run domain-containing protein partial, maker-scaffold1224_size54636-snap-gene-0.14 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of run domain-containing protein partial vs. L. salmonis genes
Match: EMLSAG00000010997 (supercontig:LSalAtl2s:LSalAtl2s73:471470:486054:-1 gene:EMLSAG00000010997 transcript:EMLSAT00000010997 description:"maker-LSalAtl2s73-augustus-gene-5.9") HSP 1 Score: 61.6178 bits (148), Expect = 7.359e-13 Identity = 38/107 (35.51%), Postives = 51/107 (47.66%), Query Frame = 0 Query: 1 MAVLQLTALSQFGC---GSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVDCLTDTDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGLDQVS 104 MA LQ+ A SQFGC S+ F ++C+TDTD ++ + PE L SP VT I R+EL+ AIRDLMQHG+ +V+ Sbjct: 358 MAXLQIAATSQFGCSAMNSQQF---------------------------------QIECITDTDCTSIVSSENPETLIDSPRVTQIVRRELSVAIRDLMQHGMIEVN 431
BLAST of run domain-containing protein partial vs. SwissProt
Match: gi|123789361|sp|Q0VDN7.1|RUND1_MOUSE (RecName: Full=RUN domain-containing protein 1) HSP 1 Score: 49.2914 bits (116), Expect = 6.328e-7 Identity = 33/101 (32.67%), Postives = 50/101 (49.50%), Query Frame = 0 Query: 1 MAVLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLD-ACSHVDCLTDTDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGL 100 +AVLQ+ +SQ GC + + +R+ Y L LE++VD + A H D + A +Q L +T++ RKEL A+RDL+ HGL Sbjct: 348 LAVLQIFTVSQLGCATGQIPQTLWQRSQADRDYSHLLKRLEVSVDRVKQLALRH----QPHDHVITSANLQDLSLGGKDELTTVVRKELTVAVRDLLAHGL 444
BLAST of run domain-containing protein partial vs. SwissProt
Match: gi|296452974|sp|Q96C34.3|RUND1_HUMAN (RecName: Full=RUN domain-containing protein 1) HSP 1 Score: 48.9062 bits (115), Expect = 7.040e-7 Identity = 35/104 (33.65%), Postives = 48/104 (46.15%), Query Frame = 0 Query: 1 MAVLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHM----LDACSHVDCLTDTDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGL 100 +AVLQ+ A+SQFGC + +R Y L LE++VD + L H +T A +Q L +T RKEL A+RDL+ HGL Sbjct: 346 LAVLQIFAVSQFGCATGQIPPTLWQRVQADRDYSPLLKRLEVSVDRVKQLALRQQPHDHVITS-------ANLQDLSLGGKDELTMAVRKELTVAVRDLLAHGL 442
BLAST of run domain-containing protein partial vs. nr
Match: gi|1207924172|ref|XP_021351125.1| (RUN domain-containing protein 1-like isoform X4 [Mizuhopecten yessoensis] >gi|1205904006|gb|OWF51613.1| RUN domain-containing protein 1 [Mizuhopecten yessoensis]) HSP 1 Score: 93.5893 bits (231), Expect = 5.330e-20 Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 0 Query: 1 MAVLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVDCLTD-----TDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGLDQV 103 + VLQ+ LSQFGCGS F +N LK+T KGNH+GDLRA LE+AV + + D D S++E E +SP +T + RK+L+ AIRDLMQHGL ++ Sbjct: 313 ITVLQMFLLSQFGCGSRDFQRNVLKKTTKGNHWGDLRARLEVAVAKVAELAKEQQDEKDLRQENQDEYGSDSEESQEQ--SSPALTQVVRKDLSMAIRDLMQHGLMEI 418
BLAST of run domain-containing protein partial vs. nr
Match: gi|1207924168|ref|XP_021351122.1| (RUN domain-containing protein 1-like isoform X2 [Mizuhopecten yessoensis]) HSP 1 Score: 93.2041 bits (230), Expect = 5.718e-20 Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 0 Query: 1 MAVLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVDCLTD-----TDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGLDQV 103 + VLQ+ LSQFGCGS F +N LK+T KGNH+GDLRA LE+AV + + D D S++E E +SP +T + RK+L+ AIRDLMQHGL ++ Sbjct: 316 ITVLQMFLLSQFGCGSRDFQRNVLKKTTKGNHWGDLRARLEVAVAKVAELAKEQQDEKDLRQENQDEYGSDSEESQEQ--SSPALTQVVRKDLSMAIRDLMQHGLMEI 421
