60s ribosomal protein l36, maker-scaffold115_size343722-snap-gene-2.19 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 60s ribosomal protein l36 vs. L. salmonis genes
Match: EMLSAG00000010442 (supercontig:LSalAtl2s:LSalAtl2s691:220596:222245:1 gene:EMLSAG00000010442 transcript:EMLSAT00000010442 description:"augustus_masked-LSalAtl2s691-processed-gene-1.5") HSP 1 Score: 168.703 bits (426), Expect = 1.937e-56 Identity = 77/102 (75.49%), Postives = 92/102 (90.20%), Query Frame = 0 Query: 4 MAPRYEICVGLDKGHKTTPNTLKKRPANSKGKLSNHTKFVRDLVREVAGFAPYERRAMELLRISKDKRCLKFLKKRIGNHIRAKRKREEMSNVLQAMRKHAK 105 MAPRYE+C+GLDKGHKTT N LKK+P++ KG ++ ++F+RD+VREVAGF+PYERRAMELLRISKDKRCLKFLKKRIG+H+RA+RKREEMS VL AMRK K Sbjct: 1 MAPRYEMCIGLDKGHKTTKNELKKKPSSRKGMVTTRSRFIRDIVREVAGFSPYERRAMELLRISKDKRCLKFLKKRIGSHVRARRKREEMSAVLXAMRKQTK 102
BLAST of 60s ribosomal protein l36 vs. L. salmonis genes
Match: EMLSAG00000009091 (supercontig:LSalAtl2s:LSalAtl2s571:176769:177600:1 gene:EMLSAG00000009091 transcript:EMLSAT00000009091 description:"snap-LSalAtl2s571-processed-gene-1.38") HSP 1 Score: 79.7221 bits (195), Expect = 1.839e-21 Identity = 36/61 (59.02%), Postives = 49/61 (80.33%), Query Frame = 0 Query: 8 YEICVGLDKGHKTTPNTLKKRPANSKGKLSNHTKFVRDLVREVAGFAPYERRAM-ELLRIS 67 YEIC+GLDKGHKTT + LKK P++ KG ++ ++F+RD+VREVAGF+PYE+ + E RIS Sbjct: 14 YEICIGLDKGHKTTKDELKKNPSSPKGIVTTCSRFIRDIVREVAGFSPYEQWSCSESHRIS 74
BLAST of 60s ribosomal protein l36 vs. L. salmonis genes
Match: EMLSAG00000005399 (supercontig:LSalAtl2s:LSalAtl2s290:312499:314173:1 gene:EMLSAG00000005399 transcript:EMLSAT00000005399 description:"snap_masked-LSalAtl2s290-processed-gene-3.10") HSP 1 Score: 56.225 bits (134), Expect = 4.515e-12 Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 0 Query: 23 NTLKKRPANSKGKLSNHTKFVRDLVREVAGFAPYERRAMELLRISKDKRCLKFLKKRIGNH 83 N LK++P+ KG L+ ++F+RD++ ++AGF YERR MEL ISK+ KRIG+H Sbjct: 2 NELKRKPSARKGMLTPCSRFMRDIIGKIAGFFTYERRGMELFIISKN--------KRIGSH 54
BLAST of 60s ribosomal protein l36 vs. SwissProt
Match: gi|75029794|sp|Q4PM12.1|RL36_IXOSC (RecName: Full=60S ribosomal protein L36) HSP 1 Score: 141.354 bits (355), Expect = 6.115e-44 Identity = 67/101 (66.34%), Postives = 81/101 (80.20%), Query Frame = 0 Query: 4 MAPRYEICVGLDKGHKTTPNTLKKRPANSKGKLSNHTKFVRDLVREVAGFAPYERRAMELLRISKDKRCLKFLKKRIGNHIRAKRKREEMSNVLQAMRKHA 104 M +Y++ VGL KGHK T N K RP+ KG LS HT+FVRDL+REV GFAP+ERRAMELL++SKDKR LKF+KKR+G H+R KRKR+E+SNVL A RK A Sbjct: 1 MGVQYKLAVGLGKGHKVTKNEYKPRPSRRKGALSKHTRFVRDLIREVCGFAPFERRAMELLKVSKDKRALKFIKKRLGTHLRGKRKRDELSNVLVAQRKAA 101
BLAST of 60s ribosomal protein l36 vs. SwissProt
