abc transporter, maker-scaffold1183_size56743-snap-gene-0.1 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000007660 (supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 gene:EMLSAG00000007660 transcript:EMLSAT00000007660 description:"maker-LSalAtl2s445-augustus-gene-0.18") HSP 1 Score: 98.9821 bits (245), Expect = 1.367e-23 Identity = 48/103 (46.60%), Postives = 72/103 (69.90%), Query Frame = 0 Query: 162 IAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQQ 264 I Y+ Q+P++F ++ ENIR G P A++ EV A+ A + + + DG + +G++G +SGG++QR+AIARAL+K PILILDEATSALD +E +I Q+ Sbjct: 513 IGYINQEPVLFATSVIENIRYGRPNATDNEVYEAAKAAHVDDFVRTFPDGYSTILGERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESE-RIVQE 614 HSP 2 Score: 64.6994 bits (156), Expect = 5.160e-12 Identity = 43/141 (30.50%), Postives = 71/141 (50.35%), Query Frame = 0 Query: 15 RHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVD-----------INLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKN 144 R AI Y+ Q+ + T+V +N++ PNA D+E ++A A VD L +SGGQ+QR+A+A L I +LDE TSALD ++ + + L + ++ +T +++ H + AD I + K Sbjct: 509 RGSAIGYINQEPVLFATSVIENIRYGRPNATDNEVYEAAKAAHVDDFVRTFPDGYSTILGERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESERIVQEALDKLSK--GRTSLVIAHRLSTIKNADVIAVIDKG 647
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003104 (supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-1 gene:EMLSAG00000003104 transcript:EMLSAT00000003104 description:"maker-LSalAtl2s174-augustus-gene-3.18") HSP 1 Score: 91.2781 bits (225), Expect = 5.827e-21 Identity = 49/118 (41.53%), Postives = 73/118 (61.86%), Query Frame = 0 Query: 153 IPYDILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQQTQALGS 270 + D L + I+ V QD ++F T+ NI+ GN S+ +V A+ A++ I G VG++G +LSGGE+QRVAIARA +K +PI+I DEATS+LD +TE I + + + S Sbjct: 431 VTLDSLRRQISIVPQDCVLFNDTIFHNIKYGNLNCSDEDVYKVAKLAEIDNAIRSWPQGYLTQVGERGLKLSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTS 548 HSP 2 Score: 66.6254 bits (161), Expect = 1.165e-12 Identity = 47/151 (31.13%), Postives = 68/151 (45.03%), Query Frame = 0 Query: 2 LGSYELSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVD-----------INLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTL 141 +G+Y ++ +T S I VPQD + T+ N++ N D + + LAE+D + LSGG++QRVA+A L + I + DE TS+LD T IMK L KT I++ H AD I L Sbjct: 423 IGNYNINEVTLDSLRRQISIVPQDCVLFNDTIFHNIKYGNLNCSDEDVYKVAKLAEIDNAIRSWPQGYLTQVGERGLKLSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTS--GKTAIIIAHRLSTVVHADEIFVL 571
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000010048 (supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1 gene:EMLSAG00000010048 transcript:EMLSAT00000010048 description:"snap_masked-LSalAtl2s662-processed-gene-1.13") HSP 1 Score: 77.411 bits (189), Expect = 2.817e-16 Identity = 43/102 (42.16%), Postives = 63/102 (61.76%), Query Frame = 0 Query: 158 LIQHIAYVAQDPIIFTGTLAENIRLG-NPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTE 258 L HI V Q+P++F ++ ENI +G E S ++ + A + I + VG+KG+ LSGG++QR+AIARALI+ IL+LDEA+SALD +E Sbjct: 319 LRSHIGIVGQEPVLFEYSIKENITMGLQGEISEKMIDDTCKAANAYDFIQRLPKKYDTIVGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSE 420 HSP 2 Score: 53.5286 bits (127), Expect = 2.071e-8 Identity = 29/77 (37.66%), Postives = 46/77 (59.74%), Query Frame = 0 Query: 66 ASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQ 142 +LLSGGQ+QR+A+A + SI LLDE +SALD ++ + L + ++ +T I+V H + AD IL ++ Sbjct: 382 GALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDK--ARKGRTTIIVAHRLSTIRSADAILVMK 456
