upf0258 protein kiaa1024-like isoform x2, maker-scaffold1253_size52701-snap-gene-0.9 (gene) Tigriopus kingsejongensis

Overview
Nameupf0258 protein kiaa1024-like isoform x2
Unique Namemaker-scaffold1253_size52701-snap-gene-0.9
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. L. salmonis genes
Match: EMLSAG00000003971 (supercontig:LSalAtl2s:LSalAtl2s2131:3862:6024:1 gene:EMLSAG00000003971 transcript:EMLSAT00000003971 description:"maker-LSalAtl2s2131-augustus-gene-0.6")

HSP 1 Score: 84.7297 bits (208), Expect = 2.694e-19
Identity = 45/139 (32.37%), Postives = 71/139 (51.08%), Query Frame = 0
Query:    1 LRIIGAHLNDSEAFDRLKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTE-IVRNAGKLLAEALAKMDNEGTLPKQAWNC 138
            LR  G  L +  A  RL+KMRP  +NY++WG T+     Y +A   ++LK D  W  V  DF+Y+DF +  +LN   F    D   CC + + +G  C C K    + E +      ++ EA+++ D +   P  +W+C
Sbjct:  107 LRTTGTDLTNPNAALRLQKMRPSSTNYISWGKTSXXVDIYRRASXANILKNDVTWVFVHTDFDYDDFNQTELLNMVRFFTF-DKNTCCGLADEEG--CSCKKWTKGADEYLAHTFFDIIVEAVSQTDKKIVPP--SWDC 240          
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|758213852|gb|AJO62239.1| (chemosensory ionotropic receptor IR1, partial [Tenebrio molitor])

HSP 1 Score: 72.7886 bits (177), Expect = 2.927e-11
Identity = 43/154 (27.92%), Postives = 73/154 (47.40%), Query Frame = 0
Query:    1 LRIIGAHLNDSEAFDRLKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEGTLPKQAWNCEDPSSGNNATREAFDL 154
            LR++ +   D    +RLK +RP P+N+    +T+N+ + ++ A   +L+    RW LVF DF Y++F K++I N    L   D   CC  M +K   C+C     +    +  A  ++   L  M  E +      +CED      +T   ++L
Sbjct:   15 LRMVISEDLDKTTANRLKAIRPIPNNFAIVATTSNMEELFQTAIDENLVTLPERWNLVFLDFQYDNFNKQLIKNLPINLLYVDKSICC--MFLKSETCECPHDFSLQESFLILATDIIKRVLYAMVTENSELTTNLSCEDAHYNAQSTNRFYEL 166          
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|939268719|ref|XP_014254520.1| (glutamate receptor ionotropic, delta-1 isoform X1 [Cimex lectularius])

HSP 1 Score: 72.4034 bits (176), Expect = 3.943e-11
Identity = 61/224 (27.23%), Postives = 104/224 (46.43%), Query Frame = 0
Query:    1 LRI-IGAHLNDSEAFDRLKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEGTLPKQ-AWNCEDPSSGNNATREAFDLAVGTTVNATSYLFKRDKHNVPLITAQVRIRAKSENKTGIVQVGDWDPVNRFVNAPNYKAENIKDYFRV 222
            LR+ + + LN + A +++KKMRP P   V  G T  ++ + EKA    L++RD  W LVF DF Y +  ++     T+ L   +   CC        NC+C    D S E +      L  A++K  ++G L +  + NC D S+ N  +   F   +    +    LF  D  N  ++T  + +  ++E+K G + +  W      +   + K   +K +FR+
Sbjct:  144 LRVALFSGLNTTTA-NQMKKMRPTPPFNVIVGETKFIKASLEKAHKFQLVRRDNTWILVFTDFKYGEMERDFYEKDTDVLTW-NPTACC---TGSEKNCECPLEMDFSDEFLGQVKIALETAVSKSLSQGVLERAISINC-DASNDNINSTSVFSNQLLKAAHEHWALF-YDAEN-SILTPNLNLNFQTESKKGNLNLASWSRSTGLIKEKHIKP--VKRFFRI 357          
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|939268721|ref|XP_014254521.1| (ionotropic receptor 25a isoform X2 [Cimex lectularius])