Match: gi|7388073|sp|Q9Y3U8.3|RL36_HUMAN (RecName: Full=60S ribosomal protein L36; AltName: Full=Large ribosomal subunit protein eL36 >gi|75061880|sp|Q5RAZ9.3|RL36_PONAB RecName: Full=60S ribosomal protein L36) HSP 1 Score: 139.043 bits (349), Expect = 4.808e-43 Identity = 66/94 (70.21%), Postives = 79/94 (84.04%), Query Frame = 0 Query: 4 MAPRYEICVGLDKGHKTTPNTLKKRPANSKGKLSNHTKFVRDLVREVAGFAPYERRAMELLRISKDKRCLKFLKKRIGNHIRAKRKREEMSNVL 97 MA RY + VGL+KGHK T N K R + +G+L+ HTKFVRD++REV GFAPYERRAMELL++SKDKR LKF+KKR+G HIRAKRKREE+SNVL Sbjct: 1 MALRYPMAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94
BLAST of 60s ribosomal protein l36 vs. SwissProt
Match: gi|91207744|sp|Q3T171.3|RL36_BOVIN (RecName: Full=60S ribosomal protein L36) HSP 1 Score: 138.272 bits (347), Expect = 7.960e-43 Identity = 66/94 (70.21%), Postives = 79/94 (84.04%), Query Frame = 0 Query: 4 MAPRYEICVGLDKGHKTTPNTLKKRPANSKGKLSNHTKFVRDLVREVAGFAPYERRAMELLRISKDKRCLKFLKKRIGNHIRAKRKREEMSNVL 97 MA RY + VGL+KGHK T N K R + +G+L+ HTKFVRD++REV GFAPYERRAMELL++SKDKR LKF+KKR+G HIRAKRKREE+SNVL Sbjct: 1 MALRYPMAVGLNKGHKVTKNVGKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94
BLAST of 60s ribosomal protein l36 vs. SwissProt
Match: gi|82198490|sp|Q66KU4.1|RL36_XENLA (RecName: Full=60S ribosomal protein L36 >gi|82200179|sp|Q6DER2.1|RL36_XENTR RecName: Full=60S ribosomal protein L36) HSP 1 Score: 137.887 bits (346), Expect = 1.168e-42 Identity = 66/94 (70.21%), Postives = 78/94 (82.98%), Query Frame = 0 Query: 4 MAPRYEICVGLDKGHKTTPNTLKKRPANSKGKLSNHTKFVRDLVREVAGFAPYERRAMELLRISKDKRCLKFLKKRIGNHIRAKRKREEMSNVL 97 MA RY + VGL+KGH+ T N K R +G+L+ HTKFVRD++REV GFAPYERRAMELL++SKDKR LKF+KKRIG HIRAKRKREE+SNVL Sbjct: 1 MAIRYPMAVGLNKGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRIGTHIRAKRKREELSNVL 94
BLAST of 60s ribosomal protein l36 vs. SwissProt
Match: gi|82216089|sp|Q8UW19.1|RL36_HYDHA (RecName: Full=60S ribosomal protein L36) HSP 1 Score: 137.887 bits (346), Expect = 1.234e-42 Identity = 66/94 (70.21%), Postives = 78/94 (82.98%), Query Frame = 0 Query: 4 MAPRYEICVGLDKGHKTTPNTLKKRPANSKGKLSNHTKFVRDLVREVAGFAPYERRAMELLRISKDKRCLKFLKKRIGNHIRAKRKREEMSNVL 97 MA RY + VGL+KGHK T N K R +G+L+ HTKFVRD++REV GFAPYERRAMELL++SKDKR LKF+KKR+G HIRAKRKREE+SNVL Sbjct: 1 MAIRYPMAVGLNKGHKVTKNVSKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94
BLAST of 60s ribosomal protein l36 vs. SwissProt
Match: gi|730560|sp|P39032.2|RL36_RAT (RecName: Full=60S ribosomal protein L36) HSP 1 Score: 136.732 bits (343), Expect = 3.031e-42 Identity = 65/94 (69.15%), Postives = 78/94 (82.98%), Query Frame = 0 Query: 4 MAPRYEICVGLDKGHKTTPNTLKKRPANSKGKLSNHTKFVRDLVREVAGFAPYERRAMELLRISKDKRCLKFLKKRIGNHIRAKRKREEMSNVL 97 MA RY + VGL+KGHK T N K R + +G+L+ HTKFVRD++REV FAPYERRAMELL++SKDKR LKF+KKR+G HIRAKRKREE+SNVL Sbjct: 1 MALRYPMAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCAFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94
BLAST of 60s ribosomal protein l36 vs. SwissProt
