replication protein a 70 kda dna-binding subunit, maker-scaffold11_size778918-snap-gene-6.54 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of replication protein a 70 kda dna-binding subunit vs. L. salmonis genes
Match: EMLSAG00000001089 (supercontig:LSalAtl2s:LSalAtl2s117:781815:785022:1 gene:EMLSAG00000001089 transcript:EMLSAT00000001089 description:"maker-LSalAtl2s117-snap-gene-7.40") HSP 1 Score: 625.55 bits (1612), Expect = 0.000e+0 Identity = 314/630 (49.84%), Postives = 420/630 (66.67%), Query Frame = 0 Query: 17 LTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSNSNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVS------ANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGT-RGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEEAG 639 LT GALL ICQG ++ PVLQ+LG KK+ SSSDRYR+ +SDG +SNSF+MLATQMN+KI +G L N+ ++ Y+C+N +KVIILL++D+ T E+ +G P +NPDGTV+ + + + D+ P +K++PL P+SSIL P+PV GS + + PI SLTPYQNKWTI+ RVT+KSDIRRW+NSRGEGHLFS D +YYI+ G LKAANKQ++ NN+YE+T +D++EV C D ++P+I+F+FVKI DLA AKDS+VD++GI K NE+ TSQRTQKE KRD+ VD S E N+T+WG A+TF+G+N PVV +K KVSDYNG SLS + SS +Q+NPD+PQAH LKGW+ESEG + SLTQS R N+ GS KT+GEVK N+G +E KP+YYST A I+MFQKD+ALY+ACNR ++G+ CNKKVV+ N YRCEKC MD D F WRI+L+ I DST++ WV CFQE AE IL +A++LG + E YN++F++A FK Y+ R+ CK++ YN E K RHT+ ++ P++Y E N +LI++L++ G Sbjct: 5 LTGGALLSICQGDRVENPVLQILGNKKI--NGSSSDRYRLLISDGDYSNSFAMLATQMNDKIHNGQLENYTVVSVKKYVCNNMQGKKVIILLDIDISTPGAEIGEKLGNPRAINPDGTVNEKPSSSGGNSSSSNQKRYGDDAGLNAPPSKKTPLAPQ--XPPRSSILXPRPVIGSSXXPST--------NIMPINSLTPYQNKWTIQGRVTNKSDIRRWSNSRGEGHLFSFD----------------------------VYYISQGVLKAANKQFNNTNNDYEITLKDTSEVSLCTDADKDVPTISFDFVKIADLAKCAKDSIVDIIGIVKVCNESVQFTSQRTQKEMRKRDLTFVDXSLTEXNVTVWGTMADTFEGSNFPVVAIKGAKVSDYNGXSLSTLISSTVQMNPDIPQAHKLKGWFESEGSNIETTSLTQSQLGRSNNMDSGSEGKTIGEVKYDNLGSSTE-KPDYYSTQALISMFQKDKALYQACNRVSEGRACNKKVVDN-NGSYRCEKCNMDNDEFNWRIILNLLIVDSTDSQWVNCFQESAESILGVSAQDLGHSFQHDEEKYNQIFKEANFKTYNFRIRCKADNYNGESKSRHTIMSLSPVNYEENNNKLIQELKQEG 592
BLAST of replication protein a 70 kda dna-binding subunit vs. L. salmonis genes
Match: EMLSAG00000012025 (supercontig:LSalAtl2s:LSalAtl2s856:330698:332713:-1 gene:EMLSAG00000012025 transcript:EMLSAT00000012025 description:"maker-LSalAtl2s856-augustus-gene-2.33") HSP 1 Score: 200.29 bits (508), Expect = 4.844e-56 Identity = 185/667 (27.74%), Postives = 302/667 (45.28%), Query Frame = 0 Query: 13 SHPSLTEGALLKICQ---GQTI---DKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSNSNNRKVIILLE---------VDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAA-NKQYSTLNNEYEMTFRDSTEVVPCKD---DAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMS--CN---EVNLTLWGQTAETFDG---ANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSAS---MLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSA-YIAMFQKDRALYKACNRTNDGKQCNKKVVE-----QGNDQ------YRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQA-ELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLE 636 S SLT G + KI + G I ++ +QVLG K + SS +YR+ +SDG S + Q S +L N NN + + N R + ++ V++ P E IG P ++ + + P A + + P +P+ P ++ + K + S + + H I +L P+ NK+ I RVT K +R+W+NSRGEG +F++ L D SGEI AT F E K + + G+ + I+ +KA +++Y++ + YEM + T VVP D D+ IP + + K+ D+A+ + VV+V+GI ++ + + KRD+ L D S CN VN+TLW DG ++ ++N KVSD+ G SLSA S S L +PD+PQA L W+ S QS S SL+Q + + G L E+ + +GK YY SA YI ++D+ ++KAC + C+KKV E DQ Y C C + F WR +L+ +AD + + W T F A ++ A +L + + N +N+ + + +++ K E + +++ + ++ N+RL + E Sbjct: 4 SESSLTPGVVSKILKDGDGDGILSSEEVYVQVLGTKVI---SSEEKKYRLCISDGVHRTSTVLFRPQ------SLTLTN---PPQNNSIINIGNKRSYVEIIRGRTAWFINSFKVISSPSE---QIGSP--------INFSQSIATPEASCDTERKVSIP---NTPVKRPLTDKDXGKLAKRKLNFNSASS----------LSTHEIRNLNPFTNKYKIVCRVTSKGTLRKWSNSRGEGVVFNVTLQDVSGEILATGFNETAKKLFPILVEGKAFCISGAQIKAVKDRRYNSTGHNYEMGLTEHTVVVPVDDSSSDSLKIPKLQIDITKLSDIADKVSNDVVNVVGIVVSFGSIQEISVSQGARTVLKRDMTLRDNSGECNGGSTVNVTLWDAKTNIDDGKIEVEKSIIALRNAKVSDWKGKSLSAGSGSTLIFDPDLPQAKLLYQWWNSSQQSVSNNTFNSLSQDSNKSS--GSTDKYFCLSEIVDEFKNNVDDGKVGYYVLSAVYITEIKRDKLMFKAC------ETCHKKVSETTKNNTNGDQEISEKVYICRSCNTHSNHFIWRYILNVGLADFSGHNWATVFDLVAFKMFGGMHATDLNNIMENNFNEFNQHIHSCQYNRWWLKIKAKVETWQKATRLKLIVIDCEKVNNKSENERLQSETE 626
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Match: gi|1350579|sp|P27694.2|RFA1_HUMAN (RecName: Full=Replication protein A 70 kDa DNA-binding subunit; Short=RP-A p70; AltName: Full=Replication factor A protein 1; Short=RF-A protein 1; AltName: Full=Single-stranded DNA-binding protein; Contains: RecName: Full=Replication protein A 70 kDa DNA-binding subunit, N-terminally processed) HSP 1 Score: 503.442 bits (1295), Expect = 1.431e-170 Identity = 273/626 (43.61%), Postives = 397/626 (63.42%), Query Frame = 0 Query: 17 LTEGALLKICQ-GQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEEAGI 640 L+EGA+ I Q G T KP+LQV+ + + +S RYR+ +SDG + S MLATQ+N + L++ C+ + + ++ + + R+V+IL+E++VL V IG P N +G A AP A AA S P P ++ + S G + SGG Q+ V PIASLTPYQ+KWTI ARVT+KS IR W+NSRGEG LFS++L+DESGEIRATAF EQ DK++ +EV ++YY + GTLK ANKQ++ + N+YEMTF + T V+PC+DD ++P++ F+F I DL N +KDS+VD++GICK +AT +T + +E KR+I L+D S V TLWG+ A+ FDG+ PV+ +K +VSD+ G SLS +SSS + NPD+P+A+ L+GW+++EGQ+ +S++ + G GG +N KTL EVK +N+G G KP+Y+S+ A + +K+ +Y+AC T D CNKKV++Q N YRCEKC + F +R++LS +IAD EN WVTCFQE AE IL + A LG L D+N + + +VFQ+A F+ + R+ K E YNDE +++ T+ V P+DY EY +RL+ + + + Sbjct: 5 LSEGAIAAIMQKGDTNIKPILQVINIRPITT-GNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEEQLSSNCVCQIHRFIVNTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYN-EGLGQPQVAPPAPAASPAASSRPQPQNGSSGMGSTVSKAYGASKTFGKAA--GPSLSHTSGG---TQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDH-HLPTVQFDFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKS-GGVGGSNTNWKTLYEVKSENLGQGD--KPDYFSSVATVVYLRKENCMYQAC-PTQD---CNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVMSIRRSAL 615
