AGAP009769-PA, maker-scaffold124_size330879-snap-gene-2.10 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of AGAP009769-PA vs. L. salmonis genes
Match: EMLSAG00000009163 (supercontig:LSalAtl2s:LSalAtl2s577:92059:93975:-1 gene:EMLSAG00000009163 transcript:EMLSAT00000009163 description:"maker-LSalAtl2s577-augustus-gene-1.7") HSP 1 Score: 58.5362 bits (140), Expect = 9.601e-10 Identity = 51/144 (35.42%), Postives = 65/144 (45.14%), Query Frame = 0 Query: 122 IFASVIALVLLMNVCIGQEGPSEIPNVTSNSREGKLFPIFQIVQFPN-----------------------TACQGASSRNGTCYTLSLACGSTSSENCTYLTQTSTTANTISPCTYTICPCDSNVCRIRFDFDSFQIAEQTVGT 242 +F + V LM V IG E ++S E +L IF IV+F N TA +S GTC + CG T +EN T L +S T + CTYTIC C NVCRIR DF +F ++ TV T Sbjct: 20 VFFKDASFVFLM-VWIGVLKIGESMEISSERGE-RL--IFNIVKFQNLPCGTTTNTGTCYTADECASRGGTAGGACASGYGTCCMFTADCGGTITENSTLLEISSRTTD----CTYTICRCSDNVCRIRLDFMTFVLSGPTVST 155
BLAST of AGAP009769-PA vs. L. salmonis genes
Match: EMLSAG00000001870 (supercontig:LSalAtl2s:LSalAtl2s1321:64989:68237:-1 gene:EMLSAG00000001870 transcript:EMLSAT00000001870 description:"maker-LSalAtl2s1321-augustus-gene-0.18") HSP 1 Score: 57.7658 bits (138), Expect = 1.089e-9 Identity = 41/111 (36.94%), Postives = 51/111 (45.95%), Query Frame = 0 Query: 158 FPIFQIVQFPNTAC---QGASS-RNGTCYTLS-------------------------LACGSTSSENCTYLTQTS--TTANTISPCTYTICPCDSNVCRIRFDFDSFQIAE 237 F +F +VQF NT C GAS RNGTC S CGS + ENCTY+ T ++PC+YTI C +NVCR+R DF+ F E Sbjct: 1 FSLFSVVQFRNTVCAIGSGASRIRNGTCLKQSECADRGGSGRANCASGFGVCCFFAIQTCGSVARENCTYIQNPGFPTPYRVLTPCSYTIQRCSNNVCRLRLDFEMFTTFE 111
BLAST of AGAP009769-PA vs. L. salmonis genes
Match: EMLSAG00000011908 (supercontig:LSalAtl2s:LSalAtl2s83:643787:645943:-1 gene:EMLSAG00000011908 transcript:EMLSAT00000011908 description:"maker-LSalAtl2s83-augustus-gene-6.23") HSP 1 Score: 56.6102 bits (135), Expect = 3.635e-9 Identity = 34/114 (29.82%), Postives = 50/114 (43.86%), Query Frame = 0 Query: 146 PNVTSNSREGKLFPIFQIVQFPNTACQGASSRNGTCYTLSLACGSTSSENCTYLTQTSTTANTISPCTYTICPCDSNVCRIRFDFDSFQIAEQTVGTAVLVGVPAVQNNATHLQ 259 P T ++ G + + T +S G C + +CG TS+ENCTY + C ICPC N+C++R DF +F I + T + VG A T+ Q Sbjct: 99 PXSTGDNTNGTCYTTDECTARGGTPSGDCASGXGVCCVFTFSCGQTSAENCTYFIGQNVPD---GQCRLEICPCSDNICQLRLDFTTFDITGPSTNT-ISVGKNAALKEVTNEQ 208
BLAST of AGAP009769-PA vs. L. salmonis genes
Match: EMLSAG00000004321 (supercontig:LSalAtl2s:LSalAtl2s227:153019:155658:-1 gene:EMLSAG00000004321 transcript:EMLSAT00000004321 description:"maker-LSalAtl2s227-snap-gene-1.26") HSP 1 Score: 52.373 bits (124), Expect = 7.334e-8 Identity = 27/54 (50.00%), Postives = 35/54 (64.81%), Query Frame = 0 Query: 192 SSENCTYLTQTSTTANT---ISPCTYTICPCDSNVCRIRFDFDSFQIAEQTVGT 242 S+ NCTYL QTS T+ T ++PCTYTIC C S CR+R F + +A +GT Sbjct: 2 SNANCTYLEQTSITSATSLSMNPCTYTICKCSSEACRLRLXFTTNILALPVIGT 55
