----------VLARLLRYLLDDKKGFAIAAVLLLVAAVADVSGPWLIRIFLDDYLAKDNFPPTVLWGLALAYIFATVLSAALHYSYGLRFSRIAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSIALISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFGWQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAKPHQYGSDDAPIENGDIEISDLTFSYDGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKK 898
            + VA++DA FDP I++ IG +   +I GG +MV  G+LTLG+LT+F +Y GLMIWPMLA+AW+FNI+ERG+AA+ RI+ +L E   + DG   +P+    L + + QFT+   D PAL ++   L+ G+MLGI GP GSGKSTLLSLI R  D   G + +    L + ++  WR  LAVV+QTPFLFS ++A+NIALG P+AT++EI   ARLA + +DI++  +GY+T VGE+G+ LSGGQKQRISIARALL++AEILILDDALSAVDGRTEH IL NL    Q +T ++ AHRLSAL  A EIIV+Q             H +  G    +   N  R S     +++R            L RLL Y    +K   IA +++ VAA A+VSGP LI  F+D+ +AK+N P  V+ GLA AY+   + +A LHY+  L F+R A+ +VQ +R  V  + + QPLS FD  P G+++SRVTNDTE +++ YV V+A+ L+S AL+ AMLVAM+ L   + +V  ++ P V+ VM  YQ  S+P  R  R  L DIN    + I GMS+IQ   Q+ RF ER G  +  H    ++ ++++G  LRPL+ L S + L  L  +FG+  S  I VGVLYAFISYLGR+ EPLIEL  + ++LQQA++AGER+FELMD    QYG+DD P  +G IE+ +++F+Y     VL  IN SV    F+ALVGHTGSGKSTLASL+MG+YP+  GEI+L GR +SSL+    + G+AMVQQDP VL+ +F  NVTLGR++S+E +WQAL+ V LAD  + +  G+ T +G     LS GQKQLLALARVLVE P+ILILDEATA+IDSGTE+ +Q AL+++R   T+VVIAHRLSTI DA  ILVLHRG   EQG HQQLL  +
Sbjct:  206 LRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVQGSLTLGQLTSFMMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAERPVVNDGSEPVPEGRGELDVNIHQFTYPQTDHPALENVNFALKPGQMLGICGPNGSGKSTLLSLIQRHFDVSPGDIRFHDIPLTKLQLDSWRTGLAVVSQTPFLFSDTVANNIALGCPNATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLVNAEILILDDALSAVDGRTEHQILHNLRQWGQGRTVIISAHRLSALTEASEIIVMQHDISPSVAILMCWHNKAAGIAICIAINNWRRRSTTLRKIARRPSMRSFSQLWPTLKRLLAYGSPWRKPLGIAVLMMWVAAAAEVSGPLLISYFIDNMVAKNNLPLKVVAGLAAAYVGLQLFAAGLHYAQSLLFNRAAVGVVQQLRTDVMDAALRQPLSEFDTQPVGQVISRVTNDTEVIRDLYVTVVATVLRSAALVGAMLVAMFSLDWRMALVAIMIFPVVLVVMVIYQRYSTPIVRRVRAYLADINDGFKQIINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSSLILCGLLMLFGFSASGTIEVGVLYAFISYLGRLNEPLIELTTQQAMLQQAVVAGERVFELMDGPRQQYGNDDRPFTSGTIEVDNVSFAYRDDNLVLNNINLSVPSRNFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHTRGQ-GVAMVQQDPVVLADTFLANVTLGRDISEERVWQALETVQLADVARSMSDGIYTPLGEQGNNLSVGQKQLLALARVLVETPQILILDEATASIDSGTEQAIQHALAAVREHTTLVVIAHRLSTIVDAATILVLHRGQAVEQGTHQQLLRPR 1123          

HSP 2 Score: 129.798 bits (325), Expect = 1.432e-26
Identity = 96/313 (30.67%), Postives = 163/313 (52.08%), Query Frame = 0

