apolipoprotein l3- partial, maker-scaffold1315_size48675-snap-gene-0.11 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of apolipoprotein l3- partial vs. SwissProt
Match: gi|143811364|sp|Q9BPW4.3|APOL4_HUMAN (RecName: Full=Apolipoprotein L4; AltName: Full=Apolipoprotein L-IV; Short=ApoL-IV; Flags: Precursor) HSP 1 Score: 55.8398 bits (133), Expect = 1.499e-7 Identity = 51/152 (33.55%), Postives = 78/152 (51.32%), Query Frame = 0 Query: 27 LEDQLSNLSPEEYEKRKAEAIAGIQSLEVEFREWV-----QFR---EETIRQLREIADYVEKVFRRAGRTKIASSGGSVLAGGVTVVGGILTLASGGLALPILVAGAGLGLASGLTGGAAAVSEKVIKSKSMKKAE-KALQLDAERTEELES 169 L + L NL+P + K +Q E +FREW Q R +E+I +LR IA+ +EKV R + S +L +V+G +L + GL+L I AG GLG+AS G A+++ E + + AE A +L A T++LE+ Sbjct: 79 LYEALKNLTPYVAIEDK-----DMQQKEQQFREWFLKEFPQIRWKIQESIERLRVIANEIEKVHRGCVIANVVSGSTGIL----SVIGVMLAPFTAGLSLSITAAGVGLGIASATAGIASSIVE----NTYTRSAELTASRLTATSTDQLEA 217
BLAST of apolipoprotein l3- partial vs. nr
Match: gi|1325323331|ref|XP_023343504.1| (uncharacterized protein LOC111712970 [Eurytemora affinis]) HSP 1 Score: 115.161 bits (287), Expect = 1.142e-26 Identity = 59/130 (45.38%), Postives = 87/130 (66.92%), Query Frame = 0 Query: 27 LEDQLSNLS--PEEYEKRKAEAIAGIQSLEVEFREWVQFREETIRQLREIADYVEKVFRRAGRTKIASSGGSVLAGGVTVVGGILTLASGGLALPILVAGAGLGLASGLTGGAAAVSEKVIKSKSMKKAE 154 LED +S L + EK E I+ LE + W + RE TI +LREIADY++ + ++ G +I S G ++AG +T+ GG++T+ + G A P+LVAGAG+GLASGLTGGAA +++K++ SK MK+ E Sbjct: 113 LEDAISRLKEVTDISEKDVQEITYEIRHLEEKLHLWREVRERTIYRLREIADYIDSIGKKTGFARIVGSSGGIIAGSLTIAGGVMTVMTAGAAAPVLVAGAGIGLASGLTGGAATITKKILASKQMKEEE 242
BLAST of apolipoprotein l3- partial vs. nr
Match: gi|1187545846|ref|XP_020726648.1| (apolipoprotein L3-like [Odocoileus virginianus texanus] >gi|1187545848|ref|XP_020726649.1| apolipoprotein L3-like [Odocoileus virginianus texanus] >gi|1187545850|ref|XP_020726650.1| apolipoprotein L3-like [Odocoileus virginianus texanus] >gi|1187545852|ref|XP_020726651.1| apolipoprotein L3-like [Odocoileus virginianus texanus]) HSP 1 Score: 79.7221 bits (195), Expect = 3.080e-13 Identity = 86/297 (28.96%), Postives = 148/297 (49.83%), Query Frame = 0 Query: 4 SETNVQVLEENLDDLQVIVSEEDLEDQLSNLSPEEYEKRKAEAIAGIQSLEVEFREWVQFREETIRQLREIADYVEKVFRRAGRTKIASSGGSVLAGGVTVVGGILTLASGGLALPILVAGAGLGLASGLTGGAAAVSEKVIKSKSMKKAE-KALQLDAERTEELESSLKEYRKRIVAQQIIQELVSGGAWGTFNGYQVVSVLGAGIGFTQSSGKVIMAVSGETLGSEF--TKLAAVNSGRLLAGTITIVVGGALMAYDIYQLAQGIQGFAQ-MGPEGAADIRQIANELEAQMEILT 