vitamin d3, maker-scaffold120_size336265-snap-gene-1.11 (gene) Tigriopus kingsejongensis

Overview
Namevitamin d3
Unique Namemaker-scaffold120_size336265-snap-gene-1.11
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of vitamin d3 vs. L. salmonis genes
Match: EMLSAG00000005762 (supercontig:LSalAtl2s:LSalAtl2s30:319005:362333:1 gene:EMLSAG00000005762 transcript:EMLSAT00000005762 description:"maker-LSalAtl2s30-augustus-gene-3.10")

HSP 1 Score: 172.17 bits (435), Expect = 9.331e-55
Identity = 87/143 (60.84%), Postives = 121/143 (84.62%), Query Frame = 0
Query:   40 MSEPKNLISVINLTDLAIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIPSK-DRPREV--NMELLKEASHLGVNLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPQRINVLHKDVVKLEQ 179
            +++P NLIS+INLTDLA KRII+M + I  F S+CQED+IALLKGGC+ELM+LRS+ N++ DKNSWR+P+  D  +E+  +M++LKEAS LG+ LY+E+Q+FV SF+PKWR +E ++LLLSAI +F+PQR N++HK+V+KLEQ
Sbjct:   39 LNQPSNLISLINLTDLAXKRIIKMTRGIVAFNSLCQEDRIALLKGGCSELMMLRSIKNFDADKNSWRLPTGCDGSKELTCDMKVLKEASLLGLKLYKEYQKFVLSFNPKWRWNETIILLLSAIIIFSPQRANIVHKNVIKLEQ 181          
BLAST of vitamin d3 vs. SwissProt
Match: gi|2500907|sp|Q24143.1|HR96_DROME (RecName: Full=Nuclear hormone receptor HR96; Short=dHR96; AltName: Full=Nuclear receptor subfamily 1 group J member 1)

HSP 1 Score: 180.259 bits (456), Expect = 3.784e-52
Identity = 93/185 (50.27%), Postives = 129/185 (69.73%), Query Frame = 0
Query:    7 KSLNDRENDRLRELFLASRSLVEPVDLEKSPFSMSE-----------PKNLISVINLTDLAIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIP-SKDRPREVNMELLKEASHLGVNLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPQRINVLHKDVVKLEQ 179
            + LN+ E  +LREL LAS +L +PVD + S   M +           PK L+ +INLT +AIKR+I+MAKKIT F  MCQEDQ+ALLKGGCTE+MI+RSV+ Y+ D+ +W++P +K+    +  +LLK A     N+YEEHQ+F+ +FD KWR DEN++L++ AI LF   R  V+HKDV++LEQ
Sbjct:  477 RELNEAEQMKLRELRLASEALYDPVDEDLSALMMGDDRIKPDDTRHNPK-LLQLINLTAVAIKRLIKMAKKITAFRDMCQEDQVALLKGGCTEMMIMRSVMIYDDDRAAWKVPHTKENMGNIRTDLLKFAEG---NIYEEHQKFITTFDEKWRMDENIILIMCAIVLFTSARSRVIHKDVIRLEQ 657          
BLAST of vitamin d3 vs. SwissProt
Match: gi|12643939|sp|Q9XYB7.1|NHR8_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-8)

HSP 1 Score: 65.0846 bits (157), Expect = 1.532e-11
Identity = 48/165 (29.09%), Postives = 84/165 (50.91%), Query Frame = 0
Query:    9 LNDRENDRLRELFLASRSLVEPVDLEKSPFSMSEPKNLISVINLTDLAIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIPSKDRPR-EVNMELLKEA---SHLGVNLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPQRINV 169
            LN+ E   L EL + +  L  P+           PK++  V  + + A++RI+ MA +++ F  +  +D+  LLK G  EL+I+R ++ Y+   NSW      R + EV +E+LK      H     Y+ H   + +F    R +E++ML+ +A  +F+P   N+
Sbjct:  333 LNEDEITLLEELHVQNEPLNAPL------IQWHNPKSIDGVFRIIEEALRRIVNMACQLSLFRELHVDDRKNLLKSGFGELLIVRGLMAYDKSDNSWNHSFGVRGKMEVKVEVLKNPKLEEH-----YKAHMNLLSTFGEDVRNNEHLMLIFNAAVIFHPHVSNL 486          
BLAST of vitamin d3 vs. SwissProt
Match: gi|124028632|sp|P45446.3|RORB_RAT (RecName: Full=Nuclear receptor ROR-beta; AltName: Full=Nuclear receptor RZR-beta; AltName: Full=Nuclear receptor subfamily 1 group F member 2; AltName: Full=Retinoid-related orphan receptor-beta)

