40s ribosomal protein s24, maker-scaffold1280_size50848-snap-gene-0.11 (gene) Tigriopus kingsejongensis

Overview
Name40s ribosomal protein s24
Unique Namemaker-scaffold1280_size50848-snap-gene-0.11
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of 40s ribosomal protein s24 vs. L. salmonis genes
Match: EMLSAG00000002214 (supercontig:LSalAtl2s:LSalAtl2s141:401789:402187:-1 gene:EMLSAG00000002214 transcript:EMLSAT00000002214 description:"augustus_masked-LSalAtl2s141-processed-gene-4.0")

HSP 1 Score: 213.386 bits (542), Expect = 1.070e-72
Identity = 98/128 (76.56%), Postives = 114/128 (89.06%), Query Frame = 0 
Query:   25 ITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKCTPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKKAKVGSAAKK 152
            +TVRTRKYM+NRLL RKQM+VD LHPN+++V KT+IREKLAKMYKCTPDRV AFG+RTNFGGGK++GFA+IYDTMDFAKKFEPK+RL RQG +E+  +  RKQKKERKNRMK VRGTKKA +GS  KK
Sbjct:    5 VTVRTRKYMNNRLLNRKQMIVDXLHPNRSTVPKTEIREKLAKMYKCTPDRVFAFGYRTNFGGGKTTGFAIIYDTMDFAKKFEPKYRLARQGVIERATKQSRKQKKERKNRMKTVRGTKKASIGSGGKK 132
[Close]
BLAST of 40s ribosomal protein s24 vs. L. salmonis genes
Match: EMLSAG00000009183 (supercontig:LSalAtl2s:LSalAtl2s581:230247:235468:1 gene:EMLSAG00000009183 transcript:EMLSAT00000009183 description:"snap_masked-LSalAtl2s581-processed-gene-2.4")

HSP 1 Score: 63.5438 bits (153), Expect = 5.254e-14
Identity = 27/45 (60.00%), Postives = 37/45 (82.22%), Query Frame = 0 
Query:   22 EGTITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAK 66
            + T+TV T KYM+N+L  RKQM+VDVLHPN+++V +T+IREK  K
Sbjct:   64 DTTVTVCTWKYMNNKLFNRKQMIVDVLHPNRSTVPETNIREKFDK 108
[Close]
BLAST of 40s ribosomal protein s24 vs. SwissProt
Match: gi|20140134|sp|Q962Q6.1|RS24_SPOFR (RecName: Full=40S ribosomal protein S24)

HSP 1 Score: 204.912 bits (520), Expect = 6.498e-68
Identity = 102/133 (76.69%), Postives = 115/133 (86.47%), Query Frame = 0 
Query:   20 MSEGTITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKCTPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKKAKVGSAAKK 152
            M+EGT T+RTRK+M+NRLLARKQMV DVLHP K +V+KT+IREKLAKMYK TPD V  FGF+TNFGGGKS+GFALIYDT+D AKKFEPK RL R G  EK  R  RKQ+KERKNRMKKVRGTKK+KVG+AAKK
Sbjct:    1 MTEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK-RPTRKQRKERKNRMKKVRGTKKSKVGAAAKK 132
[Close]
BLAST of 40s ribosomal protein s24 vs. SwissProt
Match: gi|3122816|sp|O42387.1|RS24_TAKRU (RecName: Full=40S ribosomal protein S24)

HSP 1 Score: 191.43 bits (485), Expect = 1.582e-62
Identity = 94/129 (72.87%), Postives = 110/129 (85.27%), Query Frame = 0 
Query:   24 TITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKCTPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKKAKVGSAAKK 152
            T+TVRTRK+M+NRLL RKQMVVDVLHP KA+V KT+IREKLAKMYK TPD V  FGFRT FGGGK++GFA++YD++D+AKK EPK RL R G  EK  +T RKQ+KERKNRMKKVRGTKKA VG++ KK
Sbjct:    4 TVTVRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKTTPDVVFVFGFRTQFGGGKTTGFAMVYDSLDYAKKNEPKHRLARHGLFEKK-KTSRKQRKERKNRMKKVRGTKKASVGASKKK 131
[Close]
BLAST of 40s ribosomal protein s24 vs. SwissProt
Match: gi|20140088|sp|Q90YQ0.1|RS24_ICTPU (RecName: Full=40S ribosomal protein S24)

HSP 1 Score: 189.119 bits (479), Expect = 1.076e-61
Identity = 91/129 (70.54%), Postives = 111/129 (86.05%), Query Frame = 0 
Query:   24 TITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKCTPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKKAKVGSAAKK 152
            ++T+RTRK+M+NRLL RKQMV+DVLHP KA+V KT+IREKLAKMYK TPD V  FGF+T FGGGK++GFA++YD++D+AKK EPK+RL R G  EK  +T RKQ+KERKNRMKKVRGTKKA VG+A KK
Sbjct:    4 SVTLRTRKFMTNRLLQRKQMVLDVLHPGKATVPKTEIREKLAKMYKTTPDVVFVFGFKTQFGGGKTTGFAMVYDSLDYAKKNEPKYRLARHGLYEKK-KTSRKQRKERKNRMKKVRGTKKASVGAAGKK 131
[Close]
BLAST of 40s ribosomal protein s24 vs. SwissProt
Match: gi|20140347|sp|Q9W6X9.1|RS24_ORYLA (RecName: Full=40S ribosomal protein S24)