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003611 (supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 gene:EMLSAG00000003611 transcript:EMLSAT00000003611 description:"augustus_masked-LSalAtl2s197-processed-gene-0.4") HSP 1 Score: 73.559 bits (179), Expect = 5.670e-15 Identity = 40/108 (37.04%), Postives = 68/108 (62.96%), Query Frame = 0 Query: 158 LIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFAR--QAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQ 263 L + + + Q+P++F+GTL N+ +PE + ++ +++ L E I DG+N S+ + G LS G+RQ + +ARAL++ ILILDEAT+A+D T++KI + Sbjct: 1232 LRESLTVIPQEPLLFSGTLRSNL---DPENAFSDHDIWNTLGSVHLKEYIRDLKDGLNHSISEGGLNLSSGQRQLMCLARALLRSCKILILDEATAAVDWETDEKIQE 1336 HSP 2 Score: 54.6842 bits (130), Expect = 1.128e-8 Identity = 37/97 (38.14%), Postives = 51/97 (52.58%), Query Frame = 0 Query: 161 HIAYVAQDPIIFTGTLAENIRLGNP---EASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALD 254 IAYV Q+ + +L NI G P E N +E LS L +GD +G++G LSGG+RQR+++ARA+ A + I D SALD Sbjct: 617 QIAYVPQESWMQNTSLKNNILFGKPYDEEWYNQVLEYCCLTYDLSLLP--AGD--ETEIGERGINLSGGQRQRISLARAIYSDADVYIFDNPLSALD 709 HSP 3 Score: 54.6842 bits (130), Expect = 1.223e-8 Identity = 48/177 (27.12%), Postives = 75/177 (42.37%), Query Frame = 0 Query: 19 IRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASLL---------------SGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNL--TEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEENIPYDILIQHIAYVAQDPIIFTGTLAE 178 I YVPQ+ + T+++ N+ P D E+++ + L YD SLL SGGQ+QR++LA + A +++ D P SALD + S+ N+ ++KT ++VTH I Y + HIA + + II GT E Sbjct: 618 IAYVPQESWMQNTSLKNNILFGKPY--DEEWYNQVLEY---CCLTYDLSLLPAGDETEIGERGINLSGGQRQRISLARAIYSDADVYIFDNPLSALDSQVGKSVFNNVLNNNTGIIKDKTRLLVTH------------------------GISYLPHVHHIAVMLKGEIIHEGTYQE 765
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000008248 (supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1 gene:EMLSAG00000008248 transcript:EMLSAT00000008248 description:"maker-LSalAtl2s498-snap-gene-2.25") HSP 1 Score: 68.5514 bits (166), Expect = 3.012e-13 Identity = 44/118 (37.29%), Postives = 70/118 (59.32%), Query Frame = 0 Query: 149 DEENIPY---DILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFA--RQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKI 261 D ENI + L I + QDPI+F+G+L N+ +P + A+ +++ + L + GDG+N SV + G LS G+RQ + +ARA+++K IL+LDEAT+A+D T+ I Sbjct: 1341 DGENIRFLGLGKLRSRITIIPQDPILFSGSLRMNL---DPFEAFADRDIWIALEYSHLKSFVWNLGDGLNFSVLEGGRNLSVGQRQLICLARAILRKTQILVLDEATAAIDLETDDLI 1455 HSP 2 Score: 50.8322 bits (120), Expect = 1.963e-7 Identity = 28/76 (36.84%), Postives = 44/76 (57.89%), Query Frame = 0 Query: 69 LSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNL--TEFAQKENKTIIMVTHDAELAQRADFILTLQ 142 LSGGQ+ RV+LA N I++LD+P SA+D + +N+ ++ +NKT I VTH A + D I+ ++ Sbjct: 742 LSGGQKARVSLARCTXNNGDIYILDDPLSAVDVHVGRHLFENVISSQTGLLKNKTRIFVTHGAIFLPQTDKIIVMK 817
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000002221 (supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 gene:EMLSAG00000002221 transcript:EMLSAT00000002221 description:"maker-LSalAtl2s1420-augustus-gene-0.12") HSP 1 Score: 67.3958 bits (163), Expect = 7.405e-13 Identity = 42/120 (35.00%), Postives = 68/120 (56.67%), Query Frame = 0 Query: 158 LIQHIAYVAQDPIIFTGTLAENIRLGNP--EASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQ--QTQALGSTVI 273 L I + QDP++F+G+L N+ +P E + + + L ID DG+ V + G LS G+RQ + +ARAL+++ +LILDEAT+A+D T+ I + +++ STVI Sbjct: 1393 LRSRITIIPQDPVLFSGSLRRNL---DPLDEYNETNIMEAISHSHLKPFIDSLKDGLEYHVSEGGENLSLGQRQLICLARALLRRTRVLILDEATAAVDLETDNLIQKTIRSEFKDSTVI 1509 HSP 2 Score: 55.4546 bits (132), Expect = 5.883e-9 Identity = 47/171 (27.49%), Postives = 84/171 (49.12%), Query Frame = 0 Query: 92 LDEPTSALDKKTALSIMKNLTEFAQKENKTIIM-VTHDAELAQRADFILTLQK------NAQLQDEENIPYDILIQ-HIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALD 254 +++ T+ D K A+++ K ++ E+K I+ V+ D E+ + T+ +A L + + + I ++ IAY AQ + +L NI L N + L +D+ G +G+KG LSGG++QRV++ARA+ + I +LD+ SA+D Sbjct: 623 VEKKTAYPDDKFAINLEKACLKWESDEDKNILSDVSLDIEVGSLVAVVGTVGSGKSSLLSAILGEMDKVSGLITVRGSIAYGAQQAWVLNTSLKNNI-LFNKSYDGDKYTRIVEACALKSDLDMLPGGDETEIGEKGINLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVD 792 HSP 3 Score: 50.447 bits (119), Expect = 2.721e-7 Identity = 41/137 (29.93%), Postives = 68/137 (49.64%), Query Frame = 0 Query: 18 AIRYVPQDIGVLKTTVRQNLQLTAPNACD--SEFFDALAL-AEVDINLDYDASL-------LSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQK--ENKTIIMVTHDAELAQRADFILTLQ 142 +I Y Q VL T+++ N+ D + +A AL +++D+ D + LSGGQ+QRV+LA + + I+LLD+P SA+D I N+ + ++KT +MVTH D I+ ++ Sbjct: 700 SIAYGAQQAWVLNTSLKNNILFNKSYDGDKYTRIVEACALKSDLDMLPGGDETEIGEKGINLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVDSHVGKHIYDNVISSSSGILKDKTRVMVTHGVTYLPFTDKIIVMK 836
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000001342 (supercontig:LSalAtl2s:LSalAtl2s1226:24200:67450:1 gene:EMLSAG00000001342 transcript:EMLSAT00000001342 description:"snap_masked-LSalAtl2s1226-processed-gene-0.1") HSP 1 Score: 65.855 bits (159), Expect = 1.705e-12 Identity = 50/148 (33.78%), Postives = 74/148 (50.00%), Query Frame = 0 Query: 19 IRYVPQDIGVLKT-TVRQNLQLTAPNACDSEFFDALALAEVD--------------INLDYD-ASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDE 150 I Y+PQ+I + K TVR+ L+ +F L E D I D D LSGGQ++RV+ A+ L+ +++LDEPT +D + SI +LT+ A KTI++ TH E A++A I L +N +L E Sbjct: 106 IGYMPQEIALYKEFTVRETLK----------YFGRLYEMETDQIDQRIDFILKFLQITRDRDMVGKLSGGQKRRVSFAAALLHDPELYILDEPTVGVDPRLRKSIWNHLTDLALNRKKTILITTHYIEEARQATSI-GLMRNGKLLAE 242
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6") HSP 1 Score: 65.4698 bits (158), Expect = 3.151e-12 Identity = 37/108 (34.26%), Postives = 65/108 (60.19%), Query Frame = 0 Query: 158 LIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFA--RQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQ 263 L + + QDP +F+GTL N+ +P ++EL + A L + L DG+++ + + G +S G+RQ + +ARAL++K +LI+DEAT+A+D T++ I + Sbjct: 1824 LRSKLTIIPQDPTLFSGTLRLNL---DPFGLFKDMELIESLKHAYLQDF--LKEDGLDKVIAENGENISLGQRQLICLARALLRKNKVLIMDEATAAVDSETDKLIQK 1926 HSP 2 Score: 50.0618 bits (118), Expect = 3.455e-7 Identity = 44/149 (29.53%), Postives = 66/149 (44.30%), Query Frame = 0 Query: 16 HMAIRYVPQDIGVLKTTVRQNLQL----------TAPNAC----DSEFF---DALALAEVDINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKEN-----KTIIMVTHDAELAQRADFILTLQ 142 H ++ Y PQ+ + +V+ N+ AC D E F D+ + E INL SGGQ+QR++LA +Q+ I+ LD+P + +D A K+L E N KT I+VTH+ D I L+ Sbjct: 1211 HGSVAYTPQNAWMQNVSVKDNILFGRKFNKNWYDEVLKACSLESDMEXFPSGDSTEIGEKGINL-------SGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVA----KHLFEEVIGSNGLLRGKTRILVTHNLSFLHLVDEIYFLK 1348
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000004490 (supercontig:LSalAtl2s:LSalAtl2s2344:77714:79426:-1 gene:EMLSAG00000004490 transcript:EMLSAT00000004490 description:"maker-LSalAtl2s2344-augustus-gene-0.12") HSP 1 Score: 65.0846 bits (157), Expect = 3.157e-12 Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 0 Query: 158 LIQHIAYVAQDPIIFTGTLAENIRLGN-PEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEAT 250 L I V Q+P++F+GT+ ENI G + + E+ A+++ + I D + VG++G LSGG++QRVAIA A++K LILDEAT Sbjct: 383 LRNQIGIVMQEPVLFSGTIKENILYGTEGKIEHEEIVSAAKESNAHDFIMNFPDRYDTLVGERGVLLSGGQKQRVAIAXAILKNPQXLILDEAT 476