HSP 1 Score: 58.151 bits (139), Expect = 3.361e-9
Identity = 43/126 (34.13%), Postives = 67/126 (53.17%), Query Frame = 0
Query:   56 AIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIPSKDRPREVNMELLKEASHLGV-NLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPQRINVLH-KDVVKLEQ 179
            AI+ ++  AK+IT F+ +CQ DQI LLK GC E++++R    +NP  N+     K       M++ K    LG  +L  E   F K+      T+E + L  SA+ L +P R  +L  + V KL++
Sbjct:  280 AIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGK----YGGMQMFKA---LGSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAV-LISPDRAWLLEPRKVQKLQE 397          
BLAST of vitamin d3 vs. SwissProt
Match: gi|124028631|sp|Q8R1B8.3|RORB_MOUSE (RecName: Full=Nuclear receptor ROR-beta; AltName: Full=Nuclear receptor RZR-beta; AltName: Full=Nuclear receptor subfamily 1 group F member 2; AltName: Full=Retinoid-related orphan receptor-beta)

HSP 1 Score: 57.7658 bits (138), Expect = 4.691e-9
Identity = 39/112 (34.82%), Postives = 59/112 (52.68%), Query Frame = 0
Query:   56 AIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIPSKDRPREVNMELLKEASHLGV-NLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPQR 166
            AI+ ++  AK+IT F+ +CQ DQI LLK GC E++++R    +NP  N+     K       M++ K    LG  +L  E   F K+      T+E + L  SA+ L +P R
Sbjct:  280 AIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYG----GMQMFKA---LGSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAV-LISPDR 383          
BLAST of vitamin d3 vs. SwissProt
Match: gi|124028630|sp|Q92753.3|RORB_HUMAN (RecName: Full=Nuclear receptor ROR-beta; AltName: Full=Nuclear receptor RZR-beta; AltName: Full=Nuclear receptor subfamily 1 group F member 2; AltName: Full=Retinoid-related orphan receptor-beta)

HSP 1 Score: 57.7658 bits (138), Expect = 4.873e-9
Identity = 39/112 (34.82%), Postives = 59/112 (52.68%), Query Frame = 0
Query:   56 AIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIPSKDRPREVNMELLKEASHLGV-NLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPQR 166
            AI+ ++  AK+IT F+ +CQ DQI LLK GC E++++R    +NP  N+     K       M++ K    LG  +L  E   F K+      T+E + L  SA+ L +P R
Sbjct:  280 AIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYG----GMQMFKA---LGSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAV-LISPDR 383          
BLAST of vitamin d3 vs. SwissProt
Match: gi|269849736|sp|P15204.3|THAA_XENLA (RecName: Full=Thyroid hormone receptor alpha-A; Short=TRalphaA; Short=XenTR-alpha1; AltName: Full=Nuclear receptor subfamily 1 group A member 1-A)

HSP 1 Score: 55.8398 bits (133), Expect = 2.030e-8
Identity = 43/155 (27.74%), Postives = 75/155 (48.39%), Query Frame = 0
Query:   30 PVDLEKSPFSMSEPKNLISVINLTDL------AIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIPSKDRPREVNMELLKEASHLGV--NLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPQRINVLHKDVVK 176
            P D+ +SP +     + + +   ++       AI R++  AKK+  F  +  EDQI LLKG C E+M LR+ + Y+PD  +  +  +     V  E LK    LGV  +   +  R + +F+     D+  + LL A+ L +  R  ++  D ++
Sbjct:  201 PEDIGQSPMASMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELTCEDQIILLKGCCMEIMSLRAAVRYDPDSETLTLSGE---MAVKREQLKNGG-LGVVSDAIFDLGRSLAAFN----LDDTEVALLQAVLLMSSDRTGLICTDKIE 347          
BLAST of vitamin d3 vs. SwissProt
Match: gi|6175061|sp|P18115.2|THAB_XENLA (RecName: Full=Thyroid hormone receptor alpha-B; Short=TRalphaB; AltName: Full=Nuclear receptor subfamily 1 group A member 1-B)

