troponin isoform 1, maker-scaffold114_size351134-snap-gene-2.16 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of troponin isoform 1 vs. L. salmonis genes
Match: EMLSAG00000005879 (supercontig:LSalAtl2s:LSalAtl2s318:522663:523631:-1 gene:EMLSAG00000005879 transcript:EMLSAT00000005879 description:"augustus_masked-LSalAtl2s318-processed-gene-4.3") HSP 1 Score: 204.142 bits (518), Expect = 5.874e-67 Identity = 97/134 (72.39%), Postives = 116/134 (86.57%), Query Frame = 0 Query: 1 LKKCFDGFC-QDGAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFDVDTW 133 LK+CFDGF +DGAI D +G IL+MMGL+VKP++LK+I+EEIDEDGSG LEF EFCQLSA+FL+EEDEE +KKELKEAFRIYDKEGNGYI T L+EIL ELD KLT ++DGIIEE+DEDGSGT+DFD + + Sbjct: 23 LKRCFDGFADEDGAIPADNVGNILSMMGLKVKPASLKDIIEEIDEDGSGLLEFGEFCQLSARFLIEEDEEALKKELKEAFRIYDKEGNGYISTETLREILRELDNKLTSDDIDGIIEEVDEDGSGTLDFDGEYY 156
BLAST of troponin isoform 1 vs. L. salmonis genes
Match: EMLSAG00000007651 (supercontig:LSalAtl2s:LSalAtl2s443:420476:476013:-1 gene:EMLSAG00000007651 transcript:EMLSAT00000007651 description:"maker-LSalAtl2s443-snap-gene-4.40") HSP 1 Score: 182.57 bits (462), Expect = 1.402e-58 Identity = 87/129 (67.44%), Postives = 105/129 (81.40%), Query Frame = 0 Query: 1 LKKCFDGFCQDGAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 L KCF+GFCQ+G + +T+G IL MMGLRVK AL+ I+EE+DEDGSG LEFEEFC L+A+FL+EEDEE M+KELKEAFR YDKEG GY+ LK IL EL+ KLTD +L I+EE+DEDGSGT+DFD Sbjct: 23 LMKCFNGFCQEGVVQAETVGEILQMMGLRVKQQALQAIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRKELKEAFRFYDKEGVGYLTIETLKGILLELEPKLTDEQLMEIVEEVDEDGSGTIDFD 151
BLAST of troponin isoform 1 vs. L. salmonis genes
Match: EMLSAG00000007153 (supercontig:LSalAtl2s:LSalAtl2s403:109735:110241:1 gene:EMLSAG00000007153 transcript:EMLSAT00000007153 description:"augustus_masked-LSalAtl2s403-processed-gene-1.0") HSP 1 Score: 138.272 bits (347), Expect = 3.140e-41 Identity = 86/132 (65.15%), Postives = 100/132 (75.76%), Query Frame = 0 Query: 1 LKKCFDGF-CQDGA-IHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEE-DEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 LK CF+ F +D A + D + IL MG R LKEI+EEIDEDGSG +EFEEFCQL AKFL+EE DEE MK ELKEAFR+YDKE NG+I T L+EI+ ELD +LT +LDGIIEEIDEDGSGT+DFD Sbjct: 29 LKICFNMFDVKDQAFLSADDLDDILRGMGFRPSKEELKEILEEIDEDGSGEIEFEEFCQLCAKFLIEEPDEETMKAELKEAFRVYDKEANGFITTDQLREIISELDQRLTVDDLDGIIEEIDEDGSGTMDFD 160
BLAST of troponin isoform 1 vs. L. salmonis genes