BLAST of AGAP009769-PA vs. L. salmonis genes
Match: EMLSAG00000009716 (supercontig:LSalAtl2s:LSalAtl2s627:172122:174346:-1 gene:EMLSAG00000009716 transcript:EMLSAT00000009716 description:"maker-LSalAtl2s627-augustus-gene-1.20") HSP 1 Score: 49.6766 bits (117), Expect = 4.782e-7 Identity = 32/106 (30.19%), Postives = 49/106 (46.23%), Query Frame = 0 Query: 145 IPNVTSNSREGKLFPIFQIVQFPNTACQGASSR-----NGTCYTLSLACGSTSSE----------NCTYLTQTSTTANTISPCTYTICPCDSNVCRIRFDFDSFQI 235 IP + + ++ +L + +V F N+AC ASS GTC++ CG+ C T T+ T + + CTY + P +CRIR DF +F I Sbjct: 24 IPCMAAAPKDARLISLLNVVTFQNSACAAASSTVSNPIQGTCFSAG-ECGAMGGRVDGTCASGFGACCVFTLTACTGSIANNCTYIMNPGSPGICRIRLDFQNFVI 128
BLAST of AGAP009769-PA vs. nr
Match: gi|1325295901|ref|XP_023330828.1| (uncharacterized protein LOC111703186 [Eurytemora affinis]) HSP 1 Score: 88.1965 bits (217), Expect = 1.392e-15 Identity = 50/120 (41.67%), Postives = 68/120 (56.67%), Query Frame = 0 Query: 143 SEIPNVT-SNSREGKLFPIFQIVQFPNTACQGASSRNGTCYT------------------------LSLACGSTSSENCTY-LTQTSTTANTISPCTYTICPCDSNVCRIRFDFDSFQIA 236 SE+ T + R GKL IF +++FPN C G+ NGTCYT S+ACG+T S+N TY + + T A T SPCTYTICPC++N+C++R DF++F IA Sbjct: 39 SEVNQTTQATDRNGKL--IFSVIRFPNAPCVGSGGFNGTCYTASECSAKGGSSSLTCASGFGVCCVFSMACGTTISQNNTYHIISSFTAATTASPCTYTICPCNTNICKLRLDFETFSIA 156
BLAST of AGAP009769-PA vs. nr
Match: gi|1325333826|ref|XP_023348755.1| (uncharacterized protein LOC111717490, partial [Eurytemora affinis]) HSP 1 Score: 81.6481 bits (200), Expect = 7.141e-15 Identity = 44/115 (38.26%), Postives = 61/115 (53.04%), Query Frame = 0 Query: 147 NVTSNSREGKLFPIFQIVQFPNTACQGASSRNGTCYT------------------------LSLACGSTSSENCTY-LTQTSTTANTISPCTYTICPCDSNVCRIRFDFDSFQIA 236 N R+GK +FQ+V+FPN C G+ NGTCYT S++CGST S+N TY + T SPCTYT+CP ++N+C+IR DF++F I+ Sbjct: 23 NEPGKDRQGKFAGVFQVVRFPNANCLGSGGLNGTCYTESECTAKGGSASISCAAGFGICCIFSMSCGSTISQNNTYHVISNFNTVTDPSPCTYTVCPLNNNICKIRLDFETFTIS 137
BLAST of AGAP009769-PA vs. nr
Match: gi|1325334810|ref|XP_023349221.1| (uncharacterized protein LOC111717987 [Eurytemora affinis]) HSP 1 Score: 78.1814 bits (191), Expect = 3.442e-12 Identity = 44/115 (38.26%), Postives = 66/115 (57.39%), Query Frame = 0 Query: 147 NVTSNSREGKLFPIFQIVQFPNTACQGASSRNGTCYT------------------------LSLACGSTSSENCTY-LTQTSTTANTISPCTYTICPCDSNVCRIRFDFDSFQIA 236 + +S++R GKL +F +V+FPN+AC G +S NGTCYT S++CG++SSEN TY + T +T+ PC YT C ++N+C++R DF+SF A Sbjct: 34 STSSSARGGKL--VFNVVRFPNSACSGTNSLNGTCYTASECSSKSGTAAGSCASGFGVCCTFSISCGTSSSENNTYAIISTYSTSTDSDPCIYTFCRRNANICKLRIDFESFTTA 146
BLAST of AGAP009769-PA vs. nr