HSP 1 Score: 55.8398 bits (133), Expect = 2.232e-8
Identity = 43/155 (27.74%), Postives = 75/155 (48.39%), Query Frame = 0
Query:   30 PVDLEKSPFSMSEPKNLISVINLTDL------AIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIPSKDRPREVNMELLKEASHLGV--NLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPQRINVLHKDVVK 176
            P D+ +SP +     + + +   ++       AI R++  AKK+  F  +  EDQI LLKG C E+M LR+ + Y+PD  +  +  +     V  E LK    LGV  +   +  R + +F+     D+  + LL A+ L +  R  ++  D ++
Sbjct:  201 PEDIGQSPMASMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELTCEDQIILLKGCCMEIMSLRAAVRYDPDSETLTLSGE---MAVKREQLKNGG-LGVVSDAIFDLGRSLAAFN----LDDTEVALLQAVLLMSSDRTGLICTDKIE 347          
BLAST of vitamin d3 vs. SwissProt
Match: gi|939319623|sp|G5EFF5.1|DAF12_CAEEL (RecName: Full=Nuclear hormone receptor family member daf-12; AltName: Full=Abnormal dauer formation protein 12)

HSP 1 Score: 54.6842 bits (130), Expect = 5.304e-8
Identity = 33/123 (26.83%), Postives = 65/123 (52.85%), Query Frame = 0
Query:   44 KNLISVINLTDLAIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIPS-KDRPREVNMELLKEASHLGVNLYEEHQR---FVKSFDPKWRTDENVMLLLSAIALF 162
            K    ++N+ D+ ++R +++AK +  F  + QE + +LLKGG  E++ +R V  Y+   NS++ P+ K +   VN++ +   + L  N   +  +   F   FD + + +E  + L+    LF
Sbjct:  549 KTPADIMNIMDVTMRRFVKVAKGVPAFREVSQEGKFSLLKGGMIEMLTVRGVTRYDASTNSFKTPTIKGQNVSVNVDDM--FAKLNANAQAQKAKCLEFFGFFDEEIKKNELAVYLVMLAVLF 669          
BLAST of vitamin d3 vs. SwissProt
Match: gi|3915241|sp|O13124.1|VDR_XENLA (RecName: Full=Vitamin D3 receptor; Short=VDR; AltName: Full=1,25-dihydroxyvitamin D3 receptor; AltName: Full=Nuclear receptor subfamily 1 group I member 1)

HSP 1 Score: 53.9138 bits (128), Expect = 8.638e-8
Identity = 43/136 (31.62%), Postives = 64/136 (47.06%), Query Frame = 0
Query:   49 VINLTDLAIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIPSKDRPREV--------NMELLKEASHLGVNLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPQRINVLHKDVVK 176
            + +L   +I++II  AK I  F  +  EDQIALLK    E+++LRS  +++ D  SW   S+D   +V        NMELL+      V L             K    E   +LL AI + +P R  +  K +V+
Sbjct:  225 IADLVSYSIQKIIGFAKMIPGFRDLIAEDQIALLKSSVIEVIMLRSNQSFSLDDMSWTCGSEDFKYKVDDVTQAGHNMELLEPLVKFQVGL------------KKLDLHEEEHVLLMAICILSPDRPGLQDKALVE 348          
BLAST of vitamin d3 vs. SwissProt
Match: gi|586091|sp|Q02777.1|THA_LITCT (RecName: Full=Thyroid hormone receptor alpha; AltName: Full=Nuclear receptor subfamily 1 group A member 1)