Query:   34 ANGTLTLGELTAFTLYQGLMIWPMLAVAWLFNIIERGAAAWKRIKEVLDETSELQDGDTALPDTPQTLSITLDQFTWRGHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNAL-----VATNATRASIGGIAMSKR 341
            A+GT+ +G L AF  Y G +  P++ +     ++++   A +R+ E++D   + Q G+   P T  T+ +    F +R  ++  L +I + + +   + + G  GSGKSTL SL++ +    +G++   G  L         + +A+V Q P + + +   N+ LG+ D + E +  A     + +      +G  T +GE+G  LS GQKQ +++AR L+   +ILILD+A +++D  TE  I   L    +H T VVIAHRLS +  A  I+VL +G   E+G H  L     V  + + A+ G  A S+R
Sbjct:  834 ASGTIEVGVLYAFISYLGRLNEPLIELTTQQAMLQQAVVAGERVFELMDGPRQ-QYGNDDRPFTSGTIEVDNVSFAYRDDNL-VLNNINLSVPSRNFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHTR-GQGVAMVQQDPVVLADTFLANVTLGR-DISEERVWQALETVQLADVARSMSDGIYTPLGEQGNNLSVGQKQLLALARVLVETPQILILDEATASIDSGTEQAIQHALAAVREHTTLVVIAHRLSTIVDAATILVLHRGQAVEQGTHQQLLRPRDVLADVSTATCGRRAGSQR 1142          

BLAST of hypothetical protein vs. nr
Match: gi|1057623088|ref|WP_068905474.1| (multidrug ABC transporter permease/ATP-binding protein [Enterovibrio pacificus] >gi|1055862068|gb|ODA29704.1| multidrug ABC transporter permease/ATP-binding protein [Enterovibrio pacificus])

HSP 1 Score: 816.224 bits (2107), Expect = 0.000e+0
Identity = 392/585 (67.01%), Postives = 482/585 (82.39%), Query Frame = 0

Query:  338 MSKRDVLARLLRYLLDDKKGFAIAAVLLLVAAVADVSGPWLIRIFLDDYLAKDNFPPTVLWGLALAYIFATVLSAALHYSYGLRFSRIAIKIVQTIRKKVYASIINQPLSAFDYVPAGKLVSRVTNDTESLKEFYVQVIASFLKSIALISAMLVAMYLLSPTLTIVVAILLPSVVFVMYYYQHRSSPAYRDSRDLLTDINSVMSESIQGMSLIQLMGQEQRFSERFGSLTDQHLTTEVKIVKINGIFLRPLIDLMSGIALLSLAAIFGWQGSEVIGVGVLYAFISYLGRVTEPLIELMQRLSLLQQAIMAGERLFELMDAKPHQYGSDDAPIENGDIEISDLTFSYDGKTTVLTGINASVKEGGFLALVGHTGSGKSTLASLMMGFYPVQSGEIQLGGRAISSLTQNAMRSGIAMVQQDPHVLSASFRENVTLGRNVSDEAIWQALDQVDLADYVQHLPLGLDTAIGTGDVTLSAGQKQLLALARVLVERPRILILDEATANIDSGTEERVQRALSSLRHTMTIVVIAHRLSTIADADNILVLHRGHVEEQGNHQQLLAKKGRYWQMYQLQQTKAHLAELEDIAN 922
            M+K+++L RLL+Y+L DK+   ++ VLLL+A++ADVSGP LIRIFLDDYL ++NFP  VLWGLA+AYI  TV S  LHY Y +RFSR+A+ IVQTIRK+VY+S++ QPLSAFD+VP GKLVSR+TNDTESLK+ YV V A+F+K++ L++ MLV M+ LSP L  VV +L+P V+ VMY YQ +SSP +R+SRDLL+DIN+VMSESIQGMSLIQLM QE+ F  RF ++T + L  E++I ++NG FLRPLIDLMSG+ L+SL A+FGW G+EVIGVG+LYAFI+YLGRVTEPL+ELM RLSLLQQAI+AGERLFELMD K   YG DD P+  G I+   + FSYDGK  V+ G++  VK+GGFLALVGHTGSGKSTLASLMMGFY V  G I+L GR I SL+ +A+R G+AMVQQDPHVLS + RENV+LGR VSDE IWQAL+Q +L+D+ + LP GLDT +G G++ LSAGQKQLLALARVLV RP+ILILDEATANIDSGTE++VQR LSSLR  MT+VVIAHRLSTIA+AD ILVLHRG V EQGNH+ LL ++GRYWQM++LQQ  A L ELE +A+
Sbjct:    1 MNKKEILIRLLKYMLADKRALVVSCVLLLLASLADVSGPLLIRIFLDDYLTQNNFPELVLWGLAMAYIGVTVASGLLHYGYRIRFSRMAVGIVQTIRKRVYSSVLKQPLSAFDFVPIGKLVSRITNDTESLKDMYVTVFATFIKTVTLLTVMLVVMFTLSPMLAGVVFLLVPVVIGVMYLYQKKSSPVFRESRDLLSDINAVMSESIQGMSLIQLMAQEENFCRRFEAMTAKRLKAEMRIQRMNGFFLRPLIDLMSGVVLMSLVALFGWHGTEVIGVGLLYAFINYLGRVTEPLVELMMRLSLLQQAIIAGERLFELMDIKQQVYGDDDKPMATGAIQFDKVNFSYDGKVQVVKGVDIQVKQGGFLALVGHTGSGKSTLASLMMGFYDVNGGSIRLDGRPIGSLSHSALRQGVAMVQQDPHVLSDTLRENVSLGREVSDEMIWQALEQSELSDFTRELPSGLDTQLGDGEIGLSAGQKQLLALARVLVARPKILILDEATANIDSGTEDKVQRVLSSLRKDMTVVVIAHRLSTIAEADQILVLHRGEVVEQGNHRSLLEQQGRYWQMHELQQASAQLKELEQMAS 585          

