atp-dependent dna helicase, maker-scaffold1194_size56121-snap-gene-0.1 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of atp-dependent dna helicase vs. L. salmonis genes
Match: EMLSAG00000001573 (supercontig:LSalAtl2s:LSalAtl2s1271:90201:96916:-1 gene:EMLSAG00000001573 transcript:EMLSAT00000001573 description:"maker-LSalAtl2s1271-augustus-gene-0.23") HSP 1 Score: 105.531 bits (262), Expect = 7.162e-27 Identity = 49/108 (45.37%), Postives = 70/108 (64.81%), Query Frame = 0 Query: 67 SSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDI 174 S I+Y +RK + A L G A YHAGL + +R+ Q WI+ K +++ +T AFGMGIDKP+VR V+H +P ++E YYQE+GRAGRD + + L Y+Y D+ Sbjct: 794 SGIIYCLSRKECDKTAEDLTASGIKALSYHAGLKDSERSRVQDQWIKDKVKVVCATIAFGMGIDKPDVRYVMHYSLPKSIEGYYQESGRAGRDGRPSNCILFYSYGDM 901 HSP 2 Score: 52.7582 bits (125), Expect = 1.129e-8 Identity = 20/39 (51.28%), Postives = 31/39 (79.49%), Query Frame = 0 Query: 1 LALLPTGGGKSVCFQVPGMIMTDLTLVITPLIALMKDQM 39 L+PTGGGKS+C+Q+P I +T+VI+PL++L+ DQ+ Sbjct: 591 FVLMPTGGGKSLCYQLPASIQGGVTVVISPLVSLIYDQV 629
BLAST of atp-dependent dna helicase vs. L. salmonis genes
Match: EMLSAG00000001574 (supercontig:LSalAtl2s:LSalAtl2s1271:98605:106214:1 gene:EMLSAG00000001574 transcript:EMLSAT00000001574 description:"maker-LSalAtl2s1271-augustus-gene-0.21") HSP 1 Score: 95.9005 bits (237), Expect = 1.845e-23 Identity = 53/139 (38.13%), Postives = 78/139 (56.12%), Query Frame = 0 Query: 64 PIGSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRD-------------EKKAFTFLLYNYSDISDSERWLDLKYPAIE 189 P G I+Y +TR T+++A+ L ++G YH GL + +R+ Q+ W + K ++ +T +FGMG+DK VR V H VP + YYQE+GRAGRD EK A FLL S+ + SER ++ AI+ Sbjct: 234 PCG--IIYCRTRDGTLQIASQLTKRGIPTLAYHGGLKDSERSRVQESWADGKVPVIAATISFGMGVDKATVRFVAHWSVPQTIAGYYQESGRAGRDGKPSFCRIYHSREEKGAIAFLLQQGSNKAKSERRKEVAKSAIK 370
BLAST of atp-dependent dna helicase vs. L. salmonis genes
Match: EMLSAG00000003002 (supercontig:LSalAtl2s:LSalAtl2s170:674355:677674:-1 gene:EMLSAG00000003002 transcript:EMLSAT00000003002 description:"maker-LSalAtl2s170-snap-gene-6.11") HSP 1 Score: 92.0485 bits (227), Expect = 3.578e-22 Identity = 47/128 (36.72%), Postives = 71/128 (55.47%), Query Frame = 0 Query: 48 DMTLDLPTLESEPLEKPIGSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDIS 175 D++L + E P GS+I+Y TRK ++ + L YHAGL+ + R + +I + ++ T AFGMGIDK +VR V+H P ++E+YYQE GRAGRD + + Y+ +D S Sbjct: 258 DLSLLMTKENGEDWVFPHGSTIIYCPTRKEVEKVGDVLTSNSVNHLLYHAGLSPKVRKKNHEDFIFDRCSLVVCTVAFGMGIDKSDVRLVVHYGAPRDMESYYQEIGRAGRDGMSSRVRVYYSTTDFS 385 HSP 2 Score: 48.521 bits (114), Expect = 3.473e-7 Identity = 20/39 (51.28%), Postives = 30/39 (76.92%), Query Frame = 0 Query: 1 LALLPTGGGKSVCFQVPGMIMTDLTLVITPLIALMKDQM 39 L ++ TG GKS+C+Q P + +TLVI+PLI+LM+DQ+ Sbjct: 77 LVVMATGYGKSLCYQFPAVYSGKVTLVISPLISLMEDQV 115
BLAST of atp-dependent dna helicase vs. L. salmonis genes
Match: EMLSAG00000001248 (supercontig:LSalAtl2s:LSalAtl2s1202:153682:156705:1 gene:EMLSAG00000001248 transcript:EMLSAT00000001248 description:"snap_masked-LSalAtl2s1202-processed-gene-0.15") HSP 1 Score: 80.4925 bits (197), Expect = 3.142e-18 Identity = 40/115 (34.78%), Postives = 66/115 (57.39%), Query Frame = 0 Query: 65 IGSSIVYAKTRKRTVELANFL---------NRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYN 170 +GS I+Y R+ +A + ++ A +HAGL++ +R +I K +I+ +T AFGMGI+K ++R V+H ++P LE+Y QE GRAGRDE +++ L + Sbjct: 491 LGSIIIYCTRREECERVAAIIRTRRRGENSSKNNIIASSFHAGLSHAKRKRIYNDFISGKLKIIVATIAFGMGINKSDIRGVVHYNMPSTLESYVQEIGRAGRDENESYCHLFMD 605