HSP 1 Score: 53.9138 bits (128), Expect = 8.943e-8
Identity = 39/123 (31.71%), Postives = 63/123 (51.22%), Query Frame = 0
Query:   56 AIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIPSKDRPREVNMELLKEASHLGV--NLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPQRINVLHKDVVK 176
            AI R++  AKK+  F  +  EDQI LLKG C E+M LR+ + Y+PD  +  +  +     V  E LK    LGV  +   +  R + +F+     D+  + LL A+ L +  R  ++  D ++
Sbjct:  233 AITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPDSETLTLSGE---MAVKREQLKNGG-LGVVSDAIFDLGRSLSAFN----LDDTEVALLQAVLLMSSDRTGLICTDKIE 347          
BLAST of vitamin d3 vs. nr
Match: gi|657600340|gb|AID52831.1| (hormone receptor 96 [Tigriopus japonicus])

HSP 1 Score: 340.502 bits (872), Expect = 8.215e-112
Identity = 164/179 (91.62%), Postives = 171/179 (95.53%), Query Frame = 0
Query:    1 MHSRSGKSLNDRENDRLRELFLASRSLVEPVDLEKSPFSMSEPKNLISVINLTDLAIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIPSKDRPREVNMELLKEASHLGVNLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPQRINVLHKDVVKLEQ 179
            MHS +GKSLNDRE DRL ELF+ASRSLVEP+DLEKSPFS ++PKNLISV+NLTDLAIKRIIRMAKKI PFI+MCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIPSKDRPREVNMELLKEAS LGVNLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNP R NVLHKDVVKLEQ
Sbjct:  385 MHSLTGKSLNDRETDRLHELFMASRSLVEPLDLEKSPFSNADPKNLISVVNLTDLAIKRIIRMAKKINPFITMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIPSKDRPREVNMELLKEASQLGVNLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPDRSNVLHKDVVKLEQ 563          
BLAST of vitamin d3 vs. nr
Match: gi|242019208|ref|XP_002430056.1| (Vitamin D3 receptor, putative [Pediculus humanus corporis] >gi|212515126|gb|EEB17318.1| Vitamin D3 receptor, putative [Pediculus humanus corporis])

HSP 1 Score: 192.971 bits (489), Expect = 1.057e-58
Identity = 99/190 (52.11%), Postives = 139/190 (73.16%), Query Frame = 0
Query:    1 MHSR-SGKSLNDRENDRLRELFLASRSLVEPV--DLEKSPFSMS-------EPKNLISVINLTDLAIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIP-SKDRPREVNMELLKEASHLGVNLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPQRINVLHKDVVKLEQ 179
            M+SR S + LND E  +L EL +A+++L+ P+  DL    F  +        P  L+ V+NLT +AI+R+I+M+KKI  F +MCQ+DQIALLKGGCTE+MILRS + Y+PD++SW+IP SK++   + +++LKEA   G  ++EEHQRF+++FD KWR DEN+ML+LSAIALF P R  V+H DV+KLEQ
Sbjct:    1 MNSRASSRELNDAERAKLNELIVANKALLAPLEDDLSGDDFGFNVNAMAGCGPSVLVDVLNLTAVAIRRLIKMSKKINAFKNMCQDDQIALLKGGCTEMMILRSAMTYDPDRDSWKIPQSKEKLMNIKVDILKEA---GGRVFEEHQRFLQTFDQKWRNDENIMLILSAIALFTPDRPRVVHFDVIKLEQ 187          
BLAST of vitamin d3 vs. nr
Match: gi|1325311523|ref|XP_023337390.1| (nuclear hormone receptor HR96-like isoform X2 [Eurytemora affinis])

