run domain-containing protein partial, maker-scaffold1224_size54636-snap-gene-0.14 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of run domain-containing protein partial vs. L. salmonis genes
Match: EMLSAG00000010997 (supercontig:LSalAtl2s:LSalAtl2s73:471470:486054:-1 gene:EMLSAG00000010997 transcript:EMLSAT00000010997 description:"maker-LSalAtl2s73-augustus-gene-5.9") HSP 1 Score: 61.6178 bits (148), Expect = 7.359e-13 Identity = 38/107 (35.51%), Postives = 51/107 (47.66%), Query Frame = 0 Query: 1 MAVLQLTALSQFGC---GSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVDCLTDTDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGLDQVS 104 MA LQ+ A SQFGC S+ F ++C+TDTD ++ + PE L SP VT I R+EL+ AIRDLMQHG+ +V+ Sbjct: 358 MAXLQIAATSQFGCSAMNSQQF---------------------------------QIECITDTDCTSIVSSENPETLIDSPRVTQIVRRELSVAIRDLMQHGMIEVN 431
BLAST of run domain-containing protein partial vs. SwissProt
Match: gi|123789361|sp|Q0VDN7.1|RUND1_MOUSE (RecName: Full=RUN domain-containing protein 1) HSP 1 Score: 49.2914 bits (116), Expect = 6.328e-7 Identity = 33/101 (32.67%), Postives = 50/101 (49.50%), Query Frame = 0 Query: 1 MAVLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLD-ACSHVDCLTDTDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGL 100 +AVLQ+ +SQ GC + + +R+ Y L LE++VD + A H D + A +Q L +T++ RKEL A+RDL+ HGL Sbjct: 348 LAVLQIFTVSQLGCATGQIPQTLWQRSQADRDYSHLLKRLEVSVDRVKQLALRH----QPHDHVITSANLQDLSLGGKDELTTVVRKELTVAVRDLLAHGL 444
BLAST of run domain-containing protein partial vs. SwissProt
Match: gi|296452974|sp|Q96C34.3|RUND1_HUMAN (RecName: Full=RUN domain-containing protein 1) HSP 1 Score: 48.9062 bits (115), Expect = 7.040e-7 Identity = 35/104 (33.65%), Postives = 48/104 (46.15%), Query Frame = 0 Query: 1 MAVLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHM----LDACSHVDCLTDTDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGL 100 +AVLQ+ A+SQFGC + +R Y L LE++VD + L H +T A +Q L +T RKEL A+RDL+ HGL Sbjct: 346 LAVLQIFAVSQFGCATGQIPPTLWQRVQADRDYSPLLKRLEVSVDRVKQLALRQQPHDHVITS-------ANLQDLSLGGKDELTMAVRKELTVAVRDLLAHGL 442
BLAST of run domain-containing protein partial vs. nr
Match: gi|1228011222|ref|XP_021937539.1| (RUN domain-containing protein 1 [Zootermopsis nevadensis]) HSP 1 Score: 98.5969 bits (244), Expect = 7.609e-22 Identity = 53/98 (54.08%), Postives = 73/98 (74.49%), Query Frame = 0 Query: 3 VLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVDCLTDTDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGL 100 +LQ+ A++QFGCGS+HF KNTLK+T K NH+GDLRA+LELAV+ +++ S+ + D+D + S++E P L L TS RK+LA +IRDLMQHGL Sbjct: 243 MLQIFAVAQFGCGSDHFKKNTLKKTMKANHWGDLRANLELAVECVIELASNPENTLDSDYT-SDSEDAPVVLCNVKL-TSAVRKQLALSIRDLMQHGL 338
BLAST of run domain-containing protein partial vs. nr
Match: gi|646698624|gb|KDR09703.1| (RUN domain-containing protein 1, partial [Zootermopsis nevadensis]) HSP 1 Score: 98.2117 bits (243), Expect = 7.951e-22 Identity = 53/98 (54.08%), Postives = 73/98 (74.49%), Query Frame = 0 Query: 3 VLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVDCLTDTDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGL 100 +LQ+ A++QFGCGS+HF KNTLK+T K NH+GDLRA+LELAV+ +++ S+ + D+D + S++E P L L TS RK+LA +IRDLMQHGL Sbjct: 220 MLQIFAVAQFGCGSDHFKKNTLKKTMKANHWGDLRANLELAVECVIELASNPENTLDSDYT-SDSEDAPVVLCNVKL-TSAVRKQLALSIRDLMQHGL 315