HSP 1 Score: 72.4034 bits (176), Expect = 3.970e-11
Identity = 61/224 (27.23%), Postives = 104/224 (46.43%), Query Frame = 0
Query:    1 LRI-IGAHLNDSEAFDRLKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEGTLPKQ-AWNCEDPSSGNNATREAFDLAVGTTVNATSYLFKRDKHNVPLITAQVRIRAKSENKTGIVQVGDWDPVNRFVNAPNYKAENIKDYFRV 222
            LR+ + + LN + A +++KKMRP P   V  G T  ++ + EKA    L++RD  W LVF DF Y +  ++     T+ L   +   CC        NC+C    D S E +      L  A++K  ++G L +  + NC D S+ N  +   F   +    +    LF  D  N  ++T  + +  ++E+K G + +  W      +   + K   +K +FR+
Sbjct:    5 LRVALFSGLNTTTA-NQMKKMRPTPPFNVIVGETKFIKASLEKAHKFQLVRRDNTWILVFTDFKYGEMERDFYEKDTDVLTW-NPTACC---TGSEKNCECPLEMDFSDEFLGQVKIALETAVSKSLSQGVLERAISINC-DASNDNINSTSVFSNQLLKAAHEHWALF-YDAEN-SILTPNLNLNFQTESKKGNLNLASWSRSTGLIKEKHIKP--VKRFFRI 218          
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|817081920|ref|XP_012263496.1| (ionotropic receptor 25a [Athalia rosae])

HSP 1 Score: 72.4034 bits (176), Expect = 4.451e-11
Identity = 56/214 (26.17%), Postives = 96/214 (44.86%), Query Frame = 0
Query:   16 RLKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDF---PKEMILN-QTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEG-TLPKQAWNCED--PSSGNNATREAFDLAVGTTVNATSYLFKRDKHNVPLITAQVRIRAKSENKTGIVQVGDWDPVNRFVNAPNYKAENIKDYFRV 222
            +++ MRP PS Y  + +T+N+   ++ A    L+KRD  W LVF DFNY+DF     ++ LN   N L M+++  C LI     + C C           +    LL   ++++   G T+  +  NC      S +NAT +AF   + T +N         + NV    A + IR   + ++   ++G+W    +            + +FR+
Sbjct:  174 KVRAMRPSPSYYTIYATTSNMETIFKAAIDGGLVKRDGTWNLVFTDFNYQDFRYLSGDLELNVSVNVLTMKNEVCCRLIGE---SPCTCPNDFQTFPRYFKRLIGLLVSVMSEVQKSGVTIEPKKINCNQGIEVSADNATVQAFKKNLLTKLNTNDTFDYIAERNVISYQAAIDIRNIVQGRSR--KIGEWSRRRKITTEKGMDISPARRFFRI 382          
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|913305507|ref|XP_013183142.1| (PREDICTED: glutamate receptor ionotropic, kainate 2, partial [Amyelois transitella])

HSP 1 Score: 72.0182 bits (175), Expect = 5.379e-11
Identity = 58/213 (27.23%), Postives = 92/213 (43.19%), Query Frame = 0
Query:   17 LKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDV--STEIVRNAGKLLAEALAKMDNEGTLPKQAWNCEDPSSGN--NATREAFDLAV---GTTVNATSYLFKRDKHNVPLITAQVRIRAKSENKTGIVQVGDWDPVNRFVNAPNYKAENIKDYFRV 222
            LK MRP PS YV  GS   V   Y +A    L++R+ RW LVF D++  +     ++  T  L + D   CC    + G   +CS  GDV  +  I+ +  + + E  +K+D+E        +C+D   G   N TRE         G   N T + +  ++  + L +  V    K +    +  V  W     +   P    E +K +FR+
Sbjct:  153 LKTMRPEPSFYVIVGSNGFVMDTYRRALKEKLVRRNYRWNLVFTDYSAGNVDMSQLVLPTVLLSI-DQSECC---KISGQREECSCSGDVQRTQHIITSLLQYITEVYSKLDHELQYLTVKMDCQDAVGGTELNVTRERVYRQFADDGDMSNDTLFYWNAERTGLFLRSRFVLTIYKPDED--LQTVATWSADEEYRLLPGVVLEPLKMFFRI 359          
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|645015117|ref|XP_008206325.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100121319 [Nasonia vitripennis])