HSP 1 Score: 196.052 bits (497), Expect = 1.618e-57
Identity = 101/176 (57.39%), Postives = 133/176 (75.57%), Query Frame = 0
Query:    8 SLNDRENDRLRELFLASRSLVEPVDLEKSP----FSMSEPKNLISVINLTDLAIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIPSKDRPREVNMELLKEASHLGVNLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPQRINVLHKDVVKLEQ 179
            +LN+RE  R+ EL +AS+SL EP   ++      F M EPK LISV+NLT+LA+KRII M K+I+ F ++CQEDQ+ LLKGGC ELM+LRSV+++N +KN+W++P      E++M++LKEAS  GVNLYEEHQRF  SF   +RTDE +MLLLSAIALF+  R N+ HK VV+LEQ
Sbjct:  221 TLNEREKARINELCIASKSLDEPFKEDEQHVVINFQM-EPK-LISVLNLTNLAVKRIINMTKQISAFANLCQEDQLVLLKGGCLELMLLRSVLSFNSEKNTWQLPGMSFKEELSMDVLKEASVHGVNLYEEHQRFASSFPAVYRTDETIMLLLSAIALFSQDRNNMKHKTVVQLEQ 394          
BLAST of vitamin d3 vs. nr
Match: gi|1325311521|ref|XP_023337389.1| (nuclear hormone receptor HR96-like isoform X1 [Eurytemora affinis])

HSP 1 Score: 196.052 bits (497), Expect = 1.637e-57
Identity = 101/176 (57.39%), Postives = 133/176 (75.57%), Query Frame = 0
Query:    8 SLNDRENDRLRELFLASRSLVEPVDLEKSP----FSMSEPKNLISVINLTDLAIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIPSKDRPREVNMELLKEASHLGVNLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPQRINVLHKDVVKLEQ 179
            +LN+RE  R+ EL +AS+SL EP   ++      F M EPK LISV+NLT+LA+KRII M K+I+ F ++CQEDQ+ LLKGGC ELM+LRSV+++N +KN+W++P      E++M++LKEAS  GVNLYEEHQRF  SF   +RTDE +MLLLSAIALF+  R N+ HK VV+LEQ
Sbjct:  222 TLNEREKARINELCIASKSLDEPFKEDEQHVVINFQM-EPK-LISVLNLTNLAVKRIINMTKQISAFANLCQEDQLVLLKGGCLELMLLRSVLSFNSEKNTWQLPGMSFKEELSMDVLKEASVHGVNLYEEHQRFASSFPAVYRTDETIMLLLSAIALFSQDRNNMKHKTVVQLEQ 395          
BLAST of vitamin d3 vs. nr
Match: gi|1022757771|gb|KZS04364.1| (Nuclear hormone receptor HR96 [Daphnia magna])

HSP 1 Score: 197.208 bits (500), Expect = 2.501e-57
Identity = 95/177 (53.67%), Postives = 138/177 (77.97%), Query Frame = 0
Query:    7 KSLNDRENDRLRELFLASRSLVEPVDLEKSPFSM---SEPKNLISVINLTDLAIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIP-SKDRPREVNMELLKEASHLGVNLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPQRINVLHKDVVKLEQ 179
            + LN+ E  +L+EL +A+++L+ P+  E  P ++   S    L++VINLTD+AI+RII+MAKK+  F ++CQEDQIALLKGGCTELMILR+V++Y+ DK  W+IP ++     + +E+LKEA     NLYEEHQR+++SFDP+WR+DE++MLLLSAI LF+P R++V+H+D +KLEQ
Sbjct:  284 RQLNELEAAKLQELVVANKALLAPL-TEDGPVNLHYDSGDPTLLNVINLTDIAIRRIIKMAKKLAAFKTLCQEDQIALLKGGCTELMILRAVMSYDADKGCWKIPHTESHMNHIKVEVLKEAQG---NLYEEHQRYIQSFDPQWRSDEHIMLLLSAITLFDPNRLHVIHRDAIKLEQ 456          
BLAST of vitamin d3 vs. nr
Match: gi|1228404000|ref|XP_021961086.1| (nuclear hormone receptor HR96-like [Folsomia candida])

