60s ribosomal protein l18a, maker-scaffold1207_size55689-snap-gene-0.13 (gene) Tigriopus kingsejongensis

Overview
Name60s ribosomal protein l18a
Unique Namemaker-scaffold1207_size55689-snap-gene-0.13
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of 60s ribosomal protein l18a vs. L. salmonis genes
Match: EMLSAG00000009463 (supercontig:LSalAtl2s:LSalAtl2s60:129351:130208:-1 gene:EMLSAG00000009463 transcript:EMLSAT00000009463 description:"maker-LSalAtl2s60-augustus-gene-1.19")

HSP 1 Score: 300.056 bits (767), Expect = 5.267e-106
Identity = 140/175 (80.00%), Postives = 158/175 (90.29%), Query Frame = 0 
Query:    1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGSMFKAKRPDTYF 175
            MRA G LKEY VIGRKLPT +E  T LYRM+IFAPD VVAKSRFWYFLRQLRKFKKTTGEIVSV+ I E++PL++KNFGIWLRYDSRSGTHNMYREYRDL VS A+TQCYRDMGARHRARAH+IQII+VEPV +S  RRP+V+QMHDSKI+FPL SRVQK GGS+FKA+RP+TY+
Sbjct:    1 MRAKGNLKEYCVIGRKLPTEKEQVTSLYRMRIFAPDDVVAKSRFWYFLRQLRKFKKTTGEIVSVKLIKEKRPLRVKNFGIWLRYDSRSGTHNMYREYRDLNVSDAVTQCYRDMGARHRARAHSIQIIKVEPVHSSVCRRPLVKQMHDSKIRFPLPSRVQKSGGSLFKARRPNTYY 175
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BLAST of 60s ribosomal protein l18a vs. SwissProt
Match: gi|730537|sp|P41093.1|RL18A_DROME (RecName: Full=60S ribosomal protein L18a)

HSP 1 Score: 281.182 bits (718), Expect = 5.042e-97
Identity = 128/177 (72.32%), Postives = 152/177 (85.88%), Query Frame = 0 
Query:    1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGG-SMFKAKRPDTYFQ 176
            MRA G LKEY V+GRKLP+ +EP+TPLY+M+IFAPD +VAKSRFWYFLRQL+KFKKTTGEIVS++++ E  P+KIKNFGIWLRYDSRSGTHNMYREYRDLTV  A+TQCYRDMGARHRARAH+IQII+V+ + A+KTRR  V+Q HDSKIKFPL  RV  +G   +F  ++P TYFQ
Sbjct:    1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYFQ 177
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BLAST of 60s ribosomal protein l18a vs. SwissProt
Match: gi|21362850|sp|Q8WQI7.1|RL18A_SPOFR (RecName: Full=60S ribosomal protein L18a)

HSP 1 Score: 265.388 bits (677), Expect = 8.312e-91
Identity = 124/176 (70.45%), Postives = 146/176 (82.95%), Query Frame = 0 
Query:    1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRV-QKRGGSMFKAKRPDTYF 175
            M+A G LKEY VIGRKLP+  EP+ PLY+M+IF+PDQ+VAKSRFWYFLRQL+KFKKTTGEIVS+ EI E+ P+KIKNFGIWLRY+SRSG HNMYREYRDL+V  A+TQCYRDMGARHRARAH+IQII+VE + AS  RRP V+Q H+S I+FPL  RV   +  + F  KRP TYF
Sbjct:    1 MKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDQIVAKSRFWYFLRQLKKFKKTTGEIVSIREIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKASACRRPQVKQFHNSTIRFPLPKRVHHHKRLNTFAYKRPSTYF 176
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BLAST of 60s ribosomal protein l18a vs. SwissProt
Match: gi|71153110|sp|Q7ZWJ4.1|RL18A_DANRE (RecName: Full=60S ribosomal protein L18a)