HSP 1 Score: 182.57 bits (462), Expect = 3.936e-59
Identity = 89/129 (68.99%), Postives = 106/129 (82.17%), Query Frame = 0 
Query:   24 TITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKCTPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKKAKVGSAAKK 152
            T+T+RTRK+M+NRLL RKQMVVDVLHP KA+V KT+IREKLAKMYK TPD V  FGFRT FGGGK++GFA++YD++D+AKK EPK RL   G  EK  +T RKQ+ ER+NRMKKVR  KKA VG+A KK
Sbjct:    4 TVTIRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKTTPDVVFVFGFRTQFGGGKTTGFAMVYDSLDYAKKNEPKHRLATHGLYEKK-KTSRKQRTERQNRMKKVRSIKKASVGAAGKK 131
[Close]
BLAST of 40s ribosomal protein s24 vs. SwissProt
Match: gi|75041916|sp|Q5RAQ8.1|RS24_PONAB (RecName: Full=40S ribosomal protein S24 >gi|91207637|sp|Q56JU9.2|RS24_BOVIN RecName: Full=40S ribosomal protein S24)

HSP 1 Score: 166.007 bits (419), Expect = 1.649e-52
Identity = 90/129 (69.77%), Postives = 108/129 (83.72%), Query Frame = 0 
Query:   24 TITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKCTPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKKAKVGSAAKK 152
            T+T+RTRK+M+NRLL RKQMV+DVLHP KA+V KT+IREKLAKMYK TPD +  FGFRT+FGGGK++GF +IYD++D+AKK EPK RL R G  EK  +T RKQ+KERKNRMKKVRGT KA VG+  KK
Sbjct:    4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKK-KTSRKQRKERKNRMKKVRGTAKANVGAGKKK 131
[Close]
BLAST of 40s ribosomal protein s24 vs. SwissProt
Match: gi|51338620|sp|P62850.1|RS24_RAT (RecName: Full=40S ribosomal protein S24 >gi|51338645|sp|P62847.1|RS24_HUMAN RecName: Full=40S ribosomal protein S24; AltName: Full=Small ribosomal subunit protein eS24 >gi|51338646|sp|P62848.1|RS24_MESAU RecName: Full=40S ribosomal protein S24; AltName: Full=Ribosomal protein S19 >gi|51338647|sp|P62849.1|RS24_MOUSE RecName: Full=40S ribosomal protein S24)

HSP 1 Score: 164.466 bits (415), Expect = 6.248e-52
Identity = 89/128 (69.53%), Postives = 107/128 (83.59%), Query Frame = 0 
Query:   24 TITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKCTPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKKAKVGSAAK 151
            T+T+RTRK+M+NRLL RKQMV+DVLHP KA+V KT+IREKLAKMYK TPD +  FGFRT+FGGGK++GF +IYD++D+AKK EPK RL R G  EK  +T RKQ+KERKNRMKKVRGT KA VG+  K
Sbjct:    4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKK-KTSRKQRKERKNRMKKVRGTAKANVGAGKK 130
[Close]
BLAST of 40s ribosomal protein s24 vs. SwissProt
Match: gi|133863|sp|P02377.1|RS24_XENLA (RecName: Full=40S ribosomal protein S24; AltName: Full=S19)

HSP 1 Score: 164.466 bits (415), Expect = 7.372e-52
Identity = 89/129 (68.99%), Postives = 108/129 (83.72%), Query Frame = 0 
Query:   24 TITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKCTPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKKAKVGSAAKK 152
            T+T+RTRK+M+NRLL RKQMV+DVLHP KA+V KT+IREKLAKMYK TPD +  FGFRT+FGGGK++GF +IYD++D+AKK EPK RL + G  EK  +T RKQ+KERKNRMKKVRGT KA VG+  KK
Sbjct:    4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLAKHGLYEKK-KTSRKQRKERKNRMKKVRGTAKANVGAGKKK 131
[Close]
BLAST of 40s ribosomal protein s24 vs. SwissProt
Match: gi|115502823|sp|Q8LC83.2|RS242_ARATH (RecName: Full=40S ribosomal protein S24-2)

HSP 1 Score: 163.696 bits (413), Expect = 1.451e-51
Identity = 79/134 (58.96%), Postives = 104/134 (77.61%), Query Frame = 0 
Query:   20 MSEGTITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKC-TPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKKAKVGSAAKK 152
            M+E  +T+RTR +M+NRLLARKQ V+DVLHP +A+V+K +++EKLA+MY+   P+ +  F FRT+FGGGKSSG+ LIYDT++ AKKFEPK+RL+R G L+  +   RKQ KERKNR KK+RG KK K G   KK
Sbjct:    1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCFKFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNG-LDTKIEKSRKQIKERKNRAKKIRGVKKTKAGDTKKK 133
[Close]
BLAST of 40s ribosomal protein s24 vs. SwissProt
Match: gi|75076037|sp|Q4R5H5.1|RS24_MACFA (RecName: Full=40S ribosomal protein S24)