Match: EMLSAG00000003476 (supercontig:LSalAtl2s:LSalAtl2s18:1777138:1777861:-1 gene:EMLSAG00000003476 transcript:EMLSAT00000003476 description:"maker-LSalAtl2s18-augustus-gene-17.20") HSP 1 Score: 133.65 bits (335), Expect = 2.425e-39 Identity = 83/132 (62.88%), Postives = 97/132 (73.48%), Query Frame = 0 Query: 1 LKKCFDGF--CQDGAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEE-DEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 LK CF+ F + + D + IL MG R LKEI+EEIDEDGSG +EF EFCQL AKFLVEE DEE MK ELKEAFR+YDK+G G+I T L+EI+ ELD +LT +LDGIIEEIDEDGSGT+DFD Sbjct: 38 LKLCFNLFDVRKQDFLGADDLDDILRAMGFRPSKEELKEILEEIDEDGSGEIEFGEFCQLCAKFLVEEPDEETMKAELKEAFRVYDKDGAGFITTDQLREIIAELDPRLTGEDLDGIIEEIDEDGSGTMDFD 169
BLAST of troponin isoform 1 vs. L. salmonis genes
Match: EMLSAG00000005578 (supercontig:LSalAtl2s:LSalAtl2s2:1932686:1933237:-1 gene:EMLSAG00000005578 transcript:EMLSAT00000005578 description:"maker-LSalAtl2s2-augustus-gene-19.6") HSP 1 Score: 107.457 bits (267), Expect = 1.227e-29 Identity = 65/131 (49.62%), Postives = 90/131 (68.70%), Query Frame = 0 Query: 1 LKKCFDGFCQDGAIHVDT--IGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 L+K F+ C +DT + T + M+G+ V + + + VEE D E+FC ++++F+ EED E+M++ELKEAFRIYD+EGNGYI T LKEIL E+D LT +L+GII+E+DEDGSGTVDFD Sbjct: 12 LQKAFE-VCGQNEETIDTELLVTSIKMLGVNVTKAGVMDAVEESGLDPEAKFNLEQFCFIASRFINEEDVEEMREELKEAFRIYDREGNGYITTGVLKEILKEIDPSLTAEQLEGIIQEVDEDGSGTVDFD 141
BLAST of troponin isoform 1 vs. L. salmonis genes
Match: EMLSAG00000008774 (supercontig:LSalAtl2s:LSalAtl2s545:134602:142913:1 gene:EMLSAG00000008774 transcript:EMLSAT00000008774 description:"augustus_masked-LSalAtl2s545-processed-gene-1.3") HSP 1 Score: 83.1889 bits (204), Expect = 4.960e-20 Identity = 46/130 (35.38%), Postives = 73/130 (56.15%), Query Frame = 0 Query: 1 LKKCFDGF--CQDGAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDF 128 K FD F QDG I + + G + +++++ E+D DGSG+LEF EFC + K L + D+E+ ELKE FR++ K+ G I LK +L L K+T E+D +I +D++G G +++ Sbjct: 13 FKAAFDMFDKNQDGTISTKELHAAMRRAGQNPTEAEVQDMINEVDVDGSGYLEFPEFCMMMHKKLNDGDQEN---ELKEVFRVFGKDETGCITAEELKFVLTHLPGKVTYKEIDEMIRTVDQNGDGKINY 139
BLAST of troponin isoform 1 vs. L. salmonis genes
Match: EMLSAG00000006985 (supercontig:LSalAtl2s:LSalAtl2s397:377196:491552:1 gene:EMLSAG00000006985 transcript:EMLSAT00000006985 description:"maker-LSalAtl2s397-snap-gene-5.15") HSP 1 Score: 79.7221 bits (195), Expect = 7.500e-19 Identity = 42/116 (36.21%), Postives = 70/116 (60.34%), Query Frame = 0 Query: 11 DGAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTV 126 DG I + T++ +G + L+E++ E+D DG+G +EFEEF + AK V+++E ++KEAFR++D++G+GYI +++ L L+ E+D +I E D DG G V Sbjct: 26 DGTITTKELATVMRSLGQNPTEAELQEMINEVDADGNGSIEFEEFLAMMAK-KVKDNES--SSDIKEAFRVFDRDGDGYISAEEXHQVMSTLGENLSSEEIDEMIREADLDGDGKV 138 HSP 2 Score: 50.8322 bits (120), Expect = 2.715e-8 Identity = 23/56 (41.07%), Postives = 37/56 (66.07%), Query Frame = 0 Query: 74 ELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 E KEAF ++DK+G+G I T L ++ L T+ EL +I E+D DG+G+++F+ Sbjct: 13 EFKEAFLLFDKDGDGTITTKELATVMRSLGQNPTEAELQEMINEVDADGNGSIEFE 68