296 S + VL E+L L ++ ED D+L ++Y++ K + EF + Q +E+I++LRE+AD+V+KV R + + +S + +G ++++G +L + GL+L + V G GLG A+ +TG + V EKV +M AE +A LD + + L Y + + I V+ G Q+V+ I ++G+V + S + + + F T LA + R+++G V G +A D+Y L + Q + E A ++RQ A ELE ++E LT Sbjct: 51 SREDADVLREHLIKLLTDLARED-PDRL-----QKYQQEKERFLK-------EFPQVKQELKESIKKLRELADHVDKVHRDCTISNVVASSTGIASGTLSILGLVLAPFTAGLSLGLSVTGIGLGAAAAVTGVSTMVVEKV----NMSSAETQASLLDTAQI--ISYGLDLYEVKDFGRHIHAIRVARG------NPQLVATAQHYI----TTGRVSVQ-SAQQVRNHFRGTPLAMGRTARIVSG----VTSGLFLALDVYSLVKDAQDLQEGAKTESAENMRQKARELETKLEELT 313
BLAST of apolipoprotein l3- partial vs. nr
Match: gi|1270065514|ref|XP_022795447.1| (uncharacterized protein LOC111334028 [Stylophora pistillata] >gi|1263126233|gb|PFX22590.1| Apolipoprotein L domain-containing protein 1 [Stylophora pistillata]) HSP 1 Score: 77.411 bits (189), Expect = 1.095e-12 Identity = 69/255 (27.06%), Postives = 117/255 (45.88%), Query Frame = 0 Query: 50 IQSLEVEFREWVQFREETIRQLREIADYVEKVFRRAGRTKIASSGGSVLAGGVTVVGGILTLASGGLALPILVAGAGLGLASGLTGGAAAVSEKVIKSKSMKKAEKALQLDAERTEELESSLKEYRKRIVAQQIIQELVSGGAWGTFNGYQVVSVLGAGI-GFTQSSGKVIMAVSGETL----GSEFTKLAAVNSGRLLAGTITIVVGGALMAYDIYQLAQGI-------QGFAQMGPEGAADIRQIANELEAQM 292 + + E R W+ R+ T+R LRE+AD +++ +++ S GSV V VG L+ + G +L + AG G+ GLT + +++ I+ + K+A+ + D + TE+++ L E I+E G A +++G Q + + F + KV + V+ L G+ FT L + + G VV AL+ YDIY L +G PE +RQ+A++LE M Sbjct: 11 VYEFKSEIRVWIPKRKTTVRILRELADKLKEHHTNVCIAQVSGSAGSVFGFTVAAVGFGLSFVTFGASLVVAAAGMGIATVGGLTNAGSTLAKIFIERDTYKEAQNIIDDDRKTTEKIKELLTE----------IEESTVGKA--SWHGLQAATSGACTVYKFVDAGFKVGVRVASPALAEGGGALFTGLRGFSRVAHIGG---FVVNAALLPYDIYTLVTNALEIDAARKGENDKEPEAVKKLRQLADDLEKDM 250
BLAST of apolipoprotein l3- partial vs. nr
Match: gi|742204979|ref|XP_010858834.1| (PREDICTED: apolipoprotein L3-like [Bison bison bison] >gi|742204983|ref|XP_010858835.1| PREDICTED: apolipoprotein L3-like [Bison bison bison]) HSP 1 Score: 78.1814 bits (191), Expect = 1.276e-12 Identity = 84/292 (28.77%), Postives = 140/292 (47.95%), Query Frame = 0 Query: 10 VLEENLDDLQVIVSEEDLEDQLSNLSPEEYEKRKAEAIAGIQSLEVEFREWVQFREE---TIRQLREIADYVEKVFRRAGRTKIASSGGSVLAGGVTVVGGILTLASGGLALPILVAGAGLGLASGLTGGAAAVSEKVIKSKSMKKAEKALQLDAERTEELESSLKE-YRKRIVAQQIIQELVSGGAWGTFNGYQVVSVLGAGIGFTQSSGKVIMAVSGETLGSEFTKLAAVNSGRLLAGTITIVVGGALMAYDIYQLAQGIQGFAQMGPEGAA-DIRQIANELEAQMEILT 