HSP 1 Score: 263.462 bits (672), Expect = 4.795e-90
Identity = 121/176 (68.75%), Postives = 145/176 (82.39%), Query Frame = 0 
Query:    1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGS-MFKAKRPDTYF 175
            M+ASGTL+EY+V+GR LP+ + P  PLYRM+IFAP+ VVAKSRFWYF+ QLRK KK +GEIV    + E+ PLK+KNFGIWLRYDSRSGTHNMYREYRDLT S A+TQCYRDMGARHRARAHAIQI++V+ +AA+K RRP ++Q HDSKIKFPL  RV +R     F  KRP+T+F
Sbjct:    1 MKASGTLREYKVVGRLLPSVKNPAPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKASGEIVYCGLVFEKSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAVTQCYRDMGARHRARAHAIQIMKVQVIAANKCRRPAIKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
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BLAST of 60s ribosomal protein l18a vs. SwissProt
Match: gi|730538|sp|Q02543.2|RL18A_HUMAN (RecName: Full=60S ribosomal protein L18a; AltName: Full=Large ribosomal subunit protein eL20 >gi|108860928|sp|Q3T003.1|RL18A_BOVIN RecName: Full=60S ribosomal protein L18a)

HSP 1 Score: 260.766 bits (665), Expect = 6.094e-89
Identity = 120/176 (68.18%), Postives = 146/176 (82.95%), Query Frame = 0 
Query:    1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGS-MFKAKRPDTYF 175
            M+ASGTL+EY+V+GR LPT +    PLYRM+IFAP+ VVAKSRFWYF+ QL+K KK++GEIV   ++ E+ PL++KNFGIWLRYDSRSGTHNMYREYRDLT + A+TQCYRDMGARHRARAH+IQI++VE +AASK RRP V+Q HDSKIKFPL  RV +R     F  KRP+T+F
Sbjct:    1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
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BLAST of 60s ribosomal protein l18a vs. SwissProt
Match: gi|50403587|sp|P62718.1|RL18A_RAT (RecName: Full=60S ribosomal protein L18a >gi|50403588|sp|P62717.1|RL18A_MOUSE RecName: Full=60S ribosomal protein L18a)

HSP 1 Score: 258.84 bits (660), Expect = 3.519e-88
Identity = 119/176 (67.61%), Postives = 145/176 (82.39%), Query Frame = 0 
Query:    1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGS-MFKAKRPDTYF 175
            M+ASGTL+EY+V+GR LPT +    PLYRM+IFAP+ VVAKSRFWYF+ QL+K KK++GEIV   ++ E+ PL++KNFGIWLRYDSRSGTHNMYREYRDLT + A+TQCYRDMGARHRARAH+IQI++VE +AA K RRP V+Q HDSKIKFPL  RV +R     F  KRP+T+F
Sbjct:    1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
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BLAST of 60s ribosomal protein l18a vs. SwissProt
Match: gi|21362864|sp|Q90YU9.1|RL18A_ICTPU (RecName: Full=60S ribosomal protein L18a)

HSP 1 Score: 258.07 bits (658), Expect = 6.499e-88
Identity = 120/176 (68.18%), Postives = 142/176 (80.68%), Query Frame = 0 
Query:    1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGS-MFKAKRPDTYF 175
            M+ASGTL+EY+V+GR LP+A+ P  PLYRM+IFAP+ VVAKSRFWYF+ QLRK KK  GE V    + EQ PLK+KNFGIWLRYDSRSGTHNMYREYRDLT S A+TQCYRDMGARHRARAHAIQI++V+ +AA+K RR  ++Q HDSKIKFPL  RV +R     F  +RP T+F
Sbjct:    1 MKASGTLREYKVVGRLLPSAKNPTPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKANGETVYCGLVHEQSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAVTQCYRDMGARHRARAHAIQIMKVQVIAANKCRRAAIKQFHDSKIKFPLPHRVLRRQHKPRFTTRRPQTFF 176
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BLAST of 60s ribosomal protein l18a vs. SwissProt
Match: gi|3914712|sp|O57561.1|RL18A_SALSA (RecName: Full=60S ribosomal protein L18a)