HSP 1 Score: 162.54 bits (410), Expect = 3.340e-51
Identity = 89/129 (68.99%), Postives = 107/129 (82.95%), Query Frame = 0 
Query:   24 TITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKCTPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKKAKVGSAAKK 152
            T+T+RTRK+M+NRLL RKQMV+ VLHP KA+V KT+IREKLAKMYK TPD +  FGFRT+FGGGK++GF +IYD++D+AKK EPK RL R G  EK  +T RKQ+KERKNRMKKVRGT KA VG+  KK
Sbjct:    4 TVTIRTRKFMTNRLLQRKQMVIGVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKK-KTSRKQRKERKNRMKKVRGTAKANVGAGKKK 131
[Close]
BLAST of 40s ribosomal protein s24 vs. SwissProt
Match: gi|6093881|sp|O59865.3|RS24B_SCHPO (RecName: Full=40S ribosomal protein S24-B)

HSP 1 Score: 157.147 bits (396), Expect = 5.802e-49
Identity = 77/124 (62.10%), Postives = 98/124 (79.03%), Query Frame = 0 
Query:   20 MSEGTITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKCTPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKK 143
            MSE  +T+RTRK+M+NRLL RKQMVVD+LHP KA+++K +IREKLA+MYK   + V AFG RT+FGGG+S+GFALIYD+ +  KKFEP +RLVR G  E   +  R+Q+K+RKNR KKV GT K
Sbjct:    1 MSEA-VTIRTRKFMTNRLLQRKQMVVDILHPGKANLSKNEIREKLAQMYKTDSECVQAFGLRTHFGGGRSTGFALIYDSTESMKKFEPHYRLVRVGQAEPIQKVARQQRKQRKNRGKKVFGTGK 123
[Close]
BLAST of 40s ribosomal protein s24 vs. nr
Match: gi|225718518|gb|ACO15105.1| (40S ribosomal protein S24 [Caligus clemensi])

HSP 1 Score: 218.009 bits (554), Expect = 1.222e-70
Identity = 98/128 (76.56%), Postives = 119/128 (92.97%), Query Frame = 0 
Query:   25 ITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKCTPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKKAKVGSAAKK 152
            +T+RTRKYM+NRLL RKQM+VDVLHPN+++V KT+IREKLAKMYKCTPDRV AFG+RTNFGGGK++GFA+IY+T+DFAKKFEPK+RL RQG +E+P ++ RKQKKERKNRMKKVRGTKKA  G+A+KK
Sbjct:    5 VTIRTRKYMNNRLLNRKQMIVDVLHPNRSTVPKTEIREKLAKMYKCTPDRVFAFGYRTNFGGGKTTGFAIIYETLDFAKKFEPKYRLARQGVIERPTKSSRKQKKERKNRMKKVRGTKKAATGNASKK 132
[Close]
BLAST of 40s ribosomal protein s24 vs. nr
Match: gi|1133421720|ref|XP_019866497.1| (PREDICTED: 40S ribosomal protein S24 isoform X1 [Aethina tumida] >gi|1133421722|ref|XP_019866498.1| PREDICTED: 40S ribosomal protein S24 isoform X2 [Aethina tumida])

HSP 1 Score: 218.009 bits (554), Expect = 1.334e-70
Identity = 109/136 (80.15%), Postives = 120/136 (88.24%), Query Frame = 0 
Query:   20 MSEGTITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKCTPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKKAKVGSAAKKGGK 155
            M+EGT T+RTRK+M+NRLLARKQMVVDVLHP + SV KTDIREKLAKMYK TPD V  FGFRTNFGGGKS+GFALIYDT+DFAKKFEPK RL R G  EK  +T RKQ+KERKNRMKKVRGTKK+KVG+AAKKGGK
Sbjct:    1 MTEGTATIRTRKFMTNRLLARKQMVVDVLHPGQPSVKKTDIREKLAKMYKVTPDVVFVFGFRTNFGGGKSTGFALIYDTLDFAKKFEPKHRLARHGLYEKKQQT-RKQRKERKNRMKKVRGTKKSKVGAAAKKGGK 135
[Close]
BLAST of 40s ribosomal protein s24 vs. nr
Match: gi|1080070890|ref|XP_018577872.1| (40S ribosomal protein S24 isoform X1 [Anoplophora glabripennis] >gi|1325356752|ref|XP_023312619.1| 40S ribosomal protein S24 isoform X1 [Anoplophora glabripennis])

HSP 1 Score: 216.853 bits (551), Expect = 4.125e-70
Identity = 108/136 (79.41%), Postives = 120/136 (88.24%), Query Frame = 0 
Query:   20 MSEGTITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKCTPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKKAKVGSAAKKGGK 155
            M+EGT T+RTRK+M+NRLLARKQMVVDVLHP + SV KTDIREKLAKMYK TPD V  FGFRTNFGGGKS+GFALIYDT+DFAKKFEPK RL R G  EK  +T RKQ+KERKNRMKKVRGTKK+KVG+A+KKGGK
Sbjct:    1 MTEGTATIRTRKFMTNRLLARKQMVVDVLHPGQPSVKKTDIREKLAKMYKVTPDVVFVFGFRTNFGGGKSTGFALIYDTLDFAKKFEPKHRLARHGLYEKKQQT-RKQRKERKNRMKKVRGTKKSKVGAASKKGGK 135
[Close]
BLAST of 40s ribosomal protein s24 vs. nr
Match: gi|225713376|gb|ACO12534.1| (40S ribosomal protein S24 [Lepeophtheirus salmonis])