296 VL E L +Q +++ ED ED+L N Y+++K E +E+ Q +EE +IR+L E+AD V+KV R + + +S + +G ++++G +L +GGL+L + AG GLG AS +TG +S V+++ ++ AE Q T E++ + + Y+ + + I V+ G Q + G QS+ +V G T LAA R+ G V+ M D+Y L + Q + +A ++RQ A ELE ++E LT Sbjct: 58 VLREYLTKVQTVLAGED-EDRLQN-----YQQKK----------ERFLKEFPQVKEELKESIRKLHELADNVDKVHRDCTISNVVASSTGIASGALSILGLVLAPFTGGLSLGLSAAGIGLGAASAVTG----ISTMVVENVNLSSAET--QAGHINTAEIKCYVNDLYQVKDFGRHIRAIRVARGNPELLPTAQ--HCITTGQVLVQSAQQVSTHFRG-------TALAATRGARIGGG----VLSALSMGLDVYSLVKDAQELQEGAKTASAENMRQKAQELEKELEKLT 314
BLAST of apolipoprotein l3- partial vs. nr
Match: gi|1270042308|ref|XP_022783023.1| (apolipoprotein L2-like [Stylophora pistillata]) HSP 1 Score: 76.6406 bits (187), Expect = 3.864e-12 Identity = 47/125 (37.60%), Postives = 76/125 (60.80%), Query Frame = 0 Query: 56 EFREWVQFREETIRQLREIADYVEKVFRRAGRTKIASSGGS---VLAGGVTVVGGILTLASGGLALPILVAGAGLGLASGLTGGAAAVSEKVIKSKSMKKAEKALQLDAERTEELESSLKEYRKR 177 E RE + E I L E AD+++KV+R +IAS+ G+ +L G +T+ GGI T + G A P+L+AG LG A+ TG + A +E V+ SK ++KAEKALQ+ + +++ + E+++ Sbjct: 35 EVREMNHAKLEAIICLNEAADHLDKVWRDC---RIASAIGNSVGILGGALTIGGGIATFLTAGAATPLLMAGISLGAAAAGTGLSTATAEAVVNSKQIRKAEKALQIADQLRRKVKEQVNEWKQN 156
BLAST of apolipoprotein l3- partial vs. nr
Match: gi|803289043|ref|XP_012004181.1| (PREDICTED: apolipoprotein L3-like isoform X2 [Ovis aries musimon]) HSP 1 Score: 76.6406 bits (187), Expect = 4.380e-12 Identity = 83/290 (28.62%), Postives = 139/290 (47.93%), Query Frame = 0 Query: 11 LEENLDDLQVIVSEEDLEDQLSNLSPEEYEKRKAEAIAGIQSLEVEFREWVQFREETIRQLREIADYVEKVFRRAGRTKIASSGGSVLAGGVTVVGGILTLASGGLALPILVAGAGLGLASGLTGGAAAVSEKVIKSKSMKKAEKALQLDAERTEELESSL---KEYRKRIVAQQIIQELVSGGAWGTFNGYQVVSVLGAGIGFTQSSGKVIMAVSGETLGSEFTKLAAVNSGRLLAGTITIVVGGALMAYDIYQLAQGIQGFAQMGPEGAA-DIRQIANELEAQMEILT 296 L E L +Q +++ ED +D+L ++Y++ K + EF + Q +E I++LRE+AD V+KV R + + +S + +G ++++G L + GL+L + AG GLG AS +TG + V E V S + +A L+ ++ + S L K+ R+ I A I+E Q+V+ + I Q S VS G T LA + R+ +G V+ G + D+Y L + Q + +A ++RQ A ELE ++E LT Sbjct: 59 LREYLIKVQTVLAGED-QDRLL----QKYQQEKERFLK-------EFPQVKQELKENIKKLRELADSVDKVHRDCTISNVVASSTGIASGALSILGLFLAPFTAGLSLGLSAAGIGLGAASAVTGLSTMVVENVNTSSAESQASS---LNTDKVKCCLSDLYQVKDLRRHIHA---IRE--------ARRNPQLVATAQSHIETWQLSDPAPQEVSTHFGG---TPLAMTRAARIGSG----VLSGVFIGLDVYSLVKDAQDLQEGAKTASAENMRQKAQELEKKLEELT 315
BLAST of apolipoprotein l3- partial vs. nr