BLAST of atp-dependent dna helicase vs. L. salmonis genes
Match: EMLSAG00000005110 (supercontig:LSalAtl2s:LSalAtl2s26:913218:916036:-1 gene:EMLSAG00000005110 transcript:EMLSAT00000005110 description:"maker-LSalAtl2s26-augustus-gene-8.40") HSP 1 Score: 58.5362 bits (140), Expect = 1.218e-10 Identity = 37/114 (32.46%), Postives = 59/114 (51.75%), Query Frame = 0 Query: 51 LDLPTLESEPLEK-PIGS-----SIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGR 158 LDL LE+ L K P G+ ++V+ +TRK +L +L ++GF H T +R + + + I+ +T G+D PNV+ VI+ D+P ++E Y GR GR Sbjct: 428 LDL--LEAAGLAKGPAGNEDSSLTLVFVETRKGADQLDEYLYKEGFPVTSIHGDRTQREREDALRRFRSGNTPILVATAVAARGLDIPNVKHVINFDLPSDVEEYVHRIGRTGR 539
BLAST of atp-dependent dna helicase vs. L. salmonis genes
Match: EMLSAG00000002458 (supercontig:LSalAtl2s:LSalAtl2s1472:18624:24320:1 gene:EMLSAG00000002458 transcript:EMLSAT00000002458 description:"maker-LSalAtl2s1472-snap-gene-0.14") HSP 1 Score: 55.0694 bits (131), Expect = 1.858e-9 Identity = 34/131 (25.95%), Postives = 64/131 (48.85%), Query Frame = 0 Query: 59 EPLEKPIGSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDISDSERWLDLKYPAIE 189 E L+K +++A+ ++ + +L +G +A H G + R+ + + ++ +T+ G+D P ++ VI+ D+PD++E Y GR GR K + + N + D LDLK+ IE Sbjct: 1218 EMLKKTPPPVLIFAERKQDVDAIHEYLLLKGVSAVSVHGGKDQDDRSKAVTDFRNLRKDVLVATDVASKGLDFPCIQHVINYDMPDDIENYVHRIGRTGRGNFKGYATTMIN--KLVDENVLLDLKHLLIE 1346
BLAST of atp-dependent dna helicase vs. L. salmonis genes
Match: EMLSAG00000002581 (supercontig:LSalAtl2s:LSalAtl2s151:1305107:1306803:-1 gene:EMLSAG00000002581 transcript:EMLSAT00000002581 description:"maker-LSalAtl2s151-snap-gene-13.39") HSP 1 Score: 54.299 bits (129), Expect = 2.688e-9 Identity = 32/117 (27.35%), Postives = 55/117 (47.01%), Query Frame = 0 Query: 69 IVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGR--DEKKAFTFLLYNYSDISDSERWLDL 183 +++A T+ R +L L F D H T R + + I+ +T+ G+D +++ VI+ D P+N+E Y GR GR E K+F+F + ++ D + DL Sbjct: 330 LIFAATKIRVDQLVRKLKYWNFVVDGIHGDKTQAMRTRALDKFRSGRINILVATDVASRGLDVNDIKVVINYDFPNNIEDYVHRIGRTGRCSKEGKSFSF----FDEVEDGSKAKDL 442
BLAST of atp-dependent dna helicase vs. L. salmonis genes
Match: EMLSAG00000011189 (supercontig:LSalAtl2s:LSalAtl2s760:470421:474651:1 gene:EMLSAG00000011189 transcript:EMLSAT00000011189 description:"maker-LSalAtl2s760-augustus-gene-3.33") HSP 1 Score: 54.299 bits (129), Expect = 3.395e-9 Identity = 28/126 (22.22%), Postives = 60/126 (47.62%), Query Frame = 0 Query: 63 KPIGSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWI-----ESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDISDSERWLDL 183 +P +++ +T+++ EL + R G+ A H + K++ W+ I+ +T+ G+D +V+ VI+ D P+N E Y GR GR ++ + L+ + + ++ +D+ Sbjct: 360 EPHNKILIFVETKRKADELTRLMRRDGYPAMCIHG-----DKQQKERDWVLGEFKHGATTILXATDVAARGLDVDDVKFVINYDYPNNSEDYIHRIGRTGRKDRTGTAYTLFTSGNSAKAKDLVDV 480
BLAST of atp-dependent dna helicase vs. L. salmonis genes