HSP 1 Score: 256.144 bits (653), Expect = 3.047e-87
Identity = 117/176 (66.48%), Postives = 142/176 (80.68%), Query Frame = 0 
Query:    1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKR-GGSMFKAKRPDTYF 175
            M+ASGTL+EY+V+GR LP+ + P  PLYRM+IFAP+ VVAKSRFWYF+ QLRK KK  GE V    + E+ PLK+KNFG+WLR DSRSGTHNMYREYRDLT SAA+TQCYRDMGARHRARAH+I I++V+ +AA+K RRP ++Q HDSKIKFPL  RV +R     F  KRP+T+F
Sbjct:    1 MKASGTLREYKVVGRLLPSVKNPTPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKANGETVYCGLVHEKTPLKVKNFGVWLRNDSRSGTHNMYREYRDLTTSAAVTQCYRDMGARHRARAHSIHIMKVQEIAANKCRRPAIKQFHDSKIKFPLPHRVLRRQHNPRFTTKRPNTFF 176
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BLAST of 60s ribosomal protein l18a vs. SwissProt
Match: gi|21362847|sp|O44480.2|RL18A_CAEEL (RecName: Full=60S ribosomal protein L18a)

HSP 1 Score: 218.779 bits (556), Expect = 2.646e-72
Identity = 96/171 (56.14%), Postives = 132/171 (77.19%), Query Frame = 0 
Query:    6 TLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGG-SMFKAKRPDTYF 175
            TL EY V+GRK+PT +EP TP+++M+IFA + V+AKSRFWYF+  LR+ KK  GEI+S++++ E+ P  +KN+G+WL+YDSR+G HNMYREYRD TV+ A+TQCYRDMGARHRA+A  I I++V+ V A  T+R  ++  HD+KI+FPL  RV KR   S+F   R +T+F
Sbjct:    9 TLNEYVVVGRKIPTEKEPVTPIWKMQIFATNHVIAKSRFWYFVSMLRRVKKANGEILSIKQVFEKNPGTVKNYGVWLKYDSRTGHHNMYREYRDTTVAGAVTQCYRDMGARHRAQADRIHILKVQTVKAEDTKRAGIKMFHDAKIRFPLPHRVTKRKNLSVFTTARQNTHF 179
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BLAST of 60s ribosomal protein l18a vs. SwissProt
Match: gi|172046827|sp|Q54MK8.2|RL18A_DICDI (RecName: Full=60S ribosomal protein L18a)

HSP 1 Score: 199.134 bits (505), Expect = 8.411e-65
Identity = 91/169 (53.85%), Postives = 125/169 (73.96%), Query Frame = 0 
Query:    7 LKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGSMFKAKRPDTYF 175
            + E++V+GR +PT  +    +YRM++FA   + AKSRFWYFL ++ K KK+TGEI++V EI E KP K+KNFG+++RY+SRSGTHN+Y+EYRDLT   A++Q Y +M +RH AR  +I II ++ +AAS TRR   +Q HDSKIKFPLT R+ K   S F A RP+T+F
Sbjct:    3 IHEFQVVGRHVPTERDANPKIYRMRLFAQTSIHAKSRFWYFLSKIVKMKKSTGEILNVTEIFEDKPQKVKNFGVFIRYNSRSGTHNIYKEYRDLTRCGAVSQMYDEMASRHSARESSIHIIDIKEIAASLTRRANTKQFHDSKIKFPLTHRIAK-SKSTFVANRPNTFF 170
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BLAST of 60s ribosomal protein l18a vs. SwissProt
Match: gi|338819281|sp|P0CX23.1|RL20A_YEAST (RecName: Full=60S ribosomal protein L20-A; AltName: Full=L18a; AltName: Full=Large ribosomal subunit protein eL20-A >gi|338819289|sp|P0CX24.1|RL20B_YEAST RecName: Full=60S ribosomal protein L20-B; AltName: Full=L18a; AltName: Full=Large ribosomal subunit protein eL20-B)