Match: gi|1263134063|gb|PFX30239.1| (Apolipoprotein L3 [Stylophora pistillata]) HSP 1 Score: 77.411 bits (189), Expect = 5.235e-12 Identity = 48/133 (36.09%), Postives = 80/133 (60.15%), Query Frame = 0 Query: 48 AGIQSLEVEFREWVQFREETIRQLREIADYVEKVFRRAGRTKIASSGGS---VLAGGVTVVGGILTLASGGLALPILVAGAGLGLASGLTGGAAAVSEKVIKSKSMKKAEKALQLDAERTEELESSLKEYRKR 177 A +++ E RE + E I L E AD+++KV+R +IAS+ G+ +L G +T+ GGI T + G A P+L+AG LG A+ TG + A +E V+ SK ++KAEKALQ+ + +++ + E+++ Sbjct: 27 AELKAFTEEVREMNHAKLEAIICLNEAADHLDKVWRDC---RIASAIGNSVGILGGALTIGGGIATFLTAGAATPLLMAGISLGAAAAGTGLSTATAEAVVNSKQIRKAEKALQIADQLRRKVKEQVNEWKQN 156
BLAST of apolipoprotein l3- partial vs. nr
Match: gi|1062974145|ref|XP_017903765.1| (PREDICTED: apolipoprotein L3 [Capra hircus]) HSP 1 Score: 76.2554 bits (186), Expect = 5.683e-12 Identity = 70/247 (28.34%), Postives = 122/247 (49.39%), Query Frame = 0 Query: 56 EFREWVQFREETIRQLREIADYVEKVFRRAGRTKIASSGGSVLAGGVTVVGGILTLASGGLALPILVAGAGLGLASGLTGGAAAVSEKVIKSKSMKKAEKALQLDAERTEELESSLKEYRKRIVAQQIIQELVSGGAWGTFNGYQVVSVLGAGIGFTQSSGKVIMAVSGETLGSEFTKLAAVNSGRLLAGTITIVVG-----GALMAYDIYQLAQGIQGFAQMGPEGAA-DIRQIANELEAQMEILT 296 EF + Q +E I++LRE+AD V+KV R + +S +++G ++++G +L + GL+L + AG GLG A+ +T + + E + S + +A +L + +L +K++ K I Q+I+E F VV +G+ + V+G+ + S FT G LAG+ + +G G LMA D+Y L + + + +A ++RQ A ELE ++E LT Sbjct: 91 EFPQVKQELKENIKKLRELADKVDKVHRDCTIANVVASSTGIVSGALSILGVVLAPCTAGLSLGLSAAGLGLGTAASVTSFSTMLVESINTSSAENQAS-SLNTAKTKYAKLPKKIKDFGKDI---QVIRE-------ARFKSELVV------------TGQTYI-VTGQ-VKSHFT-------GPALAGSRAVRIGSGVLSGLLMALDVYNLVKNARDLQEGAKTASAENMRQKARELEKKLEKLT 305
BLAST of apolipoprotein l3- partial vs. nr
Match: gi|999969041|gb|KXJ08215.1| (hypothetical protein AC249_AIPGENE27567 [Exaiptasia pallida]) HSP 1 Score: 76.6406 bits (187), Expect = 5.755e-12 Identity = 69/282 (24.47%), Postives = 128/282 (45.39%), Query Frame = 0 Query: 51 QSLEVEFREWVQFREETIRQLREIADYVEKVFRRAGRTKIASSGGSVLAGGVTVVGGILTLASGGLALPILVAGAGLGLASGLTGGAAAVSEKVIKSKSMKKAEKALQLDA----------ERTEELESSLKEY------RKRIVAQQIIQELVSGGAWGTFNGYQ-----------VVSVLGAGIGFTQSSGKVIMAVSGETLGSEFTKLAAV-------NSGRLLAGTI----TIVVGGALMAYDIYQLAQGIQGFAQMGPEGAAD-IRQIANELEAQME 293 Q E + ++ R+ T+ LR+IAD ++ + ++A S +V+ G + GGIL++ + GLA P++ AG + G+T G A +++ VI MKKA++ L D ++T++L + + ++I+ + I+ V G Y+ VV+ L ++ + K+++ + + + S +L V +GR +A ++ T + ++A+DIY+L AA IR IA ELE Q+E Sbjct: 54 QRFXKEVEQAIEKRKSTLAILRDIADELDSTTKSVDIARVAGSSVAVVGGATAIAGGILSIFTLGLASPLIGAGVMAAVTGGVTAGGAEIAKAVISKDKMKKAQEVLDEDKKAMTKADEEYDKTKDLAEKISKCCPQLGSPEQIICRLIVXNKVKISLQGDNPXYRLAGSSVARLALVVTSLTLAKIASKDASKLVVEIGPKLMPSLLPRLTIVVTKGAVGTAGRSVAKSVLRGATAIAMPVMLAFDIYELVNASMSINNGSKSDAAQTIRDIAGELERQLE 335