HSP 1 Score: 215.312 bits (547), Expect = 1.696e-69
Identity = 99/128 (77.34%), Postives = 115/128 (89.84%), Query Frame = 0 
Query:   25 ITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKCTPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKKAKVGSAAKK 152
            +TVRTRKYM+NRLL RKQM+VDVLHPN+++V KT+IREKLAKMYKCTPDRV AFG+RTNFGGGK++GFA+IYDTMDFAKKFEPK+RL RQG +E+  +  RKQKKERKNRMK VRGTKKA +GS  KK
Sbjct:    5 VTVRTRKYMNNRLLNRKQMIVDVLHPNRSTVPKTEIREKLAKMYKCTPDRVFAFGYRTNFGGGKTTGFAIIYDTMDFAKKFEPKYRLARQGVIERATKQSRKQKKERKNRMKTVRGTKKASIGSGGKK 132
[Close]
BLAST of 40s ribosomal protein s24 vs. nr
Match: gi|961375714|gb|ALS04601.1| (40S ribosomal protein S24 [Pseudodiaptomus poplesia] >gi|961375716|gb|ALS04602.1| 40S ribosomal protein S24 [Pseudodiaptomus poplesia] >gi|961376426|gb|ALS04957.1| 40S ribosomal protein S24 [Pseudodiaptomus poplesia])

HSP 1 Score: 214.157 bits (544), Expect = 5.021e-69
Identity = 100/133 (75.19%), Postives = 117/133 (87.97%), Query Frame = 0 
Query:   20 MSEGTITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKCTPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKKAKVGSAAKK 152
            +++G +T+RTRKYM+NRLL R+QM+VDVLHP KASV KT IREKLA MYKCTPDRV  FGF+TNFGGGKS+GFAL+YDTMD+AKKFEPK+RL RQG +EK  +  RKQ KERKNRMKKVRGT KAKVG+A+KK
Sbjct:    2 VADGNVTLRTRKYMTNRLLCRRQMIVDVLHPGKASVPKTTIREKLATMYKCTPDRVFTFGFQTNFGGGKSTGFALVYDTMDYAKKFEPKYRLHRQGAVEKKAKIARKQTKERKNRMKKVRGTAKAKVGAASKK 134
[Close]
BLAST of 40s ribosomal protein s24 vs. nr
Match: gi|91079684|ref|XP_967577.1| (PREDICTED: 40S ribosomal protein S24 isoform X2 [Tribolium castaneum] >gi|1004401420|gb|EFA00935.2| 40S ribosomal protein S24-like Protein, partial [Tribolium castaneum])

HSP 1 Score: 213.001 bits (541), Expect = 1.423e-68
Identity = 106/133 (79.70%), Postives = 117/133 (87.97%), Query Frame = 0 
Query:   20 MSEGTITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKCTPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKKAKVGSAAKK 152
            M+EGT T+RTRK+M+NRLL RKQMVVDVLHP +ASV KTDIREKLAKMYK TPD V  FGFRTNFGGGKS+GFALIYDT+DFAKKFEPK RL R G  EK  +T RKQ+KERKNRMKKVRGTKK+KVG+AAKK
Sbjct:    1 MTEGTATIRTRKFMTNRLLCRKQMVVDVLHPGQASVKKTDIREKLAKMYKVTPDVVFVFGFRTNFGGGKSTGFALIYDTLDFAKKFEPKHRLARHGLFEKKQQT-RKQRKERKNRMKKVRGTKKSKVGAAAKK 132
[Close]
BLAST of 40s ribosomal protein s24 vs. nr
Match: gi|1133421724|ref|XP_019866499.1| (PREDICTED: 40S ribosomal protein S24 isoform X3 [Aethina tumida])

HSP 1 Score: 211.846 bits (538), Expect = 3.237e-68
Identity = 106/133 (79.70%), Postives = 117/133 (87.97%), Query Frame = 0 
Query:   20 MSEGTITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKCTPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKKAKVGSAAKK 152
            M+EGT T+RTRK+M+NRLLARKQMVVDVLHP + SV KTDIREKLAKMYK TPD V  FGFRTNFGGGKS+GFALIYDT+DFAKKFEPK RL R G  EK  +T RKQ+KERKNRMKKVRGTKK+KVG+AAKK
Sbjct:    1 MTEGTATIRTRKFMTNRLLARKQMVVDVLHPGQPSVKKTDIREKLAKMYKVTPDVVFVFGFRTNFGGGKSTGFALIYDTLDFAKKFEPKHRLARHGLYEKKQQT-RKQRKERKNRMKKVRGTKKSKVGAAAKK 132
[Close]
BLAST of 40s ribosomal protein s24 vs. nr
Match: gi|1130222552|ref|XP_019757839.1| (PREDICTED: 40S ribosomal protein S24 isoform X1 [Dendroctonus ponderosae])