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000001655 (supercontig:LSalAtl2s:LSalAtl2s128:1836948:1854487:1 gene:EMLSAG00000001655 transcript:EMLSAT00000001655 description:"augustus_masked-LSalAtl2s128-processed-gene-18.4") HSP 1 Score: 63.5438 bits (153), Expect = 1.254e-11 Identity = 35/106 (33.02%), Postives = 66/106 (62.26%), Query Frame = 0 Query: 160 QHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDL----SGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKI 261 + A + QDP IF+GT+ +N+ +P A +++ EL+ +LS L ++ G++ +G G LS G++Q + +ARA+I A ++ +DEAT+++D+ T++ I Sbjct: 1293 RQFAVIPQDPFIFSGTIRQNL---DPYAQHSDQELW-DSIKLSYLYNIIYSFGSSGLDTLIGDGGKSLSIGQKQLLCLARAIITSAKVVFIDEATASVDKETDRLI 1394 HSP 2 Score: 58.151 bits (139), Expect = 7.805e-10 Identity = 47/164 (28.66%), Postives = 82/164 (50.00%), Query Frame = 0 Query: 7 LSTLTEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEV------------DINLDYDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEENIPYDIL 158 L L + R A+ +PQD + T+RQNL A ++ D E +D++ L+ + D + LS GQ+Q + LA + A + +DE T+++DK+T +++N+ + A + KT+I + H E +D I + N Q+ EE P D++ Sbjct: 1285 LLPLIDFRRQFAV--IPQDPFIFSGTIRQNLDPYAQHS-DQELWDSIKLSYLYNIIYSFGSSGLDTLIGDGGKSLSIGQKQLLCLARAIITSAKVVFIDEATASVDKETD-RLIRNVLKTAFND-KTVITIAHRIETVLNSDRIFVMS-NGQII-EEGKPEDLI 1441
BLAST of abc transporter vs. SwissProt
Match: gi|123292983|sp|Q2J0F4.1|NDVA_RHOP2 (RecName: Full=Beta-(1-->2)glucan export ATP-binding/permease protein NdvA) HSP 1 Score: 112.464 bits (280), Expect = 6.932e-27 Identity = 55/104 (52.88%), Postives = 79/104 (75.96%), Query Frame = 0 Query: 158 LIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKI 261 L ++I V Q+ ++F ++A+N+R+G P+A++AE+ L A +AQ + I+ SG G N + G++G LSGGERQR++IARAL+K PILILDEATSALD VTE K+ Sbjct: 417 LRRNIGVVFQEALLFDRSIADNLRVGKPDATDAELRLAAERAQALDFIERSGLGFNTAAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEAKV 520
BLAST of abc transporter vs. SwissProt
Match: gi|46396522|sp|Q9JXR3.1|MSBA_NEIMB (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 110.538 bits (275), Expect = 4.104e-26 Identity = 64/121 (52.89%), Postives = 80/121 (66.12%), Query Frame = 0 Query: 149 DEENIPYDILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQ-AQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQQTQAL 268 D +I D L A V+QD +F TL EN+R P+A AEV LFA Q A L LID S G++Q +G GS LSGG+RQRVAIARA++K APIL+LDEATSALD +E+ + Q + L Sbjct: 440 DIADIKLDCLRAQFALVSQDVFLFDDTLFENVRYSRPDAGEAEV-LFALQTANLQSLIDSSPLGLHQPIGSNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERL 559 HSP 2 Score: 62.003 bits (149), Expect = 1.168e-9 Identity = 45/131 (34.35%), Postives = 69/131 (52.67%), Query Frame = 0 Query: 22 VPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDY-----------DASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTL 141 V QD+ + T+ +N++ + P+A ++E AL A + +D + S LSGGQ+QRVA+A L A I LLDE TSALD ++ + + L EN+T I+V H + AD I+ + Sbjct: 456 VSQDVFLFDDTLFENVRYSRPDAGEAEVLFALQTANLQSLIDSSPLGLHQPIGSNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERLM--ENRTGIIVAHRLTTIEGADRIIVM 584
BLAST of abc transporter vs. SwissProt
Match: gi|123749266|sp|Q13BH6.1|NDVA_RHOPS (RecName: Full=Beta-(1-->2)glucan export ATP-binding/permease protein NdvA) HSP 1 Score: 109.383 bits (272), Expect = 7.716e-26 Identity = 55/113 (48.67%), Postives = 80/113 (70.80%), Query Frame = 0 Query: 149 DEENIPYDILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKI 261 D + L ++I V Q+ ++F ++AEN+R+G P+A++AE+ L A +AQ + ID + G + + G++G LSGGERQR++IARAL+K PILILDEATSALD VTE K+ Sbjct: 408 DVRGLTMSGLRRNIGVVFQEALLFNRSIAENLRVGKPDATDAELRLAAERAQALDFIDRNDLGFDTNAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEAKV 520