HSP 1 Score: 189.119 bits (479), Expect = 8.547e-61
Identity = 90/170 (52.94%), Postives = 121/170 (71.18%), Query Frame = 0 
Query:    7 LKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVA-ASKTRRPIVQQMHDSKIKFPLTSRVQKRGGSMFKAKRPDTYF 175
             KEY+VIGR+LPT   PE  L+RM+IFA ++V+AKSR+WYFL++L K KK +GEIVS+ +I E  P K+KNFG+W+RYDSRSGTHNMY+E RD++  AA+   Y+DM ARHRAR  +I I++V  +   +  +R  V+Q     +KFPL  RVQK     F  KRP T++
Sbjct:    4 FKEYQVIGRRLPTESVPEPKLFRMRIFASNEVIAKSRYWYFLQKLHKVKKASGEIVSINQINEAHPTKVKNFGVWVRYDSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFRSIHILKVAEIEKTADVKRQYVKQFLTKDLKFPLPHRVQK-STKTFSYKRPSTFY 172
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BLAST of 60s ribosomal protein l18a vs. nr
Match: gi|1325321570|ref|XP_023342598.1| (60S ribosomal protein L18a-like [Eurytemora affinis])

HSP 1 Score: 308.916 bits (790), Expect = 1.591e-105
Identity = 147/176 (83.52%), Postives = 156/176 (88.64%), Query Frame = 0 
Query:    1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGSMFKAKRPDTYFQ 176
            M+A GTLKEY VIGRKLPT  EP TPLYRM+IFA D VVA+SRFWYFLRQLRKFKKTTGEIVSVEEI E+ PLKIKNFGIWLRYDSRSGTHNMYREYRDLTV+ AITQCYRDMGARHRARAHAIQIIR EPVAA K RRP+V Q HDSKIKFPL  RVQK+GG+M +A RP TYFQ
Sbjct:    1 MKAKGTLKEYTVIGRKLPTEAEPVTPLYRMRIFATDPVVARSRFWYFLRQLRKFKKTTGEIVSVEEIREKNPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVNGAITQCYRDMGARHRARAHAIQIIRCEPVAAGKCRRPLVTQTHDSKIKFPLPRRVQKQGGAMVQANRPSTYFQ 176
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BLAST of 60s ribosomal protein l18a vs. nr
Match: gi|1325257850|ref|XP_023324577.1| (60S ribosomal protein L18a-like [Eurytemora affinis])

HSP 1 Score: 308.145 bits (788), Expect = 3.140e-105
Identity = 147/176 (83.52%), Postives = 156/176 (88.64%), Query Frame = 0 
Query:    1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGSMFKAKRPDTYFQ 176
            M+A GTLKEY VIGRKLPT  EP TPLYRM+IFA D VVA+SRFWYFLRQLRKFKKTTGEIVSVEEI E+ PLKIKNFGIWLRYDSRSGTHNMYREYRDLTV+ AITQCYRDMGARHRARAHAIQIIR EPVAA K RRP+V Q HDSKIKFPL  RVQK+GG+M +A RP TYFQ
Sbjct:    7 MKAKGTLKEYTVIGRKLPTEVEPVTPLYRMRIFATDPVVARSRFWYFLRQLRKFKKTTGEIVSVEEIREKNPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVNGAITQCYRDMGARHRARAHAIQIIRCEPVAAGKCRRPLVTQTHDSKIKFPLPRRVQKQGGAMVQANRPSTYFQ 182
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BLAST of 60s ribosomal protein l18a vs. nr
Match: gi|225717860|gb|ACO14776.1| (60S ribosomal protein L18a [Caligus clemensi])

HSP 1 Score: 307.375 bits (786), Expect = 5.202e-105
Identity = 144/175 (82.29%), Postives = 160/175 (91.43%), Query Frame = 0 
Query:    1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGSMFKAKRPDTYF 175
            MRA GTLKEY VIGRKLPT +E  TPLYRM+IFAPD VVAKSRFWYFLRQLRKFKKTTGEIVSV+ I E+KPLK+KNFGIWLRYDSRSGTHNMYREYRDL VS A+TQCYRDMGARHRARAH+IQII+VEPV+++  RRP+V+QMHDSKI+FPL SRVQK GGS+FKA RP+TYF
Sbjct:    1 MRAKGTLKEYCVIGRKLPTEKESVTPLYRMRIFAPDVVVAKSRFWYFLRQLRKFKKTTGEIVSVQLIREKKPLKVKNFGIWLRYDSRSGTHNMYREYRDLNVSDAVTQCYRDMGARHRARAHSIQIIKVEPVSSTVCRRPLVKQMHDSKIRFPLPSRVQKSGGSLFKAHRPNTYF 175
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BLAST of 60s ribosomal protein l18a vs. nr
Match: gi|961376226|gb|ALS04857.1| (60S ribosomal protein L18a [Pseudodiaptomus poplesia] >gi|961376316|gb|ALS04902.1| 60S ribosomal protein L18a [Pseudodiaptomus poplesia])

