nuclear receptor nhr-48, maker-scaffold120_size336265-snap-gene-1.12 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000013004 (supercontig:LSalAtl2s:LSalAtl2s98:942409:953748:1 gene:EMLSAG00000013004 transcript:EMLSAT00000013004 description:"augustus_masked-LSalAtl2s98-processed-gene-9.1") HSP 1 Score: 76.2554 bits (186), Expect = 7.217e-15 Identity = 34/81 (41.98%), Postives = 44/81 (54.32%), Query Frame = 0 Query: 284 LCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQK 364 LCAVCGD A ++ TCE CK FF+R KN + C C V R CQ CR +KC +GM KE + +D K ++ Sbjct: 408 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRR 488
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000007361 (supercontig:LSalAtl2s:LSalAtl2s418:374353:376789:1 gene:EMLSAG00000007361 transcript:EMLSAT00000007361 description:"maker-LSalAtl2s418-augustus-gene-3.13") HSP 1 Score: 74.7146 bits (182), Expect = 2.104e-14 Identity = 33/86 (38.37%), Postives = 50/86 (58.14%), Query Frame = 0 Query: 282 VKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMK 367 ++ CAVCGD+A G ++ A +C+ CK FFRR+ K + + C + C V R C+ CRLK C GMKK + ++ ++ R K Sbjct: 148 IQNCAVCGDRATGKHYGAASCDGCKGFFRRSVRKERVYGCRQNRACIVNKDKRNNCRYCRLKMCIKAGMKKSAVQNERDRISCRKK 233
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000009940 (supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-1 gene:EMLSAG00000009940 transcript:EMLSAT00000009940 description:"maker-LSalAtl2s649-augustus-gene-4.7") HSP 1 Score: 74.3294 bits (181), Expect = 2.979e-14 Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 0 Query: 285 CAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWI 355 C VCGDK+ G ++ TCE CK+FF+R+ + ++C S C + R CQ CRLKKC +GM+KE + Sbjct: 434 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRALTYQCRGSRSCPIDQHHRNQCQHCRLKKCIKMGMRKEAV 504
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000001919 (supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1 gene:EMLSAG00000001919 transcript:EMLSAT00000001919 description:"augustus_masked-LSalAtl2s132-processed-gene-6.5") HSP 1 Score: 72.0182 bits (175), Expect = 1.080e-13 Identity = 28/72 (38.89%), Postives = 40/72 (55.56%), Query Frame = 0 Query: 284 LCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWI 355 C++CGD+A G ++ +CE CK FF+R K + C + C + R CQ CR KC D GMK+E + Sbjct: 90 FCSICGDRASGKHYGVYSCEGCKGFFKRTVRKELTYACRENRDCVIDKRQRNRCQYCRYMKCLDTGMKREAV 161
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000010267 (supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19") HSP 1 Score: 71.2478 bits (173), Expect = 2.154e-13 Identity = 51/166 (30.72%), Postives = 76/166 (45.78%), Query Frame = 0 Query: 255 HVDQEETVETSGGKADNDSNDA--SDKSLVKLCAVCGDKALGY-NFNALTCESCKAFFRRNALKN--KDFKCPFSNK-CEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESPGPDLS----TGSQPPPLVFTINND 410 + DQE E + DS+ ++L +LC +CG+ A + + C SC+AFFRR+ N K F C K C + + TR+ CQ CR +KC GM+ W+ D E++ K+ + N K P P + S +VFTINN+ Sbjct: 75 NADQENFNELNSTTLSEDSSQIIIGRQALPRLCQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFICCSQTKDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPDRERRSKKSAMTLNNNK--------------PPLPSFNDPEGLTSIEVSIVFTINNN 226
