60s ribosomal protein l18a, maker-scaffold1207_size55689-snap-gene-0.13 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 60s ribosomal protein l18a vs. L. salmonis genes
Match: EMLSAG00000009463 (supercontig:LSalAtl2s:LSalAtl2s60:129351:130208:-1 gene:EMLSAG00000009463 transcript:EMLSAT00000009463 description:"maker-LSalAtl2s60-augustus-gene-1.19") HSP 1 Score: 300.056 bits (767), Expect = 5.267e-106 Identity = 140/175 (80.00%), Postives = 158/175 (90.29%), Query Frame = 0 Query: 1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGSMFKAKRPDTYF 175 MRA G LKEY VIGRKLPT +E T LYRM+IFAPD VVAKSRFWYFLRQLRKFKKTTGEIVSV+ I E++PL++KNFGIWLRYDSRSGTHNMYREYRDL VS A+TQCYRDMGARHRARAH+IQII+VEPV +S RRP+V+QMHDSKI+FPL SRVQK GGS+FKA+RP+TY+ Sbjct: 1 MRAKGNLKEYCVIGRKLPTEKEQVTSLYRMRIFAPDDVVAKSRFWYFLRQLRKFKKTTGEIVSVKLIKEKRPLRVKNFGIWLRYDSRSGTHNMYREYRDLNVSDAVTQCYRDMGARHRARAHSIQIIKVEPVHSSVCRRPLVKQMHDSKIRFPLPSRVQKSGGSLFKARRPNTYY 175
BLAST of 60s ribosomal protein l18a vs. SwissProt
Match: gi|857336418|sp|P0CT68.1|RL20A_SCHPO (RecName: Full=60S ribosomal protein L20-A; AltName: Full=YL17 >gi|857336470|sp|P0CT69.1|RL20B_SCHPO RecName: Full=60S ribosomal protein L20-B; AltName: Full=YL17) HSP 1 Score: 185.652 bits (470), Expect = 2.691e-59 Identity = 92/175 (52.57%), Postives = 121/175 (69.14%), Query Frame = 0 Query: 6 TLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASK-TRRPIVQQMHDSKIKFPLTSR----VQKRGGSMFKAKRPDTYF 175 LKEY+V+GRK+PT EP L+RM++FAP++ VAKSR+WYFL+ + K KK TGEIV++ EI E KPLK K FGIW+RYDSRSGTHNMY+E+RD T A+ Y DM ARHRAR +I+I++V V + RR V+Q+ + +KFPL R V G +F RP T++ Sbjct: 2 ALKEYQVVGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINEISEPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRILKVVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTFY 176
BLAST of 60s ribosomal protein l18a vs. SwissProt
Match: gi|75154179|sp|Q8L7K0.1|R18A1_ARATH (RecName: Full=60S ribosomal protein L18a-1) HSP 1 Score: 181.03 bits (458), Expect = 1.495e-57 Identity = 82/172 (47.67%), Postives = 122/172 (70.93%), Query Frame = 0 Query: 7 LKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSR----VQKRGGSMFKAKRPDTY 174 L +Y+V+GR LPT ++ + +YRMK++A ++V+AKS+FWY+LR+ +K KK+ G+++++ EI E+ P IKNFGIWLRY SR+G HNMY+EYRD T++ A+ Q Y +M +RHR R IQII+ V AS +R +Q H+SKIKFPL R ++ + FKA +P+ + Sbjct: 6 LHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQMLAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLF 177
BLAST of 60s ribosomal protein l18a vs. SwissProt
Match: gi|21431842|sp|P51418.2|R18A2_ARATH (RecName: Full=60S ribosomal protein L18a-2) HSP 1 Score: 177.948 bits (450), Expect = 2.699e-56 Identity = 81/170 (47.65%), Postives = 120/170 (70.59%), Query Frame = 0 Query: 9 EYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSR----VQKRGGSMFKAKRPDTY 174 +Y+V+GR LPT ++ + +YRMK++A ++V AKS+FWYFLR+L+K KK+ G+++++ EI E+ P IKNFGIWLRY SR+G HNMY+EYRD T++ A+ Q Y +M +RHR R IQII+ V A +R +Q H+SKIKFPL R ++ + +KA +P+ + Sbjct: 8 QYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLF 177