BLAST of troponin isoform 1 vs. L. salmonis genes
Match: EMLSAG00000007325 (supercontig:LSalAtl2s:LSalAtl2s412:129788:148284:-1 gene:EMLSAG00000007325 transcript:EMLSAT00000007325 description:"maker-LSalAtl2s412-augustus-gene-1.21") HSP 1 Score: 78.1814 bits (191), Expect = 2.456e-18 Identity = 42/131 (32.06%), Postives = 78/131 (59.54%), Query Frame = 0 Query: 1 LKKCFDGFCQDGAIHVDT--IGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 L++ F+ F DG+ + T +G + MG+ L E++ E D DGSG +EF EFC + A + ++E+M ++ AFR+ D++G+G I ++ + ++ + KL+ E++ +I E D+DG G +D++ Sbjct: 14 LREAFNEFDDDGSGTITTQELGYAMRAMGMNPTEQELLELINEFDTDGSGQIEFPEFCNMMAMKTGQANDEEM---VRMAFRVLDRDGSGTITSAEFRHLMTNIGDKLSATEVEMLIGEADKDGDGHLDYE 141
BLAST of troponin isoform 1 vs. L. salmonis genes
Match: EMLSAG00000007204 (supercontig:LSalAtl2s:LSalAtl2s404:411131:411583:1 gene:EMLSAG00000007204 transcript:EMLSAT00000007204 description:"augustus_masked-LSalAtl2s404-processed-gene-4.7") HSP 1 Score: 76.6406 bits (187), Expect = 8.985e-18 Identity = 42/119 (35.29%), Postives = 70/119 (58.82%), Query Frame = 0 Query: 10 QDGAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDF 128 DG I +G IL +G + L+++ +D DGSG ++ EF Q AK L + ED E+ EAF+++DK+GNG I ++ LK ++ + L D E++ +I+E D DG G++++ Sbjct: 26 SDGVITTSQLGKILHYLGQNPTEAELQDLYLSMDTDGSGTIDLPEFIQSMAKRLARNNFED---EITEAFKVFDKDGNGLISSNELKCVMSNIGEILKDDEVEALIKEADVDGDGSINY 141 HSP 2 Score: 46.9802 bits (110), Expect = 4.907e-7 Identity = 24/51 (47.06%), Postives = 32/51 (62.75%), Query Frame = 0 Query: 77 EAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVD 127 EAF +YD + +G I TS L +ILH L T+ EL + +D DGSGT+D Sbjct: 17 EAFNLYDDDSDGVITTSQLGKILHYLGQNPTEAELQDLYLSMDTDGSGTID 67
BLAST of troponin isoform 1 vs. L. salmonis genes
Match: EMLSAG00000002767 (supercontig:LSalAtl2s:LSalAtl2s15:378667:382347:1 gene:EMLSAG00000002767 transcript:EMLSAT00000002767 description:"maker-LSalAtl2s15-augustus-gene-3.6") HSP 1 Score: 75.8702 bits (185), Expect = 2.662e-17 Identity = 46/152 (30.26%), Postives = 79/152 (51.97%), Query Frame = 0 Query: 1 LKKCFDGFCQDG--AIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDG---------------------SGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 K+ F F +DG I +GT++ +G + L++++ E+D DG +G ++F EF + A + E+ E++EAFR++DK+GNG+I + L+ ++ L KLTD E+D +I E D DG G V+++ Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGEXPFPRQSPPMLYHSLSLYLCNGTIDFPEFLTMMAXKMKXTXSEE---EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 160