HSP 1 Score: 211.46 bits (537), Expect = 5.416e-68
Identity = 105/136 (77.21%), Postives = 117/136 (86.03%), Query Frame = 0 
Query:   20 MSEGTITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKCTPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKKAKVGSAAKKGGK 155
            M+EGT T+RTRK+M+NRLL RKQMVVDVLHP + SV KTDIREKLAKMYK TPD +  FGFRTNFGGGKS+GF LIYDT+DFAKKFEPK RL R G  EK V+  RKQ+KE+KNRMKKVRGTKK KVG+AAKKGGK
Sbjct:    1 MTEGTATIRTRKFMTNRLLCRKQMVVDVLHPGQPSVKKTDIREKLAKMYKVTPDVIFVFGFRTNFGGGKSTGFGLIYDTLDFAKKFEPKHRLQRHGLYEK-VKQTRKQRKEKKNRMKKVRGTKKTKVGAAAKKGGK 135
[Close]
BLAST of 40s ribosomal protein s24 vs. nr
Match: gi|1080070892|ref|XP_018577873.1| (40S ribosomal protein S24 isoform X2 [Anoplophora glabripennis] >gi|1325356754|ref|XP_023312620.1| 40S ribosomal protein S24 isoform X2 [Anoplophora glabripennis])

HSP 1 Score: 211.075 bits (536), Expect = 7.865e-68
Identity = 105/133 (78.95%), Postives = 117/133 (87.97%), Query Frame = 0 
Query:   20 MSEGTITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKCTPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKKAKVGSAAKK 152
            M+EGT T+RTRK+M+NRLLARKQMVVDVLHP + SV KTDIREKLAKMYK TPD V  FGFRTNFGGGKS+GFALIYDT+DFAKKFEPK RL R G  EK  +T RKQ+KERKNRMKKVRGTKK+KVG+A+KK
Sbjct:    1 MTEGTATIRTRKFMTNRLLARKQMVVDVLHPGQPSVKKTDIREKLAKMYKVTPDVVFVFGFRTNFGGGKSTGFALIYDTLDFAKKFEPKHRLARHGLYEKKQQT-RKQRKERKNRMKKVRGTKKSKVGAASKK 132
[Close]
BLAST of 40s ribosomal protein s24 vs. nr
Match: gi|69608490|emb|CAJ01864.1| (ribosomal protein S24e [Biphyllus lunatus])

HSP 1 Score: 211.075 bits (536), Expect = 8.399e-68
Identity = 106/133 (79.70%), Postives = 117/133 (87.97%), Query Frame = 0 
Query:   20 MSEGTITVRTRKYMSNRLLARKQMVVDVLHPNKASVAKTDIREKLAKMYKCTPDRVVAFGFRTNFGGGKSSGFALIYDTMDFAKKFEPKFRLVRQGTLEKPVRTGRKQKKERKNRMKKVRGTKKAKVGSAAKK 152
            M+EGT T+RTRK+M+NRLL RKQMVVDVLHP + SV KTDIREKLAKMYK TPD V AFGFRTNFGGGKS+GFALIYDT+DFAKKFEPK RL R G  EK  +T RKQ+KERKNRMKKVRGTKK+KVG+AAKK
Sbjct:    1 MTEGTATIRTRKFMTNRLLCRKQMVVDVLHPGQPSVKKTDIREKLAKMYKVTPDVVFAFGFRTNFGGGKSTGFALIYDTLDFAKKFEPKHRLGRHGLFEKKQQT-RKQRKERKNRMKKVRGTKKSKVGAAAKK 132
The following BLAST results are available for this feature:
BLAST of 40s ribosomal protein s24 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000022141.070e-7276.56supercontig:LSalAtl2s:LSalAtl2s141:401789:402187:-... [more]
EMLSAG000000091835.254e-1460.00supercontig:LSalAtl2s:LSalAtl2s581:230247:235468:1... [more]
back to top
BLAST of 40s ribosomal protein s24 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
gi|20140134|sp|Q962Q6.1|RS24_SPOFR6.498e-6876.69RecName: Full=40S ribosomal protein S24[more]
gi|3122816|sp|O42387.1|RS24_TAKRU1.582e-6272.87RecName: Full=40S ribosomal protein S24[more]
gi|20140088|sp|Q90YQ0.1|RS24_ICTPU1.076e-6170.54RecName: Full=40S ribosomal protein S24[more]
gi|20140347|sp|Q9W6X9.1|RS24_ORYLA3.936e-5968.99RecName: Full=40S ribosomal protein S24[more]
gi|75041916|sp|Q5RAQ8.1|RS24_PONAB1.649e-5269.77RecName: Full=40S ribosomal protein S24 >gi|912076... [more]
gi|51338620|sp|P62850.1|RS24_RAT6.248e-5269.53RecName: Full=40S ribosomal protein S24 >gi|513386... [more]
gi|133863|sp|P02377.1|RS24_XENLA7.372e-5268.99RecName: Full=40S ribosomal protein S24; AltName: ... [more]
gi|115502823|sp|Q8LC83.2|RS242_ARATH1.451e-5158.96RecName: Full=40S ribosomal protein S24-2[more]
gi|75076037|sp|Q4R5H5.1|RS24_MACFA3.340e-5168.99RecName: Full=40S ribosomal protein S24[more]
gi|6093881|sp|O59865.3|RS24B_SCHPO5.802e-4962.10RecName: Full=40S ribosomal protein S24-B[more]