HSP 1 Score: 199.519 bits (506), Expect = 1.621e-56
Identity = 102/174 (58.62%), Postives = 131/174 (75.29%), Query Frame = 0
Query:    7 KSLNDRENDRLRELFLASRSLVEPVDLEKS-PFSMSEPKNLISVINLTDLAIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIPSKDRPREVNMELLKEASHLGVNLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPQRINVLHKDVVKLEQ 179
            ++LN  E  +L ELF AS +L  PVDL+       S+P +LI+VINLTD+AI+R+I+M+KKI  F +MCQEDQIALLKGGCTE+MILRSV++Y+P+++SW IP  +    V + +LKEA     NLYEEHQRFVKSF   WR D N+M++L AI LF P+R NV+HKDVVKLEQ
Sbjct:  575 RTLNKAEKAKLSELFFASEALNAPVDLDGPIKIGTSDP-SLINVINLTDIAIRRLIKMSKKICAFKNMCQEDQIALLKGGCTEMMILRSVVSYDPERDSWNIPHSNG-FNVKLGVLKEAR---GNLYEEHQRFVKSFKGDWRADYNIMIILCAITLFTPERPNVIHKDVVKLEQ 743          
BLAST of vitamin d3 vs. nr
Match: gi|1215259117|gb|OXA45442.1| (Nuclear hormone receptor HR96 [Folsomia candida])

HSP 1 Score: 199.904 bits (507), Expect = 1.680e-56
Identity = 102/174 (58.62%), Postives = 131/174 (75.29%), Query Frame = 0
Query:    7 KSLNDRENDRLRELFLASRSLVEPVDLEKS-PFSMSEPKNLISVINLTDLAIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIPSKDRPREVNMELLKEASHLGVNLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPQRINVLHKDVVKLEQ 179
            ++LN  E  +L ELF AS +L  PVDL+       S+P +LI+VINLTD+AI+R+I+M+KKI  F +MCQEDQIALLKGGCTE+MILRSV++Y+P+++SW IP  +    V + +LKEA     NLYEEHQRFVKSF   WR D N+M++L AI LF P+R NV+HKDVVKLEQ
Sbjct:  608 RTLNKAEKAKLSELFFASEALNAPVDLDGPIKIGTSDP-SLINVINLTDIAIRRLIKMSKKICAFKNMCQEDQIALLKGGCTEMMILRSVVSYDPERDSWNIPHSNG-FNVKLGVLKEAR---GNLYEEHQRFVKSFKGDWRADYNIMIILCAITLFTPERPNVIHKDVVKLEQ 776          
BLAST of vitamin d3 vs. nr
Match: gi|321478847|gb|EFX89804.1| (hypothetical protein DAPPUDRAFT_303110 [Daphnia pulex])

HSP 1 Score: 194.897 bits (494), Expect = 1.892e-56
Identity = 97/177 (54.80%), Postives = 135/177 (76.27%), Query Frame = 0
Query:    7 KSLNDRENDRLRELFLASRSLVEPVDLEKSPFSM---SEPKNLISVINLTDLAIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIPSKDRP-REVNMELLKEASHLGVNLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPQRINVLHKDVVKLEQ 179
            + LN+ E  +L+EL +A+++L+ P+  E+ P  +   S    L++VINLTD+AI+RII+MAKK+  F ++CQEDQIALLKGGCTELMILRSV++Y+ DK  W+IP  D     + +E+LKEA     NLYEEHQR+++SFDP WR+DE++MLLLSAI LF+P R +V+H+D +KLEQ
Sbjct:  286 RQLNELEMAKLQELVVANKALLAPL-TEERPVDLHYDSGDPTLLNVINLTDIAIRRIIKMAKKLAAFKTLCQEDQIALLKGGCTELMILRSVMSYDADKGCWKIPHTDSHMNHIKVEVLKEAQG---NLYEEHQRYIQSFDPLWRSDEHIMLLLSAITLFDPNRPHVIHRDAIKLEQ 458          
BLAST of vitamin d3 vs. nr
Match: gi|1080033894|ref|XP_018564592.1| (nuclear hormone receptor HR96 isoform X2 [Anoplophora glabripennis])