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000007741 (supercontig:LSalAtl2s:LSalAtl2s450:172104:174744:-1 gene:EMLSAG00000007741 transcript:EMLSAT00000007741 description:"maker-LSalAtl2s450-snap-gene-2.9") HSP 1 Score: 71.633 bits (174), Expect = 2.375e-13 Identity = 35/132 (26.52%), Postives = 67/132 (50.76%), Query Frame = 0 Query: 247 RRFKMDPLHVDQEETVETSGGKADNDSNDASDKSLVKL-CAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCP----FSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRA 373 ++F++ LH T +T N + + L+ + C VCGD++ G ++ +C+ C FF+R+ + + + C F +C + R C+ CRLKKCFD M K+ + + ++ +++ + N A Sbjct: 69 QKFRLFALHQRNLLTKKTHSKIVVNKTEMGTGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRQRIYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDCSMNKDAVQHERGPRKSKLQKDLNSA 200
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000011907 (supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22") HSP 1 Score: 70.0922 bits (170), Expect = 4.782e-13 Identity = 45/136 (33.09%), Postives = 71/136 (52.21%), Query Frame = 0 Query: 279 KSLVKLCAVCGDKALGY-NFNALTCESCKAFFRRNALKNKDFK----CPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESPGPDLSTGSQPPPLVFTINN 409 ++L +LC +CG+ A + + C SC+AFFRR +++N +K C + C + + TR+ CQ CR +KC GM+ W+L D E++ K+ + N ++ P S + PG S VFTINN Sbjct: 100 EALPRLCQICGEVAGKHVYYGGQCCTSCRAFFRR-SVQNNSYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGMRASWVLPDGERRSKKSAMILN-----NNTPLLP--SFDDPG---GLTSLEVSFVFTINN 224
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000008261 (supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3") HSP 1 Score: 69.707 bits (169), Expect = 5.605e-13 Identity = 29/73 (39.73%), Postives = 43/73 (58.90%), Query Frame = 0 Query: 285 CAVCGDKALGY-NFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWIL 356 C +C D A + ++ A+ C SC+AFFRR + N ++ C C +T TR+ CQ CR KC + GMK W++ Sbjct: 63 CHICSDTANDHIHYGAIACXSCRAFFRRAVICNAEYHCSRDKTCFITKETRKHCQFCRFNKCLEAGMKNTWVM 135
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000012291 (supercontig:LSalAtl2s:LSalAtl2s898:43780:47597:-1 gene:EMLSAG00000012291 transcript:EMLSAT00000012291 description:"snap-LSalAtl2s898-processed-gene-0.60") HSP 1 Score: 63.929 bits (154), Expect = 2.026e-12 Identity = 28/55 (50.91%), Postives = 35/55 (63.64%), Query Frame = 0 Query: 73 PSSPDCSPLDYGIWGYVESKACRTPPKSVSDLKASVEEHWAAMDVDYVGKVCPAF 127 P SPD +PLDY +W +E KAC T ++ LK SV E WAAM+ Y+ VC AF Sbjct: 20 PQSPDLNPLDYSVWWQIEKKACATRHPNLDSLKVSVNEQWAAMEDHYIINVCKAF 74