BLAST of run domain-containing protein partial vs. nr
Match: gi|961116888|ref|XP_014781080.1| (PREDICTED: RUN domain-containing protein 1-like [Octopus bimaculoides] >gi|918303509|gb|KOF76309.1| hypothetical protein OCBIM_22033481mg [Octopus bimaculoides]) HSP 1 Score: 98.2117 bits (243), Expect = 1.180e-21 Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 0 Query: 1 MAVLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVDCL----TDTDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGL 100 +A+LQ+ A++Q GCG++ F KN LKRT KGNH+GDLRA LE++++ +L + + L +D D S S+ + P+ +SP VT R+ELA +IRDLMQHGL Sbjct: 306 LALLQVFAITQLGCGTQEFQKNLLKRTTKGNHWGDLRAQLEISINKVLKVAAEEEILIPNSSDFD-SESDEDPLPQ---SSPAVTQAVRRELAMSIRDLMQHGL 405
BLAST of run domain-containing protein partial vs. nr
Match: gi|1242741806|ref|XP_022338537.1| (RUN domain-containing protein 1-like isoform X2 [Crassostrea virginica]) HSP 1 Score: 96.6709 bits (239), Expect = 3.598e-21 Identity = 45/103 (43.69%), Postives = 68/103 (66.02%), Query Frame = 0 Query: 1 MAVLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVDCLTDTDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGLDQV 103 +A+LQ+ ++QFGCG+ F +N +K+T KGNH+GDLRA LELA++ L+ + D S +++ + +SP +T RK+LA AIRDLMQHGL ++ Sbjct: 315 LAILQMFIITQFGCGTGEFKRNMMKKTTKGNHWGDLRARLELAINKTLELAQKQEEEPREDQSEYDSDSEEGQEHSSPALTQCVRKDLAMAIRDLMQHGLMEI 417
BLAST of run domain-containing protein partial vs. nr
Match: gi|1242741808|ref|XP_022338546.1| (RUN domain-containing protein 1-like isoform X3 [Crassostrea virginica]) HSP 1 Score: 96.2857 bits (238), Expect = 3.706e-21 Identity = 45/100 (45.00%), Postives = 66/100 (66.00%), Query Frame = 0 Query: 1 MAVLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVDCLTDTDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGL 100 +A+LQ+ ++QFGCG+ F +N +K+T KGNH+GDLRA LELA++ L+ + D S +++ + +SP +T RK+LA AIRDLMQHGL Sbjct: 315 LAILQMFIITQFGCGTGEFKRNMMKKTTKGNHWGDLRARLELAINKTLELAQKQEEEPREDQSEYDSDSEEGQEHSSPALTQCVRKDLAMAIRDLMQHGL 414
BLAST of run domain-containing protein partial vs. nr
Match: gi|1242741800|ref|XP_022338513.1| (RUN domain-containing protein 1-like isoform X1 [Crassostrea virginica] >gi|1242741802|ref|XP_022338519.1| RUN domain-containing protein 1-like isoform X1 [Crassostrea virginica] >gi|1242741804|ref|XP_022338529.1| RUN domain-containing protein 1-like isoform X1 [Crassostrea virginica]) HSP 1 Score: 96.6709 bits (239), Expect = 4.481e-21 Identity = 45/103 (43.69%), Postives = 68/103 (66.02%), Query Frame = 0 Query: 1 MAVLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVDCLTDTDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGLDQV 103 +A+LQ+ ++QFGCG+ F +N +K+T KGNH+GDLRA LELA++ L+ + D S +++ + +SP +T RK+LA AIRDLMQHGL ++ Sbjct: 312 LAILQMFIITQFGCGTGEFKRNMMKKTTKGNHWGDLRARLELAINKTLELAQKQEEEPREDQSEYDSDSEEGQEHSSPALTQCVRKDLAMAIRDLMQHGLMEI 414
BLAST of run domain-containing protein partial vs. nr