BLAST of abc transporter vs. SwissProt
Match: gi|81311132|sp|Q5F4X8.1|MSBA_NEIG1 (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 108.227 bits (269), Expect = 2.002e-25 Identity = 60/120 (50.00%), Postives = 77/120 (64.17%), Query Frame = 0 Query: 149 DEENIPYDILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQQTQAL 268 D +I D L A V+QD +F TL EN+R P+A AEV + A L LID S G++Q +G GS LSGG+RQRVAIARA++K APIL+LDEATSALD +E+ + Q + L Sbjct: 440 DIADIKLDCLRAQFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDASPLGLHQPIGSNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERL 559 HSP 2 Score: 63.5438 bits (153), Expect = 2.910e-10 Identity = 45/131 (34.35%), Postives = 69/131 (52.67%), Query Frame = 0 Query: 22 VPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLD-----------YDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTL 141 V QD+ + T+ +N++ + P+A ++E AL A + +D + S LSGGQ+QRVA+A L A I LLDE TSALD ++ + + L EN+T I+V H + AD I+ + Sbjct: 456 VSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDASPLGLHQPIGSNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERL--MENRTGIIVAHRLTTVESADRIIVM 584
BLAST of abc transporter vs. SwissProt
Match: gi|46396521|sp|Q9JW59.1|MSBA_NEIMA (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 108.227 bits (269), Expect = 2.330e-25 Identity = 60/120 (50.00%), Postives = 77/120 (64.17%), Query Frame = 0 Query: 149 DEENIPYDILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQQTQAL 268 D +I D L A V+QD +F TL EN+R P+A AEV + A L LID S G++Q +G GS LSGG+RQRVAIARA++K APIL+LDEATSALD +E+ + Q + L Sbjct: 440 DIADIKLDCLRAQFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDASPLGLHQPIGSNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERL 559 HSP 2 Score: 62.7734 bits (151), Expect = 6.021e-10 Identity = 45/131 (34.35%), Postives = 69/131 (52.67%), Query Frame = 0 Query: 22 VPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLD-----------YDASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTL 141 V QD+ + T+ +N++ + P+A ++E AL A + +D + S LSGGQ+QRVA+A L A I LLDE TSALD ++ + + L EN+T I+V H + AD I+ + Sbjct: 456 VSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDASPLGLHQPIGSNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERL--MENRTGIIVAHRLTTIEGADRIIVM 584
BLAST of abc transporter vs. SwissProt
Match: gi|81841936|sp|Q89UT8.1|NDVA_BRADU (RecName: Full=Beta-(1-->2)glucan export ATP-binding/permease protein NdvA) HSP 1 Score: 107.071 bits (266), Expect = 5.804e-25 Identity = 56/113 (49.56%), Postives = 78/113 (69.03%), Query Frame = 0 Query: 149 DEENIPYDILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKI 261 D + L ++I V Q+ ++F ++AEN+R+G P+A+ AE+ A +AQ E I+ SG G + G++G LSGGERQR++IARAL+K PILILDEATSALD VTE K+ Sbjct: 403 DVRGVTLTSLRRNIGVVFQEALLFNRSIAENLRVGKPDATEAEMRKAAERAQALEFIERSG-GFETNAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEVKV 514
BLAST of abc transporter vs. SwissProt
Match: gi|148839579|sp|Q3SP57.2|NDVA_NITWN (RecName: Full=Beta-(1-->2)glucan export ATP-binding/permease protein NdvA) HSP 1 Score: 105.916 bits (263), Expect = 1.564e-24 Identity = 52/104 (50.00%), Postives = 75/104 (72.12%), Query Frame = 0 Query: 158 LIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKI 261 L ++I V Q+P++F ++AEN+R+G P+A++ E+ L A +AQ + I+ + G++G LSGGERQR++IARAL+K PILILDEATSALD VTE K+ Sbjct: 417 LRRNIGVVFQEPLLFNRSIAENLRVGKPDATDEEMRLAAGRAQALDFIERGEKKFDTHAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEAKV 520
BLAST of abc transporter vs. SwissProt