Match: EMLSAG00000007141 (supercontig:LSalAtl2s:LSalAtl2s402:374905:376772:1 gene:EMLSAG00000007141 transcript:EMLSAT00000007141 description:"maker-LSalAtl2s402-augustus-gene-4.12") HSP 1 Score: 53.1434 bits (126), Expect = 7.358e-9 Identity = 26/110 (23.64%), Postives = 51/110 (46.36%), Query Frame = 0 Query: 65 IGSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDI 174 I ++++ T+++ L + F H + ++R+ K + + +++ +T+ + GID V VI+ D+P+N E Y GR+GR +K DI Sbjct: 267 ITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDAIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDI 376
BLAST of atp-dependent dna helicase vs. L. salmonis genes
Match: EMLSAG00000008048 (supercontig:LSalAtl2s:LSalAtl2s479:213954:217803:1 gene:EMLSAG00000008048 transcript:EMLSAT00000008048 description:"maker-LSalAtl2s479-augustus-gene-2.18") HSP 1 Score: 51.6026 bits (122), Expect = 2.880e-8 Identity = 41/126 (32.54%), Postives = 57/126 (45.24%), Query Frame = 0 Query: 61 LEKPIGSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEK--KAFTFLLYNYSDISDSERWLDLK 184 +E PI I++ +K +LA L + G+ A H G EQR I+ +T+ G GID NV VI+ D+ ++E Y GR GR K KA +F DS + DLK Sbjct: 595 IEPPI---IIFVNQKKGADKLAQGLEKMGYNAATLHGGKGQEQREYALSGLKAGNKDILVATDVAGRGIDIKNVSLVINYDMAKSIEPYTHRIGRTGRAGKSGKAISFCTQ-----EDSPLFYDLK 712
BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|1248281079|sp|Q9I920.2|BLM_CHICK (RecName: Full=Bloom syndrome protein homolog; AltName: Full=RecQ helicase homolog) HSP 1 Score: 117.087 bits (292), Expect = 2.295e-29 Identity = 55/119 (46.22%), Postives = 77/119 (64.71%), Query Frame = 0 Query: 64 PIGSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKG-QIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDISDSERWL 181 P S I+Y +R A L ++G AA YHAGLT+ R+ QK W+ +G Q++ +T AFGMGIDKP+VR VIH +P ++E YYQE+GRAGRD + + L Y+YSD++ R + Sbjct: 658 PHDSGIIYCLSRHECDTTAAILQKEGLAALAYHAGLTDSNRDLVQKKWVNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSIEGYYQESGRAGRDGEMSHCLLFYSYSDVTRLRRLI 776
BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|1705486|sp|P54132.1|BLM_HUMAN (RecName: Full=Bloom syndrome protein; AltName: Full=DNA helicase, RecQ-like type 2; Short=RecQ2; AltName: Full=RecQ protein-like 3) HSP 1 Score: 115.931 bits (289), Expect = 5.794e-29 Identity = 54/119 (45.38%), Postives = 77/119 (64.71%), Query Frame = 0 Query: 64 PIGSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKG-QIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDISDSERWL 181 P S I+Y +R+ +A+ L R G AA YHAGL++ R+ Q+ WI G Q++ +T AFGMGIDKP+VR VIH +P ++E YYQE+GRAGRD + + L Y Y D++ +R + Sbjct: 887 PYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLI 1005
BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|17366114|sp|Q9VGI8.1|BLM_DROME (RecName: Full=Bloom syndrome protein homolog; Short=Dmblm; AltName: Full=Bloom syndrome helicase ortholog; AltName: Full=Mutagen-sensitive protein 309; AltName: Full=RecQ helicase homolog) HSP 1 Score: 114.775 bits (286), Expect = 1.557e-28 Identity = 55/116 (47.41%), Postives = 76/116 (65.52%), Query Frame = 0 Query: 67 SSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDISDSERWLD 182 S I+Y +RK E + + + G A YHAGLT+ R ++QK W+ K +++ +T AFGMGIDKP+VR V+H +P ++E YYQEAGRAGRD A L YNYSD+ ++ LD Sbjct: 960 SGIIYCLSRKECDETSKKMCKDGVRAVSYHAGLTDTDRESRQKDWLTGKMRVICATVAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGDVADCILYYNYSDMLRIKKMLD 1075
BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|5921178|sp|O88700.1|BLM_MOUSE (RecName: Full=Bloom syndrome protein homolog; Short=mBLM; AltName: Full=RecQ helicase homolog) HSP 1 Score: 114.39 bits (285), Expect = 1.861e-28 Identity = 53/119 (44.54%), Postives = 77/119 (64.71%), Query Frame = 0 Query: 64 PIGSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWI-ESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDISDSERWL 181 P S I+Y +R+ +A+ L R+G AA YHAGL++ R+ Q WI + Q++ +T AFGMGIDKP+VR VIH +P ++E YYQE+GRAGRD + + L Y Y D++ +R + Sbjct: 895 PYDSGIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCVLFYTYHDVTRLKRLI 1013
BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|82000006|sp|Q5UPX0.1|YR290_MIMIV (RecName: Full=Putative ATP-dependent RNA helicase R290) HSP 1 Score: 112.849 bits (281), Expect = 3.986e-28 Identity = 51/118 (43.22%), Postives = 73/118 (61.86%), Query Frame = 0 Query: 64 PIGSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDISDSERWL 181 P S I+Y T+K T ++A+ L YHAGL+NE + +I +K +I+ +T AFGMGI+KP+VR VIH P N+E YYQE GRAGRD +K++ + YN+ D R++ Sbjct: 240 PNQSVIIYCLTKKETQKIADILTVHKVVCGIYHAGLSNEHKTKTHTNFINNKIKIVVATIAFGMGINKPDVRVVIHYGAPKNIEGYYQEIGRAGRDGEKSYCYAFYNFQDFMIQRRFI 357
BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|17366056|sp|Q9DEY9.1|BLM_XENLA (RecName: Full=Bloom syndrome protein homolog; Short=xBLM; AltName: Full=RecQ helicase homolog) HSP 1 Score: 112.849 bits (281), Expect = 5.621e-28 Identity = 56/154 (36.36%), Postives = 89/154 (57.79%), Query Frame = 0 Query: 32 IALMKDQMRHIVFQSGDMTLDLPTLESEPLEKPIGSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWI-ESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDISDSERWLDLK 184 ++ +D +++ V + L +E P S I+Y +R +A+ L ++G AA YHAGL + R+ Q WI + Q++ +T AFGMGIDKP+VR VIH +P ++E YYQE+GRAGRD + + L Y+Y D++ R + ++ Sbjct: 807 MSFNRDNLKYEVLPKKPKRVALDCVEWIKKHHPNDSGIIYCLSRHECDTMADTLQKEGLAALAYHAGLADSNRDYVQHKWINQDDCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGETSHCLLFYSYHDVTRIRRLIQME 960 HSP 2 Score: 55.4546 bits (132), Expect = 5.043e-8 Identity = 24/52 (46.15%), Postives = 38/52 (73.08%), Query Frame = 0 Query: 3 LLPTGGGKSVCFQVPGMIMTDLTLVITPLIALMKDQMRHIVFQSGDMTLDLP 54 L+PTGGGKS+C+Q+PG I +T+VI+PL +L+ DQ++ + +LD+P Sbjct: 640 LMPTGGGKSLCYQLPGCISPGVTIVISPLRSLIVDQVQKLT------SLDIP 685
BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|28201770|sp|O18017.2|BLM_CAEEL (RecName: Full=Bloom syndrome protein homolog; AltName: Full=High incidence of males protein 6; AltName: Full=RecQ helicase homolog) HSP 1 Score: 112.079 bits (279), Expect = 1.181e-27 Identity = 51/110 (46.36%), Postives = 71/110 (64.55%), Query Frame = 0 Query: 64 PIGSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSD 173 P S IVY +RK + L + G +A+ YHAGL + R + Q+ WI +K ++ +T AFGMGIDKP+VR VIH +P ++E YYQE GRAGRD ++ +LY+Y D Sbjct: 468 PGKSGIVYCLSRKECETVQMMLTKAGLSAEVYHAGLNDNLRVSVQRSWIANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGYYQETGRAGRDGMPSYCLMLYSYHD 577 HSP 2 Score: 52.373 bits (124), Expect = 4.108e-7 Identity = 25/70 (35.71%), Postives = 43/70 (61.43%), Query Frame = 0 Query: 1 LALLPTGGGKSVCFQVPGMIMTDLTLVITPLIALMKDQ---MRHIVFQSGDMTLDLPTLESEPLEKPIGS 67 L+PTG GKS+C+Q+P +I+ +T+V++PL +L++DQ M+ + +T DL E + +GS Sbjct: 266 FVLMPTGAGKSLCYQLPAVILPGVTVVVSPLRSLIEDQKMKMKELGIGCEALTADLGAPAQEKIYAELGS 335
BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|18202817|sp|Q9CL21.1|RECQ_PASMU (RecName: Full=ATP-dependent DNA helicase RecQ) HSP 1 Score: 107.071 bits (266), Expect = 5.912e-26 Identity = 68/192 (35.42%), Postives = 97/192 (50.52%), Query Frame = 0 Query: 8 GGKSVCF-QVPGMIMTDLTLVITPLIALMKDQMRHIVFQSGDM---TLDLPTLESEPLEK--PI------------GSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDISDSERWL 181 GG CF P M +T T A +D +RH+ QS + + D P + +EK P+ S I+Y +R + +A L +G +A YHAGL QR Q+ + Q++ +T AFGMGI+K NVR V+H D+P ++E+YYQE GRAGRD+ A L Y +D + WL Sbjct: 179 GGLKSCFPHAPIMALT-----ATADHATRQDILRHLNLQSPHVYIGSFDRPNIRYTLVEKFKPMEQLCRFVLGQKGKSGIIYCNSRSKVERIAESLRNKGVSAQAYHAGLETSQREQVQRAFQRDNVQVVVATIAFGMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYA----WL 361 HSP 2 Score: 55.4546 bits (132), Expect = 3.805e-8 Identity = 22/43 (51.16%), Postives = 33/43 (76.74%), Query Frame = 0 Query: 1 LALLPTGGGKSVCFQVPGMIMTDLTLVITPLIALMKDQMRHIV 43 L ++ TG GKS+C+Q+P + LTLVI+PLI+LMKDQ+ ++ Sbjct: 57 LVIMATGNGKSLCYQIPALCFEGLTLVISPLISLMKDQVDQLL 99
BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|54041622|sp|P15043.5|RECQ_ECOLI (RecName: Full=ATP-dependent DNA helicase RecQ) HSP 1 Score: 106.686 bits (265), Expect = 7.150e-26 Identity = 53/118 (44.92%), Postives = 74/118 (62.71%), Query Frame = 0 Query: 67 SSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDISDSERWLDLK 184 S I+Y +R + + A L +G +A YHAGL N R + Q+ + QI+ +T AFGMGI+KPNVR V+H D+P N+E+YYQE GRAGRD A L Y+ +D++ R L+ K Sbjct: 238 SGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEK 355 HSP 2 Score: 60.077 bits (144), Expect = 1.019e-9 Identity = 22/39 (56.41%), Postives = 35/39 (89.74%), Query Frame = 0 Query: 1 LALLPTGGGKSVCFQVPGMIMTDLTLVITPLIALMKDQM 39 L ++PTGGGKS+C+Q+P +++ LT+V++PLI+LMKDQ+ Sbjct: 44 LVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQV 82
BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|19859341|sp|P40724.3|RECQ_SALTY (RecName: Full=ATP-dependent DNA helicase RecQ) HSP 1 Score: 105.916 bits (263), Expect = 1.345e-25 Identity = 53/118 (44.92%), Postives = 74/118 (62.71%), Query Frame = 0 Query: 67 SSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDISDSERWLDLK 184 S I+Y +R + + A L +G +A YHAGL N R + Q+ + QI+ +T AFGMGI+KPNVR V+H D+P N+E+YYQE GRAGRD A L Y+ +D++ R L+ K Sbjct: 238 SGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRVDVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEK 355 HSP 2 Score: 60.077 bits (144), Expect = 1.164e-9 Identity = 22/43 (51.16%), Postives = 37/43 (86.05%), Query Frame = 0 Query: 1 LALLPTGGGKSVCFQVPGMIMTDLTLVITPLIALMKDQMRHIV 43 L ++PTGGGKS+C+Q+P +++ LT+V++PLI+LMKDQ+ ++ Sbjct: 44 LVVMPTGGGKSLCYQIPALLLDGLTVVVSPLISLMKDQVDQLL 86
BLAST of atp-dependent dna helicase vs. nr
