hormone receptor, maker-scaffold1331_size47282-snap-gene-0.8 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of hormone receptor vs. L. salmonis genes
Match: EMLSAG00000012651 (supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24") HSP 1 Score: 72.7886 bits (177), Expect = 1.005e-13 Identity = 35/91 (38.46%), Postives = 46/91 (50.55%), Query Frame = 0 Query: 74 CKVCGDKS-SGVHYGVITCEGCKGFFRRSQSSVINYQCPRQKNCTVDRVNRNRCQYCRLQKCLNLGM------------SRDAVKFGRMSK 151 C VCGDK+ +HYG I C C+ FFRRS Y C + C + R CQ+CR +KCL GM SR+ +K+ R +K Sbjct: 91 CNVCGDKAPDHIHYGGIACFSCRAFFRRSVPKHTTYFCSTDQACMITITTRKNCQFCRYKKCLESGMKPSWVLSEEEKSSRNLIKYVRKNK 181
BLAST of hormone receptor vs. L. salmonis genes
Match: EMLSAG00000011907 (supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22") HSP 1 Score: 60.077 bits (144), Expect = 1.066e-9 Identity = 31/91 (34.07%), Postives = 50/91 (54.95%), Query Frame = 0 Query: 55 TPTNARPSVPLSAQIEIIP--CKVCGDKS-SGVHYGVITCEGCKGFFRRSQSSVINYQ---CPRQKNCTVDRVNRNRCQYCRLQKCLNLGM 139 + T + PS + + E +P C++CG+ + V+YG C C+ FFRRS + Q C + ++C ++ R CQ CR QKC++ GM Sbjct: 85 SATLSEPSSQIIIRREALPRLCQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGM 175
BLAST of hormone receptor vs. L. salmonis genes
Match: EMLSAG00000010267 (supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19") HSP 1 Score: 58.5362 bits (140), Expect = 3.147e-9 Identity = 28/70 (40.00%), Postives = 41/70 (58.57%), Query Frame = 0 Query: 74 CKVCGDKS-SGVHYGVITCEGCKGFFRRS--QSSVINYQCPRQ-KNCTVDRVNRNRCQYCRLQKCLNLGM 139 C++CG+ + V+YG C C+ FFRRS +S + C Q K+C ++ R CQ CR QKC++ GM Sbjct: 107 CQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFICCSQTKDCIINLKTRKACQLCRFQKCVSAGM 176
BLAST of hormone receptor vs. L. salmonis genes
Match: EMLSAG00000002554 (supercontig:LSalAtl2s:LSalAtl2s15088:7:726:-1 gene:EMLSAG00000002554 transcript:EMLSAT00000002554 description:"maker-LSalAtl2s15088-snap-gene-0.3") HSP 1 Score: 51.6026 bits (122), Expect = 1.042e-7 Identity = 35/122 (28.69%), Postives = 61/122 (50.00%), Query Frame = 0 Query: 591 LANRIFDFAQDLAAMQLSEEALALYSAYILLQDDRPGLRNSDEVSKLNNAVLNTLQREITHRPPLVAVKGDV-SIINKLMTKRHTLREISYMHLDA-LNKFRSNG---GGQLDFPALHRELF 707 L + +F+ AQ L LS+ + ++ A +++ DRPGLRN + V K+ N + N L L+ D I ++L++ H LR ++ +H + L + + NG GG + L + L Sbjct: 9 LMDSVFELAQRLNQFNLSDAEIGIFCAVVIITPDRPGLRNPELVLKMQNKLKNVLNN------ILIPQHSDSPGIFSELLSMVHDLRTLNTLHTEKFLQQCKINGSDMGGSSEGSTLQKHLL 124
BLAST of hormone receptor vs. L. salmonis genes
Match: EMLSAG00000004174 (supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5") HSP 1 Score: 53.1434 bits (126), Expect = 1.738e-7 Identity = 25/74 (33.78%), Postives = 39/74 (52.70%), Query Frame = 0 Query: 74 CKVCGDKSSG-VHYGVITCEGCKGFFRRS--QSSVINYQCPR-----QKNCTVDRVNRNRCQYCRLQKCLNLGM 139 C++CGD + HYG I C C+ FF R+ + + ++C R C + + R CQ+CR + CL+ GM Sbjct: 137 CRICGDIAPPHNHYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGM 210
