upf0258 protein kiaa1024-like isoform x2, maker-scaffold1253_size52701-snap-gene-0.9 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. L. salmonis genes
Match: EMLSAG00000003971 (supercontig:LSalAtl2s:LSalAtl2s2131:3862:6024:1 gene:EMLSAG00000003971 transcript:EMLSAT00000003971 description:"maker-LSalAtl2s2131-augustus-gene-0.6") HSP 1 Score: 84.7297 bits (208), Expect = 2.694e-19 Identity = 45/139 (32.37%), Postives = 71/139 (51.08%), Query Frame = 0 Query: 1 LRIIGAHLNDSEAFDRLKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTE-IVRNAGKLLAEALAKMDNEGTLPKQAWNC 138 LR G L + A RL+KMRP +NY++WG T+ Y +A ++LK D W V DF+Y+DF + +LN F D CC + + +G C C K + E + ++ EA+++ D + P +W+C Sbjct: 107 LRTTGTDLTNPNAALRLQKMRPSSTNYISWGKTSXXVDIYRRASXANILKNDVTWVFVHTDFDYDDFNQTELLNMVRFFTF-DKNTCCGLADEEG--CSCKKWTKGADEYLAHTFFDIIVEAVSQTDKKIVPP--SWDC 240
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|1247039572|gb|PCG74622.1| (hypothetical protein B5V51_13045, partial [Heliothis virescens]) HSP 1 Score: 70.4774 bits (171), Expect = 1.830e-10 Identity = 54/208 (25.96%), Postives = 90/208 (43.27%), Query Frame = 0 Query: 17 LKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEGTLPKQAWNCEDPSSGNNATREAF--DLAVGTTVNATSYLFKRDKHNVPLITAQVRIRAKSENKTGIVQVGDWDPVNRFVNAPNYKAENIKDYFRV 222 LK MRP PS YV G + Y +A L++RD RW L+ D++ + + ++ T LQ D CC + MK C C I+ + + +AE +K+D + L + +CE+ + N+TR+ A T ++ + LF D L I + + G + W + P + E +K +FR+ Sbjct: 161 LKTMRPEPSFYVIVGENGFIMDTYRRAVKEKLVRRDFRWNLIVTDYSTLELSQ--LVLPTVMLQA-DPGECCRL--MKREECSCPSDFQRKQHILNSLIQYIAEVYSKLDKDLPLITSSVSCEERETTMNSTRDRLYRQFAEDTEISNET-LFYWDMDRSGLFLRSRFILSTYKPGAGQQTIATWSADEEYKLLPGVELEPLKMFFRI 362
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|1168014969|gb|ARB05669.1| (ionization receptor 8a [Helicoverpa armigera]) HSP 1 Score: 70.4774 bits (171), Expect = 1.859e-10 Identity = 53/207 (25.60%), Postives = 87/207 (42.03%), Query Frame = 0 Query: 17 LKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQTNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEGTLPKQAWNCEDPSSGNNATREAFDLAVGTTVNAT-SYLFKRDKHNVPLITAQVRIRAKSENKTGIVQVGDWDPVNRFVNAPNYKAENIKDYFRV 222 LK MRP PS YV G + Y +A L++RD RW LV D++ + + ++ T LQ D CC +M + +C C I+ + +AE +K+D + L + +CE+P + N+TR+ + LF D L I + + G + W + P + E +K +FR+ Sbjct: 174 LKTMRPEPSFYVIVGENGFIMDTYRRAVKEKLVRRDYRWNLVLTDYSTLELSQLVLPTVT--LQA-DPGECCKLMRRE--DCSCPNDFQRKQYILNALIQYIAEVYSKLDRDLPLVTSSISCEEPEAVMNSTRDRLYRQFAEDAEISNETLFYWDMDRSGLFLRSRFILSTYKPTAGQQTIATWSADEEYKLLPGVELEPLKMFFRI 375
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|1004401980|gb|EFA00693.2| (Glutamate receptor ionotropic, kainate 3-like Protein [Tribolium castaneum]) HSP 1 Score: 70.4774 bits (171), Expect = 1.929e-10 Identity = 60/223 (26.91%), Postives = 102/223 (45.74%), Query Frame = 0 Query: 1 LRIIGAHLNDSEAFDRLKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQ-TNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEGTLPKQAWNCEDPSSGNNATREAFDLAVGTTVNATSYLFKRDKHNVPLITAQVRIRAKSENKTGIVQVGDWDPVNRFVNAPNYKAENIKDYFRV 222 LR++ + D +RLK +RP P+N+ +++N+ + + A +L+ RW LVF DF Y+ F K+ + N N L M D++ CC ++ C+C ++ + A LA+ L + E L + NC+D S + ATR F + V++ +FK + V I E TG +V +++ K E I +FR+ Sbjct: 91 LRMVISENLDKTTANRLKAIRPIPNNFAIVATSSNMEELLQTALDENLVTLPERWNLVFLDFQYQQFDKKRLKNMPINLLHM-DEEICCRF--LQSEKCECPHDFNLQENFLSLATNTLAKILKTLTMENLL-RADLNCDD-SRYSEATRTRFYELLQQEVDSNDLVFKEN------FGLHVNINGVIE--TGDEKVAEYNYKTGVTVLDGKKVEPITPFFRI 300