Pages

back to top
BLAST of 40s ribosomal protein s24 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|225718518|gb|ACO15105.1|1.222e-7076.5640S ribosomal protein S24 [Caligus clemensi][more]
gi|1133421720|ref|XP_019866497.1|1.334e-7080.15PREDICTED: 40S ribosomal protein S24 isoform X1 [A... [more]
gi|1080070890|ref|XP_018577872.1|4.125e-7079.4140S ribosomal protein S24 isoform X1 [Anoplophora ... [more]
gi|225713376|gb|ACO12534.1|1.696e-6977.3440S ribosomal protein S24 [Lepeophtheirus salmonis... [more]
gi|961375714|gb|ALS04601.1|5.021e-6975.1940S ribosomal protein S24 [Pseudodiaptomus poplesi... [more]
gi|91079684|ref|XP_967577.1|1.423e-6879.70PREDICTED: 40S ribosomal protein S24 isoform X2 [T... [more]
gi|1133421724|ref|XP_019866499.1|3.237e-6879.70PREDICTED: 40S ribosomal protein S24 isoform X3 [A... [more]
gi|1130222552|ref|XP_019757839.1|5.416e-6877.21PREDICTED: 40S ribosomal protein S24 isoform X1 [D... [more]
gi|1080070892|ref|XP_018577873.1|7.865e-6878.9540S ribosomal protein S24 isoform X2 [Anoplophora ... [more]
gi|69608490|emb|CAJ01864.1|8.399e-6879.70ribosomal protein S24e [Biphyllus lunatus][more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1280_size50848supercontigscaffold1280_size50848:3829..9728 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1280_size50848-snap-gene-0.11-mRNA-1maker-scaffold1280_size50848-snap-gene-0.11-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1280_size50848:3829..9728-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1280_size50848-snap-gene-0.11 ID=maker-scaffold1280_size50848-snap-gene-0.11|Name=40s ribosomal protein s24|organism=Tigriopus kingsejongensis|type=gene|length=5900bp|location=Sequence derived from alignment at scaffold1280_size50848:3829..9728- (Tigriopus kingsejongensis)
GGCCCAGGACTTGCTGGCCGGATCAGCTGATGAAGCTTCCTTTTCCTCGA
TCAACACAACTGACAAGATGGTAAGAATGGGTATGCGGCTCGAAATCCGG
TCCAATCTGAGCCCATCGGGCCCGGACTCGAGGGGCGGAGCGCGGGGGCG
GGTCATGGGACTGTATGGAAACTAACGGCCACGGTCTGGTCATTGCAGTC
GGAAGGTACGATCACCGTGCGCACCCGCAAGTACATGAGCAACCGTCTGC
TGGCTCGCAAGCAGATGGTGGTGGACGTGCTCCACCCCAACAAGGCCTCG
GTGGCCAAGACCGACATCCGCGAGAAGCTGGCCAAGATGTACAAGTGCAC
CCCGGACCGAGTGGTGGCCTTCGGCTTCCGCACCAACTTCGGCGGCGGCA
AGTCCTCCGGCTTCGCCCTCATCTACGACACCATGGACTTCGCCAAGAAG
TTCGAGCCCAAGTTCCGCCTGGTCCGCCAAGGCACGCTCGAGAAGCCCGT
GCGAACGGGTCGCAAGCAGAAGAAGGAGCGCAAGAACCGCATGAAGAAGG
TCCGCGGCACCAAGAAGGCCAAGGTCGGATCGGCCGCCAAGAAGGTGAGA
GCCCGCATTCTGACACCCCCCGACTAGAGCGACCTAGACTGGAGAGACTA
GTGATGCTAGTGATAATGGAGTGACGAGAGAGACTGCGACTAGAGAGACT
AGAGAGATATTAGTGAGACTGGAGCGACTAGAGAGTCTCTAGACTGGCGA
GACCTAGAGAGACTAGAGAGACTTAGAGCGACTTAGAGAGACCTAGACTA
GTGAGACTAAGAGAGAGCTAGAGAGACACAAGTGAGACTAGAGCGACCTA