BLAST of hormone receptor vs. SwissProt
Match: gi|399369|sp|P31396.1|HR3_DROME (RecName: Full=Probable nuclear hormone receptor HR3; Short=dHR3; AltName: Full=Nuclear receptor subfamily 1 group F member 4) HSP 1 Score: 221.861 bits (564), Expect = 2.915e-63 Identity = 114/205 (55.61%), Postives = 131/205 (63.90%), Query Frame = 0 Query: 65 LSAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVINYQCPRQKNCTVDRVNRNRCQYCRLQKCLNLGMSRDAVKFGRMSKKQREKVEDEVRYHKEINSQQLQQQQQQQQQASAGLISRSHTNSGSSPDTTGSVFDQPQPSSTDHL-----ISYNPDYTNPASTYSTFQSLSACSAPAVSAASGTAPGTPVSAGHTPTS 264 + AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSV+NYQCPR K C VDRVNRNRCQYCRLQKCL LGMSRDAVKFGRMSKKQREKVEDEVR+H+ ++ S ++PD+ SV+D PSS+D L SY+ Y+N Y + SA P + + S + P S Sbjct: 42 IKAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKQCVVDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKKQREKVEDEVRFHR----------------------AQMRAQSDAAPDS--SVYDTQTPSSSDQLHHNNYNSYSGGYSNNEVGYGSPYGYSASVTPQQTMQYDISADYVDSTTYEPRS 222 HSP 2 Score: 216.083 bits (549), Expect = 3.525e-61 Identity = 112/259 (43.24%), Postives = 173/259 (66.80%), Query Frame = 0 Query: 457 DPERIS-------ALLTSSIFEAHTRTSLLSEDIIQERWKNGVDQSKVFAFKSMSQDELWLQCAQGLTSIITQIIEFAKMVPGFMKFPQDDQIVLLKGGVFELAIIRMSRYYDTSQSAVLFSDMMLPMDAFTVNRDTTEMRLANRIFDFAQDLAAMQLSEEALALYSAYILLQDDRPGLRNSDEVSKLNNAVLNTLQREI-THRPPLVAVKGDVSIINKLMTKRHTLREISYMHLDALNKFRSNGGGQLDFPALHRELF 707 DPE IS +L ++ EAH T+ E + + ++ D S++ +K++ Q+ELWL CA+ LT +I IIEFAK++PGFM+ QDDQI+LLK G FELAI+RMSR D SQ+AVL+ D+MLP +AF + D+ EMRL +RIF A+ +A ++L+E LALY + +LL +R G+R + E+ +L N +N +++E+ T+ PL KGDV++++ L+ R+IS +H+++L+KF+ + FPAL++ELF Sbjct: 226 DPEFISHADGDINDVLIKTLAEAHANTNTKLE-AVHDMFRKQPDVSRILYYKNLGQEELWLDCAEKLTQMIQNIIEFAKLIPGFMRLSQDDQILLLKTGSFELAIVRMSRLLDLSQNAVLYGDVMLPQEAFYTS-DSEEMRLVSRIFQTAKSIAELKLTETELALYQSLVLLWPERNGVRGNTEIQRLFNLSMNAIRQELETNHAPL---KGDVTVLDTLLNNIPNFRDISILHMESLSKFKLQHPNVV-FPALYKELF 478
BLAST of hormone receptor vs. SwissProt
Match: gi|585482|sp|Q08882.1|HR3_MANSE (RecName: Full=Probable nuclear hormone receptor HR3; Short=mHR3; AltName: Full=Nuclear receptor subfamily 1 group F member 4) HSP 1 Score: 218.394 bits (555), Expect = 1.882e-61 Identity = 112/171 (65.50%), Postives = 124/171 (72.51%), Query Frame = 0 Query: 65 LSAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVINYQCPRQKNCTVDRVNRNRCQYCRLQKCLNLGMSRDAVKFGRMSKKQREKVEDEVRYHKEINSQQLQQQQQQQQQASAGLISRSHTNSGSSPDTTGSVFD--QPQPSSTDHLIS-YN--PDYTNPASTY 230 + AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQS+V+NYQCPR K C VDRVNRNRCQYCRLQKCL LGMSRDAVKFGRMSKKQREKVEDEVRYHK Q++ Q + ++PD SV+D Q PSS+D YN P Y +P S+Y Sbjct: 95 IRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKKQREKVEDEVRYHKA----QMRAQ------------------NDAAPD---SVYDAQQQTPSSSDQFHGHYNGYPGYASPLSSY 240 HSP 2 Score: 198.364 bits (503), Expect = 3.384e-54 Identity = 105/249 (42.17%), Postives = 158/249 (63.45%), Query Frame = 0 Query: 461 ISALLTSSIFEAHTRTSLLSEDIIQERWKNGVDQSKVFAFKSMSQDELWLQCAQGLTSIITQIIEFAKMVPGFMKFPQDDQIVLLKGGVFELAIIRMSRYYDTSQSAVLFSDMMLPMDAFTVNRDTTEMRLANRIFDFAQDLAAMQLSEEALALYSAYILLQDDRPGLRNSDEVSKLNNAVLNTLQREI--THRPPLVAVKGDVSIINKLMTKRHTLREISYMHLDALNKFRSNGGGQLDFPALHRELF 707 IS +L S+ E H T+ E I E + D SK+ + SM+ +E+WL CA LT++I IIEFAK++PGFMK QDDQI+LLK G FELAI+R+SR D ++ VL+ D++LP+ RD +M L + IF+ A+ +A ++L+E LALY + +LL +R G+ + E+ L N ++ ++ EI H P +KGDV++++ L+ K T RE+S MHL AL++F+ + FPAL++ELF Sbjct: 295 ISKVLVKSLAERHANTNPKLE-YINEMFSKPQDVSKLLFYNSMTYEEMWLDCADKLTAMIQNIIEFAKLIPGFMKLTQDDQILLLKSGSFELAIVRLSRLIDVNREQVLYGDVVLPIRECVHARDPRDMALVSGIFEAAKSIARLKLTESELALYQSLVLLWPERHGVMGNTEIRCLFNMSMSAMRHEIEANHAP----LKGDVTVLDTLLAKIPTFRELSLMHLGALSRFKMTHPHHV-FPALYKELF 537
BLAST of hormone receptor vs. SwissProt
Match: gi|24418858|sp|P41828.2|NHR23_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-23; AltName: Full=Steroid hormone receptor family member chr-3) HSP 1 Score: 219.164 bits (557), Expect = 2.234e-61 Identity = 124/235 (52.77%), Postives = 142/235 (60.43%), Query Frame = 0 Query: 62 SVPLSAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVINYQCPRQKNCTVDRVNRNRCQYCRLQKCLNLGMSRDAVKFGRMSKKQREKVEDEVRYHKEINSQQLQQQQQQQQQASAGLISRSHTNSGSSPDTTGSVFDQPQPSSTDHLISYNPDYTNPASTYSTFQSLSACSAPAVSAASGTAPGTPVSA---GHTPTSVSGNGSSAEWADYGNVDSTTSSFETPASR 293 S+ +SAQIE+IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSS++NYQCPRQKNC VDRVNRNRCQYCRL+KC+ LGMSRDAVKFGRMSKKQREKVEDEVR HKE+ + L QA G S P PS +P Y S Y + S ++ S A P TP+ G TP+S +G A A G+ S E A+R Sbjct: 151 SLLVSAQIEVIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSIVNYQCPRQKNCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGRMSKKQREKVEDEVRMHKELAANGL------GYQAIYGDYS-------------------PPPS--------HPSYCFDQSMYGHYPSGTSTPVNGYSIAVAATPTTPMPQNMYGATPSSTNGTQYVAHQATGGSFPSPQVPEEDVATR 352 HSP 2 Score: 81.2629 bits (199), Expect = 1.019e-14 Identity = 60/202 (29.70%), Postives = 104/202 (51.49%), Query Frame = 0 Query: 509 WLQCAQGLTSIITQIIEFAKMVPGFMKFPQDDQIVLLKGGVFELAIIRMSRYYDTSQSAVLFSDMMLPMDAFTVNRDTTEMRLANRIFDFAQDLAAMQLSEEALALYSAYILLQDDRPGLRNSDEVSKLNNAVLNTLQ--REITHRPPLVAVKGDVSIINKLMTKRHTLREISYMHLDALNKFR-SNGGGQLDFPALHRELF 707 W A+ L +I IIEFAK + GFM PQ+ QI LLKG VFEL+++ + YY+ AV +P A + D EM+L + + Q++ +Q + LAL +A ++L+ + +S + L+ A + T + + ++ + + I+++ +R+ + +H +AL FR S+ PAL++ELF Sbjct: 387 WELFARELNPLIQAIIEFAKSIDGFMNLPQETQIQLLKGSVFELSLVFAAMYYNVDAQAVCGERYSVPF-ACLIAEDDAEMQLIVEVNNTLQEIVHLQPHQSELALLAAGLILEQ----VSSSHGIGILDTATIATAETLKNALYQSVMPRIGCMEDTIHRIQDVETRIRQTARLHQEALQNFRMSDPTSSEKLPALYKELF 583