BLAST of run domain-containing protein partial vs. nr
Match: gi|1207924166|ref|XP_021351121.1| (RUN domain-containing protein 1-like isoform X1 [Mizuhopecten yessoensis]) HSP 1 Score: 93.2041 bits (230), Expect = 5.782e-20 Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 0 Query: 1 MAVLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVDCLTD-----TDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGLDQV 103 + VLQ+ LSQFGCGS F +N LK+T KGNH+GDLRA LE+AV + + D D S++E E +SP +T + RK+L+ AIRDLMQHGL ++ Sbjct: 318 ITVLQMFLLSQFGCGSRDFQRNVLKKTTKGNHWGDLRARLEVAVAKVAELAKEQQDEKDLRQENQDEYGSDSEESQEQ--SSPALTQVVRKDLSMAIRDLMQHGLMEI 423
BLAST of run domain-containing protein partial vs. nr
Match: gi|524916104|ref|XP_005112834.1| (PREDICTED: RUN domain-containing protein 1-like [Aplysia californica]) HSP 1 Score: 92.0485 bits (227), Expect = 1.454e-19 Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 0 Query: 1 MAVLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVDCL----TDTDVSASEAEVQPEHL-RASPLVTSIARKELAPAIRDLMQHGLDQV 103 + VLQ+ +S GCGS F +N LK+T +GNH+GDLRA LE+AV +D TDTD +S+++ EH+ ++SP +T RKELA +IRDLM+HGL +V Sbjct: 331 LTVLQIYVISHLGCGSRDFKRNLLKKTTRGNHWGDLRAKLEMAVTRCIDLAEQQKLEAKQDTDTDEYSSDSD---EHVHQSSPALTQCVRKELAMSIRDLMEHGLMEV 435
BLAST of run domain-containing protein partial vs. nr
Match: gi|1316141916|ref|XP_023215929.1| (RUN domain-containing protein 1-like [Centruroides sculpturatus]) HSP 1 Score: 88.1965 bits (217), Expect = 3.861e-19 Identity = 44/99 (44.44%), Postives = 70/99 (70.71%), Query Frame = 0 Query: 3 VLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVD-CLTDTDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGL 100 +LQ+ A++QFGCGS F +N LK+T KG+H+GDLRA LE+ ++ +++ + + D+D + S++E P ++ + +T+ RK+LA AIRDLMQHGL Sbjct: 2 LLQMFAITQFGCGSRAFERNMLKKTTKGSHWGDLRAQLEIIINQVIELVENQEPPFEDSDYT-SDSEDAPV-IQCNEKLTTAVRKDLAAAIRDLMQHGL 98
BLAST of run domain-containing protein partial vs. nr
Match: gi|908494385|ref|XP_013096537.1| (PREDICTED: RUN domain-containing protein 1-like [Biomphalaria glabrata] >gi|908494388|ref|XP_013096538.1| PREDICTED: RUN domain-containing protein 1-like [Biomphalaria glabrata]) HSP 1 Score: 89.7373 bits (221), Expect = 1.090e-18 Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = 0 Query: 1 MAVLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVDCLT--DTDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGL 100 + +LQ+ +SQ GCGS F +N LK+T KGNH+GDLRA LE+AV ++ + DTD + + ++SP +T RK+LA A+RDLMQHGL Sbjct: 328 LTILQIYVISQLGCGSRDFKRNLLKKTAKGNHWGDLRAKLEMAVTRCIELAEEQKSKSKQDTDSEDYSSGSDEQENQSSPELTQCVRKDLAMALRDLMQHGL 429
BLAST of run domain-containing protein partial vs. nr