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000005619 (supercontig:LSalAtl2s:LSalAtl2s301:354064:356113:1 gene:EMLSAG00000005619 transcript:EMLSAT00000005619 description:"maker-LSalAtl2s301-augustus-gene-3.7") HSP 1 Score: 65.855 bits (159), Expect = 9.852e-12 Identity = 31/79 (39.24%), Postives = 43/79 (54.43%), Query Frame = 0 Query: 275 DASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFK-CPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKK 352 +A D +LC VC + A G++F A TCE CK+FF R + C + +C V R C+ CRL+KC +GM K Sbjct: 47 EAMDPMQNQLCRVCEEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCVVDKKNRTACKACRLRKCIMVGMSK 125
BLAST of nuclear receptor nhr-48 vs. SwissProt
Match: gi|3915243|sp|O42392.1|VDR_CHICK (RecName: Full=Vitamin D3 receptor; Short=VDR; AltName: Full=1,25-dihydroxyvitamin D3 receptor; AltName: Full=Nuclear receptor subfamily 1 group I member 1) HSP 1 Score: 122.094 bits (305), Expect = 9.000e-29 Identity = 50/91 (54.95%), Postives = 68/91 (74.73%), Query Frame = 0 Query: 278 DKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKI 368 D+++ ++C VCGD+A G++FNA+TCE CK FFRR+ + F CPF+ C++T RR CQ CRLK+C DIGM KE+IL+DEE Q+KR I Sbjct: 40 DRNVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFNGDCKITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMI 130
BLAST of nuclear receptor nhr-48 vs. SwissProt
Match: gi|190411613|sp|A3RGC1.1|VDR_PIG (RecName: Full=Vitamin D3 receptor; Short=VDR; AltName: Full=1,25-dihydroxyvitamin D3 receptor; AltName: Full=Nuclear receptor subfamily 1 group I member 1) HSP 1 Score: 121.709 bits (304), Expect = 1.002e-28 Identity = 50/91 (54.95%), Postives = 67/91 (73.63%), Query Frame = 0 Query: 278 DKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKI 368 D+++ ++C VCGD+A G++FNA+TCE CK FFRR+ + F CPF+ C +T RR CQ CRLK+C DIGM KE+IL+DEE Q+KR I Sbjct: 17 DRNVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMI 107
BLAST of nuclear receptor nhr-48 vs. SwissProt
Match: gi|49036503|sp|Q95MH5.1|VDR_SAGOE (RecName: Full=Vitamin D3 receptor; Short=VDR; AltName: Full=1,25-dihydroxyvitamin D3 receptor; AltName: Full=Nuclear receptor subfamily 1 group I member 1) HSP 1 Score: 121.324 bits (303), Expect = 1.203e-28 Identity = 50/91 (54.95%), Postives = 67/91 (73.63%), Query Frame = 0 Query: 278 DKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKI 368 D+++ ++C VCGD+A G++FNA+TCE CK FFRR+ + F CPF+ C +T RR CQ CRLK+C DIGM KE+IL+DEE Q+KR I Sbjct: 17 DRNVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMI 107
BLAST of nuclear receptor nhr-48 vs. SwissProt
Match: gi|137617|sp|P11473.1|VDR_HUMAN (RecName: Full=Vitamin D3 receptor; Short=VDR; AltName: Full=1,25-dihydroxyvitamin D3 receptor; AltName: Full=Nuclear receptor subfamily 1 group I member 1) HSP 1 Score: 120.553 bits (301), Expect = 2.181e-28 Identity = 50/91 (54.95%), Postives = 67/91 (73.63%), Query Frame = 0 Query: 278 DKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKI 368 D+++ ++C VCGD+A G++FNA+TCE CK FFRR+ + F CPF+ C +T RR CQ CRLK+C DIGM KE+IL+DEE Q+KR I Sbjct: 17 DRNVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMI 107
BLAST of nuclear receptor nhr-48 vs. SwissProt