BLAST of 60s ribosomal protein l18a vs. SwissProt
Match: gi|21362874|sp|Q9ATF5.1|RL18A_CASSA (RecName: Full=60S ribosomal protein L18a) HSP 1 Score: 176.792 bits (447), Expect = 6.826e-56 Identity = 80/170 (47.06%), Postives = 120/170 (70.59%), Query Frame = 0 Query: 9 EYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSR----VQKRGGSMFKAKRPDTY 174 +Y+V+GR LP+ + +YRMK++A ++V AKS+FWYFLR+L+K KK+ G+++++ EI E+ P KIKN+GIWLRY SR+G HNMY+EYRD T++ A+ Q Y +M +RHR R IQII+ + A +R +Q H+SKIKFPL +R ++ + +KA RP+ + Sbjct: 8 QYQVVGRGLPSETDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRFPCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLVTRKIRPPSRKLKTHYKASRPNLF 177
BLAST of 60s ribosomal protein l18a vs. SwissProt
Match: gi|21362875|sp|Q9LUD4.1|R18A3_ARATH (RecName: Full=60S ribosomal protein L18a-3) HSP 1 Score: 176.022 bits (445), Expect = 1.582e-55 Identity = 78/170 (45.88%), Postives = 117/170 (68.82%), Query Frame = 0 Query: 9 EYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSR----VQKRGGSMFKAKRPDTY 174 +Y+V+GR LPT + +YRMK++ ++V AKS+FWYF+R+L+K KK+ G+++++ EI E+ P IKN+GIWLRY SR+G HNMY+EYRD T++ + Q Y +M +RHR R IQII+ V A +R I +Q H+SKIKFPL R ++ + +KA +P+ + Sbjct: 8 QYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQMLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCIQIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLF 177
BLAST of 60s ribosomal protein l18a vs. SwissProt
Match: gi|21362867|sp|Q943F3.1|RL18A_ORYSJ (RecName: Full=60S ribosomal protein L18a) HSP 1 Score: 173.326 bits (438), Expect = 1.926e-54 Identity = 81/170 (47.65%), Postives = 115/170 (67.65%), Query Frame = 0 Query: 9 EYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSR----VQKRGGSMFKAKRPDTY 174 +Y+V+GR LPT + +YRMK++A ++V AKS+FWYFLR+L+K KK+ G+I+++ EI E+ P IKN+GIWLRY SR+G HNMY+EYRD T++ A+ Q Y +M +RHR R IQII+ V +R +Q H S IKFPL R ++ + FKA RP+ + Sbjct: 8 QYQVVGRGLPTPTDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQILAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVHFKLCKRDNTKQFHKSDIKFPLVYRKVRPPTRKLKTTFKASRPNLF 177
BLAST of 60s ribosomal protein l18a vs. SwissProt
Match: gi|353678069|sp|P0DJ18.1|RL18A_TETTH (RecName: Full=60S ribosomal protein L18a) HSP 1 Score: 138.272 bits (347), Expect = 1.312e-40 Identity = 64/172 (37.21%), Postives = 109/172 (63.37%), Query Frame = 0 Query: 7 LKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRV----QKRGGSMFKAKRPDTY 174 +++Y V +LP + + + +M++FA D+V AK++FWY +R+L K K++ G I+SV EI E+ +K +GI L+Y SR+ HNMY+EYRD++++ A++Q +DM HRA+ IQIIR + +RP M ++ +KFP+ + +K+ +++KA RP T+ Sbjct: 18 VRQYVVSAARLPIEQGTKPEILQMRVFARDEVHAKTKFWYNMRKLNKIKRSQGRILSVNEIYEKSLNTVKTYGIVLKYQSRTAIHNMYKEYRDVSLNGAVSQLIQDMAGNHRAQPDTIQIIRTATLEPKDIKRPATLAMRNAALKFPIVKTIHRPSEKKYRTVYKATRPTTF 189