Match: gi|957849252|ref|XP_014675154.1| (PREDICTED: RUN domain-containing protein 1-like isoform X1 [Priapulus caudatus] >gi|957849254|ref|XP_014675155.1| PREDICTED: RUN domain-containing protein 1-like isoform X1 [Priapulus caudatus]) HSP 1 Score: 89.7373 bits (221), Expect = 1.233e-18 Identity = 47/102 (46.08%), Postives = 71/102 (69.61%), Query Frame = 0 Query: 3 VLQLTALSQFGCGS-EHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVDCLTDTDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGLDQV 103 +LQ+ ++QFGC S +F KN LK+T KGNH+GD+RA LELAVD+++ S + D+D ++ + P ++ LV+++ RK+LA AIRDLMQHGL ++ Sbjct: 306 ILQMLLVNQFGCASMNNFRKNELKKTTKGNHWGDMRARLELAVDYVIQLTSAQEQHADSDYTSDDDA--PAYVCNEALVSAV-RKDLAGAIRDLMQHGLMEI 404
BLAST of run domain-containing protein partial vs. nr
Match: gi|443691591|gb|ELT93405.1| (hypothetical protein CAPTEDRAFT_183187 [Capitella teleta]) HSP 1 Score: 88.1965 bits (217), Expect = 3.386e-18 Identity = 52/106 (49.06%), Postives = 67/106 (63.21%), Query Frame = 0 Query: 1 MAVLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLD---ACSHVDCLTDTDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGLDQV 103 + VLQ+ A+SQFGCG F N LKRT KGNH+GDLRA LE+A+ + D C DTD + S++E P LV ++ RKELA A+RDL+QHGL +V Sbjct: 275 LTVLQIFAISQFGCGGREFQHNLLKRTTKGNHWGDLRARLEIAIAKVTDLALKCPQTPN-EDTDYT-SDSEDTPAIQCNQELVAAV-RKELAMALRDLLQHGLMEV 377
BLAST of run domain-containing protein partial vs. nr
Match: gi|1009567527|ref|XP_015916151.1| (RUN domain-containing protein 1 [Parasteatoda tepidariorum] >gi|1192750627|ref|XP_021004482.1| RUN domain-containing protein 1 [Parasteatoda tepidariorum]) HSP 1 Score: 87.4261 bits (215), Expect = 7.511e-18 Identity = 44/100 (44.00%), Postives = 67/100 (67.00%), Query Frame = 0 Query: 1 MAVLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVDCLTDTDVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGL 100 + +LQ+ ++QFGCG +F KNTLK++ KGNH+GDLRA LE+AV + ++ + + S++E P ++ + +T+ RK+LA AIRDLMQHGL Sbjct: 293 LTLLQVFTITQFGCGRNNFQKNTLKKSDKGNHWGDLRAKLEVAVSDVENSVLEREPPCEDSDYTSDSEDTP-VVQCNEKLTTAVRKDLASAIRDLMQHGL 391
BLAST of run domain-containing protein partial vs. nr
Match: gi|954377657|gb|KRY43490.1| (RUN domain-containing protein 1 [Trichinella spiralis]) HSP 1 Score: 86.6557 bits (213), Expect = 1.412e-17 Identity = 42/104 (40.38%), Postives = 66/104 (63.46%), Query Frame = 0 Query: 2 AVLQLTALSQFGCGSEHFSKNTLKRTPKGNHYGDLRAHLELAVDHMLDACSHVDCLTDT-----DVSASEAEVQPEHLRASPLVTSIARKELAPAIRDLMQHGL 100 VLQ+ LSQ GC S F +N LK + KG+H+GDLRA LE++++ M++ C D +D ++ S++EV E + ++ ++ R+ L PA+RDL+QHGL Sbjct: 306 TVLQVYILSQLGCQSRRFRRNALKNSFKGSHWGDLRAALEISINEMVEICEQYDLSSDAGANRRSLTMSQSEVTMEEICPREILRAV-RRNLCPALRDLLQHGL 408 The following BLAST results are available for this feature:
BLAST of run domain-containing protein partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of run domain-containing protein partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 2
BLAST of run domain-containing protein partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1224_size54636:53371..54056+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1224_size54636-snap-gene-0.14 ID=maker-scaffold1224_size54636-snap-gene-0.14|Name=run domain-containing protein partial|organism=Tigriopus kingsejongensis|type=gene|length=686bp|location=Sequence derived from alignment at scaffold1224_size54636:53371..54056+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'run domain-containing protein partial' has the following synonyms
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