Match: gi|12643939|sp|Q9XYB7.1|NHR8_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-8) HSP 1 Score: 118.627 bits (296), Expect = 3.777e-27 Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 0 Query: 283 KLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWI 355 ++C VC D+A GYNF LTCESCKAFFRRNA K+K+ KCPFS+ C++T +R+FCQ CRL KCF +GM EW+ Sbjct: 24 RICTVCSDRANGYNFGVLTCESCKAFFRRNASKHKEIKCPFSDSCQITSASRKFCQACRLNKCFAVGMNSEWL 96
BLAST of nuclear receptor nhr-48 vs. SwissProt
Match: gi|49036100|sp|P62044.1|NR1I3_CALUR (RecName: Full=Nuclear receptor subfamily 1 group I member 3; AltName: Full=Constitutive androstane receptor; Short=CAR) HSP 1 Score: 112.079 bits (279), Expect = 5.094e-26 Identity = 50/90 (55.56%), Postives = 59/90 (65.56%), Query Frame = 0 Query: 285 CAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAK 374 C VCGD+A GY+F+ALTCE CK FFRR KN CPF+ C+V RR C CRL+KC D GMKKE ILS E Q+R K + RA+ Sbjct: 11 CMVCGDRATGYHFHALTCEGCKGFFRRTVSKNTGLTCPFAGNCKVNKAQRRHCPACRLQKCLDAGMKKEMILSAEALVQRRAKQAQRRAQ 100
BLAST of nuclear receptor nhr-48 vs. SwissProt
Match: gi|49036101|sp|P62045.1|NR1I3_PHOSI (RecName: Full=Nuclear receptor subfamily 1 group I member 3; AltName: Full=Constitutive androstane receptor; Short=CAR) HSP 1 Score: 112.079 bits (279), Expect = 5.555e-26 Identity = 50/90 (55.56%), Postives = 59/90 (65.56%), Query Frame = 0 Query: 285 CAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAK 374 C VCGD+A GY+F+ALTCE CK FFRR KN CPF+ C+V RR C CRL+KC D GMKKE ILS E Q+R K + RA+ Sbjct: 11 CMVCGDRATGYHFHALTCEGCKGFFRRTVSKNTGLTCPFAGSCKVNKAQRRHCPACRLQKCLDAGMKKEMILSAEALAQRRAKQAQRRAQ 100
BLAST of nuclear receptor nhr-48 vs. SwissProt
Match: gi|6093860|sp|O75469.1|NR1I2_HUMAN (RecName: Full=Nuclear receptor subfamily 1 group I member 2; AltName: Full=Orphan nuclear receptor PAR1; AltName: Full=Orphan nuclear receptor PXR; AltName: Full=Pregnane X receptor; AltName: Full=Steroid and xenobiotic receptor; Short=SXR) HSP 1 Score: 111.309 bits (277), Expect = 3.556e-25 Identity = 49/99 (49.49%), Postives = 67/99 (67.68%), Query Frame = 0 Query: 283 KLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPF-SNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGP 380 ++C VCGDKA GY+FN +TCE CK FFRR +N +CPF CE+T TRR CQ CRL+KC + GMKKE I+SDE +++R I+ ++++ P Sbjct: 39 QICRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEITRKTRRQCQACRLRKCLESGMKKEMIMSDEAVEERRALIKRKKSERTGTQP 137
BLAST of nuclear receptor nhr-48 vs. SwissProt
Match: gi|49036424|sp|Q8MIM3.2|NR1I3_MACMU (RecName: Full=Nuclear receptor subfamily 1 group I member 3; AltName: Full=Constitutive androstane receptor; Short=CAR) HSP 1 Score: 109.383 bits (272), Expect = 5.105e-25 Identity = 50/100 (50.00%), Postives = 66/100 (66.00%), Query Frame = 0 Query: 276 ASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKK 375 AS + ++ C VCGD+A GY+FNALTCE CK FFRR K+ CPF+ CEV+ + RR C CRL+KC D GM+K+ ILS E +R K + RA++ Sbjct: 2 ASREDELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKIQRRHCPACRLQKCLDAGMRKDMILSAEALALRRAKQAQRRAQQ 101