BLAST of troponin isoform 1 vs. SwissProt
Match: gi|136030|sp|P21797.1|TNNC1_BALNU (RecName: Full=Troponin C, isoform 1) HSP 1 Score: 179.104 bits (453), Expect = 7.092e-56 Identity = 90/131 (68.70%), Postives = 106/131 (80.92%), Query Frame = 0 Query: 1 LKKCFDGFCQD--GAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 L++ FD F +D G I +T+ IL MMG++V ++ K+I+EEIDEDGSG +EF EF QL+AKFL+EEDEE M KELKEAFR+YDKEGNGYI T LKEILHELDA+LT EL GIIEEIDEDGSGTVDFD Sbjct: 20 LRRAFDSFDRDKKGYISPETVSDILRMMGIKVSSTSFKQIIEEIDEDGSGQIEFSEFLQLAAKFLIEEDEEAMMKELKEAFRLYDKEGNGYITTQTLKEILHELDARLTAEELVGIIEEIDEDGSGTVDFD 150
BLAST of troponin isoform 1 vs. SwissProt
Match: gi|136031|sp|P29289.1|TNNC1_HOMAM (RecName: Full=Troponin C, isoform 1) HSP 1 Score: 162.54 bits (410), Expect = 2.400e-49 Identity = 82/131 (62.60%), Postives = 99/131 (75.57%), Query Frame = 0 Query: 1 LKKCFDGFCQD--GAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 L+K F+ F D G I DT+G IL MMG+++ L+E++ E DEDGSG +EFEEF L+AKFL EEDEE +KKELKEAFRIYD+ GNGYI LKEIL ELD KLT+ LD IIEE+DEDGSGT+DF+ Sbjct: 12 LQKAFNSFDTDDKGFITPDTVGVILRMMGVKISDRHLQEVISETDEDGSGEIEFEEFAALAAKFLSEEDEEALKKELKEAFRIYDRGGNGYITVHTLKEILRELDNKLTEDNLDSIIEEVDEDGSGTIDFN 142
BLAST of troponin isoform 1 vs. SwissProt
Match: gi|136033|sp|P21798.2|TNNC2_BALNU (RecName: Full=Troponin C, isoform 2) HSP 1 Score: 162.155 bits (409), Expect = 3.284e-49 Identity = 82/131 (62.60%), Postives = 97/131 (74.05%), Query Frame = 0 Query: 1 LKKCFDGFCQD--GAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 LKK FDGF + GAI+ D + TIL MMG LKE+++E+D DGSG LEFEEF L+AKF++++D E M KELKEAFR+YDK G GYIPTSALK+IL ELD L +LD II EID DGSGTVDFD Sbjct: 13 LKKAFDGFDHEKKGAINCDVVATILRMMGQAYNAQTLKELIDEVDADGSGMLEFEEFVTLAAKFIIDDDAEAMAKELKEAFRLYDKAGKGYIPTSALKDILKELDETLNAEDLDNIIGEIDTDGSGTVDFD 143
BLAST of troponin isoform 1 vs. SwissProt
Match: gi|19860033|sp|P47947.2|TNNC1_DROME (RecName: Full=Troponin C, isoform 1) HSP 1 Score: 157.532 bits (397), Expect = 2.176e-47 Identity = 78/131 (59.54%), Postives = 100/131 (76.34%), Query Frame = 0 Query: 1 LKKCFDGFC--QDGAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 L+ F+ F ++G I+ +GTIL+M+G ++ + L +I+ E+DEDGSG +EFEEF L+A+FLVEED E M ELKEAFR+YDKEGNGYI T L+EIL ELD KLT+ +LD +IEEID DGSGTVDFD Sbjct: 13 LRNAFNAFDPEKNGYINTAMVGTILSMLGHQLDDATLADIIAEVDEDGSGQIEFEEFTTLAARFLVEEDAEAMMAELKEAFRLYDKEGNGYITTGVLREILRELDDKLTNDDLDMMIEEIDSDGSGTVDFD 143
BLAST of troponin isoform 1 vs. SwissProt