HSP 1 Score: 193.741 bits (491), Expect = 7.451e-56
Identity = 98/192 (51.04%), Postives = 136/192 (70.83%), Query Frame = 0
Query:    2 HSRSGKSLNDRENDRLRELFLASRSLVEPVD--------LEKSPFSMSEPK------NLISVINLTDLAIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIPSKDRPREVNMELLKEASHLGVNLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPQRINVLHKDVVKLEQ 179
            HS S + LND E  +L EL +A+++L+ PVD        ++   F  + PK       L+ VINLT L I+R+I+MAKKI  F +MCQEDQ+ALLKGGCTE+MILRS +NY+P K +W IPS+D    +N+++LK A     N+Y+EH+RF+K+FDPKWR DEN++L+L A+ LF P+R  V+H+DV+KLEQ
Sbjct:  285 HSNS-RELNDAERAKLNELIVANKALLPPVDDELNSLLTVDDCKFKGNPPKMLDADPGLLDVINLTALVIRRLIKMAKKINSFKNMCQEDQVALLKGGCTEIMILRSAMNYDPKKQTWNIPSQDNIT-LNVDVLKLAKG---NIYQEHERFIKTFDPKWRVDENIILILCAVVLFTPERQRVIHQDVIKLEQ 471          
BLAST of vitamin d3 vs. nr
Match: gi|1316149250|ref|XP_023219761.1| (nuclear hormone receptor HR96-like isoform X2 [Centruroides sculpturatus])

HSP 1 Score: 191.045 bits (484), Expect = 1.176e-55
Identity = 94/178 (52.81%), Postives = 134/178 (75.28%), Query Frame = 0
Query:    2 HSRSGKSLNDRENDRLRELFLASRSLVEPVDLEKSPFSMSEPKNLISVINLTDLAIKRIIRMAKKITPFISMCQEDQIALLKGGCTELMILRSVINYNPDKNSWRIPSKDRPREVNMELLKEASHLGVNLYEEHQRFVKSFDPKWRTDENVMLLLSAIALFNPQRINVLHKDVVKLEQ 179
            ++ S K L++ E+++L EL +A+  L  P+      F + +P +L+ VIN+TD AI+R+I+M+KKI  F ++CQ+DQIALLKGGCTELMILRSV++Y+P+K+ W  P   +   + +++LKEA     N+YEEH+RF+ SFDP WR DENVML+LSAIALF P+R N++HKDVVK+EQ
Sbjct:  217 YNSSFKKLSETEHNKLDELIVANEILKMPL-----IFGVPDP-SLLDVINMTDHAIRRLIKMSKKINGFKTLCQDDQIALLKGGCTELMILRSVMSYDPEKDCWHGPQGPKTMSIKVDILKEAKG---NVYEEHKRFINSFDPVWRADENVMLILSAIALFTPERPNIVHKDVVKMEQ 385          
The following BLAST results are available for this feature:
BLAST of vitamin d3 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000057629.331e-5560.84supercontig:LSalAtl2s:LSalAtl2s30:319005:362333:1 ... [more]
back to top
BLAST of vitamin d3 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
gi|2500907|sp|Q24143.1|HR96_DROME3.784e-5250.27RecName: Full=Nuclear hormone receptor HR96; Short... [more]
gi|12643939|sp|Q9XYB7.1|NHR8_CAEEL1.532e-1129.09RecName: Full=Nuclear hormone receptor family memb... [more]
gi|124028632|sp|P45446.3|RORB_RAT3.361e-934.13RecName: Full=Nuclear receptor ROR-beta; AltName: ... [more]
gi|124028631|sp|Q8R1B8.3|RORB_MOUSE4.691e-934.82RecName: Full=Nuclear receptor ROR-beta; AltName: ... [more]
gi|124028630|sp|Q92753.3|RORB_HUMAN4.873e-934.82RecName: Full=Nuclear receptor ROR-beta; AltName: ... [more]
gi|269849736|sp|P15204.3|THAA_XENLA2.030e-827.74RecName: Full=Thyroid hormone receptor alpha-A; Sh... [more]
gi|6175061|sp|P18115.2|THAB_XENLA2.232e-827.74RecName: Full=Thyroid hormone receptor alpha-B; Sh... [more]
gi|939319623|sp|G5EFF5.1|DAF12_CAEEL5.304e-826.83RecName: Full=Nuclear hormone receptor family memb... [more]
gi|3915241|sp|O13124.1|VDR_XENLA8.638e-831.62RecName: Full=Vitamin D3 receptor; Short=VDR; AltN... [more]
gi|586091|sp|Q02777.1|THA_LITCT8.943e-831.71RecName: Full=Thyroid hormone receptor alpha; AltN... [more]