BLAST of nuclear receptor nhr-48 vs. SwissProt
Match: gi|10720242|sp|Q9R1A7.1|NR1I2_RAT (RecName: Full=Nuclear receptor subfamily 1 group I member 2; AltName: Full=Orphan nuclear receptor PXR; AltName: Full=Pregnane X receptor) HSP 1 Score: 109.768 bits (273), Expect = 1.085e-24 Identity = 55/125 (44.00%), Postives = 76/125 (60.80%), Query Frame = 0 Query: 252 DPLHVDQEETVETSGGKADNDSNDASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPF-SNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKK 375 +P++VD+E+ GG +++C VCGDKA GY+FN +TCE CK FFRR +N +CPF CE+T TRR CQ CRL+KC + GMKKE I+SD +Q+R I+ + +K Sbjct: 24 EPINVDEED-----GG--------------LQICRVCGDKANGYHFNVMTCEGCKGFFRRAMKRNVRLRCPFRKGTCEITRKTRRQCQACRLRKCLESGMKKEMIMSDAAVEQRRALIKRKKREK 129
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|657600340|gb|AID52831.1| (hormone receptor 96 [Tigriopus japonicus]) HSP 1 Score: 276.174 bits (705), Expect = 1.459e-81 Identity = 163/292 (55.82%), Postives = 191/292 (65.41%), Query Frame = 0 Query: 251 MDPLHVDQEETVETSGGKADNDSNDASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPG-SHENSLESPGPDLS------TGSQPPPLVFTINNDSSSLERPQARVLPSSRTPTLEDGEPLAKSPRLLDPEASSSQ-----------SSPPQFTLIKHELTTSNSPPQNPTLAPLPEAL-YVQPNLMAFEVQETQIDPSRTGFPSNEPETPGLDLTTLVP 523 MDP V +EETVET+ G+ D ++K L K CAVCGDKALGYNFNALTCESCKAFFRRNALKNK+FKCPFSNKCEVT+VTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKR KIE+NRAKKR D P S SL + L+ + F + DS LERPQARVLPSSR P+ +D +P K R PE ++S+ +S Q TLI+HELT SNSPPQ P+ +P Q N++ F VQ+ Q+ S+ P + P LT L P Sbjct: 1 MDPSIVCKEETVETTSGE-DGQKEGKTEKLLNKFCAVCGDKALGYNFNALTCESCKAFFRRNALKNKEFKCPFSNKCEVTLVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRQKIEQNRAKKRQDVPDLSPRTSLAAVASPLTLPHRDVVSPASTSISFPLGTDSIGLERPQARVLPSSRPPSEDDNQPRHKQMRYDIPEDNNSRLGVGDAYSPNDASSEQCTLIRHELTASNSPPQ-PSTTFIPTIQDRTQINMLNFVVQQPQLSSSK-DLPLDASVPPQNPLTRLSP 289
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|1316149246|ref|XP_023219759.1| (nuclear hormone receptor HR96-like isoform X1 [Centruroides sculpturatus] >gi|1316149248|ref|XP_023219760.1| nuclear hormone receptor HR96-like isoform X1 [Centruroides sculpturatus]) HSP 1 Score: 179.104 bits (453), Expect = 5.085e-46 Identity = 100/191 (52.36%), Postives = 126/191 (65.97%), Query Frame = 0 Query: 269 ADNDSNDASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESPGPDLSTGSQPPPLVFTINNDSSSLE---RPQARVLPSSRTPTLE---DGEPLAKSPRLLDPEASSSQSS 453 A+N+SN ++ KLC VCGDKA GYNFNA+TCESCKAFFRRNALK K+FKCPF C+V +VTRRFCQKCRLKKCFDIGMKKEWIL+DEEK+ KR KIEENR +KR P S + D+ S + N ++SSL +PQARV + P +E D + L S +++ S+++ Sbjct: 9 ANNNSNLEKSEA-NKLCGVCGDKAFGYNFNAITCESCKAFFRRNALKTKEFKCPFDENCKVNIVTRRFCQKCRLKKCFDIGMKKEWILTDEEKKIKRAKIEENR-QKRILNPDSKQ------LLDIELNSSN-----SCNLETSSLREVTKPQARV-TGIQQPFIESSVDSDYLNNSENIINDIIEKSENN 185