Match: gi|68068004|sp|P47948.2|TNNC2_DROME (RecName: Full=Troponin C, isoform 2) HSP 1 Score: 154.836 bits (390), Expect = 2.836e-46 Identity = 80/131 (61.07%), Postives = 101/131 (77.10%), Query Frame = 0 Query: 1 LKKCFDGF--CQDGAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 L+K F+ F + G+I + + IL +MG L E+++E+DED SG LEFEEF QL+AKF+VEED+E M+KEL+EAFR+YDK+GNGYIPTS LKEIL ELD +LT+ ELD +IEEID DGSGTVDFD Sbjct: 16 LQKAFNSFDHQKTGSIPTEMVADILRLMGQPFDRQILDELIDEVDEDKSGRLEFEEFVQLAAKFIVEEDDEAMQKELREAFRLYDKQGNGYIPTSCLKEILKELDDQLTEQELDIMIEEIDSDGSGTVDFD 146
BLAST of troponin isoform 1 vs. SwissProt
Match: gi|14286181|sp|P47949.2|TNNC3_DROME (RecName: Full=Troponin C, isoform 3) HSP 1 Score: 150.599 bits (379), Expect = 1.115e-44 Identity = 78/131 (59.54%), Postives = 100/131 (76.34%), Query Frame = 0 Query: 1 LKKCFDGF--CQDGAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 L+K F+ F + G+I + + IL +MG L+E++EE+DED SG LEF EF QL+AKF+VEED E M+KEL+EAFR+YDK+GNG+IPT+ LKEIL ELD +LT+ ELD +IEEID DGSGTVDFD Sbjct: 16 LQKAFNSFDHQKTGSIPTEMVADILRLMGQPFDKKILEELIEEVDEDKSGRLEFGEFVQLAAKFIVEEDAEAMQKELREAFRLYDKQGNGFIPTTCLKEILKELDDQLTEQELDIMIEEIDSDGSGTVDFD 146
BLAST of troponin isoform 1 vs. SwissProt
Match: gi|136034|sp|P29290.1|TNNCA_HOMAM (RecName: Full=Troponin C, isoform 2A) HSP 1 Score: 149.058 bits (375), Expect = 4.172e-44 Identity = 82/131 (62.60%), Postives = 103/131 (78.63%), Query Frame = 0 Query: 1 LKKCFDGFCQD--GAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 L+K FD F D G I +T+G IL MMG+++ L+E++ E DEDGSG LEFEEF +L+AKFL+EEDEE +K EL+EAFR+YDKEGNGYI T LKEIL ELD +LT+ +LD IIEE+DEDGSGT+DF+ Sbjct: 12 LQKAFDSFDTDSKGFITPETVGVILRMMGVKISEKNLQEVIAETDEDGSGELEFEEFVELAAKFLIEEDEEALKTELREAFRVYDKEGNGYITTDVLKEILRELDNRLTEEDLDSIIEEVDEDGSGTLDFN 142
BLAST of troponin isoform 1 vs. SwissProt
Match: gi|136032|sp|P06708.1|TNNC2_ASTLP (RecName: Full=Troponin C, isotype gamma) HSP 1 Score: 148.288 bits (373), Expect = 6.865e-44 Identity = 83/131 (63.36%), Postives = 103/131 (78.63%), Query Frame = 0 Query: 1 LKKCFDGFCQD--GAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 LKK FD F D G I +T+G IL MMG+++ L++++ E DEDGSG LEFEEF +L+AKFL+EEDEE +K ELKEAFRIYDK G+GYI T L+EIL ELD +LT+ +LDGIIEE+DEDGSGT+DFD Sbjct: 12 LKKAFDSFDTDSKGFITPETVGVILRMMGVKISEKNLQQVIAETDEDGSGELEFEEFVELAAKFLIEEDEEALKAELKEAFRIYDKGGDGYITTDVLREILRELDNRLTEDDLDGIIEEVDEDGSGTLDFD 142
BLAST of troponin isoform 1 vs. SwissProt
Match: gi|136050|sp|P15159.1|TNNC_TACTR (RecName: Full=Troponin C) HSP 1 Score: 147.132 bits (370), Expect = 2.221e-43 Identity = 75/131 (57.25%), Postives = 97/131 (74.05%), Query Frame = 0 Query: 1 LKKCFDGFCQD--GAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 L+K FD F +D G IH + + TIL +G + LK+++ EID+DGSG LEFEEF L+A+FLVEED E M++EL+EAFR+YDK+G G+I S L++IL LD KLT+ ELD +I EID DGSGTVDFD Sbjct: 15 LRKAFDMFDRDKKGVIHTNMVSTILRTLGQTFEEKDLKDLIAEIDQDGSGELEFEEFMALAARFLVEEDAEAMQEELREAFRLYDKQGQGFINVSDLRDILRALDDKLTEDELDEMIAEIDTDGSGTVDFD 145