HSP 1 Score: 304.679 bits (779), Expect = 6.482e-104
Identity = 143/176 (81.25%), Postives = 156/176 (88.64%), Query Frame = 0 
Query:    1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGSMFKAKRPDTYFQ 176
            M+A+GTLKEYRVIGRKLPT  EP TPLY+M+IFA D VVAKSRFWYFLRQLRKFKKTTGEIVSVEEI E+ PLK+KNFGIWLRYDSRSGTHNMYREYRD+TV+ AITQCYRDMGARHRARAH+IQIIR E VAASK RRP++ Q HDSKIKFPL  RVQ+  GS+ KA RP TYFQ
Sbjct:    1 MKANGTLKEYRVIGRKLPTEAEPVTPLYKMRIFATDPVVAKSRFWYFLRQLRKFKKTTGEIVSVEEIREKNPLKVKNFGIWLRYDSRSGTHNMYREYRDMTVNGAITQCYRDMGARHRARAHSIQIIRCETVAASKCRRPLIVQTHDSKIKFPLAKRVQRPSGSLVKANRPSTYFQ 176
[Close]
BLAST of 60s ribosomal protein l18a vs. nr
Match: gi|961376588|gb|ALS05038.1| (60S ribosomal protein L18a [Centropages dorsispinatus])

HSP 1 Score: 303.138 bits (775), Expect = 2.881e-103
Identity = 144/176 (81.82%), Postives = 154/176 (87.50%), Query Frame = 0 
Query:    1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGSMFKAKRPDTYFQ 176
            M+A GTLKEY VIGRKLPT  EP TPLY+M+IFA D VVAKSRFWYFLRQLRKFKKTTGEIVSVEE+ E+ PLKIKNFGIWLRYDSRSGTHNMYREYRDLTV+ AITQCYRDMGARHRARAHAIQIIR EPVAA K RRP+V Q HDSKIKFPL  RV K GG + +A RP+TYFQ
Sbjct:    1 MKAKGTLKEYTVIGRKLPTEAEPVTPLYKMRIFATDPVVAKSRFWYFLRQLRKFKKTTGEIVSVEEVKEKNPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVNGAITQCYRDMGARHRARAHAIQIIRCEPVAAGKCRRPLVTQPHDSKIKFPLPRRVMKPGGGLVQANRPNTYFQ 176
[Close]
BLAST of 60s ribosomal protein l18a vs. nr
Match: gi|1148368809|gb|AQS22647.1| (60S ribosomal protein L18a [Pseudodiaptomus poplesia])

HSP 1 Score: 302.368 bits (773), Expect = 5.442e-103
Identity = 142/176 (80.68%), Postives = 156/176 (88.64%), Query Frame = 0 
Query:    1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGSMFKAKRPDTYFQ 176
            M+A+GTLKEYRVIGRKLPT  EP TPLY+M+IFA D VVAKSRFWYFLRQLRKFKKTTGEIVSVEEI E+ PLK+KNFGIWLRYDSRSGTHNMYREYRD+TV+ AITQCYRD+GARHRARAH+IQIIR E VAASK RRP++ Q HDSKIKFPL  RVQ+  GS+ KA RP TYFQ
Sbjct:    1 MKANGTLKEYRVIGRKLPTEAEPVTPLYKMRIFATDPVVAKSRFWYFLRQLRKFKKTTGEIVSVEEIREKNPLKVKNFGIWLRYDSRSGTHNMYREYRDMTVNGAITQCYRDLGARHRARAHSIQIIRCETVAASKCRRPLIVQTHDSKIKFPLAKRVQRPSGSLVKANRPPTYFQ 176
[Close]
BLAST of 60s ribosomal protein l18a vs. nr
Match: gi|290562738|gb|ADD38764.1| (60S ribosomal protein L18a [Lepeophtheirus salmonis])