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Match: gi|75054872|sp|Q5R7Q4.1|RFA1_PONAB (RecName: Full=Replication protein A 70 kDa DNA-binding subunit; Short=RP-A p70; AltName: Full=Replication factor A protein 1; Short=RF-A protein 1) HSP 1 Score: 499.204 bits (1284), Expect = 6.622e-169 Identity = 272/626 (43.45%), Postives = 395/626 (63.10%), Query Frame = 0 Query: 17 LTEGALLKICQ-GQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEEAGI 640 L+EGA+ I Q G T KP+LQV+ + + +S RYR+ +SDG + S M ATQ+N + L++ C+ + N ++ + + R+V+IL+E++VL V IG P N +G A AP A AA S P P ++ + S G + SGG Q+ V PIASLTPYQ+KWTI ARVT+KS IR W+NSRGE LFS++L+DESGEIRATAF EQ DK++ +EV ++YY + GTLK ANKQ++ + N+YEMTF + T V+PC+DD ++P++ F+F I DL N +KDS+VD++GICK +AT +T + +E KR+I L+D S V TLWG+ A+ FDG+ PV+ +K +VSD+ G SLS +SSS + NPD+P+A+ L+GW+++EGQ+ +S++ + G GG +N KTL EVK +N+G G KP+Y+S+ A + +K+ +Y+AC T D CNKKV++Q N YRCEKC + F +R++LS +IAD EN WVTCFQE AE IL + A LG L D+N + + +VFQ+A F+ + R+ K E YNDE +++ T+ V P+DY EY +RL+ + + + Sbjct: 5 LSEGAIAAIMQKGDTNIKPILQVINIRPITT-GNSPPRYRLLMSDGLNTLSSFMSATQLNPLVEQEQLSSNCVCQINRFIVNTLKDGRRVVILMELEVLKSAEVVGVKIGNPVPYN-EGLGQPQVAPPAPAASPAASSRPQPQNGTSGAGSTVSKAYGASKTFGKAA--GPSLSHNSGG---TQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEEKLFSLELVDESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDH-HLPTVQFDFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKSGGVGGG-NTNWKTLYEVKSENLGQGD--KPDYFSSVATVVYLRKENCMYQAC-PTQD---CNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVMSIRRSAL 615
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Match: gi|75571284|sp|Q5ZJJ2.1|RFA1_CHICK (RecName: Full=Replication protein A 70 kDa DNA-binding subunit; Short=RP-A p70; AltName: Full=Replication factor A protein 1; Short=RF-A protein 1) HSP 1 Score: 493.812 bits (1270), Expect = 7.206e-167 Identity = 267/623 (42.86%), Postives = 383/623 (61.48%), Query Frame = 0 Query: 17 LTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPAS--ESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDG-GIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDL 635 L+EGA+ I QG+ + KPVLQV+ + +A + RYRV +SDG + S MLATQ+N + L+ C+ + N ++ ++ + R+V+IL+++DVL V T+G P N G + + A++ P P + L+ PK + S P+S GG Q+ V PIASL PYQ+KWTI ARVT K IR W+NSRGEG LFS++L+DESGEIRATAF +Q DK++ +E+ ++YY T G LK ANKQY+ + N+YE+TF + T VVPC DDA ++PS+ F+FV I DL N KDS+VDV+GICK + T + + + +E +KR++ L+D S V TLWG AE FDG+ PV+ +K +VSD+ G SLS +SSS + +NPD P+A L+GW++SEGQ S+ S RG G+ +N KTL E K + +G G K +Y+S I +K+ +Y+AC + CNKKV++Q N YRCEKC + F +R++L +IADS + WVTCFQE AE IL ++A LG L D+N + + +VFQ+A F Y+ ++ K E YNDE +++ T V P++Y EY+KRLI + Sbjct: 5 LSEGAIAAIMQGENVYKPVLQVINTRAIAT-GNGPPRYRVLMSDGVNTLSSFMLATQLNPLVEEERLSAHCICQVNRFIVNSLKDGRRVVILMDLDVLKTADMVGGTVGNPVPYN-------EGQGQQRSSAPTANAAPNKPQQQDGNLSVAGSAAPKYHAPSNQFSKASAPSSVKTPGG---TQSKVVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADKFFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFNNETSVVPC-DDAQHLPSVQFDFVSISDLENTPKDSIVDVIGICKSYEDVTKIVVKASNREVSKRNVHLMDTSGKLVTATLWGNEAEKFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVVNPDSPEAFKLRGWFDSEGQLLECASI--SDVRGGSASGVNTNWKTLYEAKSERLGQGD--KADYFSCVGTIVHLRKENCMYQAC----PSQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLLVTIADSLDYQWVTCFQESAEFILGQSATFLGELKDKNEQAFEEVFQNANFNTYEFKIRVKLETYNDESRIKATALDVKPVNYREYSKRLIASI 607
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Match: gi|81879403|sp|Q8VEE4.1|RFA1_MOUSE (RecName: Full=Replication protein A 70 kDa DNA-binding subunit; Short=RP-A p70; AltName: Full=Replication factor A protein 1; Short=RF-A protein 1) HSP 1 Score: 491.886 bits (1265), Expect = 6.755e-166 Identity = 266/629 (42.29%), Postives = 398/629 (63.28%), Query Frame = 0 Query: 17 LTEGAL-LKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPD-GTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSP--NGNRPKSSILDPKPV---YGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEE 637 L+EGA+ + I Q T KP+LQV+ + ++ + S RYR+ +SDG + S MLATQ+N + G LA+ C+ + + ++ + + RKV++L++++V+ +V IG P N G ++ A + S TPP +K P G+ + KP G+ SGG Q+ V PIASLTPYQ+KWTI ARVT+KS IR W+NSRGEG LFS++L+DESGEIRATAF EQ DK++ +EV ++YY + G LK ANKQ+S + N+YEMTF + T V+PC +D ++P++ F+F I DL + AKD++VD++GICK ++ +T + +E KR+I L+DMS V TLWG+ A+ FDG+ PV+ +K +VSD+ G SLS +SSS + +NPD+P+A+ L+GW++SEGQ+ +S++ + G GG +N KTL E K +N+G G K +Y+ST A + +K+ +Y+AC T D CNKKV++Q N YRCEKC + F +R++LS +IAD EN WVTCFQE AE IL + LG L ++N + + +VFQ+A F+ + R+ K E YNDE +++ T+ V P+D+ +Y +RLI ++ + Sbjct: 5 LSEGAIEVMIQQENTSIKPILQVINIRPIST-GNRSPRYRLLMSDGLNTLSSFMLATQLNTLVEGGQLASNCVCQVHKFIVNTLKDGRKVVVLMDLEVMKSAEDVGLKIGNPVPYNEGYGQQQQQQQQQQQQAVPSPASAATPPASKPQPQNGSLGMGSTAAKAYGASKPFGKPAGTGLLQPSGG---TQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGALKIANKQFSAVKNDYEMTFNNETSVLPC-EDGHHLPTVQFDFTGIGDLESKAKDALVDIIGICKSYEDSIKITVKSNNREVAKRNIYLMDMSGKVVTTTLWGEDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQALDGVSISDHRSGGAGGG-NTNWKTLHEAKSENLGQGD--KADYFSTVAAVVFLRKENCMYQAC-PTQD---CNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQWVTCFQESAEAILGQNTMYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDFRDYGRRLIANIRK 621
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Match: gi|2498844|sp|Q24492.1|RFA1_DROME (RecName: Full=Replication protein A 70 kDa DNA-binding subunit; Short=RP-A p70; AltName: Full=Replication factor A protein 1; Short=RF-A protein 1; AltName: Full=Single-stranded DNA-binding protein; Short=DmRPA1) HSP 1 Score: 489.96 bits (1260), Expect = 1.840e-165 Identity = 263/634 (41.48%), Postives = 388/634 (61.20%), Query Frame = 0 Query: 12 MSHPSLTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCS----NSNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKD-DAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYN-GVSLSAVSSSVLQINPDMPQAHALKGWYESEG--QSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEE 637 M SL+ G + +I G+ +D PVLQ+L KK+ N ++ S+RYR+ +SDG++ NS++MLA+Q+N +G L F +++ + Y+ S + ++V+I+ E+ V+ EV IGEP T N AK+ K A S+ + P+AK+ P S + V S S HPI+SL+PYQNKW IKARVT KS IR W+N+RGEG LFSMDL+DESGEIRATAFKEQCDK+Y+ ++V +YYI+ LK ANKQYS+LNN YEMTF T V C+D D IP I +N V I D++ + VD +GICKE E + ++ T KEF KRDI LVDMS + ++LTLWG A FDG PV++VK +++++N G SLS S+++INPD+P+AH L+GW+++ G A+M+S R G + TL + + +N+G G KP+Y+ A + + +++ A Y+AC +++ CNKKVV++GNDQ+RCEKC F +R++++ SI D T N WV+ F E E +L T++E+G + +P ++F F + +L CK+E Y D + + T+++V PI++ EYNK L+K+L+E Sbjct: 1 MVLASLSTGVIARIMHGEVVDAPVLQILAIKKI-NSAADSERYRILISDGKYFNSYAMLASQLNVMQHNGELEEFTIVQLDKYVTSLVGKDGAGKRVLIISELTVVNPGAEVKSKIGEPVTYE-------NAAKQDLAPKPAVTSN-SKPIAKKEP----------SHNNNNNIVMNSSINS---------GMTHPISSLSPYQNKWVIKARVTSKSGIRTWSNARGEGKLFSMDLMDESGEIRATAFKEQCDKFYDLIQVDSVYYISKCQLKPANKQYSSLNNAYEMTFSGETVVQLCEDTDDDPIPEIKYNLVPISDVSGMENKAAVDTIGICKEVGELQSFVARTTNKEFKKRDITLVDMSNSAISLTLWGDDAVNFDGHVQPVILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRGWFDNGGGDSVANMVS-----ARTGGGSFSTEWMTLKDARARNLGSGD--KPDYFQCKAVVHIVKQENAFYRACPQSD----CNKKVVDEGNDQFRCEKCNALFPNFKYRLLINMSIGDWTSNRWVSSFNEVGEQLLGHTSQEVGEALENDPAKAEQIFSALNFTSHIFKLRCKNEVYGDMTRNKLTVQSVAPINHKEYNKHLLKELQE 595
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Match: gi|82185887|sp|Q6NY74.1|RFA1_DANRE (RecName: Full=Replication protein A 70 kDa DNA-binding subunit; Short=RP-A p70; AltName: Full=Replication factor A protein 1; Short=RF-A protein 1) HSP 1 Score: 481.1 bits (1237), Expect = 4.924e-162 Identity = 252/627 (40.19%), Postives = 385/627 (61.40%), Query Frame = 0 Query: 17 LTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCL-IRANNYMCSNSNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGN-----RPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEE 637 L+EGA+ + +G ++ P+LQ + +K+ + S R+RV +SDG + S ML+TQ+N LA C+ + + + R+V+++L+++VL ++ IG+PT G KAP T P PL NG+ RP + KP+ + P + G + V PIASL PYQ+KWTI+ARVT+KS IR W+NSRG+G LFSM+L+DESGEIRAT F + DK+++ +E G+++YI+ GTLK ANKQ+S+L N+YEMT T ++PC +D+ ++P + +FV I DL + KD+++DV+G+CK + + ++ + +E +KR+I+L+DMS + LT+WG AETFDG+ P++ +K ++SD+ G SLS + SS + INPD+P+A+ L+GWY+ EG + S+T+ RG GG +N KTL EVK +++G G K +Y+S A I +K+ LY+AC K CNKKVV+Q N +RCEKC + F +R++LS +IAD +N WVTCFQ+ AE +L + + LG L D N +++VFQ A F + R K E YNDE +++ T+ P+D+ EY+KRLI ++ + Sbjct: 5 LSEGAIESLSKGTEVNNPILQCVNIRKIDGGNGVS-RFRVMMSDGLHTMSSFMLSTQLNPMAEQNQLATNCVCVLKRSVTNVLKDGRRVVVILDIEVLKSADQMPGKIGDPTPY-------VEGQSKAPS---------TAPAPTARPLQPQNGSDGSTYRPSAQSFGKKPM--AAPNTPGG-----SSKVVPIASLNPYQSKWTIRARVTNKSAIRTWSNSRGDGKLFSMELVDESGEIRATGFNNEVDKFFSLIEQGKVFYISKGTLKIANKQFSSLKNDYEMTLNGETSIIPC-EDSNDVPMLQCDFVSIADLESREKDTILDVIGVCKNAEDVARIMTKNS-REVSKRNIQLIDMSGRVIQLTMWGSDAETFDGSGQPILAIKGARLSDFGGRSLSTLYSSTVMINPDIPEAYKLRGWYDKEGHALDGQSMTE--LRGPGGGGNTNWKTLAEVKNEHLGHGD--KADYFSCIATIVYIRKENCLYQAC----PSKDCNKKVVDQQNGMFRCEKCDKEFPDFKYRLMLSANIADFGDNQWVTCFQDTAETLLGQNSSYLGQLKDTNEAAFDEVFQHANFNTFVFRNRVKLETYNDESRIKVTVVDAKPVDHREYSKRLIINIRK 597