BLAST of troponin isoform 1 vs. SwissProt
Match: gi|136035|sp|P29291.1|TNNCB_HOMAM (RecName: Full=Troponin C, isoform 2B) HSP 1 Score: 146.362 bits (368), Expect = 4.051e-43 Identity = 80/131 (61.07%), Postives = 102/131 (77.86%), Query Frame = 0 Query: 1 LKKCFDGFCQD--GAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 L+K FD F D G I +T+G IL MMG+++ L+E++ E DEDGSG LEFEEF +L+AKFL+EEDEE +K EL+EAFR+YD+ GNGYI T LKEIL ELD +LT+ +LD IIEE+DEDGSGT+DF+ Sbjct: 12 LQKAFDSFDTDSKGFITPETVGVILRMMGVKISEKNLQEVISETDEDGSGELEFEEFVELAAKFLIEEDEEALKAELREAFRVYDRGGNGYITTDVLKEILRELDNRLTEEDLDSIIEEVDEDGSGTLDFN 142
BLAST of troponin isoform 1 vs. nr
Match: gi|225718472|gb|ACO15082.1| (Troponin C, isoform 1 [Caligus clemensi]) HSP 1 Score: 204.527 bits (519), Expect = 2.569e-63 Identity = 98/130 (75.38%), Postives = 114/130 (87.69%), Query Frame = 0 Query: 1 LKKCFDGFC-QDGAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 LK+CFDGF +DGAI D +G IL+MMGL+VKP+ALK+I+EEIDEDGSG LEF EFCQLSA+FL+EEDEE +KKELKEAFRIYDKEGNGYI T L+EIL ELD KLT ++DGIIEE+DEDGSGT+DFD Sbjct: 23 LKRCFDGFSDEDGAIPADNVGNILSMMGLKVKPAALKDIIEEIDEDGSGLLEFGEFCQLSARFLIEEDEEALKKELKEAFRIYDKEGNGYISTETLREILKELDNKLTSDDIDGIIEEVDEDGSGTLDFD 152
BLAST of troponin isoform 1 vs. nr
Match: gi|225709854|gb|ACO10773.1| (Troponin C, isoform 1 [Caligus rogercresseyi] >gi|225710444|gb|ACO11068.1| Troponin C, isoform 1 [Caligus rogercresseyi]) HSP 1 Score: 204.527 bits (519), Expect = 3.025e-63 Identity = 98/130 (75.38%), Postives = 113/130 (86.92%), Query Frame = 0 Query: 1 LKKCFDGFC-QDGAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 LK+CFDGF +DGAI D +G IL+MMGL+VKP+ALK I+EEIDEDGSG LEF EFCQLSA+FL+EEDEE +KKELKEAFRIYDKEGNGYI T L+EIL ELD KLT ++DGIIEE+DEDGSGT+DFD Sbjct: 23 LKRCFDGFSDEDGAIPADNVGNILSMMGLKVKPAALKNIIEEIDEDGSGLLEFGEFCQLSARFLIEEDEEALKKELKEAFRIYDKEGNGYISTETLREILKELDNKLTSDDIDGIIEEVDEDGSGTLDFD 152
BLAST of troponin isoform 1 vs. nr
Match: gi|225713568|gb|ACO12630.1| (Troponin C, isoform 1 [Lepeophtheirus salmonis] >gi|225713648|gb|ACO12670.1| Troponin C, isoform 1 [Lepeophtheirus salmonis] >gi|290462903|gb|ADD24499.1| Troponin C, isoform 1 [Lepeophtheirus salmonis] >gi|290561539|gb|ADD38170.1| Troponin C, isoform 1 [Lepeophtheirus salmonis]) HSP 1 Score: 203.756 bits (517), Expect = 5.333e-63 Identity = 97/130 (74.62%), Postives = 114/130 (87.69%), Query Frame = 0 Query: 1 LKKCFDGFC-QDGAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 LK+CFDGF +DGAI D +G IL+MMGL+VKP++LK+I+EEIDEDGSG LEF EFCQLSA+FL+EEDEE +KKELKEAFRIYDKEGNGYI T L+EIL ELD KLT ++DGIIEE+DEDGSGT+DFD Sbjct: 23 LKRCFDGFADEDGAIPADNVGNILSMMGLKVKPASLKDIIEEIDEDGSGLLEFGEFCQLSARFLIEEDEEALKKELKEAFRIYDKEGNGYISTETLREILRELDNKLTSDDIDGIIEEVDEDGSGTLDFD 152