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|1008432635|ref|XP_968346.2| (PREDICTED: glutamate receptor ionotropic, kainate 2 [Tribolium castaneum]) HSP 1 Score: 70.4774 bits (171), Expect = 2.152e-10 Identity = 60/223 (26.91%), Postives = 102/223 (45.74%), Query Frame = 0 Query: 1 LRIIGAHLNDSEAFDRLKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDFPKEMILNQ-TNFLQMEDDQNCCLIMNMKGANCDCSKMGDVSTEIVRNAGKLLAEALAKMDNEGTLPKQAWNCEDPSSGNNATREAFDLAVGTTVNATSYLFKRDKHNVPLITAQVRIRAKSENKTGIVQVGDWDPVNRFVNAPNYKAENIKDYFRV 222 LR++ + D +RLK +RP P+N+ +++N+ + + A +L+ RW LVF DF Y+ F K+ + N N L M D++ CC ++ C+C ++ + A LA+ L + E L + NC+D S + ATR F + V++ +FK + V I E TG +V +++ K E I +FR+ Sbjct: 152 LRMVISENLDKTTANRLKAIRPIPNNFAIVATSSNMEELLQTALDENLVTLPERWNLVFLDFQYQQFDKKRLKNMPINLLHM-DEEICCRF--LQSEKCECPHDFNLQENFLSLATNTLAKILKTLTMENLL-RADLNCDD-SRYSEATRTRFYELLQQEVDSNDLVFKEN------FGLHVNINGVIE--TGDEKVAEYNYKTGVTVLDGKKVEPITPFFRI 361
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Match: gi|998510142|ref|XP_015515535.1| (PREDICTED: uncharacterized protein LOC107221151 [Neodiprion lecontei]) HSP 1 Score: 69.707 bits (169), Expect = 4.295e-10 Identity = 63/256 (24.61%), Postives = 118/256 (46.09%), Query Frame = 0 Query: 3 IIGAHLNDSEAFDRLKKMRPRPSNYVAWGSTANVRKAYEKARSMDLLKRDTRWTLVFEDFNYEDF---PKEMILN-QTNFLQMEDDQNCCLIMNMKGANCDC-------------------SKMGDVSTEIVRNAGK-------LLAEALAKMDNEG-TLPKQAWNCEDPS--SGNNATREAF--DLAVGTTVNAT-SYLFKRDKHNVPLITAQVRIRAKSENKTGIVQVGDWDPVNRFVNAPNYKAENIKDYFRV 222 ++ LN++ +++ MRP P+ YV + ++AN+ ++ A L++RD W LVF D+NY+DF ++ LN N L M+++ C LI + C C + +G+ T ++ + LL ++++ G T+ + NC++ S +N T EAF +L + N T YL R+ LIT + I K+ + + +VG+W+ ++ + + +FR+ Sbjct: 161 VVLDELNEASTM-KVRAMRPSPTYYVIYATSANMETLFKAAIDGGLVRRDGTWNLVFTDYNYQDFRYIAGDLELNVSINILTMKNEVCCRLIGE---SPCTCPNDFQASGKSLTETETYLSASIGNKRTALLSTFPRYFKRLIGLLVSVMSEVQKSGVTVEPKVINCKNKEDVSTDNTTVEAFKKNLLTKLSTNHTFEYLPDRN-----LITYRAEIELKTLTQGRLQKVGEWNKQHKITTDKGMEITPARRFFRI 407 The following BLAST results are available for this feature:
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of upf0258 protein kiaa1024-like isoform x2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1253_size52701:39211..39957+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1253_size52701-snap-gene-0.9 ID=maker-scaffold1253_size52701-snap-gene-0.9|Name=upf0258 protein kiaa1024-like isoform x2|organism=Tigriopus kingsejongensis|type=gene|length=747bp|location=Sequence derived from alignment at scaffold1253_size52701:39211..39957+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'upf0258 protein kiaa1024-like isoform x2' has the following synonyms
Add to Basket
|