GAGAGACCTAGAGAGTCTCTCTAGACTAGAGACACAAGTGAGACTAGAGA
AACTTGAAGAGACTTAGAGAGACTTAGAGAGACTTGAAGAGACCTAGAGA
GTCTCTAGACTAAAGAGACAAAAGTGAGACTAGAGCAACTTCGAGAGACC
TAGAGAAAGCTAGAGAGACCTAGAGAGTCTCTCTAGACTAGAGAGACTAG
ACACAAGTGAGACTAGAGAAACTTGGAGAGACTTAGAGAGACCTAGAGAG
ACACTAGAGAGACTAGAGCGGCCTAGAGAAACCTAGAGAGTCTCTCTTGA
CTAGTGAGACTTGGAGAGACCTAGAGAGACACTCGAGACTCAAGTGAGAC
TTAAGAGAGACACTAGAGACTCACGTGAGACTAGAGCGACTTAGAGAGAC
CAAGAGAAACTTAGAGAGACCTAGAGAGTCCCTCTAGACTAGACAGACTA
GAGACACAAGTGAGACCATAGAGACAAGTGAGACTAGAACAACTTAGAGC
GACTTAGAGAGACCTAGAGAAACTTGGAGAGACCTAGAGAGTCCCTCTAG
ACTAGGGACACTAGAGACACAAGTGAGACTAGAGAGACACTAAAGAGAGA
CCTAGAGAGACACTCGAGAGACCTAGAGAGACACTCGAGAGACCTAGAGA
GACACAAGTGAGACTAGAGCGACTTAGAGAGGCCTAGAGAAACTTAGAGA
GACCTAGAGAAACTTAGAGAAACTTAGACAGACCTAGAGAGTCTCTCTAG
ACTAGTGAGACTTAGAGAGACTAGAGACACAAGTGAGACTAGAGCGAGTT
AGAGAAACTTAGAGAGACCTAGAGAGTCTCTCTAGACTAGTGAGACTTAG
AGAGACTAGAGACACAAGTGAGACTAGAGCGAGTTAGAGAAACTTAGAGA
GACCTAGAGAGTCTCTCTAGACTAGTGAGACTTAGAGAGACTAGAGACAC
AAGTGAGACTAGAGCGAGTTAGAGAAACTTAGAGAGACCTAGAGAGTCTC
TCTAGACTAGTGAGACTTAGAGAGACTAGAGCGAGTTAGAGAGACTAAGA
GAGACTAGAGAGCAGTCTCATAGTGGTGTGTTATAGCACCTTTCGGTGGT
TTTGTGTTCGCACCATGGACAGGGCATCCATGGGAACACGGCCCACTGAT
GGTATTAGCTAATTTGAGCTATTCGCTGTGCCACCACTCCTTTAATTTGG
GGGAAACCAGAAGCAACCCGTCCTCAAGATGTGGCCGCACCTGTGTGCTT
GACCCCCCAGGGACAAGTAGGGTTACAGGGAGTCGTCAGCTCCCCTCAGT
AGAAGAAAGGTTGGAGGGACGAAAGTGTCTTTATCCGCCGGGCCTGGGAA
TCGATCTGCAGACCATCTCACCCATTCAATCTTCTCAAGCAACCTTGGAA
AGGGGATAAGCGTCAGAGGGCTCTACTCAATTAGTAAAAGGACTCAATGT
CAGTGAACTTGGAACATGTTCCCGGTGTCTCAGATTGTTGTGTCTGGCTA
AAACATTGGCCTGGGTAAGACTTGTAGTCTGACCGTTTTGGTGGCCGCGT
GCTTGATTTTGTGGGCAACTATAAGCTGGCACTCGCACTTGTGGATGCTT
TGATGGGGGTAGTGACTAGAGCGACTTGGAGAGACTAGAGGAGAGATGCG
ACAGCGCTCAATGAGCGAAAATCTCAAAATTAGAGCGGAAATATTTCTCC
CTGCCCAACCCTAACCTCGCTGAAGGCAGAATCCACTTACAGTGCGACGC
CGCTAGATGGGTCTGTCAGGATCTAAGTACAGCGAGGTTAATGTTTGGTG
GGGAGAGAAACTTCCCCTCTAATTTTGAGATCCTGGCTAATTGAGGGAGG
TCGTCTCTCTGATAGTTTCTCTGAGCCCGACATGCTTACATACACCCCGA
TTCGAGCACTGGATCCTTGCGTGGGTCACGTGTCCATTGAGGCTAGTGCC
CTCGGGACCACCACGCCCGGCCCCACCCACTGGGCGACCCGACCGGGAGC
GAACCCGGCTCAATTGTCCCGGGTAGGGCATGGCGTACTCGAAACCCTTG
AGGGTCGCACTGAACGAAAAATGGGTCGAAAGGCGGCATGGTTCAGGCAG
TTAAAGGTCAACTATTTTGGGCTTGGACTTAAGCATGGCGTACTAGAATC
ACTTGGGAGGTCGCACAGAACGAAAAATATGTCCAAAGTTCAGGAAGCTC
GAAAGCCGTTGATGCCATCAATTAACGGGCGGGAGTTGCAGGGATATTTC
GCCCAGTTCCGCAGGGTTGTCGAGAGACTAGTGGACAGACCCCCGATCCC
GGCGAGGTATAAACCCTACCGAACGGGTCGCAATGTCATGCACACCTCCA
GTCCGACCATGGTTGGCGTGAACGGCTTTCGAGCTGCTTGTACTTGAGCT
TCGCCTTAGGACCCATTTTTCGTTCGAGGCGACCGCCAGGCGATTAGAGT
ACTCCATGGGGTAGGGGAACAGACCAGACTCAGGGCGGTCCACAATGGCT
GAGTGACCCTCTTGGATGATGGGATGGCGGTCGTGGGCCGAAGTGGTTTC
GTCAACTAGCGCATGGAGCTCTACACAAGAACGAGATGGAGTGGAAGCTT