BLAST of troponin isoform 1 vs. nr
Match: gi|1325306181|ref|XP_023334699.1| (troponin C-like [Eurytemora affinis]) HSP 1 Score: 193.741 bits (491), Expect = 6.581e-59 Identity = 95/130 (73.08%), Postives = 111/130 (85.38%), Query Frame = 0 Query: 1 LKKCFDGFCQD-GAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 LK+CFDGF D GAI VD +G IL +MG++VKPSALKEI+EEIDEDGSG LEF EFCQL+A+FLVEEDEE ++KELKEAFRIYDKE NGYI LKEIL ELD+KLT+ +L+ IIEE+D DGSGT+DFD Sbjct: 36 LKRCFDGFADDCGAIPVDHVGNILAIMGMKVKPSALKEIIEEIDEDGSGVLEFGEFCQLAARFLVEEDEEALRKELKEAFRIYDKEKNGYISIQTLKEILRELDSKLTEDDLNSIIEEVDGDGSGTLDFD 165
BLAST of troponin isoform 1 vs. nr
Match: gi|1325328484|ref|XP_023346091.1| (troponin C, isotype gamma-like [Eurytemora affinis]) HSP 1 Score: 190.274 bits (482), Expect = 1.197e-57 Identity = 94/130 (72.31%), Postives = 110/130 (84.62%), Query Frame = 0 Query: 1 LKKCFDGFC-QDGAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 LK+CFDGF ++GAI D +G IL MMG++VKPSAL+EI+E+IDEDGSG LEF EFCQL+AKFLVEEDEE +KKELKEAFRIYDKE GYI T L+EIL ELD KLT+ +L IIEE+DEDGSGT+DFD Sbjct: 25 LKRCFDGFADEEGAIPADNVGGILAMMGMKVKPSALREIIEDIDEDGSGLLEFGEFCQLAAKFLVEEDEEALKKELKEAFRIYDKECMGYISTDTLREILRELDNKLTEDDLSNIIEEVDEDGSGTLDFD 154
BLAST of troponin isoform 1 vs. nr
Match: gi|1325324438|ref|XP_023344064.1| (troponin C-like [Eurytemora affinis]) HSP 1 Score: 184.111 bits (466), Expect = 3.517e-55 Identity = 97/131 (74.05%), Postives = 105/131 (80.15%), Query Frame = 0 Query: 1 LKKCFDGFCQD--GAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 LKK FD F + GAI +T GTIL MMGL+V LK IVE+IDEDGSG LEFEEF LSA+FLVEEDEE +KKELK+AFRIYDKE NGYI T LKEILHELD KLT EL+GIIEEIDEDGSGTVDFD Sbjct: 22 LKKAFDAFDHEKKGAITTETTGTILRMMGLKVSHEGLKAIVEDIDEDGSGQLEFEEFVMLSARFLVEEDEEALKKELKDAFRIYDKERNGYITTGTLKEILHELDPKLTQEELNGIIEEIDEDGSGTVDFD 152
BLAST of troponin isoform 1 vs. nr
Match: gi|225714090|gb|ACO12891.1| (Troponin C, isoform 1 [Lepeophtheirus salmonis]) HSP 1 Score: 182.57 bits (462), Expect = 1.313e-54 Identity = 87/129 (67.44%), Postives = 105/129 (81.40%), Query Frame = 0 Query: 1 LKKCFDGFCQDGAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 L KCF+GFCQ+G + +T+G IL MMGLRVK AL+ I+EE+DEDGSG LEFEEFC L+A+FL+EEDEE M+KELKEAFR YDKEG GY+ LK IL EL+ KLTD +L I+EE+DEDGSGT+DFD Sbjct: 23 LMKCFNGFCQEGVVQAETVGEILQMMGLRVKQQALQAIIEEVDEDGSGELEFEEFCILAARFLIEEDEEQMRKELKEAFRFYDKEGVGYLTIETLKGILLELEPKLTDEQLMEIVEEVDEDGSGTIDFD 151
BLAST of troponin isoform 1 vs. nr