Match: gi|1350733|sp|P47964.2|RL36_MOUSE (RecName: Full=60S ribosomal protein L36) HSP 1 Score: 136.732 bits (343), Expect = 3.065e-42 Identity = 65/94 (69.15%), Postives = 78/94 (82.98%), Query Frame = 0 Query: 4 MAPRYEICVGLDKGHKTTPNTLKKRPANSKGKLSNHTKFVRDLVREVAGFAPYERRAMELLRISKDKRCLKFLKKRIGNHIRAKRKREEMSNVL 97 MA RY + VGL+KGHK T N K R + + +L+NHTKFVRD++REV GFAPYERRAMELL++SK KR LKF+KKR+G HIRAKRKREE+SNVL Sbjct: 1 MALRYPMAVGLNKGHKVTKNVSKPRHSRRRSRLTNHTKFVRDMIREVCGFAPYERRAMELLKVSKSKRALKFIKKRVGTHIRAKRKREELSNVL 94
BLAST of 60s ribosomal protein l36 vs. SwissProt
Match: gi|82219651|sp|Q98TF6.1|RL36_CHICK (RecName: Full=60S ribosomal protein L36) HSP 1 Score: 135.961 bits (341), Expect = 6.529e-42 Identity = 65/94 (69.15%), Postives = 78/94 (82.98%), Query Frame = 0 Query: 4 MAPRYEICVGLDKGHKTTPNTLKKRPANSKGKLSNHTKFVRDLVREVAGFAPYERRAMELLRISKDKRCLKFLKKRIGNHIRAKRKREEMSNVL 97 MA RY + VGL+KG+K T N K R +G+L+ HTKFVRD++REV GFAPYERRAMELL++SKDKR LKF+KKR+G HIRAKRKREE+SNVL Sbjct: 1 MAIRYPMAVGLNKGYKVTKNVSKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVL 94
BLAST of 60s ribosomal protein l36 vs. SwissProt
Match: gi|82217274|sp|Q90YT2.1|RL36_ICTPU (RecName: Full=60S ribosomal protein L36) HSP 1 Score: 132.109 bits (331), Expect = 2.483e-40 Identity = 62/94 (65.96%), Postives = 76/94 (80.85%), Query Frame = 0 Query: 4 MAPRYEICVGLDKGHKTTPNTLKKRPANSKGKLSNHTKFVRDLVREVAGFAPYERRAMELLRISKDKRCLKFLKKRIGNHIRAKRKREEMSNVL 97 MA RY + VGL KGH T N K + + G+L+ H+KFVRD++REV GFAPYERRAMELL++SKDKR LKF+KKR+G HIRAKRKREE+SN+L Sbjct: 1 MAIRYPMAVGLKKGHPVTKNVTKPKHSRRGGRLTKHSKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNIL 94
BLAST of 60s ribosomal protein l36 vs. SwissProt
Match: gi|82202809|sp|Q6Q415.1|RL36_DANRE (RecName: Full=60S ribosomal protein L36) HSP 1 Score: 131.724 bits (330), Expect = 2.832e-40 Identity = 62/94 (65.96%), Postives = 75/94 (79.79%), Query Frame = 0 Query: 4 MAPRYEICVGLDKGHKTTPNTLKKRPANSKGKLSNHTKFVRDLVREVAGFAPYERRAMELLRISKDKRCLKFLKKRIGNHIRAKRKREEMSNVL 97 M RY + VGL+KGHK T N K + + +G+L+ H KF RDL+REV GFAPYERRAMELL++SKDKR LKF+KKR+G HIRAKRKREE+SN L Sbjct: 1 MVVRYPMAVGLNKGHKVTKNVSKPKHSRRRGRLTKHAKFARDLIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNTL 94
BLAST of 60s ribosomal protein l36 vs. nr
Match: gi|264667401|gb|ACY71286.1| (ribosomal protein L36 [Chrysomela tremula]) HSP 1 Score: 144.436 bits (363), Expect = 9.935e-43 Identity = 72/106 (67.92%), Postives = 83/106 (78.30%), Query Frame = 0 Query: 4 MAPRYEICVGLDKGHKTTPNTLKK-----RPANSKGKLSNHTKFVRDLVREVAGFAPYERRAMELLRISKDKRCLKFLKKRIGNHIRAKRKREEMSNVLQAMRKHA 104 MAPRYEI VGL KGHKTT + K RPA KG + HTKFVRD++REV G APYE+RAMELL++SKDKR LKFLK+R+G HIRAKRKREE+SN+L MRK A Sbjct: 1 MAPRYEIAVGLHKGHKTTKISEKSKLNKVRPARLKGIQTKHTKFVRDIIREVVGHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQMRKQA 106
BLAST of 60s ribosomal protein l36 vs. nr