Match: gi|1245965644|ref|WP_096194854.1| (RecQ family ATP-dependent DNA helicase [Cytophagales bacterium TFI 002] >gi|1243937487|emb|SOE23245.1| ATP-dependent DNA helicase RecQ [Cytophagales bacterium TFI 002]) HSP 1 Score: 186.808 bits (473), Expect = 1.945e-52 Identity = 82/129 (63.57%), Postives = 107/129 (82.95%), Query Frame = 0 Query: 61 LEKPIGSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDISDSERWLDLKYPAIE 189 L+K GS+IVY KTRKRT E+ANFL + F ADFYHAGL ++ RN KQK WI+S ++ +TNAFGMGIDKPNVR+V+H+D+P+N+EAYYQEAGRAGRD K+A+ F+LYN +DI D+ RW++L++P IE Sbjct: 221 LKKYGGSAIVYVKTRKRTQEVANFLKKLNFEADFYHAGLEHKIRNEKQKKWIDSPKGVVVATNAFGMGIDKPNVRSVVHLDIPENIEAYYQEAGRAGRDGKQAYAFILYNENDIEDASRWMELRFPPIE 349 HSP 2 Score: 69.3218 bits (168), Expect = 2.044e-10 Identity = 30/42 (71.43%), Postives = 36/42 (85.71%), Query Frame = 0 Query: 1 LALLPTGGGKSVCFQVPGMIMTDLTLVITPLIALMKDQMRHI 42 LALLPTGGGKS+CFQVPGM+ + +VITPLIALMKDQ+ + Sbjct: 34 LALLPTGGGKSICFQVPGMMKEGVVIVITPLIALMKDQVDQL 75
BLAST of atp-dependent dna helicase vs. nr
Match: gi|1134136823|ref|WP_076379778.1| (RecQ family ATP-dependent DNA helicase [Filimonas lacunae] >gi|1031984751|dbj|BAV10152.1| ATP-dependent DNA helicase RecQ [Filimonas lacunae] >gi|1132078129|emb|SIT18796.1| ATP-dependent DNA helicase RecQ [Filimonas lacunae]) HSP 1 Score: 170.244 bits (430), Expect = 3.347e-46 Identity = 79/131 (60.31%), Postives = 95/131 (72.52%), Query Frame = 0 Query: 59 EPLEKPIGSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDISDSERWLDLKYPAIE 189 E LEK GSSIVY TR+RT +++ L QG ADFYHAGL + R+ KQK WI + ++M TNAFGMGIDKP+VRTVIH DVPD LE YYQEAGRAGRD KKA+ LLY + D+ + D++YPAIE Sbjct: 222 EALEKVQGSSIVYCSTRRRTQDVSRLLQMQGIGADFYHAGLPQDDRSAKQKAWISGEVRVMVCTNAFGMGIDKPDVRTVIHYDVPDCLENYYQEAGRAGRDGKKAYAVLLYQHQDVEALQELPDMRYPAIE 352 HSP 2 Score: 65.0846 bits (157), Expect = 5.990e-9 Identity = 28/39 (71.79%), Postives = 33/39 (84.62%), Query Frame = 0 Query: 1 LALLPTGGGKSVCFQVPGMIMTDLTLVITPLIALMKDQM 39 ALLPTGGGKS+CFQVP M+ + LV+TPLIALMKDQ+ Sbjct: 35 FALLPTGGGKSLCFQVPAMMHRGVCLVVTPLIALMKDQV 73
BLAST of atp-dependent dna helicase vs. nr
Match: gi|1173342966|ref|WP_081199593.1| (RecQ family ATP-dependent DNA helicase [Niastella yeongjuensis] >gi|1095277181|emb|SEN08106.1| ATP-dependent DNA helicase RecQ [Niastella yeongjuensis] >gi|1172814379|gb|OQP50991.1| recombinase RecQ [Niastella yeongjuensis]) HSP 1 Score: 169.859 bits (429), Expect = 4.537e-46 Identity = 88/191 (46.07%), Postives = 120/191 (62.83%), Query Frame = 0 Query: 15 QVPGMIMTDLTLVITPLIALMKDQMRHIVFQSGDM---TLDLPTLE-------------SEPLEKPIGSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDISDSERWLDLKYPAIE 189 ++PG+ + LT TP A+ KD + F++ + + + P L +E L+K GSSIVY K+RKRT E+++ LN G ADFYHAGL E+R KQ WI + + + TNAFGMGIDKP+VR V+H DVPD LE YYQEAGRAGRDEKK++ LLYN D+ + ++ D+++P IE Sbjct: 161 ELPGIPVLALTASATP--AVQKDICEKLQFKNPSIFSRSFERPNLSYSVFTVDSKINKITEILQKVNGSSIVYCKSRKRTKEISDLLNTHGITADFYHAGLQQEERMRKQTAWINNSIRTIVCTNAFGMGIDKPDVRVVVHADVPDCLENYYQEAGRAGRDEKKSYAVLLYNNKDLEELQQLPDIRFPTIE 349 HSP 2 Score: 65.4698 bits (158), Expect = 4.944e-9 Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 0 Query: 1 LALLPTGGGKSVCFQVPGMIMTDLTLVITPLIALMKDQMRHI 42 LAL+PTGGGKS+CFQVP M L LVI+PLIALMKDQ+ ++ Sbjct: 34 LALMPTGGGKSLCFQVPAMAKEGLCLVISPLIALMKDQVDNL 75
BLAST of atp-dependent dna helicase vs. nr