Match: gi|156541801|ref|XP_001602445.1| (PREDICTED: uncharacterized protein LOC100118488 [Nasonia vitripennis]) HSP 1 Score: 71.633 bits (174), Expect = 4.431e-10 Identity = 51/169 (30.18%), Postives = 80/169 (47.34%), Query Frame = 0 Query: 126 VIALVLLMNVCIGQEGPS------EIPNVTSNSREGKLFPIFQIVQFPNTACQGASSRNGTCYT------------------------LSLACGSTSSENCTYLTQTS--TTANTISPCTYTICPCDSNVCRIRFDFDSFQIAEQTVGTAVLVGVPAVQNNATHLQDQC 262 V+AL+ L V GQ GP+ E +V R+ + FP+F +V+FPN+ C ++S NGTC+T +CG+T++ N TY T S TT + C T+ C+SN+C++R DF F +A+ T + +V A+ + C Sbjct: 7 VVALIAL-TVTSGQHGPTLDYSTDEPRDVGVLQRQKRFFPLFSVVRFPNSPCTASNSFNGTCFTKRECAHQGGTAFGTCANGFGVCCLFQKSCGTTTNVNNTYFTNPSYPTTYDGGDRCVITVKRCNSNICQLRLDFLDFTLAQPTADGVCDFDLLSVSGGASRVPRIC 174
BLAST of AGAP009769-PA vs. nr
Match: gi|1325311639|ref|XP_023337446.1| (uncharacterized protein LOC111708343 [Eurytemora affinis]) HSP 1 Score: 71.633 bits (174), Expect = 4.873e-10 Identity = 43/110 (39.09%), Postives = 62/110 (56.36%), Query Frame = 0 Query: 148 VTSNSREGKLFPIFQIVQFPNTACQGASSRNGTCY------------------------TLSLACGSTSSENCTYLTQTS-TTANTISPCTYTICPCDSNVCRIRFDFDS 232 T+++R GK IF +V+FPN AC G++ NGTCY T S+ACG+TSSEN TY +S +T+ +PC YT C ++N+C++R DF+S Sbjct: 32 TTTSTRGGK--AIFNVVRFPNDACIGSNKFNGTCYTASECSSKSGTAAGACASGFGVCCTFSIACGATSSENNTYAVISSYSTSVDANPCIYTFCRQNANICKLRIDFES 139
BLAST of AGAP009769-PA vs. nr
Match: gi|808148914|ref|XP_012175430.1| (uncharacterized protein LOC100646249 isoform X2 [Bombus terrestris]) HSP 1 Score: 67.3958 bits (163), Expect = 9.954e-9 Identity = 41/142 (28.87%), Postives = 69/142 (48.59%), Query Frame = 0 Query: 121 EIFASVIALVLLMNVCIGQEGPSEIPNVTSNSREGKLFPIFQIVQFPNTACQGASSRNGTCYT------------------------LSLACGSTSSENCTYLT--QTSTTANTISPCTYTICPCDSNVCRIRFDFDSFQIA 236 E + ++ V +++ + + +EIPN S G+ FP+F +++F N+ C +++ NGTC+T CGST++ N TY T + TT CT T+ C+SN+C++R DF F +A Sbjct: 4 EAYLTIFLFVNIVSYKLDNDDITEIPNSMS---RGRFFPLFSVIRFANSQCLASNNLNGTCFTRRECRNYGGIPSGSCANGHGICCVFQKTCGSTTNVNNTYFTNPEYPTTYERQGRCTITVQRCNSNICQLRLDFLEFNLA 142
BLAST of AGAP009769-PA vs. nr
Match: gi|340730191|ref|XP_003403369.1| (uncharacterized protein LOC100646249 isoform X1 [Bombus terrestris]) HSP 1 Score: 67.3958 bits (163), Expect = 1.072e-8 Identity = 41/142 (28.87%), Postives = 69/142 (48.59%), Query Frame = 0 Query: 121 EIFASVIALVLLMNVCIGQEGPSEIPNVTSNSREGKLFPIFQIVQFPNTACQGASSRNGTCYT------------------------LSLACGSTSSENCTYLT--QTSTTANTISPCTYTICPCDSNVCRIRFDFDSFQIA 236 E + ++ V +++ + + +EIPN S G+ FP+F +++F N+ C +++ NGTC+T CGST++ N TY T + TT CT T+ C+SN+C++R DF F +A Sbjct: 4 EAYLTIFLFVNIVSYKLDNDDITEIPNSMS---RGRFFPLFSVIRFANSQCLASNNLNGTCFTRRECRNYGGIPSGSCANGHGICCVFQKTCGSTTNVNNTYFTNPEYPTTYERQGRCTITVQRCNSNICQLRLDFLEFNLA 142
BLAST of AGAP009769-PA vs. nr