BLAST of 60s ribosomal protein l18a vs. nr
Match: gi|1325321570|ref|XP_023342598.1| (60S ribosomal protein L18a-like [Eurytemora affinis]) HSP 1 Score: 308.916 bits (790), Expect = 1.591e-105 Identity = 147/176 (83.52%), Postives = 156/176 (88.64%), Query Frame = 0 Query: 1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGSMFKAKRPDTYFQ 176 M+A GTLKEY VIGRKLPT EP TPLYRM+IFA D VVA+SRFWYFLRQLRKFKKTTGEIVSVEEI E+ PLKIKNFGIWLRYDSRSGTHNMYREYRDLTV+ AITQCYRDMGARHRARAHAIQIIR EPVAA K RRP+V Q HDSKIKFPL RVQK+GG+M +A RP TYFQ Sbjct: 1 MKAKGTLKEYTVIGRKLPTEAEPVTPLYRMRIFATDPVVARSRFWYFLRQLRKFKKTTGEIVSVEEIREKNPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVNGAITQCYRDMGARHRARAHAIQIIRCEPVAAGKCRRPLVTQTHDSKIKFPLPRRVQKQGGAMVQANRPSTYFQ 176
BLAST of 60s ribosomal protein l18a vs. nr
Match: gi|1325257850|ref|XP_023324577.1| (60S ribosomal protein L18a-like [Eurytemora affinis]) HSP 1 Score: 308.145 bits (788), Expect = 3.140e-105 Identity = 147/176 (83.52%), Postives = 156/176 (88.64%), Query Frame = 0 Query: 1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGSMFKAKRPDTYFQ 176 M+A GTLKEY VIGRKLPT EP TPLYRM+IFA D VVA+SRFWYFLRQLRKFKKTTGEIVSVEEI E+ PLKIKNFGIWLRYDSRSGTHNMYREYRDLTV+ AITQCYRDMGARHRARAHAIQIIR EPVAA K RRP+V Q HDSKIKFPL RVQK+GG+M +A RP TYFQ Sbjct: 7 MKAKGTLKEYTVIGRKLPTEVEPVTPLYRMRIFATDPVVARSRFWYFLRQLRKFKKTTGEIVSVEEIREKNPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVNGAITQCYRDMGARHRARAHAIQIIRCEPVAAGKCRRPLVTQTHDSKIKFPLPRRVQKQGGAMVQANRPSTYFQ 182
BLAST of 60s ribosomal protein l18a vs. nr
Match: gi|225717860|gb|ACO14776.1| (60S ribosomal protein L18a [Caligus clemensi]) HSP 1 Score: 307.375 bits (786), Expect = 5.202e-105 Identity = 144/175 (82.29%), Postives = 160/175 (91.43%), Query Frame = 0 Query: 1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGSMFKAKRPDTYF 175 MRA GTLKEY VIGRKLPT +E TPLYRM+IFAPD VVAKSRFWYFLRQLRKFKKTTGEIVSV+ I E+KPLK+KNFGIWLRYDSRSGTHNMYREYRDL VS A+TQCYRDMGARHRARAH+IQII+VEPV+++ RRP+V+QMHDSKI+FPL SRVQK GGS+FKA RP+TYF Sbjct: 1 MRAKGTLKEYCVIGRKLPTEKESVTPLYRMRIFAPDVVVAKSRFWYFLRQLRKFKKTTGEIVSVQLIREKKPLKVKNFGIWLRYDSRSGTHNMYREYRDLNVSDAVTQCYRDMGARHRARAHSIQIIKVEPVSSTVCRRPLVKQMHDSKIRFPLPSRVQKSGGSLFKAHRPNTYF 175
BLAST of 60s ribosomal protein l18a vs. nr
Match: gi|961376226|gb|ALS04857.1| (60S ribosomal protein L18a [Pseudodiaptomus poplesia] >gi|961376316|gb|ALS04902.1| 60S ribosomal protein L18a [Pseudodiaptomus poplesia]) HSP 1 Score: 304.679 bits (779), Expect = 6.482e-104 Identity = 143/176 (81.25%), Postives = 156/176 (88.64%), Query Frame = 0 Query: 1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGSMFKAKRPDTYFQ 176 M+A+GTLKEYRVIGRKLPT EP TPLY+M+IFA D VVAKSRFWYFLRQLRKFKKTTGEIVSVEEI E+ PLK+KNFGIWLRYDSRSGTHNMYREYRD+TV+ AITQCYRDMGARHRARAH+IQIIR E VAASK RRP++ Q HDSKIKFPL RVQ+ GS+ KA RP TYFQ Sbjct: 1 MKANGTLKEYRVIGRKLPTEAEPVTPLYKMRIFATDPVVAKSRFWYFLRQLRKFKKTTGEIVSVEEIREKNPLKVKNFGIWLRYDSRSGTHNMYREYRDMTVNGAITQCYRDMGARHRARAHSIQIIRCETVAASKCRRPLIVQTHDSKIKFPLAKRVQRPSGSLVKANRPSTYFQ 176