Match: gi|655078095|ref|WP_028526225.1| (RecQ family ATP-dependent DNA helicase [Runella limosa]) HSP 1 Score: 167.933 bits (424), Expect = 2.053e-45 Identity = 73/129 (56.59%), Postives = 101/129 (78.29%), Query Frame = 0 Query: 61 LEKPIGSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDISDSERWLDLKYPAIE 189 L+ GSSI+Y + R+RT E+A++LNR G ADFYHAG+ N+QR+ KQ+ WI ++ ++M +TNAFGMGIDKP+VR+VIH+D+PD LEAYYQEAGRAGRD ++A+ LY+ D+ + R +D KYP I+ Sbjct: 220 LQNVQGSSIIYVRNRRRTKEVADWLNRNGIRADFYHAGVPNKQRSEKQEAWIRNRSRVMVATNAFGMGIDKPDVRSVIHIDLPDTLEAYYQEAGRAGRDGQRAYAVALYSQRDLDELARNVDQKYPPID 348 HSP 2 Score: 65.0846 bits (157), Expect = 5.815e-9 Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 0 Query: 1 LALLPTGGGKSVCFQVPGMIMTDLTLVITPLIALMKDQMRHI 42 LALLPTGGGKSVCFQVP + + +V+TPLIALMKDQ+ + Sbjct: 33 LALLPTGGGKSVCFQVPALAKEGVCIVVTPLIALMKDQVEQL 74
BLAST of atp-dependent dna helicase vs. nr
Match: gi|655257591|ref|WP_028668106.1| (RecQ family ATP-dependent DNA helicase [Runella zeae]) HSP 1 Score: 167.548 bits (423), Expect = 3.256e-45 Identity = 72/124 (58.06%), Postives = 101/124 (81.45%), Query Frame = 0 Query: 66 GSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDISDSERWLDLKYPAIE 189 GS+I+Y + R+RT E+A++LNRQG ++FYHAGL +QR++KQ+ WI ++ ++M +TNAFGMGIDKP+VR VIH+D+PDNLEAYYQEAGRAGRD +KA+ LY+ D+++ R +D KYP I+ Sbjct: 225 GSAIIYVRNRRRTKEVADWLNRQGIRSEFYHAGLPTKQRSDKQEAWIRNRVRVMVATNAFGMGIDKPDVRVVIHIDLPDNLEAYYQEAGRAGRDGQKAYAVALYSSKDLNELIRVVDQKYPPIQ 348 HSP 2 Score: 64.6994 bits (156), Expect = 8.839e-9 Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 0 Query: 1 LALLPTGGGKSVCFQVPGMIMTDLTLVITPLIALMKDQMRHI 42 LALLPTGGGKS+CFQVP + + +V+TPLIALMKDQ+ + Sbjct: 33 LALLPTGGGKSLCFQVPALAQEGICIVVTPLIALMKDQVEQL 74
BLAST of atp-dependent dna helicase vs. nr
Match: gi|1278368797|gb|PIZ06503.1| (RecQ family ATP-dependent DNA helicase, partial [Flavobacteriales bacterium CG_4_10_14_0_8_um_filter_32_5]) HSP 1 Score: 163.696 bits (413), Expect = 3.954e-45 Identity = 74/124 (59.68%), Postives = 98/124 (79.03%), Query Frame = 0 Query: 66 GSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDISDSERWLDLKYPAIE 189 G+S VY ++RK+T E+A FL + +ADFYHAGLTNE+RN KQ WIE++ +++ STNAFGMGIDKP+VRTV+H+D+PD+LEAY+QEAGRAGRDEKKA+ LL SD D E+ + +P I+ Sbjct: 23 GTSAVYVRSRKKTREIAQFLYQNNVSADFYHAGLTNEERNKKQHNWIENRTRVIVSTNAFGMGIDKPDVRTVVHLDLPDSLEAYFQEAGRAGRDEKKAYAVLLVQESDRMDLEQRIISSFPPID 146
BLAST of atp-dependent dna helicase vs. nr
Match: gi|1277004887|gb|PIQ15910.1| (hypothetical protein COW67_05820 [Flavobacteriales bacterium CG18_big_fil_WC_8_21_14_2_50_32_9]) HSP 1 Score: 163.696 bits (413), Expect = 4.653e-45 Identity = 74/124 (59.68%), Postives = 98/124 (79.03%), Query Frame = 0 Query: 66 GSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDISDSERWLDLKYPAIE 189 G+S VY ++RK+T E+A FL + +ADFYHAGLTNE+RN KQ WIE++ +++ STNAFGMGIDKP+VRTV+H+D+PD+LEAY+QEAGRAGRDEKKA+ LL SD D E+ + +P I+ Sbjct: 34 GTSAVYVRSRKKTREIAQFLYQNNVSADFYHAGLTNEERNKKQHNWIENRTRVIVSTNAFGMGIDKPDVRTVVHLDLPDSLEAYFQEAGRAGRDEKKAYAVLLVQESDRMDLEQRIISSFPPID 157
BLAST of atp-dependent dna helicase vs. nr