Match: gi|815893297|ref|XP_012237729.1| (uncharacterized protein LOC100740639 isoform X2 [Bombus impatiens]) HSP 1 Score: 65.4698 bits (158), Expect = 3.549e-8 Identity = 40/140 (28.57%), Postives = 68/140 (48.57%), Query Frame = 0 Query: 123 FASVIALVLLMNVCIGQEGPSEIPNVTSNSREGKLFPIFQIVQFPNTACQGASSRNGTCYT------------------------LSLACGSTSSENCTYLT--QTSTTANTISPCTYTICPCDSNVCRIRFDFDSFQIA 236 + ++ V +++ + + +EIPN S G+ FP+F +++F N+ C +++ NGTC+T CGST++ N TY T + TT CT T+ C+SN+C++R DF F +A Sbjct: 6 YLTIFLFVNIVSYKLDNDDITEIPNSMS---RGRFFPLFSVIRFANSQCLASNNLNGTCFTRRECRNYGGIPSGSCANGHGICCVFQKTCGSTTNVNNTYFTNPEYPTTYERQGRCTITVQRCNSNICQLRLDFLEFNLA 142
BLAST of AGAP009769-PA vs. nr
Match: gi|815893295|ref|XP_003484392.2| (uncharacterized protein LOC100740639 isoform X1 [Bombus impatiens]) HSP 1 Score: 65.4698 bits (158), Expect = 3.831e-8 Identity = 40/140 (28.57%), Postives = 68/140 (48.57%), Query Frame = 0 Query: 123 FASVIALVLLMNVCIGQEGPSEIPNVTSNSREGKLFPIFQIVQFPNTACQGASSRNGTCYT------------------------LSLACGSTSSENCTYLT--QTSTTANTISPCTYTICPCDSNVCRIRFDFDSFQIA 236 + ++ V +++ + + +EIPN S G+ FP+F +++F N+ C +++ NGTC+T CGST++ N TY T + TT CT T+ C+SN+C++R DF F +A Sbjct: 6 YLTIFLFVNIVSYKLDNDDITEIPNSMS---RGRFFPLFSVIRFANSQCLASNNLNGTCFTRRECRNYGGIPSGSCANGHGICCVFQKTCGSTTNVNNTYFTNPEYPTTYERQGRCTITVQRCNSNICQLRLDFLEFNLA 142
BLAST of AGAP009769-PA vs. nr
Match: gi|1325255292|ref|XP_023319566.1| (uncharacterized protein LOC111694771 isoform X2 [Eurytemora affinis]) HSP 1 Score: 65.855 bits (159), Expect = 3.880e-8 Identity = 40/108 (37.04%), Postives = 52/108 (48.15%), Query Frame = 0 Query: 153 REGKLFPIFQIVQFPNTACQGASSRNGTCYT------------------------LSLACGSTSSENCTYLTQTSTTANTISPCTYTICPCDSNVCRIRFDFDSFQIA 236 R GK +F +V+F N C G + RNGTCYT + CG TS+EN TY+ TT + S C+YTIC + V IR DF +F+IA Sbjct: 36 RVGKFLNLFSVVRFTNAPCLGNTGRNGTCYTEKQCRDKDGVVSGGCGGGFGVCCVFVIGCGGTSNENTTYM----TTDVSSSECSYTICKVNPTVSTIRLDFSTFEIA 139 The following BLAST results are available for this feature:
BLAST of AGAP009769-PA vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 15
Pagesback to top
BLAST of AGAP009769-PA vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of AGAP009769-PA vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold124_size330879:246902..277718+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold124_size330879-snap-gene-2.10 ID=maker-scaffold124_size330879-snap-gene-2.10|Name=AGAP009769-PA|organism=Tigriopus kingsejongensis|type=gene|length=30817bp|location=Sequence derived from alignment at scaffold124_size330879:246902..277718+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'AGAP009769-PA' has the following synonyms
Add to Basket
|