HSP 2 Score: 142.895 bits (359), Expect = 1.147e-31
Identity = 101/330 (30.61%), Postives = 179/330 (54.24%), Query Frame = 0

Query:    1 MAVAKVDAMF-DPVIFVTIGTSFFCSIAGGGYMVANGT--LTLGELTAFTLYQGLMIWPMLAVAWLFNIIERGAAAWKRIKEVLDETSELQDGDTALPDTPQ-TLSITLDQ--FTWRGHDVPALRDIAIDLRAGKMLGIAGPVGSGKSTLLSLILRFEDPIQGKVEYGGTSLGEFKIGEWRRKLAVVTQTPFLFSRSIADNIALGKPDATREEIRAAARLACIDEDIVQFREGYETLVGEKGITLSGGQKQRISIARALLLDAEILILDDALSAVDGRTEHHILKNLHDRAQHQTTVVIAHRLSALEAADEIIVLQKGHIEERGKHNALV 324
            M + +++  F  P+I +  G      +A  G+   +GT  + +G L AF  Y G +  P++ +    +++++   A +R+ E++D   ++   D    D P  T +I  D+  F++ G  V  ++ + I ++ G  L + G  GSGKSTL SL++ F D   G +   G  +G       R+ +A+V Q P + S ++ +N++LG+ + + E I  A   + + +   +   G +T +G+  I LS GQKQ +++AR L+   +ILILD+A + +D  TE  + + L    +  T VVIAHRLS +  AD+I+VL +G + E+G H +L+
Sbjct:  238 MRIQRMNGFFLRPLIDLMSGVVLMSLVALFGW---HGTEVIGVGLLYAFINYLGRVTEPLVELMMRLSLLQQAIIAGERLFELMDIKQQVYGDD----DKPMATGAIQFDKVNFSYDGK-VQVVKGVDIQVKQGGFLALVGHTGSGKSTLASLMMGFYDVNGGSIRLDGRPIGSLSHSALRQGVAMVQQDPHVLSDTLRENVSLGR-EVSDEMIWQALEQSELSDFTRELPSGLDTQLGDGEIGLSAGQKQLLALARVLVARPKILILDEATANIDSGTEDKVQRVLSSLRKDMTVVVIAHRLSTIAEADQILVLHRGEVVEQGNHRSLL 558