Match: gi|74996978|sp|Q54RU1.1|ABCB6_DICDI (RecName: Full=ABC transporter B family member 6; AltName: Full=ABC transporter ABCB.6) HSP 1 Score: 104.76 bits (260), Expect = 3.906e-24 Identity = 53/102 (51.96%), Postives = 73/102 (71.57%), Query Frame = 0 Query: 162 IAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQ 263 I V Q+ ++F T+A NI GN EA++ ++ +R+AQ+ I+ S DG VG++G RLSGGE+QRV+IARAL+K PILILDEA+S+LD TE+KI Q Sbjct: 502 IGVVPQETVLFNDTVAYNIGFGNREANDDQLIDASRRAQILSFIESSPDGFRTVVGERGLRLSGGEKQRVSIARALLKDPPILILDEASSSLDTFTERKIQQ 603
BLAST of abc transporter vs. SwissProt
Match: gi|82230024|sp|Q56A55.1|ABCB8_DANRE (RecName: Full=ATP-binding cassette sub-family B member 8, mitochondrial; Flags: Precursor) HSP 1 Score: 103.99 bits (258), Expect = 8.174e-24 Identity = 50/100 (50.00%), Postives = 70/100 (70.00%), Query Frame = 0 Query: 162 IAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKI 261 I +++Q+P++F ++ ENIR G P A++AEV A+QA I DG N VG++G LSGG++QR+AIARAL+K ILILDEATSALD +E+ + Sbjct: 549 IGFISQEPVLFGTSVMENIRFGKPSATDAEVVSAAKQANAHNFITGFADGYNTVVGERGVTLSGGQKQRIAIARALVKNPSILILDEATSALDAESERVV 648 HSP 2 Score: 57.3806 bits (137), Expect = 4.322e-8 Identity = 43/153 (28.10%), Postives = 73/153 (47.71%), Query Frame = 0 Query: 1 MLGSYELSTL-TEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINL-----DYDASL------LSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTL 141 ML ++ TL R I ++ Q+ + T+V +N++ P+A D+E A A + Y+ + LSGGQ+QR+A+A + SI +LDE TSALD ++ + + L +T++++ H Q AD I + Sbjct: 530 MLDGLDIRTLDPSWLRGHVIGFISQEPVLFGTSVMENIRFGKPSATDAEVVSAAKQANAHNFITGFADGYNTVVGERGVTLSGGQKQRIAIARALVKNPSILILDEATSALDAESERVVQEALDR--ATTGRTVLIIAHRLSTIQAADLICVM 680
BLAST of abc transporter vs. SwissProt
Match: gi|81859401|sp|Q9ZCM8.1|Y696_RICPR (RecName: Full=Putative export ATP-binding/permease protein RP696) HSP 1 Score: 103.219 bits (256), Expect = 9.749e-24 Identity = 62/165 (37.58%), Postives = 91/165 (55.15%), Query Frame = 0 Query: 111 LTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEENIPYDILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQQTQAL--GSTVI 273 L F ++EN TI++ D + P DI + IAYV Q+ IF+ T+ NI GN +AS+ E+ + + E DGIN +G+KG RLSGG++QR+AIARAL++K IL+LDEA SALD ++EQK+ + + G+ +I Sbjct: 384 LLRFYRQENGTILINNQDISFVK--------------------PTDIR-KFIAYVPQEASIFSDTIKSNIIFGNNKASDYEINEIIKITGIEEFSTKLHDGINTKIGEKGVRLSGGQKQRIAIARALLRKPKILLLDEAMSALDTMSEQKLLNAIKKIMKGNIII 527 HSP 2 Score: 55.8398 bits (133), Expect = 1.303e-7 Identity = 41/161 (25.47%), Postives = 75/161 (46.58%), Query Frame = 0 Query: 11 TEMSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYDASL--------------LSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEENIPYDI 157 T++ + +A YVPQ+ + T++ N+ A D E + + + ++ ++ L LSGGQ+QR+A+A L + I LLDE SALD + ++ + + + II + H + AD+IL + K + + + YD+ Sbjct: 408 TDIRKFIA--YVPQEASIFSDTIKSNIIFGNNKASDYEINEIIKITGIE---EFSTKLHDGINTKIGEKGVRLSGGQKQRIAIARALLRKPKILLLDEAMSALDTMSEQKLLNAIKKIMK--GNIIISIAHRISSIESADYILVIDKGGVVTEGSH--YDL 559
BLAST of abc transporter vs. nr
Match: gi|516432192|ref|WP_017821247.1| (ABC transporter ATP-binding protein [Vibrio alginolyticus] >gi|541133030|gb|AGV18919.1| putative ABC transporter [Vibrio alginolyticus NBRC 15630 = ATCC 17749] >gi|543454634|dbj|GAD71242.1| putative ABC transporter permease/ATP-binding protein [Vibrio alginolyticus NBRC 15630 = ATCC 17749] >gi|916454710|gb|KOC96380.1| ABC transporter [Vibrio alginolyticus] >gi|1042045683|gb|ANP67574.1| ABC transporter [Vibrio alginolyticus] >gi|1332523573|gb|PNP20343.1| ABC transporter ATP-binding protein [Vibrio alginolyticus] >gi|1345481621|gb|AVF68032.1| ABC transporter ATP-binding protein [Vibrio alginolyticus] >gi|1345487000|gb|AVF73409.1| ABC transporter