HSP 1 Score: 297.36 bits (760), Expect = 5.213e-101
Identity = 138/175 (78.86%), Postives = 157/175 (89.71%), Query Frame = 0 
Query:    1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGSMFKAKRPDTYF 175
            MRA G LKEY VIGRKLPT +E  T LYRM+IFAPD VVA SRFWYFLRQLRKFKKTTGEIVSV+ I E++PL++KNFGIWLRYDSRSGTHNMYREYRDL VS A+TQCYRDMGARHRARAH+IQII+VEP+ +S  RRP+V+QMHDSKI+FPL SRVQK GGS+FKA+RP+TY+
Sbjct:    1 MRAKGNLKEYCVIGRKLPTEKEQVTSLYRMRIFAPDDVVATSRFWYFLRQLRKFKKTTGEIVSVKLIKEKRPLRVKNFGIWLRYDSRSGTHNMYREYRDLNVSDAVTQCYRDMGARHRARAHSIQIIKVEPIHSSVCRRPLVKQMHDSKIRFPLPSRVQKSGGSLFKARRPNTYY 175
[Close]
BLAST of 60s ribosomal protein l18a vs. nr
Match: gi|961375446|gb|ALS04467.1| (60S ribosomal protein L18a [Acartia pacifica])

HSP 1 Score: 296.204 bits (757), Expect = 1.430e-100
Identity = 138/176 (78.41%), Postives = 154/176 (87.50%), Query Frame = 0 
Query:    1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGSMFKAKRPDTYFQ 176
            M+A GTLKEY VIGRKLPT  EP TPLY+M+IFA D VVA+SRFWYFLRQLRKFKKTTGEIVS EE+ E+ PLK+KNFGIWLRY+SRSGTHNMYREYRDLT++ AITQCYRDMGARHRARAH+IQIIR E VAA+K RRP+V QMHDSKIKFPL  RVQK  G M +A RP+T+FQ
Sbjct:    1 MKAKGTLKEYTVIGRKLPTETEPVTPLYKMRIFATDPVVARSRFWYFLRQLRKFKKTTGEIVSCEEVREKYPLKVKNFGIWLRYNSRSGTHNMYREYRDLTLNGAITQCYRDMGARHRARAHSIQIIRCEKVAANKCRRPLVTQMHDSKIKFPLPCRVQKTEGQMIQANRPNTFFQ 176
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BLAST of 60s ribosomal protein l18a vs. nr
Match: gi|125808079|ref|XP_001360626.1| (uncharacterized protein Dpse_GA19650 [Drosophila pseudoobscura pseudoobscura] >gi|195150529|ref|XP_002016203.1| GL10622 [Drosophila persimilis] >gi|1036945370|ref|XP_017146142.1| PREDICTED: 60S ribosomal protein L18a [Drosophila miranda] >gi|1037036137|ref|XP_017125437.1| PREDICTED: 60S ribosomal protein L18a [Drosophila elegans] >gi|1236495726|ref|XP_022225805.1| 60S ribosomal protein L18a [Drosophila obscura] >gi|54635798|gb|EAL25201.1| uncharacterized protein Dpse_GA19650 [Drosophila pseudoobscura pseudoobscura] >gi|194110050|gb|EDW32093.1| GL10622 [Drosophila persimilis])

HSP 1 Score: 285.034 bits (728), Expect = 3.718e-96
Identity = 130/177 (73.45%), Postives = 153/177 (86.44%), Query Frame = 0 
Query:    1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGG-SMFKAKRPDTYFQ 176
            MRA G LKEY V+GRKLP+ +EP+TPLY+M+IFAPD +VAKSRFWYFLRQL+KFKKTTGEIVS++++ E  P+KIKNFGIWLRYDSRSGTHNMYREYRDLTV  A+TQCYRDMGARHRARAH+IQII+VE +AA+KTRR  V+Q HDSKIKFPL  RV  +G   +F  ++P TYFQ
Sbjct:    1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPIKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVESIAAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYFQ 177
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BLAST of 60s ribosomal protein l18a vs. nr
Match: gi|1036828331|ref|XP_016976516.1| (PREDICTED: 60S ribosomal protein L18a [Drosophila rhopaloa])