Pages

back to top
BLAST of vitamin d3 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|657600340|gb|AID52831.1|8.215e-11291.62hormone receptor 96 [Tigriopus japonicus][more]
gi|242019208|ref|XP_002430056.1|1.057e-5852.11Vitamin D3 receptor, putative [Pediculus humanus c... [more]
gi|1325311523|ref|XP_023337390.1|1.618e-5757.39nuclear hormone receptor HR96-like isoform X2 [Eur... [more]
gi|1325311521|ref|XP_023337389.1|1.637e-5757.39nuclear hormone receptor HR96-like isoform X1 [Eur... [more]
gi|1022757771|gb|KZS04364.1|2.501e-5753.67Nuclear hormone receptor HR96 [Daphnia magna][more]
gi|1228404000|ref|XP_021961086.1|1.621e-5658.62nuclear hormone receptor HR96-like [Folsomia candi... [more]
gi|1215259117|gb|OXA45442.1|1.680e-5658.62Nuclear hormone receptor HR96 [Folsomia candida][more]
gi|321478847|gb|EFX89804.1|1.892e-5654.80hypothetical protein DAPPUDRAFT_303110 [Daphnia pu... [more]
gi|1080033894|ref|XP_018564592.1|7.451e-5651.04nuclear hormone receptor HR96 isoform X2 [Anoploph... [more]
gi|1316149250|ref|XP_023219761.1|1.176e-5552.81nuclear hormone receptor HR96-like isoform X2 [Cen... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold120_size336265supercontigscaffold120_size336265:88636..89300 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold120_size336265-snap-gene-1.11-mRNA-1maker-scaffold120_size336265-snap-gene-1.11-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold120_size336265:88636..89300-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold120_size336265-snap-gene-1.11 ID=maker-scaffold120_size336265-snap-gene-1.11|Name=vitamin d3|organism=Tigriopus kingsejongensis|type=gene|length=665bp|location=Sequence derived from alignment at scaffold120_size336265:88636..89300- (Tigriopus kingsejongensis)
ATGCATTCGCGGTCCGGGAAATCCTTGAATGACCGCGAAAACGATCGCCT CCGAGAACTCTTTCTGGCCTCGAGATCCTTGGTGGAGCCGGTGGACCTGG AGAAGAGTGTAAGTAGGTGCCAGTGATTGCATGAAGGACATTTTCTCAAT CAGTCGTGTGTTCCAGCCCTTTTCGATGAGTGAGCCGAAGAACCTGATTA GCGTGATCAACTTGACGGATCTGGCCATCAAGCGGATCATTCGGATGGCC AAAAAGATCACACCATTTATCAGTATGTGTCAAGAGGACCAGATTGCTCT GCTCAAAGGAGGTTGTACGGAACTAATGATTCTCAGATCAGTCATTAATT ACAATCCAGACAAAAACTCCTGGCGGGTACGACTTTTCTCGTTAATGACC AGGAGCCTTCCAACTCAAACATCCTCATCACTTTTTCTTGTCTCAGATTC CCTCCAAGGATCGTCCCAGAGAGGTGAATATGGAGCTTTTGAAGGAAGCC AGCCATCTAGGGGTGAATCTGTACGAGGAACACCAGCGCTTTGTCAAGTC ATTCGACCCCAAATGGAGGACTGATGAGAATGTCATGCTCCTTCTCTCAG CCATTGCCCTCTTCAATCCACAAAGAATCAATGTCTTGCACAAAGATGTG GTCAAACTGGAGCAA
back to top
Synonyms
The feature 'vitamin d3' has the following synonyms
Synonym
Tk08786
Add to Basket