ATP-binding protein [Vibrio alginolyticus]) HSP 1 Score: 194.897 bits (494), Expect = 1.189e-54 Identity = 95/125 (76.00%), Postives = 107/125 (85.60%), Query Frame = 0 Query: 149 DEENIPYDILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQQTQALGSTVI 273 D +NIPYD+L QHIAYVAQ+P+IFTGTLA+NIRLGNP AS+ EVE FAR AQL +LID S GI+Q+VGQ+GS LSGGERQRVAIARALIKKAPILI DEAT+ALDE TE+ IAQ Q L STVI Sbjct: 383 DLKNIPYDVLTQHIAYVAQEPVIFTGTLADNIRLGNPNASDYEVESFARHAQLDKLIDSSPKGIHQTVGQRGSGLSGGERQRVAIARALIKKAPILIFDEATAALDEATEKSIAQHIQTLNSTVI 507 HSP 2 Score: 65.4698 bits (158), Expect = 2.490e-8 Identity = 44/126 (34.92%), Postives = 69/126 (54.76%), Query Frame = 0 Query: 13 MSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYD-----------ASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTH 127 +++H+A YV Q+ + T+ N++L PNA D E A++D +D S LSGG++QRVA+A + +A I + DE T+ALD+ T SI +++ Q N T+I+VTH Sbjct: 392 LTQHIA--YVAQEPVIFTGTLADNIRLGNPNASDYEVESFARHAQLDKLIDSSPKGIHQTVGQRGSGLSGGERQRVAIARALIKKAPILIFDEATAALDEATEKSIAQHI----QTLNSTVIIVTH 511
BLAST of abc transporter vs. nr
Match: gi|1033042520|ref|WP_064354891.1| (ABC transporter ATP-binding protein [Vibrio alginolyticus] >gi|1016248506|gb|KZC44393.1| putative ABC transporter [Vibrio alginolyticus]) HSP 1 Score: 194.897 bits (494), Expect = 1.202e-54 Identity = 95/125 (76.00%), Postives = 107/125 (85.60%), Query Frame = 0 Query: 149 DEENIPYDILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQQTQALGSTVI 273 D +NIPYD+L QHIAYVAQ+P+IFTGTLA+NIRLGNP AS+ EVE FAR AQL +LID S GI+Q+VGQ+GS LSGGERQRVAIARALIKKAPILI DEAT+ALDE TE+ IAQ Q L STVI Sbjct: 383 DLKNIPYDVLTQHIAYVAQEPVIFTGTLADNIRLGNPNASDYEVESFARHAQLDKLIDSSPKGIHQTVGQRGSGLSGGERQRVAIARALIKKAPILIFDEATAALDEATEKSIAQHIQTLNSTVI 507 HSP 2 Score: 65.4698 bits (158), Expect = 2.355e-8 Identity = 44/126 (34.92%), Postives = 69/126 (54.76%), Query Frame = 0 Query: 13 MSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYD-----------ASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTH 127 +++H+A YV Q+ + T+ N++L PNA D E A++D +D S LSGG++QRVA+A + +A I + DE T+ALD+ T SI +++ Q N T+I+VTH Sbjct: 392 LTQHIA--YVAQEPVIFTGTLADNIRLGNPNASDYEVESFARHAQLDKLIDSSPKGIHQTVGQRGSGLSGGERQRVAIARALIKKAPILIFDEATAALDEATEKSIAQHI----QTLNSTVIIVTH 511
BLAST of abc transporter vs. nr
Match: gi|823688401|ref|WP_047101774.1| (ABC transporter [Vibrio alginolyticus] >gi|823490520|gb|KLI73477.1| ABC transporter [Vibrio alginolyticus] >gi|1187471450|gb|OSP14183.1| ABC transporter [Vibrio alginolyticus]) HSP 1 Score: 193.741 bits (491), Expect = 2.660e-54 Identity = 95/125 (76.00%), Postives = 106/125 (84.80%), Query Frame = 0 Query: 149 DEENIPYDILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQQTQALGSTVI 273 D +NIPYD+L QHIAYVAQDP+I+TGTLA+NIRLGNP AS+ EVE FAR AQL ELID S I+Q+VGQ+GS LSGGERQRVAIARALIKKAPILI DEAT+ALDE TE+ IAQ Q L STVI Sbjct: 383 DLKNIPYDVLTQHIAYVAQDPVIYTGTLADNIRLGNPNASDYEVESFARHAQLDELIDSSPKRIHQTVGQRGSGLSGGERQRVAIARALIKKAPILIFDEATAALDEATEKSIAQHIQTLNSTVI 507 HSP 2 Score: 66.6254 bits (161), Expect = 9.737e-9 Identity = 49/151 (32.45%), Postives = 81/151 (53.64%), Query Frame = 0 Query: 13 MSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYD-----------ASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTHDAELAQRADFILTLQKNAQLQDEEN 152 +++H+A YV QD + T+ N++L PNA D E A++D +D S LSGG++QRVA+A + +A I + DE T+ALD+ T SI +++ Q N T+I+VTH + LT++ N +++ ++N Sbjct: 392 LTQHIA--YVAQDPVIYTGTLADNIRLGNPNASDYEVESFARHAQLDELIDSSPKRIHQTVGQRGSGLSGGERQRVAIARALIKKAPILIFDEATAALDEATEKSIAQHI----QTLNSTVIIVTHSDQNIWSPTLELTIE-NGRVKVKKN 535
BLAST of abc transporter vs. nr