HSP 1 Score: 285.034 bits (728), Expect = 4.431e-96
Identity = 130/177 (73.45%), Postives = 153/177 (86.44%), Query Frame = 0 
Query:    1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGG-SMFKAKRPDTYFQ 176
            MRA G LKEY V+GRKLP+ +EP+TPLY+M+IFAPD +VAKSRFWYFLRQL+KFKKTTGEIVS++++ E  P+KIKNFGIWLRYDSRSGTHNMYREYRDLTV  A+TQCYRDMGARHRARAH+IQII+VE +AA+KTRR  V+Q HDSKIKFPL  RV  +G   +F  ++P TYFQ
Sbjct:    1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVESIAAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYFQ 177
The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l18a vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000094635.267e-10680.00supercontig:LSalAtl2s:LSalAtl2s60:129351:130208:-1... [more]
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BLAST of 60s ribosomal protein l18a vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
gi|730537|sp|P41093.1|RL18A_DROME5.042e-9772.32RecName: Full=60S ribosomal protein L18a[more]
gi|21362850|sp|Q8WQI7.1|RL18A_SPOFR8.312e-9170.45RecName: Full=60S ribosomal protein L18a[more]
gi|71153110|sp|Q7ZWJ4.1|RL18A_DANRE4.795e-9068.75RecName: Full=60S ribosomal protein L18a[more]
gi|730538|sp|Q02543.2|RL18A_HUMAN6.094e-8968.18RecName: Full=60S ribosomal protein L18a; AltName:... [more]
gi|50403587|sp|P62718.1|RL18A_RAT3.519e-8867.61RecName: Full=60S ribosomal protein L18a >gi|50403... [more]
gi|21362864|sp|Q90YU9.1|RL18A_ICTPU6.499e-8868.18RecName: Full=60S ribosomal protein L18a[more]
gi|3914712|sp|O57561.1|RL18A_SALSA3.047e-8766.48RecName: Full=60S ribosomal protein L18a[more]
gi|21362847|sp|O44480.2|RL18A_CAEEL2.646e-7256.14RecName: Full=60S ribosomal protein L18a[more]
gi|172046827|sp|Q54MK8.2|RL18A_DICDI8.411e-6553.85RecName: Full=60S ribosomal protein L18a[more]
gi|338819281|sp|P0CX23.1|RL20A_YEAST8.547e-6152.94RecName: Full=60S ribosomal protein L20-A; AltName... [more]