BLAST of 60s ribosomal protein l18a vs. nr
Match: gi|961376588|gb|ALS05038.1| (60S ribosomal protein L18a [Centropages dorsispinatus]) HSP 1 Score: 303.138 bits (775), Expect = 2.881e-103 Identity = 144/176 (81.82%), Postives = 154/176 (87.50%), Query Frame = 0 Query: 1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGSMFKAKRPDTYFQ 176 M+A GTLKEY VIGRKLPT EP TPLY+M+IFA D VVAKSRFWYFLRQLRKFKKTTGEIVSVEE+ E+ PLKIKNFGIWLRYDSRSGTHNMYREYRDLTV+ AITQCYRDMGARHRARAHAIQIIR EPVAA K RRP+V Q HDSKIKFPL RV K GG + +A RP+TYFQ Sbjct: 1 MKAKGTLKEYTVIGRKLPTEAEPVTPLYKMRIFATDPVVAKSRFWYFLRQLRKFKKTTGEIVSVEEVKEKNPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVNGAITQCYRDMGARHRARAHAIQIIRCEPVAAGKCRRPLVTQPHDSKIKFPLPRRVMKPGGGLVQANRPNTYFQ 176
BLAST of 60s ribosomal protein l18a vs. nr
Match: gi|1148368809|gb|AQS22647.1| (60S ribosomal protein L18a [Pseudodiaptomus poplesia]) HSP 1 Score: 302.368 bits (773), Expect = 5.442e-103 Identity = 142/176 (80.68%), Postives = 156/176 (88.64%), Query Frame = 0 Query: 1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGSMFKAKRPDTYFQ 176 M+A+GTLKEYRVIGRKLPT EP TPLY+M+IFA D VVAKSRFWYFLRQLRKFKKTTGEIVSVEEI E+ PLK+KNFGIWLRYDSRSGTHNMYREYRD+TV+ AITQCYRD+GARHRARAH+IQIIR E VAASK RRP++ Q HDSKIKFPL RVQ+ GS+ KA RP TYFQ Sbjct: 1 MKANGTLKEYRVIGRKLPTEAEPVTPLYKMRIFATDPVVAKSRFWYFLRQLRKFKKTTGEIVSVEEIREKNPLKVKNFGIWLRYDSRSGTHNMYREYRDMTVNGAITQCYRDLGARHRARAHSIQIIRCETVAASKCRRPLIVQTHDSKIKFPLAKRVQRPSGSLVKANRPPTYFQ 176
BLAST of 60s ribosomal protein l18a vs. nr
Match: gi|290562738|gb|ADD38764.1| (60S ribosomal protein L18a [Lepeophtheirus salmonis]) HSP 1 Score: 297.36 bits (760), Expect = 5.213e-101 Identity = 138/175 (78.86%), Postives = 157/175 (89.71%), Query Frame = 0 Query: 1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGSMFKAKRPDTYF 175 MRA G LKEY VIGRKLPT +E T LYRM+IFAPD VVA SRFWYFLRQLRKFKKTTGEIVSV+ I E++PL++KNFGIWLRYDSRSGTHNMYREYRDL VS A+TQCYRDMGARHRARAH+IQII+VEP+ +S RRP+V+QMHDSKI+FPL SRVQK GGS+FKA+RP+TY+ Sbjct: 1 MRAKGNLKEYCVIGRKLPTEKEQVTSLYRMRIFAPDDVVATSRFWYFLRQLRKFKKTTGEIVSVKLIKEKRPLRVKNFGIWLRYDSRSGTHNMYREYRDLNVSDAVTQCYRDMGARHRARAHSIQIIKVEPIHSSVCRRPLVKQMHDSKIRFPLPSRVQKSGGSLFKARRPNTYY 175
BLAST of 60s ribosomal protein l18a vs. nr
Match: gi|961375446|gb|ALS04467.1| (60S ribosomal protein L18a [Acartia pacifica]) HSP 1 Score: 296.204 bits (757), Expect = 1.430e-100 Identity = 138/176 (78.41%), Postives = 154/176 (87.50%), Query Frame = 0 Query: 1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGGSMFKAKRPDTYFQ 176 M+A GTLKEY VIGRKLPT EP TPLY+M+IFA D VVA+SRFWYFLRQLRKFKKTTGEIVS EE+ E+ PLK+KNFGIWLRY+SRSGTHNMYREYRDLT++ AITQCYRDMGARHRARAH+IQIIR E VAA+K RRP+V QMHDSKIKFPL RVQK G M +A RP+T+FQ Sbjct: 1 MKAKGTLKEYTVIGRKLPTETEPVTPLYKMRIFATDPVVARSRFWYFLRQLRKFKKTTGEIVSCEEVREKYPLKVKNFGIWLRYNSRSGTHNMYREYRDLTLNGAITQCYRDMGARHRARAHSIQIIRCEKVAANKCRRPLVTQMHDSKIKFPLPCRVQKTEGQMIQANRPNTFFQ 176