HSP 1 Score: 72.0182 bits (175), Expect = 7.105e-11
Identity = 61/231 (26.41%), Postives = 98/231 (42.42%), Query Frame = 0
Query:    1 LRIIGAHLNDSEAFDRLKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFP---KEMILNQT-NFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEGTL--PKQAWNCEDPSSGN---NATREAFDLAVGTTVNATSYLFKRDKHNVPLITAQVRIRAKSENKTGIVQVGDWDPVNRFVNAPNYKAENIKDYFRV 222
            +R++       +  +R+  MRP PS Y  +  T ++ + ++ A    L+KRD  W LVF D+NY +F    +   LN T N L M++D  CC +M      C C     +     R    L+ E L+++ +   L  P+        SSG+   NAT   FD  +   +         +K  + LIT +     K  +   +V    W      V  PN   +  + YFR+
Sbjct:  207 IRLVVIDYLSPQTVERIGNMRPLPSYYATYSDTRHMEELFKTAIDGGLVKRDGVWYLVFTDYNYAEFSYFKEASALNVTVNVLTMKEDV-CCHLM-YTNPPCSCPPNFQIFDHYFRRLINLIVETLSELQSANQLQEPRSGQCTAKNSSGSAAGNATLSDFDKKILAKIQKNETFEYVEK--LTLITYRAAAELKVLSNGELVANATWSRDTGIVPLPNRTIQAARRYFRI 433          
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|946716709|gb|ALM24945.1| (ionotropic receptor 8a.1 [Athetis dissimilis])

HSP 1 Score: 71.633 bits (174), Expect = 9.065e-11
Identity = 52/207 (25.12%), Postives = 92/207 (44.44%), Query Frame = 0
Query:   17 LKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEGTLPKQAWNCEDPSSGNNATRE-AFDLAVGTTVNATSYLFKRDKHNVPLITAQVRIRAKSENKTGIVQVGDWDPVNRFVNAPNYKAENIKDYFRV 222
            LK MRP PS Y+  G    V   Y +A    L++R  RW L+  D++  D  + ++   T  LQ  D   CC +  M+  +C+C         ++    + ++E  +K+D E +L     +C+DP S  N+TR+  F      +  +   LF  D     L+  + R    + +   +  + +W     +   P  + E +K +FR+
Sbjct:  174 LKTMRPEPSFYIIVGDNGFVMDTYRRAVKEKLVRRSDRWNLILTDYSSPDTSQLVLPTLT--LQ-ADPVECCKL--MRKEDCNCPSDFQRKQYVLNALIQYISETYSKLDRELSLTTTTVDCDDPQSLMNSTRDRLFRQFAEDSEMSNETLFYWDSERSGLLL-RSRFILSTASPYALQPIANWSAGEEYKLLPGAELEPLKMFFRI 374          
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|1189483765|gb|ARO76468.1| (ionotropic receptor 5, partial [Conogethes punctiferalis])