BLAST of apolipoprotein l3- partial vs. nr
Match: gi|1131278160|ref|XP_019816869.1| (PREDICTED: apolipoprotein L3-like [Bos indicus] >gi|1131278166|ref|XP_019816870.1| PREDICTED: apolipoprotein L3-like [Bos indicus] >gi|1131278170|ref|XP_019816871.1| PREDICTED: apolipoprotein L3-like [Bos indicus] >gi|1131278175|ref|XP_019816872.1| PREDICTED: apolipoprotein L3-like [Bos indicus]) HSP 1 Score: 75.8702 bits (185), Expect = 8.327e-12 Identity = 75/249 (30.12%), Postives = 119/249 (47.79%), Query Frame = 0 Query: 56 EFREWVQFREETIRQLREIADYVEKVFRRAGRTKIASSGGSVLAGGVTVVGGILTLASGGLALPILVAGAGLGLASGLTGGAAAVSEKVIKSKSMKKAE-KALQLDAERTEELESSL---KEYRKRIVAQQIIQELVSGGAWGTFNGYQVVSVLGAGIGFTQSSGKVIMAVSGETLGSEF--TKLAAVNSGRLLAGTITIVVGGALMAYDIYQLAQGIQGFAQMGPEGAAD-IRQIANELEAQMEILTT 297 EF + Q +E I++L E+AD V+KV R + + +S + +G ++++G +L + GL+L + G GLG AS +TG + V EKV ++ AE +A LD + E L KE+ K I A ++ + GY L A ++G+V + S + S F T L+ R+ G +V G M D+Y L + Q Q +A+ +RQ A ELE ++E LT Sbjct: 91 EFPQVKQELKENIKKLHELADNVDKVHRDCTISNVVASSTGIASGALSILGVVLAPFTAGLSLGLSATGIGLGAASAVTGISTMVVEKV----NLSSAESQASLLDRAKITSYERHLIKVKEFGKHIRAIRVAR------------GY---PRLVATAQHYITTGRVSVQ-SARQVRSHFQGTALSVTRGARIWRG----IVSGLFMGLDVYCLVKDAQELQQGAKTASAEKMRQKAQELETKLEKLTC 315 The following BLAST results are available for this feature:
BLAST of apolipoprotein l3- partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 0
BLAST of apolipoprotein l3- partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 1
BLAST of apolipoprotein l3- partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1315_size48675:26873..29690+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1315_size48675-snap-gene-0.11 ID=maker-scaffold1315_size48675-snap-gene-0.11|Name=apolipoprotein l3- partial|organism=Tigriopus kingsejongensis|type=gene|length=2818bp|location=Sequence derived from alignment at scaffold1315_size48675:26873..29690+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'apolipoprotein l3- partial' has the following synonyms
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