Match: gi|356713486|gb|AET36897.1| (troponin C2 [Litopenaeus vannamei]) HSP 1 Score: 179.489 bits (454), Expect = 1.976e-53 Identity = 89/131 (67.94%), Postives = 107/131 (81.68%), Query Frame = 0 Query: 1 LKKCFDGFCQD--GAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 L+K FD F D GAI+V+TI TIL MMG++V L+EI+ E+DEDGSG LEFEEFC L+AKFL+EEDEE +K ELKEAFRIYDK+G+GYI T LKEIL ELD KL + +LDGII+E+DEDGSGT+DFD Sbjct: 17 LRKAFDAFDTDKKGAINVETISTILRMMGVKVSEKNLQEIIAEVDEDGSGELEFEEFCALAAKFLIEEDEESLKAELKEAFRIYDKQGDGYITTKVLKEILRELDNKLXEEDLDGIIDEVDEDGSGTLDFD 147
BLAST of troponin isoform 1 vs. nr
Match: gi|136030|sp|P21797.1|TNNC1_BALNU (RecName: Full=Troponin C, isoform 1) HSP 1 Score: 179.104 bits (453), Expect = 2.198e-53 Identity = 90/131 (68.70%), Postives = 106/131 (80.92%), Query Frame = 0 Query: 1 LKKCFDGFCQD--GAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 L++ FD F +D G I +T+ IL MMG++V ++ K+I+EEIDEDGSG +EF EF QL+AKFL+EEDEE M KELKEAFR+YDKEGNGYI T LKEILHELDA+LT EL GIIEEIDEDGSGTVDFD Sbjct: 20 LRRAFDSFDRDKKGYISPETVSDILRMMGIKVSSTSFKQIIEEIDEDGSGQIEFSEFLQLAAKFLIEEDEEAMMKELKEAFRLYDKEGNGYITTQTLKEILHELDARLTAEELVGIIEEIDEDGSGTVDFD 150
BLAST of troponin isoform 1 vs. nr
Match: gi|239949539|gb|ACS36544.1| (troponin C isoform 4' [Homarus americanus]) HSP 1 Score: 176.407 bits (446), Expect = 3.164e-52 Identity = 86/131 (65.65%), Postives = 105/131 (80.15%), Query Frame = 0 Query: 1 LKKCFDGFCQD--GAIHVDTIGTILTMMGLRVKPSALKEIVEEIDEDGSGFLEFEEFCQLSAKFLVEEDEEDMKKELKEAFRIYDKEGNGYIPTSALKEILHELDAKLTDPELDGIIEEIDEDGSGTVDFD 129 L+K FD F D GAI DT+ TIL MMG+++ L+E++ E+DED SG LEFEEFC L+AKFL+EEDEE +K ELKEAFRIYDK+G+GYI T LKEIL ELD KLT+ +LDGII+E+DEDGSGT+DFD Sbjct: 17 LRKAFDAFDTDKKGAISTDTVSTILRMMGVKISEKNLQEVISEVDEDDSGELEFEEFCALAAKFLIEEDEESLKTELKEAFRIYDKQGDGYITTQTLKEILRELDNKLTEEDLDGIIDEVDEDGSGTLDFD 147 The following BLAST results are available for this feature:
BLAST of troponin isoform 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 22
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BLAST of troponin isoform 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of troponin isoform 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold114_size351134:341128..343711+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold114_size351134-snap-gene-2.16 ID=maker-scaffold114_size351134-snap-gene-2.16|Name=troponin isoform 1|organism=Tigriopus kingsejongensis|type=gene|length=2584bp|location=Sequence derived from alignment at scaffold114_size351134:341128..343711+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'troponin isoform 1' has the following synonyms
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