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Match: gi|82194954|sp|Q5FW17.1|RFA1_XENTR (RecName: Full=Replication protein A 70 kDa DNA-binding subunit; Short=RP-A p70; AltName: Full=Replication factor A protein 1; Short=RF-A protein 1) HSP 1 Score: 478.789 bits (1231), Expect = 4.763e-161 Identity = 266/630 (42.22%), Postives = 395/630 (62.70%), Query Frame = 0 Query: 12 MSHPSLTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLN---PDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEE 637 M+ P L+EGA+ I G + KP LQV+ + + N + RYR+ +SDG + S MLATQ+N + + LA C+ + + ++ +N + R+VII++E++VL V IG P N +A APP + + PP P+ NR S + G + GG Q+ V PIASL PYQ+KWT++ARVT+K IR W+NSRGEG LFS++++DESGEIRATAF EQ DK+++ +EV ++YY + GTLK ANKQY+++ N+YEMTF T V+PC DD+ ++P + F FV I +L + KD+V+D++GICK E T +T + +E +KR+I L+D S V+ TLWG+ A+ FDG+ PVV +K ++SD+ G SLS +SSS + INPD+P+A L+ W++SEGQ S+++S RG GG +N K+L EVK +N+G G K +Y+++ A I +K+ LY+AC + CNKKV++Q N +RCEKC + + +R++LS +IAD EN W+TCFQE AE IL + A LG L ++N + Y++VFQ+A F+ Y R+ K E YNDE +++ T V P+D+ EY++RLI ++ + Sbjct: 1 MALPVLSEGAISAILGGDSSCKPTLQVINIRSI-NTGNGPPRYRLLMSDGLNTLSSFMLATQLNFLVDNNLLATNCICQVSRFIVNNLKDGRRVIIVMEMEVLKSADLVKGKIGNPHPYNDGQGPPQPAAPAPASAPPPSKPQNISAPPP---------PSMNRGASKLFG-----GGSVVNTPGG---SQSKVVPIASLNPYQSKWTVRARVTNKGQIRTWSNSRGEGKLFSIEMVDESGEIRATAFNEQADKFFSLIEVNKVYYFSKGTLKIANKQYTSVKNDYEMTFNSETSVIPC-DDSADVPMVQFEFVPIGELESKNKDTVLDIIGICKNAEEVTKVTIRSNNREVSKRNINLMDSSGKVVSTTLWGEDADKFDGSRQPVVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEAFKLRAWFDSEGQVVEGTSISES--RGGTGGGNTNWKSLLEVKTENLGHGE--KADYFTSVATIVYLRKENCLYQAC----PSQDCNKKVIDQQNGLFRCEKCDKEFPNYKYRLILSANIADFGENQWITCFQESAESILGQNATYLGELKEKNEQAYDEVFQNANFRSYTFRIRVKLETYNDESRIKATAMDVKPVDHKEYSRRLIMNIRK 603
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Match: gi|400975|sp|Q01588.1|RFA1_XENLA (RecName: Full=Replication protein A 70 kDa DNA-binding subunit; Short=RP-A p70; AltName: Full=Replication factor A protein 1; Short=RF-A protein 1; AltName: Full=Single-stranded DNA-binding protein) HSP 1 Score: 476.863 bits (1226), Expect = 2.631e-160 Identity = 265/630 (42.06%), Postives = 391/630 (62.06%), Query Frame = 0 Query: 12 MSHPSLTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAA---DSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEE 637 M+ P L+EGA+ + G + KP LQV+ + + N + RYR+ +SDG + S MLATQ+N + + LA C+ + + ++ +N + R+VII++E+DVL V IG P N DG A A ++ PP P+ NR S + G + GG Q+ V PIASL PYQ+KWT++ARVT+K IR W+NSRGEG LFS++++DESGEIRATAF EQ DK+++ +EV ++YY + GTLK ANKQY+++ N+YEMTF T V+PC DD+ ++P + F FV I +L + KD+V+D++G+CK E T +T + +E +KR I L+D S V+ TLWG+ A+ FDG+ PVV +K ++SD+ G SLS +SSS + INPD+P+A L+ W++SEGQ S+++S G GG +N K+L EVK +N+G G K +Y+++ A I +K+ LY+AC + CNKKV++Q N +RCEKC + F +R++LS +IAD EN W+TCFQE AE IL + A LG L ++N + Y++VFQ+A F+ Y R K E YNDE +++ T V P+D+ EY++RLI ++ + Sbjct: 1 MALPQLSEGAISAMLGGDSSCKPTLQVINIRPI-NTGNGPPRYRLLMSDGLNTLSSFMLATQLNSLVDNNLLATNCICQVSRFIVNNLKDGRRVIIVMELDVLKSADLVMGKIGNPQPYN-DGQPQPAAPAPASAPAPAPSKLQNNSAPP---------PSMNRGTSKLFG-----GGSLLNTPGG---SQSKVVPIASLNPYQSKWTVRARVTNKGQIRTWSNSRGEGKLFSIEMVDESGEIRATAFNEQADKFFSIIEVNKVYYFSKGTLKIANKQYTSVKNDYEMTFNSETSVIPC-DDSADVPMVQFEFVSIGELESKNKDTVLDIIGVCKNVEEVTKVTIKSNNREVSKRSIHLMDSSGKVVSTTLWGEDADKFDGSRQPVVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEAFKLRAWFDSEGQVVEGTSISES-RGGGTGGGNTNWKSLLEVKNENLGHGE--KADYFTSVATIVYLRKENCLYQAC----PSQDCNKKVIDQQNGLFRCEKCNKEFPNFKYRLILSANIADFGENQWITCFQESAESILGQNATYLGELKEKNEQAYDEVFQNANFRSYTFRARVKLETYNDESRIKATAVDVKPVDHKEYSRRLIMNIRK 603
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Match: gi|2498845|sp|Q92372.1|RFA1_SCHPO (RecName: Full=Replication factor A protein 1; AltName: Full=Single-stranded DNA-binding protein p68 subunit) HSP 1 Score: 368.237 bits (944), Expect = 4.132e-118 Identity = 209/612 (34.15%), Postives = 343/612 (56.05%), Query Frame = 0 Query: 34 PVLQVLGFKKLANQSSSS--DRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSNSNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSA-----SMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEEA 638 P+LQVL K+L + +S RYRV +SD + + SML+TQ+N + L ++ + + RK++I+L ++VLT+ G V IG NP G + + ++ + A + P + S GN ++ P P+ A S + ++PI L+PYQNKWTI+ARVT+KS+++ W+N RGEG LFS++LLDESGEIRAT F +Q D +Y+ ++ G +YYI+ + A KQY+ + NEYE+ F TE+ +D +P F+FV ++++ + AKD+V+DV+G+ + +TS+ T + F KRDI +VD + E+ +TLWG+TA F + ++ K KV+D+ G SLS ++SS + ++PD+ ++H LKGWY+ +G+ S++S T S T G + K + EV+ +++GM P+Y+S I +K Y AC CNKKV +QG +RCEKC + D +R +++ ++ D T W+ F + +LI++KTA+EL L + + + +A + Y + K + + E +VR+T+ ++ +D+ E +KRLI +E A Sbjct: 25 PILQVLTVKELNSNPTSGAPKRYRVVLSDS-INYAQSMLSTQLNHLVAENKLQKGAFVQLTQFTVNVMKERKILIVLGLNVLTELG-VMDKIG-----NPAGLETVDALRQQQNEQNNASA---PRTGISTSTNSFYGNNAAATAPAPPPMMKKPAAPNS-----LSTIIYPIEGLSPYQNKWTIRARVTNKSEVKHWHNQRGEGKLFSVNLLDESGEIRATGFNDQVDAFYDILQEGSVYYISRCRVNIAKKQYTNVQNEYELMFERDTEIRKAEDQTA-VPVAKFSFVSLQEVGDVAKDAVIDVIGVLQNVGPVQQITSRATSRGFDKRDITIVDQTGYEMRVTLWGKTAIEFSVSEESILAFKGVKVNDFQGRSLSMLTSSTMSVDPDIQESHLLKGWYDGQGRGQEFAKHSVISSTLSTT-----GRSAERKNIAEVQAEHLGMSE--TPDYFSLKGTIVYIRKKNVSYPAC----PAADCNKKVFDQGGS-WRCEKCNKEYDAPQYRYIITIAVGDHTGQLWLNVFDDVGKLIMHKTADELNDLQENDENAFMNCMAEACYMPYIFQCRAKQDNFKGEMRVRYTVMSINQMDWKEESKRLINFIESA 608