Match: gi|321477915|gb|EFX88873.1| (hypothetical protein DAPPUDRAFT_230277 [Daphnia pulex]) HSP 1 Score: 144.436 bits (363), Expect = 1.284e-42 Identity = 68/97 (70.10%), Postives = 81/97 (83.51%), Query Frame = 0 Query: 6 PRYEICVGLDKGHKTTPNTLKKRPANSKGKLSNHTKFVRDLVREVAGFAPYERRAMELLRISKDKRCLKFLKKRIGNHIRAKRKREEMSNVLQAMRK 102 PRY++ VGL KG KTT N K RP+ KGKL+ HTKF+RD+V+EVAG APYE+RAMELL+ISKDKR LKFLK+R+G H+RAKRKREE+ NVL MRK Sbjct: 17 PRYDLAVGLKKGFKTTKNPQKPRPSRRKGKLTKHTKFIRDIVKEVAGHAPYEKRAMELLKISKDKRALKFLKRRLGTHLRAKRKREELGNVLTQMRK 113
BLAST of 60s ribosomal protein l36 vs. nr
Match: gi|1059404473|ref|XP_017775141.1| (PREDICTED: 60S ribosomal protein L36 [Nicrophorus vespilloides]) HSP 1 Score: 144.05 bits (362), Expect = 1.363e-42 Identity = 73/106 (68.87%), Postives = 87/106 (82.08%), Query Frame = 0 Query: 4 MAPRYEICVGLDKGHKTTPNTLKK-RPANSKGKLSNHTKFVRDLVREVAGFAPYERRAMELLRISKDKRCLKFLKKRIGNHIRAKRKREEMSNVLQAMRK---HAK 105 MAPRY++ +GL+KGHKTT K RP+ SKG L+ HTKFVRDL+REV G APYE+RAMELL++SKDKR LKFLK+R+G HIRAKRKREE+SN+L MRK HAK Sbjct: 1 MAPRYDMAIGLNKGHKTTKLIGNKNRPSRSKGVLTKHTKFVRDLIREVCGHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQMRKAQAHAK 106
BLAST of 60s ribosomal protein l36 vs. nr
Match: gi|1022771132|gb|KZS15470.1| (60S ribosomal protein L36 [Daphnia magna]) HSP 1 Score: 144.436 bits (363), Expect = 1.513e-42 Identity = 68/97 (70.10%), Postives = 81/97 (83.51%), Query Frame = 0 Query: 6 PRYEICVGLDKGHKTTPNTLKKRPANSKGKLSNHTKFVRDLVREVAGFAPYERRAMELLRISKDKRCLKFLKKRIGNHIRAKRKREEMSNVLQAMRK 102 PRY++ VGL KG KTT N K RP+ KGKL+ HTKF+RD+V+EVAG APYE+RAMELL+ISKDKR LKFLK+R+G H+RAKRKREE+ NVL MRK Sbjct: 17 PRYDLAVGLKKGFKTTKNPQKPRPSRRKGKLTKHTKFIRDIVKEVAGHAPYEKRAMELLKISKDKRALKFLKRRLGTHLRAKRKREELGNVLTQMRK 113
BLAST of 60s ribosomal protein l36 vs. nr
Match: gi|1284999925|ref|XP_023011671.1| (60S ribosomal protein L36-like [Leptinotarsa decemlineata]) HSP 1 Score: 143.665 bits (361), Expect = 2.035e-42 Identity = 71/105 (67.62%), Postives = 82/105 (78.10%), Query Frame = 0 Query: 4 MAPRYEICVGLDKGHKTT----PNTLKKRPANSKGKLSNHTKFVRDLVREVAGFAPYERRAMELLRISKDKRCLKFLKKRIGNHIRAKRKREEMSNVLQAMRKHA 104 MAPRYEI VGL +GHKTT K RPA KG + HTKFVRD++REV G APYE+RAMELL++SKDKR LKFLK+R+G HIRAKRKREE+SN+L MRK A Sbjct: 1 MAPRYEIAVGLQRGHKTTKLDKSKINKVRPARLKGIQTKHTKFVRDIIREVVGHAPYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQMRKQA 105 The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l36 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of 60s ribosomal protein l36 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of 60s ribosomal protein l36 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold115_size343722:325438..326341+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold115_size343722-snap-gene-2.19 ID=maker-scaffold115_size343722-snap-gene-2.19|Name=60s ribosomal protein l36|organism=Tigriopus kingsejongensis|type=gene|length=904bp|location=Sequence derived from alignment at scaffold115_size343722:325438..326341+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '60s ribosomal protein l36' has the following synonyms
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