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BLAST of 60s ribosomal protein l18a vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325321570|ref|XP_023342598.1|1.591e-10583.5260S ribosomal protein L18a-like [Eurytemora affini... [more]
gi|1325257850|ref|XP_023324577.1|3.140e-10583.5260S ribosomal protein L18a-like [Eurytemora affini... [more]
gi|225717860|gb|ACO14776.1|5.202e-10582.2960S ribosomal protein L18a [Caligus clemensi][more]
gi|961376226|gb|ALS04857.1|6.482e-10481.2560S ribosomal protein L18a [Pseudodiaptomus poples... [more]
gi|961376588|gb|ALS05038.1|2.881e-10381.8260S ribosomal protein L18a [Centropages dorsispina... [more]
gi|1148368809|gb|AQS22647.1|5.442e-10380.6860S ribosomal protein L18a [Pseudodiaptomus poples... [more]
gi|290562738|gb|ADD38764.1|5.213e-10178.8660S ribosomal protein L18a [Lepeophtheirus salmoni... [more]
gi|961375446|gb|ALS04467.1|1.430e-10078.4160S ribosomal protein L18a [Acartia pacifica][more]
gi|125808079|ref|XP_001360626.1|3.718e-9673.45uncharacterized protein Dpse_GA19650 [Drosophila p... [more]
gi|1036828331|ref|XP_016976516.1|4.431e-9673.45PREDICTED: 60S ribosomal protein L18a [Drosophila ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1207_size55689supercontigscaffold1207_size55689:25529..26973 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1207_size55689-snap-gene-0.13-mRNA-1maker-scaffold1207_size55689-snap-gene-0.13-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1207_size55689:25529..26973+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1207_size55689-snap-gene-0.13 ID=maker-scaffold1207_size55689-snap-gene-0.13|Name=60s ribosomal protein l18a|organism=Tigriopus kingsejongensis|type=gene|length=1445bp|location=Sequence derived from alignment at scaffold1207_size55689:25529..26973+ (Tigriopus kingsejongensis)
TGAGCGAGTCAGCTGATGCTTTGTGGTGCTTGAGCTGAACTTCTTCCTTT
TCCGCCTTGCGTTTCACGGAGTGACATCCATTCCTTGTGAGACTTTGTGA
ACTCGGCCAATATGCGTGCCTCCGGGACTTTGAAGGAATACCGGGTCATC
GGTCGGAAGCTGCCGACGGCCGAAGAGCCCGAGACACCGCTTTACCGCAT
GAAGATCTTCGCCCCCGACCAGGTTGTGGCAAAGTCCAGGTTCTGGTATT
TCTTACGCCAACTCCGCAAGTTCAAGAAGACCACCGGCGAGATCGTCTCC
GTCGAGGAGATCCTGGAACAGAAGCCCCTGAAGATCAAGAACTTCGGCAT
CTGGCTCAGGTGAGACACTGGATGACCCCTGGGGACTAGTTGAACTTGTG
GCCTCATCTTCAGTTGATGTGAGATTCCCTTGCGTTCGCCATAAGGTCGT
GGGTAGTTATGACAACTGACCCCCTACTACCCGACCTTTGGTGGGCGGGG
GTGATTGATTTGGAATCCACGATGACCTAGTGTAGTTGTACTGTAGTAGC
GATTCCTACTTTTGTGTATATACGTTCAATACCAACTCATTTGTCAATGT
TGGAGGGTAAATTTTTAGCCCATCCATGTGGGGCGAGTCTAATTTGCCCC
CCCACCCAAGACTTGTCAATTCCAAGTTTGACGCTCTGTGCAGACTTTTT
GGGCCGATGTCTTGGTAAATGAATGCGTGTTCACCCGCACTTGCGAACCT
TCGGCTCAGCCGAGGGTTCAAGCGGGTGCTCACTACATATGTGGCTAGTG
AATGCGCCTCTCTCTACCGAAGTTGGGCTCAGAATACCCATTGTCGATGC
TTTTATCTTGTAGATACGACTCGCGCTCTGGTACCCACAACATGTACCGT
GAATACCGCGACTTGACCGTGAGTGCGGCCATCACCCAGTGCTACCGCGA
CATGGGAGCCCGACACAGAGCCCGAGCTCACGCTATCCAGGTAAATTGAC
ATTGGCACCGTTAGCTCCAGCGTCGCCATCACTCGAACCCCCACGTTTCA
GATCATTCGCGTGGAGCCTGTGGCCGCCAGCAAGACCAGGCGTCCCATTG
TGCAGCAAATGCACGACTCCAAGATCAAGTTCCCCCTGACCTCGCGCGTG
CAGAAGCGTGGCGGTTCTATGTTCAAGGCCAAGAGACCCGACACCTACTT
CCAATAAGTGGGGATGACTTACTAAGATATGACCATCTATCCGTCAGCCG
TCAAGCGCGACGTTCAGTGGCATATTGGTTAAATAAACGGCGCCTCCAGT
CTCGACATCGAAATTCTATAGCTCAAAGATTCTCTCGATCGTTCGTTACG
TGGCCCGGATCATGTTTTTGATCCAATCCAACTTTGTCCAAAGACTAGAA
CTATATTAATTAATCACACATCTACCCGGGAGGAGGCTAGCCACG
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Synonyms
The feature '60s ribosomal protein l18a' has the following synonyms
Synonym
Tk07830
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