HSP 1 Score: 70.8626 bits (172), Expect = 1.137e-10
Identity = 54/210 (25.71%), Postives = 93/210 (44.29%), Query Frame = 0
Query:   17 LKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTE--IVRNAGKLLAEALAKMDNEGTLPKQAWNCED-PSSGNNATREAFDLAVGTTVNATS-YLFKRDKHNVPLITAQVRIRAKSENKTGIVQVGDWDPVNRFVNAPNYKAENIKDYFRV 222
            LK MRP PS Y+  G +  V   Y +A    L++RD RW L+  D++ + F    ++  T  L + D   CC ++   G+  DCS   D+  +  I+      LAE  +K++N+ ++     +C++  +S  N TRE            ++  LF  D     L      + +  +  +G+  V  W     +   P    E ++ +FRV
Sbjct:  172 LKNMRPDPSFYIIVGESGFVMDTYRRAVKEKLVRRDFRWYLLLTDYSGDSFDTSQLVLPTMMLHV-DANECCKLL---GSKDDCSCPSDLKRKQYILSGLMTYLAETYSKLENDLSVVTAKMDCDNIQASEMNVTRERVVRQFADDEQISNDTLFYWDGERSALYLRSTFVLSTFKPDSGLETVASWSANEEYKLLPGVTLEPLRPFFRV 377          
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|1144313568|gb|AQM73610.1| (putative ionotropic receptor IR8a [Cydia nigricana])

HSP 1 Score: 70.8626 bits (172), Expect = 1.299e-10
Identity = 53/206 (25.73%), Postives = 88/206 (42.72%), Query Frame = 0
Query:   17 LKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEGTLPKQAWNCEDPSSGNNATREAFDLAVGTTVNATSYLFKRDKHNVPLITAQVRIRAKSENKTGIVQVGDWDPVNRFVNAPNYKAENIKDYFRV 222
            LK MRP PS +V  GS A V   Y++A    L++RD RW LV  D++  D      +     LQ+ D   CC +M  K   C CS+  +    I+    +LLAE  +K+D++    +   +C++  + N    + +         +   LF  D     +      I +  +  TG+     W     +   P    E ++ +FR+
Sbjct:   36 LKTMRPEPSFFVLVGSGAFVTDTYKRAVKEKLVRRDYRWNLVLTDYSTLDLQP---VKPAMVLQV-DPAECCKVMGQKD-GCSCSQDFERKQPILFALLQLLAETYSKLDDDEFTARV--DCDNLVAENGTRSKVYHQLAEELGASNESLFYWDADRSGIFLRSRFILSTLKPDTGLQHAAIWSADEEYKLLPGVTLEPLRQFFRI 234          
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|1233172636|ref|XP_022187829.1| (ionotropic receptor 25a [Nilaparvata lugens])