BLAST of 60s ribosomal protein l18a vs. nr
Match: gi|125808079|ref|XP_001360626.1| (uncharacterized protein Dpse_GA19650 [Drosophila pseudoobscura pseudoobscura] >gi|195150529|ref|XP_002016203.1| GL10622 [Drosophila persimilis] >gi|1036945370|ref|XP_017146142.1| PREDICTED: 60S ribosomal protein L18a [Drosophila miranda] >gi|1037036137|ref|XP_017125437.1| PREDICTED: 60S ribosomal protein L18a [Drosophila elegans] >gi|1236495726|ref|XP_022225805.1| 60S ribosomal protein L18a [Drosophila obscura] >gi|54635798|gb|EAL25201.1| uncharacterized protein Dpse_GA19650 [Drosophila pseudoobscura pseudoobscura] >gi|194110050|gb|EDW32093.1| GL10622 [Drosophila persimilis]) HSP 1 Score: 285.034 bits (728), Expect = 3.718e-96 Identity = 130/177 (73.45%), Postives = 153/177 (86.44%), Query Frame = 0 Query: 1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGG-SMFKAKRPDTYFQ 176 MRA G LKEY V+GRKLP+ +EP+TPLY+M+IFAPD +VAKSRFWYFLRQL+KFKKTTGEIVS++++ E P+KIKNFGIWLRYDSRSGTHNMYREYRDLTV A+TQCYRDMGARHRARAH+IQII+VE +AA+KTRR V+Q HDSKIKFPL RV +G +F ++P TYFQ Sbjct: 1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPIKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVESIAAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYFQ 177
BLAST of 60s ribosomal protein l18a vs. nr
Match: gi|1036828331|ref|XP_016976516.1| (PREDICTED: 60S ribosomal protein L18a [Drosophila rhopaloa]) HSP 1 Score: 285.034 bits (728), Expect = 4.431e-96 Identity = 130/177 (73.45%), Postives = 153/177 (86.44%), Query Frame = 0 Query: 1 MRASGTLKEYRVIGRKLPTAEEPETPLYRMKIFAPDQVVAKSRFWYFLRQLRKFKKTTGEIVSVEEILEQKPLKIKNFGIWLRYDSRSGTHNMYREYRDLTVSAAITQCYRDMGARHRARAHAIQIIRVEPVAASKTRRPIVQQMHDSKIKFPLTSRVQKRGG-SMFKAKRPDTYFQ 176 MRA G LKEY V+GRKLP+ +EP+TPLY+M+IFAPD +VAKSRFWYFLRQL+KFKKTTGEIVS++++ E P+KIKNFGIWLRYDSRSGTHNMYREYRDLTV A+TQCYRDMGARHRARAH+IQII+VE +AA+KTRR V+Q HDSKIKFPL RV +G +F ++P TYFQ Sbjct: 1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVESIAAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYFQ 177 The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l18a vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of 60s ribosomal protein l18a vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 17
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BLAST of 60s ribosomal protein l18a vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1207_size55689:25529..26973+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1207_size55689-snap-gene-0.13 ID=maker-scaffold1207_size55689-snap-gene-0.13|Name=60s ribosomal protein l18a|organism=Tigriopus kingsejongensis|type=gene|length=1445bp|location=Sequence derived from alignment at scaffold1207_size55689:25529..26973+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '60s ribosomal protein l18a' has the following synonyms
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