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|926638829|ref|XP_013785448.1| (nuclear hormone receptor HR96-like isoform X1 [Limulus polyphemus] >gi|1238881522|ref|XP_022253743.1| nuclear hormone receptor HR96-like isoform X1 [Limulus polyphemus] >gi|1238881524|ref|XP_022253744.1| nuclear hormone receptor HR96-like isoform X1 [Limulus polyphemus] >gi|1238881526|ref|XP_022253745.1| nuclear hormone receptor HR96-like isoform X1 [Limulus polyphemus] >gi|1238881528|ref|XP_022253746.1| nuclear hormone receptor HR96-like isoform X1 [Limulus polyphemus]) HSP 1 Score: 178.718 bits (452), Expect = 1.519e-45 Identity = 76/102 (74.51%), Postives = 88/102 (86.27%), Query Frame = 0 Query: 283 KLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHE 384 K+C VCGDKALGYNFNA+TCESCKAFFRRNA+K KDFKCPF+N C+V ++TRRFCQKCRLKKCF+IGMKKEWIL+DEEK+ K+ KIEENR K+ P E Sbjct: 15 KICGVCGDKALGYNFNAITCESCKAFFRRNAVKTKDFKCPFNNDCKVDIITRRFCQKCRLKKCFEIGMKKEWILTDEEKRMKKTKIEENRRKRYAPYPSKRE 116
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|1229694102|ref|XP_022129845.1| (nuclear hormone receptor HR96 [Pieris rapae]) HSP 1 Score: 177.948 bits (450), Expect = 1.787e-45 Identity = 81/119 (68.07%), Postives = 97/119 (81.51%), Query Frame = 0 Query: 263 ETSGGKADNDSNDASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPG 381 ET+G K + SN L K+C +CGD+ALGYNFNA++CESCKAFFRRNAL NK+FKCPFS+ CE+TVVTRRFCQKCRL+KCF +GM KE+I+SDE+K +KR KIEENRAKKR G Sbjct: 11 ETTGQKKEVPSN------LRKVCLICGDRALGYNFNAISCESCKAFFRRNALTNKEFKCPFSDNCEITVVTRRFCQKCRLEKCFAVGMVKEFIMSDEDKAEKRRKIEENRAKKRQILEG 123
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|1344801560|ref|XP_023943266.1| (nuclear hormone receptor HR96 [Bicyclus anynana]) HSP 1 Score: 177.948 bits (450), Expect = 2.304e-45 Identity = 83/127 (65.35%), Postives = 98/127 (77.17%), Query Frame = 0 Query: 251 MDPLHVDQEETVETSGGKADNDSNDASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRH 377 MD D +T + +G K D + N L K+C VCGDKALGYNFNA++CESCKAFFRRNAL NK FKCPFSN C +TV+TRRFCQKCRL+KC IGM KE+I+S+E+K +KR KIEENRAKKRH Sbjct: 1 MDTTSEDNSKTDDGNGQKKDLNVN------LQKICLVCGDKALGYNFNAISCESCKAFFRRNALVNKQFKCPFSNNCTITVLTRRFCQKCRLEKCLSIGMVKEFIMSEEDKAEKRRKIEENRAKKRH 121
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|1121149237|ref|XP_019561575.1| (PREDICTED: nuclear hormone receptor HR96-like [Aedes albopictus]) HSP 1 Score: 179.489 bits (454), Expect = 6.565e-45 Identity = 80/116 (68.97%), Postives = 93/116 (80.17%), Query Frame = 0 Query: 282 VKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESPGPDLSTG 397 VK+C+VCGDKALGYNFNA+TCESCKAFFRRNAL K F CPFS CE+TVVTRRFCQKCRL KCF IGMKKE+I+S+E+K +KR KIEENR K+ ++G GS N PG + G Sbjct: 30 VKICSVCGDKALGYNFNAMTCESCKAFFRRNALSTKGFTCPFSESCEITVVTRRFCQKCRLDKCFQIGMKKEYIMSEEDKARKRKKIEENRNKRANNGTGS-SNRANFPGGAMGGG 144