HSP 1 Score: 70.4774 bits (171), Expect = 1.809e-10
Identity = 59/233 (25.32%), Postives = 101/233 (43.35%), Query Frame = 0
Query:    1 LRIIGAHLNDSEAFDRLKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNE--GTLPKQAWNCED-PSSGNNATREAFDLAVG--TTVNATSY------LFKRDKHNVPLITAQVRIRAKSENKTGIVQVGDWDPVNRFVNAPNYKAENIKDYFRV 222
            LR+   +  ++     +  M P PSN V    T ++   +++A    L++ D RW LVF DFNYE F + ++   T    M+  + CC +  + G NC C    +V +  +    KL+ +   K+ N    T P  A +C++  ++  N    AF   +   ++ N   Y      L+ R +  V + T+  R     E  T   ++  WD       AP      +K +FR+
Sbjct:   90 LRVYAVNGLNASWVKTISSMLPIPSNLVVIAQTNHINSIFKQAMRAKLIQMDDRWNLVFTDFNYERFHRGILSVATTLYTMK-KKACCPLAQL-GENCVCPDTTEVESAFLNLLPKLIVDIFEKLTNSLIYTGPVIA-DCQNIKTNATNPLWTAFYKYISKVSSENGVGYARKMMELYPRLEFQVVMTTS--RQGYLPEVPTADSKLATWDTEFGLQTAPGLIVNPVKRFFRI 317          
The following BLAST results are available for this feature:
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000039712.694e-1932.37supercontig:LSalAtl2s:LSalAtl2s2131:3862:6024:1 ge... [more]
back to top
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|758213852|gb|AJO62239.1|2.927e-1127.92chemosensory ionotropic receptor IR1, partial [Ten... [more]
gi|939268719|ref|XP_014254520.1|3.943e-1127.23glutamate receptor ionotropic, delta-1 isoform X1 ... [more]
gi|939268721|ref|XP_014254521.1|3.970e-1127.23ionotropic receptor 25a isoform X2 [Cimex lectular... [more]
gi|817081920|ref|XP_012263496.1|4.451e-1126.17ionotropic receptor 25a [Athalia rosae][more]
gi|913305507|ref|XP_013183142.1|5.379e-1127.23PREDICTED: glutamate receptor ionotropic, kainate ... [more]
gi|645015117|ref|XP_008206325.1|7.105e-1126.41PREDICTED: LOW QUALITY PROTEIN: uncharacterized pr... [more]
gi|946716709|gb|ALM24945.1|9.065e-1125.12ionotropic receptor 8a.1 [Athetis dissimilis][more]
gi|1189483765|gb|ARO76468.1|1.137e-1025.71ionotropic receptor 5, partial [Conogethes punctif... [more]
gi|1144313568|gb|AQM73610.1|1.299e-1025.73putative ionotropic receptor IR8a [Cydia nigricana... [more]
gi|1233172636|ref|XP_022187829.1|1.809e-1025.32ionotropic receptor 25a [Nilaparvata lugens][more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1253_size52701supercontigscaffold1253_size52701:39211..39957 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1253_size52701-snap-gene-0.9-mRNA-1maker-scaffold1253_size52701-snap-gene-0.9-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1253_size52701:39211..39957+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1253_size52701-snap-gene-0.9 ID=maker-scaffold1253_size52701-snap-gene-0.9|Name=upf0258 protein kiaa1024-like isoform x2|organism=Tigriopus kingsejongensis|type=gene|length=747bp|location=Sequence derived from alignment at scaffold1253_size52701:39211..39957+ (Tigriopus kingsejongensis)
GCAACTCCTTCCTGAGGATCATTGGGGCGCACTTGAATGACTCTGAGGCC TTTGACCGCTTGAAGAAGATGAGACCCAGACCATCCAACTATGTGGCCTG GGGATCCACGGCTAATGTGAGGAAGGCTTACGAAAAGGCCAGGAGTATGG ACCTTCTCAAGCGCGACACCCGCTGGACTCTAGTCTTTGAGGACTTCAAC TACGAGGACTTCCCCAAGGAGATGATCCTCAACCAGACCAATTTCTTACA AATGGAGGACGACCAGAACTGTTGCCTTATTATGAACATGAAAGGCGCAA GTAGGATTCCGAGCATCTTGGTCTTCTTAACCAGTCTATCTAACCGCATG GTTGTGTCTTTTCCTTTCAGACTGCGATTGCTCCAAGATGGGGGATGTTT CAACCGAGATTGTAAGGAATGCCGGGAAGCTCTTGGCCGAAGCCTTGGCC AAGATGGACAATGAGGGCACCCTACCCAAGCAGGCTTGGAACTGTGAGGA TCCATCGAGTGGGAACAACGCCACGAGGGAGGCCTTCGACCTGGCCGTAG GCACCACGGTCAATGCCACTTCCTATCTTTTCAAGAGGGACAAGCATAAT GTTCCGCTCATCACCGCCCAAGTTCGGATCCGGGCCAAGTCCGAAAACAA AACGGGAATCGTGCAGGTTGGAGACTGGGATCCAGTCAACCGCTTCGTCA ACGCTCCCAACTACAAGGCCGAGAACATCAAGGACTACTTCAGAGTT
back to top
Synonyms
The feature 'upf0258 protein kiaa1024-like isoform x2' has the following synonyms
Synonym
Tk01372
Add to Basket