BLAST of hormone receptor vs. SwissProt
Match: gi|1708295|sp|P49868.1|HR3_GALME (RecName: Full=Probable nuclear hormone receptor HR3; Short=gHR3; AltName: Full=Nuclear receptor subfamily 1 group F member 4) HSP 1 Score: 218.394 bits (555), Expect = 2.491e-61 Identity = 118/203 (58.13%), Postives = 137/203 (67.49%), Query Frame = 0 Query: 34 VDQNGNPPERQSPVCFASSVC-TPTNARPSVPLSAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVINYQCPRQKNCTVDRVNRNRCQYCRLQKCLNLGMSRDAVKFGRMSKKQREKVEDEVRYHKEINSQQLQQQQQQQQQASAGLISRSHTNSGSSPDTTGSVFD--QPQPSSTDHLIS-YN--PDYTNPASTY 230 V + +PP S F SS+ + + + + AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQS+V+NYQCPR K C VDRVNRNRCQYCRLQKCL LGMSRDAVKFGRMSKKQREKVEDEVRYH+ Q++ Q + ++PD SV+D Q PSS+D YN P Y +P S+Y Sbjct: 67 VADSTSPPPGSSEGMFGSSISGMFMDKKAANSIRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKKQREKVEDEVRYHRA----QMRAQ------------------TDAAPD---SVYDAQQQTPSSSDQFHGHYNGYPGYRSPLSSY 244 HSP 2 Score: 199.904 bits (507), Expect = 1.118e-54 Identity = 105/249 (42.17%), Postives = 158/249 (63.45%), Query Frame = 0 Query: 461 ISALLTSSIFEAHTRTSLLSEDIIQERWKNGVDQSKVFAFKSMSQDELWLQCAQGLTSIITQIIEFAKMVPGFMKFPQDDQIVLLKGGVFELAIIRMSRYYDTSQSAVLFSDMMLPMDAFTVNRDTTEMRLANRIFDFAQDLAAMQLSEEALALYSAYILLQDDRPGLRNSDEVSKLNNAVLNTLQREI--THRPPLVAVKGDVSIINKLMTKRHTLREISYMHLDALNKFRSNGGGQLDFPALHRELF 707 IS +L S+ EAH T+ E + E ++ D SK+ + SM+ +E+WL CA LT +I IIEFAK++PGFMK QDDQI+LLK G FELAI+R+SR D ++ VL+ D++LP+ RD ++ L IFD A+ + ++L+E LALY + +LL +R G+R + E+ L N + ++ EI H P +KGDV++++ L+ K T RE+S MHL+AL +F++ + FPAL++ELF Sbjct: 304 ISKVLVKSLAEAHANTNPKLE-YVHEMFRKPPDVSKLLFYNSMTYEEMWLDCADKLTGMIQNIIEFAKLIPGFMKLSQDDQILLLKSGSFELAIVRLSRLIDVNREQVLYGDVVLPIRECVHARDPRDVTLVVGIFDAAKTIERLKLTETELALYQSLVLLWPERHGVRGNPEIQCLFNMSMAAMRHEIESNHAP----LKGDVTVLDTLLAKIPTFRELSLMHLEALCRFKAAHPHHV-FPALYKELF 546
BLAST of hormone receptor vs. SwissProt
Match: gi|124028630|sp|Q92753.3|RORB_HUMAN (RecName: Full=Nuclear receptor ROR-beta; AltName: Full=Nuclear receptor RZR-beta; AltName: Full=Nuclear receptor subfamily 1 group F member 2; AltName: Full=Retinoid-related orphan receptor-beta) HSP 1 Score: 179.104 bits (453), Expect = 6.071e-48 Identity = 76/99 (76.77%), Postives = 88/99 (88.89%), Query Frame = 0 Query: 66 SAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVINYQCPRQKNCTVDRVNRNRCQYCRLQKCLNLGMSRDAVKFGRMSKKQREKVEDEVRYH 164 +AQIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + +Y CPRQ+NC +DR NRNRCQ+CRLQKCL LGMSRDAVKFGRMSKKQR+ + EV+ H Sbjct: 13 TAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKH 111 HSP 2 Score: 128.257 bits (321), Expect = 2.805e-30 Identity = 78/246 (31.71%), Postives = 131/246 (53.25%), Query Frame = 0 Query: 465 LTSSIFEAHTRTSLLS-EDIIQERWKNGVDQSKVFAFKSMSQDELWLQCAQGLTSIITQIIEFAKMVPGFMKFPQDDQIVLLKGGVFELAIIRMSRYYDTSQSAVLFSDMMLPMDAFTVNRDTTEMRLANRIFDFAQDLAAMQLSEEALALYSAYILLQDDRPGLRNSDEVSKLNNAVLNTLQREITHRPPLVAVKGDVSIINKLMTKRHTLREISYMHLDALNKFRSNGGGQLD--FPALHRELF 707 + +I ++H T + E++ Q W+ + ++ A++S S++ LW QCA +T I ++EFAK + GFM+ Q+DQI+LLK G E+ ++RM R ++ + VLF M F + L N FDFA++L ++QL+EE +AL+S+ +L+ DR L +V KL + LQ I D + KL+ K T+ + +H + L F+ + ++ FP L++ELF Sbjct: 226 IAQNIIKSHLETCQYTMEELHQLAWQTHTYE-EIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMF---KALGSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKN------HLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPEIVNTLFPPLYKELF 461
BLAST of hormone receptor vs. SwissProt
Match: gi|124028632|sp|P45446.3|RORB_RAT (RecName: Full=Nuclear receptor ROR-beta; AltName: Full=Nuclear receptor RZR-beta; AltName: Full=Nuclear receptor subfamily 1 group F member 2; AltName: Full=Retinoid-related orphan receptor-beta) HSP 1 Score: 179.104 bits (453), Expect = 6.770e-48 Identity = 76/99 (76.77%), Postives = 88/99 (88.89%), Query Frame = 0 Query: 66 SAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVINYQCPRQKNCTVDRVNRNRCQYCRLQKCLNLGMSRDAVKFGRMSKKQREKVEDEVRYH 164 +AQIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + +Y CPRQ+NC +DR NRNRCQ+CRLQKCL LGMSRDAVKFGRMSKKQR+ + EV+ H Sbjct: 13 TAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKH 111 HSP 2 Score: 128.642 bits (322), Expect = 2.440e-30 Identity = 78/246 (31.71%), Postives = 131/246 (53.25%), Query Frame = 0 Query: 465 LTSSIFEAHTRTSLLS-EDIIQERWKNGVDQSKVFAFKSMSQDELWLQCAQGLTSIITQIIEFAKMVPGFMKFPQDDQIVLLKGGVFELAIIRMSRYYDTSQSAVLFSDMMLPMDAFTVNRDTTEMRLANRIFDFAQDLAAMQLSEEALALYSAYILLQDDRPGLRNSDEVSKLNNAVLNTLQREITHRPPLVAVKGDVSIINKLMTKRHTLREISYMHLDALNKFRSNGGGQLD--FPALHRELF 707 + +I ++H T + E++ Q W+ + ++ A++S S++ LW QCA +T I ++EFAK + GFM+ Q+DQI+LLK G E+ ++RM R ++ + VLF M F + L N FDFA++L ++QL+EE +AL+S+ +L+ DR L +V KL + LQ I D + KL+ K T+ + +H + L F+ + ++ FP L++ELF Sbjct: 226 IAQNIIKSHLETCQYTMEELHQLAWQTHTYE-EIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMF---KALGSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLLEPRKVQKLQEKIYFALQHVIQKN------HLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELF 461
BLAST of hormone receptor vs. SwissProt