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|1000201632|gb|KXJ74037.1| (hypothetical protein RP20_CCG014509 [Aedes albopictus]) HSP 1 Score: 179.104 bits (453), Expect = 7.166e-45 Identity = 80/116 (68.97%), Postives = 93/116 (80.17%), Query Frame = 0 Query: 282 VKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESPGPDLSTG 397 VK+C+VCGDKALGYNFNA+TCESCKAFFRRNAL K F CPFS CE+TVVTRRFCQKCRL KCF IGMKKE+I+S+E+K +KR KIEENR K+ ++G GS N PG + G Sbjct: 26 VKICSVCGDKALGYNFNAMTCESCKAFFRRNALSTKGFTCPFSESCEITVVTRRFCQKCRLDKCFQIGMKKEYIMSEEDKARKRKKIEENRNKRANNGTGS-SNRANFPGGAMGGG 140
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|1121112415|ref|XP_019545918.1| (PREDICTED: nuclear hormone receptor HR96 [Aedes albopictus]) HSP 1 Score: 179.104 bits (453), Expect = 8.530e-45 Identity = 80/116 (68.97%), Postives = 93/116 (80.17%), Query Frame = 0 Query: 282 VKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESPGPDLSTG 397 VK+C+VCGDKALGYNFNA+TCESCKAFFRRNAL K F CPFS CE+TVVTRRFCQKCRL KCF IGMKKE+I+S+E+K +KR KIEENR K+ ++G GS N PG + G Sbjct: 30 VKICSVCGDKALGYNFNAMTCESCKAFFRRNALSTKGFTCPFSESCEITVVTRRFCQKCRLDKCFQIGMKKEYIMSEEDKARKRKKIEENRNKRANNGTGS-SNRANFPGGAMGGG 144
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|1247043245|gb|PCG77849.1| (hypothetical protein B5V51_6160, partial [Heliothis virescens]) HSP 1 Score: 172.17 bits (435), Expect = 1.128e-44 Identity = 80/128 (62.50%), Postives = 97/128 (75.78%), Query Frame = 0 Query: 280 SLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESPGPDLSTGSQPPPLVFTI 407 SL K+C VCGDKALGYNFNA++CESCKAFFRRNAL +K+FKCPF+N C +TVVTRRFCQKCRL+KC IGM KE+I+S+E+K +KR KIEENRA+KR P S ++ D S PL T+ Sbjct: 21 SLQKICLVCGDKALGYNFNAISCESCKAFFRRNALASKEFKCPFTNNCVITVVTRRFCQKCRLEKCLSIGMVKEFIMSEEDKAEKRRKIEENRARKRQRDPDDAVTSSKNVKRDDEGDSGLIPLQDTV 148
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|410591543|gb|AFV74663.1| (estradiol receptor-like protein 1, partial [Portunus trituberculatus]) HSP 1 Score: 166.777 bits (421), Expect = 1.181e-44 Identity = 70/100 (70.00%), Postives = 87/100 (87.00%), Query Frame = 0 Query: 276 ASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKK 375 +++ K C VCGD+ALGYNFNA+TCESCKAFFRRNALKNK+F+CPF +C V VTRRFCQKCRL+KC +IGMKKEWI+++EEK++K+ KIEENRA+K Sbjct: 2 GREETRAKKCGVCGDRALGYNFNAITCESCKAFFRRNALKNKEFRCPFQGQCRVDQVTRRFCQKCRLRKCLEIGMKKEWIMTEEEKRRKKQKIEENRARK 101 The following BLAST results are available for this feature:
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 23
Pagesback to top
BLAST of nuclear receptor nhr-48 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of nuclear receptor nhr-48 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold120_size336265:89608..102922- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold120_size336265-snap-gene-1.12 ID=maker-scaffold120_size336265-snap-gene-1.12|Name=nuclear receptor nhr-48|organism=Tigriopus kingsejongensis|type=gene|length=13315bp|location=Sequence derived from alignment at scaffold120_size336265:89608..102922- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nuclear receptor nhr-48' has the following synonyms
Add to Basket
|