CAAGCACATGCGTTCTCAGGCCGAGATGCTGGGCCCCTTCGGCCGGCCTT
GATCGGCTCGATTAGCCGAAGGAGGTCTAGAATTGGCCACGCTCTGCCTC
GGAATGCATATTCTTGAAGTCACGGGACCATTTTTGGGGGCTTCCATCTA
GTTCTTTTGTAGAACTCATCGTCTTACGCTGGCCAGACTTGAGGCCCACG
GTAAAAGTGACCCAATTTTCCCATCGGAAATGCGGATGCCTTCAGCACCA
AATTGGTGGCCCCAGTAGATAATCAGTGCCCAAGAGTGCCGTGCGTCAGC
CAAATTATCTGGCATTCGTTTTCCTGATTGGCCACCAGTTCCAGCGCCAG
CTTTTTATGGCTCGATTCCTGTTTCTATAAATTGGGTCACTCTGAAGGTA
CTATCGTGAGCCATGGAGTTGTTCCAGTTCCCCTGGGCTAGCTTACCTAG
ATTATAAGGGCTAGGATCACTCGGGCGTAGTTGCCATACTGTTAGGGATA
GGTTTGATTTAGCCTAGCCCTACTCTACTGGGACCGACTCGAAAAGGACG
GGGCTACGATAAATCACGTCCATAACCTCCGCCAGCGTTTGGCTATTGCG
CCAATTGGCCCATGTCCCGGCCCAAAGTGGGACCATCTCCACTTCACGAG
TAGGTACAGCTTTTACCCCTAGGCTGGATGATTTGTCCAAAATACCGCCC
CCTGTCATGGACGCGAGTGGCCGTCTCATGTTCCCAGGTCCGAAAAGTTT
CTTAGTAAGCAAGGCTAGCACAGTCGGGTGGTTATGTCCTTGAGCCAGTG
GGTGACTCGAATGAAGGTACTCGCAGGGTGGCTCTCCGGGATATCCCGCT
GACGCCCTCGGACCAAATCTGTGACTGTGTTCCGATTACACGATCAAAGC
CGAGCTCCCACCGGGTGCTCGTTTGGGGGATCTCAAAGTTATGCGTATTC
ACGGAGCCCAAAATATAGAAAAGTGGGCCTCAAAATAAAGAGCAACGAAA
TGGTTTATGGAGCCCTCTATAGCTATTTTTTTGAGACCAGTCTCGATTCC
ACTCGATCAGCATCGGGTCCTGCATGTGGTTCTGCGTGTAGCGGTTGTAC
TTGCTTAAGCGATCCTGGCAAGTGCTGAAAACCCTCGCCCAGTCCCAGGA
CGTCAATGGAGCTCATCTGAAGCTGGCCATGACGTTGGGGTCCTCCCTCA
GACCCGGCCCCTTTTCCCCACTGAGGGTTCATCCGATCGAAGGCCTTTTT
GCCTGGAAATGGGTGAACAAGTCCAGTCTGAAATGCTAGTCAGGCGTAAA
AATGCCCAGGAGGGTCTTAACTGTTGAAACCACCTAATTGGCATAATTGT
GAAATCACTTTATCACCATGACTTCATGGGCCAGGGTTGCTTTGAAGTGG
CACATTTAAATCAAAGGGGGCCAGACACCGTAGATATGGCCGAGCAGGTC
CCAAGTAAGGCTCGACCCGGAGTTCCGTCCAGGAGAACTACTACTTGTCA
AGGAATTCCCTCGCAAACCTGAGGCTTGAACGAAAAGGTGAAGAGCCCTA
ATCTTGTAACCTCTTCGGCCCAGAGGCACCGAGTGGTCTGGAACCAGTGA
CACGGCAAGATCTCGGCCCGAAAGCATGGGCTTGCCTCCAATTAGCCCGA
TTACACACTTCAAAGGGGGTTGGTCATTGACTTGTGCATTCCATCAAACC
TGGACTGCCCATTCTGGCTCGGGGAGCATGTAGAGCTGGGTGTCATTTTT
CCATCTAGTACAAGCTGCCACTTGGATCGACATGAACCGATTGGTTATGC
TGTGAAGGAAGCTGTGTTTCAAGTCACCCATTACCCCATTTGGGTAAGAC
CAAGTCGGGAAATGGAGCATCACCCAAGGGTTAAGGGATGATAAGTTTTA
ATCGGTATGTGAGAGGCTCCAGCTCTAGCCACATTCATGGGCACAGAGTG
GAAGCCAACAGTCCATTGAGGAGAATAATGAGCTCTTGGGTTTGTCTGCT
TTTAGGGTGGCAAGCATTGAAGTGGCTCCGATGTTTCACCTGCCCATCCA
GCCATAGTGGGTAATCCCATGAGTGCGATCCAGTTCAGATCCAATTTTTA
ACCATAACCCCCTCGAGTTTGACTGATCCTCCATGACCAAATTTAGAGAT
GTCCTGCCGAGCTTGAGGGTTGAAATCCCATTAAGCCCTTCCCACCCATG
AGCCACGACTACATAGGGTTTTGAATACGATTGATTTTGAGCCCATTAAC
TGCCTTGCATTTTGATCTAACCCCCCTCGTTTGTCTCTCGGTCTCACTCA
TGGAATGTTATGTGCTAATCCATTCTCGGTGTTTCTTTTTCAGTAAATGG
ACTTGTGTCACCTACCTTTTCCTCATGAAGGGCTGTTCCACGTCGATTAT
CTGCGCGATTATGGCTTTCCAGAGGATCCCCAATAAACGATTATGAACAG
back to top
Synonyms
The feature '40s ribosomal protein s24' has the following synonyms
Synonym
Tk06600
Add to Basket