Match: gi|1232126425|gb|OYU65551.1| (recombinase RecQ [Cytophagaceae bacterium BCCC1]) HSP 1 Score: 166.007 bits (419), Expect = 1.172e-44 Identity = 76/126 (60.32%), Postives = 99/126 (78.57%), Query Frame = 0 Query: 61 LEKPIGSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDISDSERWLDLKYP 186 L+K G++IVYAKTR RTVE + FL G ++D+YHAGL+ ++RN KQ+ WI + ++M STNAFGMGIDKP+VR V+HVD+ +NLEAYYQE+GRAGRD +KA+ LYN +DI + E LDLKYP Sbjct: 222 LKKVEGTAIVYAKTRNRTVEFSKFLKANGISSDYYHAGLSLKERNKKQEDWINNITRVMVSTNAFGMGIDKPDVRCVVHVDLCENLEAYYQESGRAGRDNQKAYAVSLYNINDIENLEINLDLKYP 347 HSP 2 Score: 73.1738 bits (178), Expect = 8.719e-12 Identity = 30/42 (71.43%), Postives = 38/42 (90.48%), Query Frame = 0 Query: 1 LALLPTGGGKSVCFQVPGMIMTDLTLVITPLIALMKDQMRHI 42 LALLPTGGGKS+CFQVPGMI+ + +V++PLIALMKDQ+R + Sbjct: 35 LALLPTGGGKSICFQVPGMIVDGICIVVSPLIALMKDQVRQL 76
BLAST of atp-dependent dna helicase vs. nr
Match: gi|1309056013|gb|PKP43805.1| (RecQ family ATP-dependent DNA helicase, partial [Bacteroidetes bacterium HGW-Bacteroidetes-12]) HSP 1 Score: 163.31 bits (412), Expect = 3.105e-44 Identity = 73/124 (58.87%), Postives = 99/124 (79.84%), Query Frame = 0 Query: 66 GSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDISDSERWLDLKYPAIE 189 G+S+VY ++RK+T E+A FL + +ADFYHAGLTNE+R+ KQ WIE++ +++ STNAFGMGIDKP+VRTV+H+D+PD+LEAY+QEAGRAGRDEKKA+ LL SD D E+ + +P I+ Sbjct: 226 GTSVVYVRSRKKTREIAQFLYQNNISADFYHAGLTNEERSKKQHNWIENRTRVIVSTNAFGMGIDKPDVRTVVHLDLPDSLEAYFQEAGRAGRDEKKAYAVLLVQESDRMDLEQRIISSFPPID 349 HSP 2 Score: 66.6254 bits (161), Expect = 1.491e-9 Identity = 28/42 (66.67%), Postives = 35/42 (83.33%), Query Frame = 0 Query: 1 LALLPTGGGKSVCFQVPGMIMTDLTLVITPLIALMKDQMRHI 42 LALLPTGGGKS+CFQVP M + +VI+PLIALMKDQ+ ++ Sbjct: 34 LALLPTGGGKSICFQVPAMAKEGICIVISPLIALMKDQVENL 75
BLAST of atp-dependent dna helicase vs. nr
Match: gi|1167995817|ref|WP_080237692.1| (RecQ family ATP-dependent DNA helicase [Spirosoma rigui]) HSP 1 Score: 163.696 bits (413), Expect = 7.474e-44 Identity = 71/114 (62.28%), Postives = 95/114 (83.33%), Query Frame = 0 Query: 61 LEKPIGSSIVYAKTRKRTVELANFLNRQGFAADFYHAGLTNEQRNNKQKIWIESKGQIMTSTNAFGMGIDKPNVRTVIHVDVPDNLEAYYQEAGRAGRDEKKAFTFLLYNYSDI 174 LE+ GS+IVY ++RK+T ++A L+RQ +ADFYHAGLTNEQR+ KQ WI+++ ++M +TNAFGMGIDKP+VRTV+H+DVPD+LEAYYQEAGRAGRD +KA+ +LY D+ Sbjct: 221 LERVPGSAIVYVRSRKQTQQVAQLLSRQNISADFYHAGLTNEQRSAKQDAWIQNRTRVMVATNAFGMGIDKPDVRTVVHLDVPDSLEAYYQEAGRAGRDGQKAYAVMLYTSGDL 334 HSP 2 Score: 64.3142 bits (155), Expect = 1.082e-8 Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 0 Query: 1 LALLPTGGGKSVCFQVPGMIMTDLTLVITPLIALMKDQMRHI 42 L L+PTGGGKS+CFQVP + M + +V+TPLIALMKDQ+ + Sbjct: 34 LVLMPTGGGKSICFQVPTLAMKGVCIVVTPLIALMKDQVEQL 75 The following BLAST results are available for this feature:
BLAST of atp-dependent dna helicase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 13
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BLAST of atp-dependent dna helicase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of atp-dependent dna helicase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1194_size56121:14789..15785- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1194_size56121-snap-gene-0.1 ID=maker-scaffold1194_size56121-snap-gene-0.1|Name=atp-dependent dna helicase|organism=Tigriopus kingsejongensis|type=gene|length=997bp|location=Sequence derived from alignment at scaffold1194_size56121:14789..15785- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'atp-dependent dna helicase' has the following synonyms
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