Match: gi|491517654|ref|WP_005375285.1| (ABC transporter ATP-binding protein [Vibrio alginolyticus] >gi|91192166|gb|EAS78429.1| putative ABC transporter [Vibrio alginolyticus 12G01] >gi|636736104|dbj|GAK16785.1| LOW QUALITY PROTEIN: lipid A export ATP-binding/permease protein MsbA [Vibrio sp. JCM 19053] >gi|936653820|gb|KPM88434.1| ABC transporter [Vibrio alginolyticus] >gi|936663354|gb|KPM97726.1| ABC transporter [Vibrio alginolyticus] >gi|1004113168|gb|KXZ36534.1| ABC transporter [Vibrio alginolyticus]) HSP 1 Score: 192.586 bits (488), Expect = 8.107e-54 Identity = 94/125 (75.20%), Postives = 107/125 (85.60%), Query Frame = 0 Query: 149 DEENIPYDILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQQTQALGSTVI 273 D ++IPYD+L QHIAYVAQ+P+IFTGTLA+NIRLGNP AS+ EVE FAR AQL +LID S GI+Q+VGQ+GS LSGGERQRVAIARALIKKAPILI DEAT+ALDE TE+ IAQ Q L STVI Sbjct: 383 DLKSIPYDVLTQHIAYVAQEPVIFTGTLADNIRLGNPNASDYEVESFARHAQLDKLIDSSPKGIHQTVGQRGSGLSGGERQRVAIARALIKKAPILIFDEATAALDEATEKSIAQHIQTLNSTVI 507 HSP 2 Score: 65.855 bits (159), Expect = 1.785e-8 Identity = 47/139 (33.81%), Postives = 75/139 (53.96%), Query Frame = 0 Query: 2 LGSYELSTLTE--MSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYD-----------ASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTH 127 LG +L ++ +++H+A YV Q+ + T+ N++L PNA D E A++D +D S LSGG++QRVA+A + +A I + DE T+ALD+ T SI +++ Q N T+I+VTH Sbjct: 379 LGGIDLKSIPYDVLTQHIA--YVAQEPVIFTGTLADNIRLGNPNASDYEVESFARHAQLDKLIDSSPKGIHQTVGQRGSGLSGGERQRVAIARALIKKAPILIFDEATAALDEATEKSIAQHI----QTLNSTVIIVTH 511
BLAST of abc transporter vs. nr
Match: gi|922669677|ref|WP_053350081.1| (ABC transporter ATP-binding protein [Vibrio alginolyticus] >gi|1332531787|gb|PNP28551.1| ABC transporter ATP-binding protein [Vibrio alginolyticus]) HSP 1 Score: 192.586 bits (488), Expect = 8.543e-54 Identity = 94/125 (75.20%), Postives = 107/125 (85.60%), Query Frame = 0 Query: 149 DEENIPYDILIQHIAYVAQDPIIFTGTLAENIRLGNPEASNAEVELFARQAQLSELIDLSGDGINQSVGQKGSRLSGGERQRVAIARALIKKAPILILDEATSALDEVTEQKIAQQTQALGSTVI 273 D ++IPYD+L QHIAYVAQ+P+IFTGTLA+NIRLGNP AS+ EVE FAR AQL +LID S GI+Q+VGQ+GS LSGGERQRVAIARALIKKAPILI DEAT+ALDE TE+ IAQ Q L STVI Sbjct: 383 DLKSIPYDVLTQHIAYVAQEPVIFTGTLADNIRLGNPNASDYEVESFARHAQLDKLIDSSPKGIHQTVGQRGSGLSGGERQRVAIARALIKKAPILIFDEATAALDEATEKSIAQHIQTLNSTVI 507 HSP 2 Score: 65.855 bits (159), Expect = 1.887e-8 Identity = 47/139 (33.81%), Postives = 75/139 (53.96%), Query Frame = 0 Query: 2 LGSYELSTLTE--MSRHMAIRYVPQDIGVLKTTVRQNLQLTAPNACDSEFFDALALAEVDINLDYD-----------ASLLSGGQQQRVALASIFLNQASIFLLDEPTSALDKKTALSIMKNLTEFAQKENKTIIMVTH 127 LG +L ++ +++H+A YV Q+ + T+ N++L PNA D E A++D +D S LSGG++QRVA+A + +A I + DE T+ALD+ T SI +++ Q N T+I+VTH Sbjct: 379 LGGIDLKSIPYDVLTQHIA--YVAQEPVIFTGTLADNIRLGNPNASDYEVESFARHAQLDKLIDSSPKGIHQTVGQRGSGLSGGERQRVAIARALIKKAPILIFDEATAALDEATEKSIAQHI----QTLNSTVIIVTH 511 The following BLAST results are available for this feature:
BLAST of abc transporter vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 15
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BLAST of abc transporter vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of abc transporter vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1183_size56743:31356..33363- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1183_size56743-snap-gene-0.1 ID=maker-scaffold1183_size56743-snap-gene-0.1|Name=abc transporter|organism=Tigriopus kingsejongensis|type=gene|length=2008bp|location=Sequence derived from alignment at scaffold1183_size56743:31356..33363- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'abc transporter' has the following synonyms
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