Match: gi|405965543|gb|EKC30909.1| (RUN domain-containing protein 1 [Crassostrea gigas]) HSP 1 Score: 95.9005 bits (237), Expect = 7.124e-21 Identity = 44/103 (42.72%), Postives = 68/103 (66.02%), Query Frame = 0 Query: 1 MAVLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVDCLTDTDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGLDQV 103 +A+LQ+ ++QFGCG+ F +N +K+T KGNH+GDLRA LELA++ L+ + D S ++ + ++SP +T RK+LA A+RDLMQHGL ++ Sbjct: 304 LAILQMFIITQFGCGAGEFKRNMMKKTTKGNHWGDLRARLELAINKTLELAQKQEEEPQDDQSEFGSDSEESQEQSSPALTQCVRKDLAMAVRDLMQHGLMEI 406
BLAST of run domain-containing protein partial vs. nr
Match: gi|762090252|ref|XP_011427499.1| (PREDICTED: RUN domain-containing protein 1 [Crassostrea gigas] >gi|762090254|ref|XP_011427500.1| PREDICTED: RUN domain-containing protein 1 [Crassostrea gigas]) HSP 1 Score: 95.9005 bits (237), Expect = 7.309e-21 Identity = 44/103 (42.72%), Postives = 68/103 (66.02%), Query Frame = 0 Query: 1 MAVLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVDCLTDTDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGLDQV 103 +A+LQ+ ++QFGCG+ F +N +K+T KGNH+GDLRA LELA++ L+ + D S ++ + ++SP +T RK+LA A+RDLMQHGL ++ Sbjct: 310 LAILQMFIITQFGCGAGEFKRNMMKKTTKGNHWGDLRARLELAINKTLELAQKQEEEPQDDQSEFGSDSEESQEQSSPALTQCVRKDLAMAVRDLMQHGLMEI 412
BLAST of run domain-containing protein partial vs. nr
Match: gi|1339046324|ref|XP_023711316.1| (RUN domain-containing protein 1-like [Cryptotermes secundus] >gi|1330906013|gb|PNF29920.1| RUN domain-containing protein 1 [Cryptotermes secundus]) HSP 1 Score: 93.9745 bits (232), Expect = 3.117e-20 Identity = 51/99 (51.52%), Postives = 70/99 (70.71%), Query Frame = 0 Query: 2 AVLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVDCLTDTDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGL 100 A+LQ+ ++QFGCG+E F +N LK+T K NH+GDLRA+LELAV+H+++ S+ + D D + S++E P L L TS RK LA +IRDLMQHGL Sbjct: 297 ALLQIFDVAQFGCGNEQFKRNALKKTMKANHWGDLRANLELAVEHVIELASNPENTLDNDYT-SDSEGAPVVLCNVKL-TSAVRKRLAVSIRDLMQHGL 393
BLAST of run domain-containing protein partial vs. nr
Match: gi|1207924170|ref|XP_021351124.1| (RUN domain-containing protein 1-like isoform X3 [Mizuhopecten yessoensis]) HSP 1 Score: 93.5893 bits (231), Expect = 5.286e-20 Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 0 Query: 1 MAVLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVDCLTD-----TDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGLDQV 103 + VLQ+ LSQFGCGS F +N LK+T KGNH+GDLRA LE+AV + + D D S++E E +SP +T + RK+L+ AIRDLMQHGL ++ Sbjct: 315 ITVLQMFLLSQFGCGSRDFQRNVLKKTTKGNHWGDLRARLEVAVAKVAELAKEQQDEKDLRQENQDEYGSDSEESQEQ--SSPALTQVVRKDLSMAIRDLMQHGLMEI 420 The following BLAST results are available for this feature:
BLAST of run domain-containing protein partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of run domain-containing protein partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 2
BLAST of run domain-containing protein partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1224_size54636:53371..54056+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1224_size54636-snap-gene-0.14 ID=maker-scaffold1224_size54636-snap-gene-0.14|Name=run domain-containing protein partial|organism=Tigriopus kingsejongensis|type=gene|length=686bp|location=Sequence derived from alignment at scaffold1224_size54636:53371..54056+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'run domain-containing protein partial' has the following synonyms
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