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Match: gi|75337354|sp|Q9SKI4.1|RFA1A_ARATH (RecName: Full=Replication protein A 70 kDa DNA-binding subunit A; Short=AtRPA70A; AltName: Full=AtRPA1-3; AltName: Full=Replication factor A protein 1A; AltName: Full=Replication protein A 1A; Short=AtRPA1A) HSP 1 Score: 363.999 bits (933), Expect = 4.499e-116 Identity = 219/642 (34.11%), Postives = 344/642 (53.58%), Query Frame = 0 Query: 16 SLTEGALLKICQGQTIDKPVLQVLGFKKLA-NQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSNSNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSA---NGAKKAPPAKRAADSDPTPPMA-KRSPLTSPN----GNRPKSSILDPKPVYGSHPASESGGFDPMQ-----ATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLD-ESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWG--------QTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALH--DQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLI 632 SLT A+ I G KP+LQVL K + +Q S +RYR +SDG S +M+A Q+N+++ SG +++ +Y+CS+ RK+I++L ++ + Q E TIG PT T + +G PP R ++P + R+P N N S +P Y P + P+ A V PIA+L PYQ +W IKARVT K DIRR+NN++G+G +FS DLLD + GEIR T F D++Y+ EVG++Y I+ G+LK A K ++ L NE+E+ ++ V C D+ +IP F+F I D+ NA ++++DV+G+ N + + ++ E +R + L D S V +TLWG Q E D A +PV+ +K KVSD++G S+ +SS+ L INPD P+AH L+ W++ G+ + S+++ GG+ N +I+ G+G KP++ + A I+ + D Y AC KQCNKKV G +++ C++C + D +R +L I D T TW+T FQE E I+ A++L A+ + E + ++ +D F Y ++L K E Y DEQ+V+ T+ V ++Y +K ++ Sbjct: 4 SLTPNAITAIHDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDG-VSAQHAMVAVQLNDRVKSGQFEKGSIVQLIDYICSDVKGRKLIVVLNMETIVQQSE---TIGNPTIFGETDTEAQKTFSGTGNIPPPNRVVFNEPMVQHSVNRAPPRGVNIQNQANNTPSFRPSVQPSY--QPPASYRNHGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNALVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRPISDIENAENNTILDVIGVVTSVNPSVPIL-RKNGMETHRRILNLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKDTASFSISRDTM---PGGVSRNEIRKNVSQIKEEGLGRSDKPDWITVKATISFIKTDSFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTVVKVDKVNYTSESKYML 635
BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Match: gi|919076392|ref|XP_013419280.1| (replication protein A 70 kDa DNA-binding subunit isoform X2 [Lingula anatina]) HSP 1 Score: 519.235 bits (1336), Expect = 3.160e-174 Identity = 269/631 (42.63%), Postives = 412/631 (65.29%), Query Frame = 0 Query: 12 MSHPSLTEGALLKICQGQTIDKPVLQVLGFKKLANQS-SSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANG-AKKAPPAK--RAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEE 637 MS LT GA+ I G+T+++PVLQVLG KK+A S+++R+R+ +SDG S S +ML TQ+N +L+G L + ++R + ++C+ +R+V+ILLE+ ++ + EV +G P GT +A G A + PP + A S+ P A++S T + + + PK ++ GG P V+PI +LTPYQN+WTI+AR+T+KS+IR W+NSRGEG LFSM DESGEIRATAFK + DK+Y+ +EV ++YY+T TLK ANKQYS+++N+YEMT +++ C +D ++P++TFNF I L N A ++ VDV+G+ K + +T+ ++ TQKE KR++ LVD + +NLTLWG+TAE FDG+N+PV+ +K ++SD+ G SLS +SSS L +NPD+ +AH LKGWY+ +G + ++ G +N K+ VK +N +G+ KP+YYS + +K+ +Y+AC + + CNKKVV+Q N YRCEKC ++ + WR++LS ++AD ++N WVTCFQE E +L K+A+ELG+L + + ++++FQ+ATFK Y +L K E YNDE +++ + PIDY EYN++LI+D+E+ Sbjct: 1 MSVSMLTAGAIRDIVTGKTVEQPVLQVLGHKKIAGSGGSATERFRLLLSDGVNSQSSAMLGTQLNYLVLNGELEDNSIVRLDKFICNTIPPDRRVMILLELSIIKRGSEVPGKLGNPVPFK--GTAAAGGDANRNPPQQTNEHAASNGAPEQAQQS--TGQTNSFYGKNNVTPKAYGNNNLPQTPGGSTP---KVYPITALTPYQNRWTIRARLTNKSNIRTWSNSRGEGKLFSMTFTDESGEIRATAFKAEVDKFYDILEVNKVYYVTKATLKTANKQYSSVDNDYEMTLNRDSQIEECTEDV-DLPTVTFNFTPINALGNMAPNTTVDVIGVVKSVADVSTIIAKATQKELKKREVSLVDQNQVMINLTLWGETAEGFDGSNHPVLAIKGARLSDFGGRSLSTLSSSQLIVNPDIEEAHRLKGWYDRDGHNLDFQQY-RNEGGQGGSGGATNWKSFAAVKQEN--IGATEKPDYYSAKGTVIFMRKENCMYQACPKMD----CNKKVVDQSNGLYRCEKCQLEYPNYKWRMILSANLADYSDNQWVTCFQETTETLLGKSADELGSLRESDEASFDQIFQEATFKSYTFKLRAKQETYNDESRLKTIVVNATPIDYREYNRKLIQDIEK 616
BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Match: gi|1009528242|ref|XP_015920041.1| (replication protein A 70 kDa DNA-binding subunit-like [Parasteatoda tepidariorum] >gi|1009528245|ref|XP_015920047.1| replication protein A 70 kDa DNA-binding subunit-like [Parasteatoda tepidariorum]) HSP 1 Score: 518.079 bits (1333), Expect = 3.373e-174 Identity = 270/624 (43.27%), Postives = 390/624 (62.50%), Query Frame = 0 Query: 15 PSLTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSNSN-NRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEE 637 P LT GA+ +I QG+ + VLQ+LG KK+ + +DRYR+ +SDG F+ML TQ+N + + L F ++R + +C+ +RKVIILL + VL EV+ IG P + A A + P AK P N ++S+++ VHPI+SLTPYQNKWTIK RVT+K+ +R ++N+RGEG LFSM+LLDESGEI+ATAF + KYY+ +EVG++YY++ LK A+K+YS+L NEYE+TF + T V+PC +++ +IPS+ F+FV I ++ KD+ +DV+G+CK +ATTL S++ KE KR++KLVD S EV+LTLWG AE FDG +NPV+ VK +VS++NG +LS SS +QINPD+ +AH LKGW+E EG + + S++ G G+ GG + KT + + +GMG KP+YY A I M +K+ LY AC ++CNKKVV+ N YRCEKC + F WR++LS S+AD TENTWVTCFQE AE IL +A+ELG+ + + E +N+V +A FK Y +L K E +N+E +++ T+ TV PID Y ++++ D+++ Sbjct: 3 PQLTSGAIDRILQGEDVPNAVLQILGCKKIP--GTGNDRYRLLISDGVIGCPFAMLGTQLNHMVTNKELEKFTVVRVDKCVCNQVQPDRKVIILLNLTVLCPSHEVNEKIGNPVNATAANAAQPAPSTGAA----ATNGSAKPSYAKE-----PQHNVSETSMVNG-------------------TAVHPISSLTPYQNKWTIKVRVTNKTPLRTYSNARGEGKLFSMNLLDESGEIKATAFNDAAGKYYDLIEVGKVYYLSKAQLKTADKRYSSLKNEYELTFNNDTTVMPC-EESTSIPSLRFDFVPIAEIEQVEKDTNIDVIGVCKSCTDATTLISKQG-KELVKREVKLVDRSNKEVSLTLWGSDAEKFDGTSNPVIAVKGARVSEFNGRTLSVSMSSSMQINPDIKEAHILKGWFEREGANMEVQSISGKGPSGSMGG---DWKTFAQTASEQLGMGD--KPDYYINKATIVMLRKENCLYMAC----PSQECNKKVVDMNNGVYRCEKCNREYSEFQWRLLLSLSVADFTENTWVTCFQESAEAILGVSAQELGSFKENDEEKFNEVLTEANFKSYVFKLRTKMETFNEESRLKTTVVTVSPIDPVSYTRKILSDIKK 585
BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Match: gi|805780931|ref|XP_012139144.1| (PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform X1 [Megachile rotundata]) HSP 1 Score: 516.538 bits (1329), Expect = 1.255e-173 Identity = 279/631 (44.22%), Postives = 386/631 (61.17%), Query Frame = 0 Query: 16 SLTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSNSNN----RKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYN-GVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEE-AGI 640 SLTEGAL KI G ++KP+LQ+LG KKLA+ SSS +RYR+ VSDG+ NSF+MLATQ+N I L F + + N Y S +N ++V+++L +DV + EV H IG PT +A + PA S P PP +RS + P N +SS D + PI +L+PYQN+W IKARV KSDIR W+NSRGEG LFSMDL+DESGEIR TAF++QCDK+Y+ +EVG++YYI+ TLK ANKQ++ L N+YEMT TE++PC D IP++ FNF I D+ K+ +DV+ I K + LTS+ T +E KRDI LVD S V TLWG+ AE FDG+NNPV+ VK +V ++N G +LS++SS+V+QINPD+P+AH L GW+ + G + S+++ T G G I T E + M +G +G PE Y A I M + + A+YK+C + C KK+++Q ND YRCEKC + + +R++ S S+AD T+N W T F E+AE IL TA+ELG L + + + Y + F DATFK + ++ K E ++DE +++ T V P+DY YN LI ++E AGI Sbjct: 3 SLTEGALDKIMNGIDVEKPILQILGHKKLAS-SSSGERYRLLVSDGKRINSFTMLATQLNSMITDNILTEFSICQINRYAISMVHNAGKQKRVMVILNIDVKVRGNEVGHKIGNPT--------NAESESDSTPA-----SAPAPPQ-QRSDVLMPKQNTHQSSTSD--------------------ISTTPIVALSPYQNRWVIKARVLSKSDIRTWSNSRGEGKLFSMDLVDESGEIRCTAFRDQCDKFYDMLEVGKVYYISRATLKTANKQFNHLKNDYEMTLTGDTEIIPCHDGGNEIPTLQFNFQPISDVETKEKNEYIDVIAIVKSCADLQLLTSRNTGREMKKRDIFLVDQSSTMVCFTLWGKEAEEFDGSNNPVIAVKGARVGEFNGGKNLSSLSSTVIQINPDIPEAHRLHGWFNATGHNEEAKSISR--TFGGGGNISGPWLTFKEAR--EMELGFKG-PEMYMVKATINMIRIENAVYKSC----PSESCKKKLIDQANDMYRCEKCDKEYPNYRYRLLASLSLADWTDNQWATAFSEEAEKILGITAQELGELQENDNDAYLEKFADATFKSFLFKIRVKLETFSDENRLKATCVAVNPLDYKLYNNHLITQIKELAGI 589
BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Match: gi|675381270|gb|KFM74172.1| (Replication protein A DNA-binding subunit, partial [Stegodyphus mimosarum]) HSP 1 Score: 516.153 bits (1328), Expect = 1.916e-173 Identity = 266/624 (42.63%), Postives = 380/624 (60.90%), Query Frame = 0 Query: 15 PSLTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEE 637 P LT GA+ +I G+ + ++Q+LG KK+ Q S +DR+R+ +SDG S +F+ML TQ+N + + L F ++R + +C+ ++KVIILL V VLT EV +G P L P+ T ++ A A P G PA + + VHPI+SLTPYQNKWTIKARVT K+ IR WNNSRGEG LFS++LLDE+GEIRAT F + DK+Y+ +E +++YI+ TLK AN +++++ N+YEM+F + T + PC++ + IP + F+FV I + KDS +DV+G+CK ++ T T++ T KE KRDI+LVD S EV+LTLWG AE FDG+ NP++ VK +VSDYNG SLS SSVLQINPD+ +AH LKGWY+ EG + L S + G +G KT + +N+GMG K +YY + A + M +K+ +Y +C + C KKV++ N YRCEKC + + F WR++LS S+AD TEN WVTCFQE AE IL+ TAEELG+L + + E YN+V DA FK Y +L K E +N+E +++ + T P+D Y K+++ D+++ Sbjct: 3 PKLTSGAINRILNGEDVANAIIQILGCKKI--QGSGNDRFRLLISDGVHSYAFAMLGTQLNHLVANKELEKFTVVRVDKCVCNQVQQDKKVIILLSVTVLTPGSEVGDKLGNPAILGPNATSASAVAASEASNAAKASISNGP---------------------------GRPPAQANLQMNGSSQPVHPISSLTPYQNKWTIKARVTSKTPIRTWNNSRGEGKLFSVNLLDETGEIRATGFNDAVDKFYDLLEPNKVFYISRATLKTANTKFNSVKNDYEMSFNNDTCIQPCEEASSTIPMLQFDFVPIAQIEQVDKDSNIDVIGVCKSASDVLTFTARTTNKELIKRDIRLVDRSNKEVSLTLWGTDAEKFDGSMNPIITVKGARVSDYNGRSLSVTMSSVLQINPDIKEAHMLKGWYDREGCNLE-LESISSKSSAVSGNMGGQWKTFAQAASENLGMGD--KADYYVSKATVVMLRKENCMYMSC----PSEDCKKKVIDMNNGIYRCEKCSREYNEFKWRLLLSISVADFTENQWVTCFQEAAECILSITAEELGSLKESDEERYNEVLTDANFKSYIFKLRTKMETFNEESRLKTAVVTASPVDPISYTKKIMADIKQ 590
BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Match: gi|1124004816|ref|XP_019611086.1| (PREDICTED: replication protein A 70 kDa DNA-binding subunit [Rhinolophus sinicus]) HSP 1 Score: 516.924 bits (1330), Expect = 2.038e-173 Identity = 276/627 (44.02%), Postives = 402/627 (64.11%), Query Frame = 0 Query: 17 LTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPT--PPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEEAGI 640 L+EGA+ I QG T KPVLQV+ + + +S RYR+ +SDG + S MLATQ+N + L++ C+ + N ++ + + R+V+IL+E+DVL V IG P N +G ++ PA +A S PT P SP T ++ + G+ + SGG QA V PI+SLTPYQ+KWTI ARVT+KS IR W+NSRGEG LFS++L+DESGEIRATAF EQ DK++ ++V ++YY + GTLK ANKQY+ + N+YEMTF + T V+PC+DD ++P++ F F I DL + KDS+VD++G+CK EAT +T + +E +KR+I L+DMS V+ TLWG+ A+ FDG+ PV+ +K +VSD+ G SLS +SSS + +NPDMP+A+ L+GW++SEGQ+ +S++ + G GG +N KTL EVK +N+G G K +Y+S+ A + +K+ +Y+AC T D CNKKV++Q N YRCEKC + F +R++LS +IAD EN WVTCFQE AE IL ++A LG L ++N + + ++FQ+A F+ + R+ K E YNDE +++ T+ V P++Y EY KRLI + + Sbjct: 5 LSEGAIAAIMQGDTAIKPVLQVINIRPITT-GTSPPRYRLLMSDGLNTLSSFMLATQLNALVEDEKLSSNCICQINRFIVNTLKDGRRVVILMELDVLKSAEAVGLKIGNPVPYN-----EGHGQQQVIPAPASAVSPPTSKPQQQNGSPGTGSTVSKDYGAAKIFGKAGGTSLVNSSGG---TQAKVVPISSLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNEQVDKFFPLIDVNKVYYFSKGTLKIANKQYTAVKNDYEMTFNNETSVMPCEDDH-HLPTVKFEFTGIDDLESKPKDSLVDIIGVCKSYEEATKITVKSNNREVSKRNIYLMDMSGKVVSATLWGEDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVMVNPDMPEAYKLRGWFDSEGQNLDAVSISDLKSGGLAGG-NTNWKTLYEVKSENLGQGD--KADYFSSVATVVFLRKENCMYQAC-PTQD---CNKKVIDQQNGLYRCEKCDREFPSFKYRMILSVNIADFQENQWVTCFQESAEAILGQSAAYLGELKEKNEQAFEEIFQNANFRSFVFRIRVKLETYNDESRIKATVMDVKPVNYREYGKRLIMSIRRNAV 614
BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Match: gi|115496244|ref|NP_001068644.1| (replication protein A 70 kDa DNA-binding subunit [Bos taurus] >gi|111308484|gb|AAI19987.1| Replication protein A1, 70kDa [Bos taurus] >gi|296476839|tpg|DAA18954.1| TPA: replication protein A1 [Bos taurus]) HSP 1 Score: 516.924 bits (1330), Expect = 2.083e-173 Identity = 269/623 (43.18%), Postives = 398/623 (63.88%), Query Frame = 0 Query: 17 LTEGALLKICQ-GQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPT--PPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDL 635 L+EGA+ I Q G T KP+LQV+ + + +S RYR+ +SDG + S MLATQ+N + L++ C+ + N ++ + + R+V+IL+E++VL V IG P N +G + P +A S PT P SP + ++ + G+ + SGG QA V PIASLTPYQ+KWTI ARVT+KS IR W+NSRGEG LFS++L+DESGEIRATAF EQ DK++ ++V ++YY + GTLK ANKQ++ + N+YEMTF + T V+PC +D ++P++ F+F I DL + +KDS+VD++GICK + T + + +E +KR+I L+DMS VN TLWG A+ FDG+ PV+ +K +VSD+ G SLS +SSS + +NPD+P+A+ L+GW++SEGQ+ +S++ + G GG +N KTL EVK +N+G G KP+Y+S+ A + +K+ +Y+AC T D CNKKV++Q N YRCEKC + F +R++LS +IAD EN WVTCFQE AE IL ++ LG L ++N + + +VFQ+A F+ + R+ K E YNDE +++ T+ V P+DY EY +RL+ ++ Sbjct: 5 LSEGAIAAIMQQGDTSIKPILQVINIRPITT-GNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEERLSSNCICQINRFIVNTLKDGRRVVILMELEVLKSAEAVGSKIGNPVPYN-----EGHGQQPVVPPPVSATSPPTSRPQQQNGSPGMASTASKAFGASKTFGKAGGTSQVNSSGG---TQAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNEQADKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPC-EDGHHLPTVQFDFTGIGDLESKSKDSLVDIIGICKNYEDVTKIIVKSNNREVSKRNIYLMDMSGKVVNATLWGDDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQALDGISISDLKS-GGAGGSNTNWKTLYEVKSENLGQGD--KPDYFSSVATVVYLRKENCMYQAC-PTQD---CNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQSTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVVDVKPVDYREYGRRLVMNI 610
BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Match: gi|1126159814|ref|XP_019621798.1| (PREDICTED: replication protein A 70 kDa DNA-binding subunit-like isoform X2 [Branchiostoma belcheri]) HSP 1 Score: 516.153 bits (1328), Expect = 4.302e-173 Identity = 270/633 (42.65%), Postives = 396/633 (62.56%), Query Frame = 0 Query: 16 SLTEGALLKICQGQTIDKPVLQVLGFKKLANQSS-SSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRP----KSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIG--SNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEEAGI 640 +L EG + +I G + PVLQVLG KK+ + + S+RYR+ +SDG+ + S +MLATQ N + SG L C+IR Y+C+ +NR+V+I+LEV VL P I PT +N A G AP A+ S R P RP + P+ + P + P + PIA L PYQN+WTI+ARVT+K IR W+N+RGEG LFSMDLLDESGEIRATAF +QCDK+Y+ +E+G++Y+I+ G LK ANKQY+++ N+YEM+F + T VV C+D++ ++PSIT+NFV I+ L ++++D++G+CK + TT+T+++T +E KRD+++VDMS +VNLTLWG A+ FDG++ PVV +K ++SD+ G SLS V SS + INPD+P+A L+GWY+ G + S QS + G GG G +N K+ +V +N+G G KP+Y+ST I +K+ A+Y+AC T D CNKKVV+ N + CEKC + F +R++L ++AD + N W TCF EQAE IL + E LG + DQ+ G+++VF +A FK Y + K + YNDE ++R + P+D+ EY+K+LI ++ + + Sbjct: 4 NLNEGTIQEIANGGSPKSPVLQVLGIKKIQSAGAQGSERYRLLLSDGKHTQSSAMLATQQNHLVNSGQLEQHCVIRLEKYICNTIQDNRRVLIMLEVQVLGNP---KIKIKNPTPVN-----QAGGGAPAP-AQNGGSSHAVNGGMNR-PGNQGGAGRPNQGGSGASFYPRSNVAASPGT------PGRGKPTPIAGLNPYQNRWTIRARVTNKGSIRTWSNARGEGKLFSMDLLDESGEIRATAFNDQCDKFYDLIEIGKVYFISKGGLKTANKQYTSIQNDYEMSFNNDTTVVLCEDES-DLPSITYNFVPIEKLEEMNPNTIIDLIGVCKSYGDVTTITTRQTNREVNKRDLQIVDMSGKQVNLTLWGGEADKFDGSSCPVVAIKGARLSDFGGRSLSTVGSSTVMINPDIPEAFQLRGWYDKVGCN----SEAQSISTGAGGGAGRPTNWKSFKQVIDENLGTGE--KPDYFSTKGTIVFMKKESAMYQAC-PTQD---CNKKVVDLQNGFFSCEKCSKEFPNFKYRLILQANVADYSGNQWTTCFSEQAETILEQNTEYLGNMKDQDDTGFDQVFTEANFKSYIFTMRVKMDTYNDESRIRCSCVGAQPVDFKEYSKKLINEIRQMAL 609
BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Match: gi|1242798340|ref|XP_022339609.1| (replication protein A 70 kDa DNA-binding subunit-like [Crassostrea virginica]) HSP 1 Score: 516.153 bits (1328), Expect = 5.354e-173 Identity = 269/630 (42.70%), Postives = 395/630 (62.70%), Query Frame = 0 Query: 12 MSHPSLTEGALLKICQGQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNP---DGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDLEE 637 M++ +L+ GAL I G D+P+LQV+ KK+ Q SS+DRYR+ +SDG+ S S +MLATQ+N + SG L N +I + Y+C+ +R+V+ILL++ V+ + EV IG P GT S + + + PP + ++ S N N K ++ S AS SGG + VH I SLTPYQN+W I+ARVT KS IR W+NSRGEG LFS+ L D+S EIRAT F + DK+Y+ +EV ++Y+ + TLK ANKQY+T+ N+YEMTF T + P DD+ ++P++ FNFVKI +L + A +++VDV+G+ K E +T+ +++QKE TKRD+++VD S VN+TLWG A+ FDG+ NPV+ VK KVSDY G SLSA+++S + NPD+ + H LKGW+E +G + ++ G GG +N K E+K +N+G KPEY++T A + +K+ +Y+AC + CNKKVV+QGN YRCEKC + + WR++LS ++ D ++N WVTCFQE AE +L A+ELG+L D N +++VFQDA FK Y +L K E YNDE +++ ID+ E ++RLI+++++ Sbjct: 1 MTNHNLSSGALESIINGVNFDRPILQVISSKKITAQGSSADRYRLLLSDGEVSYSHAMLATQLNSLMESGELDNLAVISVDKYLCNTIQGDRRVMILLDLHVIQKGTEVGQRIGNPQQYKASAVQGTNSEHNSAQCPPQMPKQEGGGQSFISTVSD-KQVNNNIKKENMNGSSKGNYSIKASNSGGTPGGASRVHKIDSLTPYQNRWKIRARVTQKSGIRTWSNSRGEGKLFSVTLTDDSAEIRATGFNDAVDKFYDLLEVNKVYFFSKATLKTANKQYTTVQNDYEMTFNADTMIEPSDDDS-SLPTMNFNFVKINELDSKAPNTLVDVIGVVKNCGEISTIIGKQSQKEITKRDLQIVDQSGMSVNVTLWGVDAQQFDGSGNPVIAVKGAKVSDYGGRSLSAMATSQIIHNPDLREGHMLKGWFEHDGHNMDFQGY-RNDGPGGGGGGTTNWKCFAEIKSENVGA---DKPEYFTTKATVLFLRKENCMYQAC----PTEACNKKVVDQGNGMYRCEKCAREFPNYKWRMILSANLGDYSDNQWVTCFQESAEAMLGIKADELGSLKDSNEAAFDQVFQDACFKSYVFKLRAKVETYNDESRLKTVTMNASTIDFKEQSQRLIEEIKK 620
BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Match: gi|1334042946|ref|XP_004635527.2| (replication protein A 70 kDa DNA-binding subunit [Octodon degus]) HSP 1 Score: 514.998 bits (1325), Expect = 1.155e-172 Identity = 274/627 (43.70%), Postives = 398/627 (63.48%), Query Frame = 0 Query: 17 LTEGALLKICQ-GQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFDPM------QATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDL 635 L+EGA+ I Q G T KP+LQV+ + + +S RYR+ +SDG + S MLATQMN + + LA+ C+ + + ++ + + RKV+IL++V+VL V IG P N G +A P+ AA S PTP ++ +S G+ PK S + GG P+ Q+ V PI SLTPYQ+KWTI ARVT+KS IR W+NSRGEG LFS++L+DESGEIRATAF +Q DK++ +EV ++YY T GTLK ANKQ+S + N+YEMTF T VVPC+DD ++P++ F+F+ I DL +KDS+VD++GICK +AT +T + +E KR+I L+D S V TLWG+ A+ FDG+ PV+ +K +VSD+ G SLS +SSS + +NPD+P+A+ L+GW+++EGQ+ +S++ + G GG +N KTL EVK +N+G G K +Y+S+ A + +K+ +Y+AC T D CNKKV++Q N YRCEKC + F +R++LS +IAD EN WVTCFQE AE IL + LG L ++N + + +VFQ A F+ + ++ K E YNDE +++ T+ V P+DY +Y +RLI ++ Sbjct: 5 LSEGAIAAIMQQGDTSIKPILQVVSIRPITT-GNSPPRYRLLMSDGINTLSSFMLATQMNSLVETEQLASNCICQVHRFIVNTLKDGRKVVILMDVEVLKSASTVGVKIGNPLPYN-----EGQGQPQALPSPVAAAS-PTPGRPQQQNGSSGAGSAA------PKAYGASKTFGKPGGPGPLHPSGGTQSKVVPIVSLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNDQVDKFFPLIEVNKVYYFTKGTLKIANKQFSAVKNDYEMTFNSETSVVPCEDDH-HLPTVQFDFIGIDDLEKKSKDSLVDIIGICKSYEDATKITVKSNNREVAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIMNPDIPEAYKLRGWFDAEGQTLDGVSISDLKS-GGLGGSNTNWKTLYEVKSENLGQGD--KADYFSSVATVVYLRKENCMYQAC-PTQD---CNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQWVTCFQESAEAILGQNTAYLGELKEKNEQAFEEVFQHANFRSFTFKIRVKLETYNDESRIKATVMDVKPVDYRDYGRRLITNI 610
BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Match: gi|641713660|ref|XP_008146110.1| (PREDICTED: replication protein A 70 kDa DNA-binding subunit [Eptesicus fuscus]) HSP 1 Score: 513.842 bits (1322), Expect = 3.807e-172 Identity = 270/627 (43.06%), Postives = 402/627 (64.11%), Query Frame = 0 Query: 17 LTEGALLKICQ-GQTIDKPVLQVLGFKKLANQSSSSDRYRVFVSDGQFSNSFSMLATQMNEKILSGSLANFCLIRANNYMCSN-SNNRKVIILLEVDVLTQPGEVSHTIGEPTTLNPDGTVSANGAKKAPPAKRAADSDPTPPMAKRSPLTSPNGNRPKSSILDPKPVYGSHPASESGGFD------PMQATVHPIASLTPYQNKWTIKARVTHKSDIRRWNNSRGEGHLFSMDLLDESGEIRATAFKEQCDKYYNTVEVGQLYYITAGTLKAANKQYSTLNNEYEMTFRDSTEVVPCKDDAPNIPSITFNFVKIKDLANAAKDSVVDVMGICKETNEATTLTSQRTQKEFTKRDIKLVDMSCNEVNLTLWGQTAETFDGANNPVVVVKNCKVSDYNGVSLSAVSSSVLQINPDMPQAHALKGWYESEGQSASMLSLTQSGTRGNDGGIGSNLKTLGEVKIQNMGMGSEGKPEYYSTSAYIAMFQKDRALYKACNRTNDGKQCNKKVVEQGNDQYRCEKCGMDLDGFAWRIVLSFSIADSTENTWVTCFQEQAELILNKTAEELGALHDQNPEGYNKVFQDATFKHYDMRLSCKSEYYNDEQKVRHTLRTVVPIDYHEYNKRLIKDL 635 L+EGA+ I Q G T KP+LQV+ + + +S RYR+ +SDG + S MLATQ+N + L++ C+ + N ++ + + R+V+IL+E++VL V IG P N +G ++ P+ +A S PP +K P NG+ S + PK + ++GG QA V PIASLTPYQ+KWTI ARVT+KS IR W+NSRGEG LFS++L+DESGEIRATAF EQ DK++ ++V ++YY T GTLK ANKQ+S + N+YEMTF + T VVPC +D N+P++ F+F KI DL + KDS++D++GICK +A +T + +E +KR+I L+DMS V+ TLWG+ A+ FDG+ PV+ +K +VSD+ G SLS +SSS + +NPD+P+A+ L+GW++SEGQ+ +S++ G G +N KTL EVK +N+G G K +Y+S+ A + +K+ ++Y+AC + CNKKV++Q N YRCEKC + F +R++LS +IAD EN WVTCFQE AE IL ++ LG L ++N + + ++FQ+A F+ + ++ K E YNDE +++ T+ V P+DY EY++RLI ++ Sbjct: 5 LSEGAIAAIMQQGDTSIKPILQVISIRPITT-GNSPPRYRLLMSDGVNTLSSFMLATQLNPLVEEEKLSSNCICQINRFIVNTLKDGRRVVILMELEVLKSAEAVGAKIGNPLPYN-----EGHGQQQVVPSPVSATS---PPSSKPQP---QNGSSGMGSTV-PKAYGAAKIFGKTGGTSLGNSSGGSQAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNEQVDKFFPLIDVNKVYYFTKGTLKIANKQFSAVKNDYEMTFNNETSVVPC-EDGHNLPTVQFDFTKIDDLESKPKDSLIDIIGICKSYEDAIKITVKSNNREVSKRNIYLMDMSGKVVSATLWGEDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIILNPDIPEAYKLRGWFDSEGQALDGVSISDL-KGGGAAGSNTNWKTLYEVKSENLGHGD--KADYFSSVATVVYLRKENSMYQACPTPD----CNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIADYQENQWVTCFQESAEAILGQSTAYLGELKEKNEQAFEEIFQNANFRSFVFKIRVKLETYNDESRIKATVMDVKPVDYREYSRRLIMNI 610 The following BLAST results are available for this feature:
BLAST of replication protein a 70 kda dna-binding subunit vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of replication protein a 70 kda dna-binding subunit vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 21
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BLAST of replication protein a 70 kda dna-binding subunit vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold11_size778918:680613..683751- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold11_size778918-snap-gene-6.54 ID=maker-scaffold11_size778918-snap-gene-6.54|Name=replication protein a 70 kda dna-binding subunit|organism=Tigriopus kingsejongensis|type=gene|length=3139bp|location=Sequence derived from alignment at scaffold11_size778918:680613..683751- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'replication protein a 70 kda dna-binding subunit' has the following synonyms
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