Match: gi|124028631|sp|Q8R1B8.3|RORB_MOUSE (RecName: Full=Nuclear receptor ROR-beta; AltName: Full=Nuclear receptor RZR-beta; AltName: Full=Nuclear receptor subfamily 1 group F member 2; AltName: Full=Retinoid-related orphan receptor-beta) HSP 1 Score: 179.104 bits (453), Expect = 7.114e-48 Identity = 76/99 (76.77%), Postives = 88/99 (88.89%), Query Frame = 0 Query: 66 SAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVINYQCPRQKNCTVDRVNRNRCQYCRLQKCLNLGMSRDAVKFGRMSKKQREKVEDEVRYH 164 +AQIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + +Y CPRQ+NC +DR NRNRCQ+CRLQKCL LGMSRDAVKFGRMSKKQR+ + EV+ H Sbjct: 13 TAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKH 111 HSP 2 Score: 128.642 bits (322), Expect = 1.899e-30 Identity = 78/246 (31.71%), Postives = 131/246 (53.25%), Query Frame = 0 Query: 465 LTSSIFEAHTRTSLLS-EDIIQERWKNGVDQSKVFAFKSMSQDELWLQCAQGLTSIITQIIEFAKMVPGFMKFPQDDQIVLLKGGVFELAIIRMSRYYDTSQSAVLFSDMMLPMDAFTVNRDTTEMRLANRIFDFAQDLAAMQLSEEALALYSAYILLQDDRPGLRNSDEVSKLNNAVLNTLQREITHRPPLVAVKGDVSIINKLMTKRHTLREISYMHLDALNKFRSNGGGQLD--FPALHRELF 707 + +I ++H T + E++ Q W+ + ++ A++S S++ LW QCA +T I ++EFAK + GFM+ Q+DQI+LLK G E+ ++RM R ++ + VLF M F + L N FDFA++L ++QL+EE +AL+S+ +L+ DR L +V KL + LQ I D + KL+ K T+ + +H + L F+ + ++ FP L++ELF Sbjct: 226 IAQNIIKSHLETCQYTMEELHQLAWQTHTYE-EIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMF---KALGSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKN------HLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELF 461
BLAST of hormone receptor vs. SwissProt
Match: gi|1710637|sp|P51448.1|RORA_MOUSE (RecName: Full=Nuclear receptor ROR-alpha; AltName: Full=Nuclear receptor RZR-alpha; AltName: Full=Nuclear receptor subfamily 1 group F member 1; AltName: Full=RAR-related orphan receptor A; AltName: Full=Retinoid-related orphan receptor-alpha) HSP 1 Score: 178.333 bits (451), Expect = 3.413e-47 Identity = 76/100 (76.00%), Postives = 88/100 (88.00%), Query Frame = 0 Query: 66 SAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVINYQCPRQKNCTVDRVNRNRCQYCRLQKCLNLGMSRDAVKFGRMSKKQREKVEDEVRYHK 165 ++QIEIIPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ S Y CPRQKNC +DR +RNRCQ+CRLQKCL +GMSRDAVKFGRMSKKQR+ + EV+ H+ Sbjct: 65 TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHR 164 HSP 2 Score: 129.413 bits (324), Expect = 2.419e-30 Identity = 79/253 (31.23%), Postives = 132/253 (52.17%), Query Frame = 0 Query: 465 LTSSIFEAHTRTS-LLSEDIIQERWKNGVDQSKVFAFKSMSQDELWLQCAQGLTSIITQIIEFAKMVPGFMKFPQDDQIVLLKGGVFELAIIRMSRYYDTSQSAVLFSDMMLPMDAFTVNRDTTEMRLANRIFDFAQDLAAMQLSEEALALYSAYILLQDDRPGLRNSDEVSKLNNAVLNTLQREI--THRPPLVAVKGDVSIINKLMTKRHTLREISYMHLDALNKFRSNGGG--QLDFPALHRELFPSGTE 712 L +I ++H T L E++ Q W+ + Q ++ +++ ++ +W CA +T I ++EFAK + GFM+ Q+DQIVLLK G E+ IRM R +D+ + V F D F + + +F+F + L +M L+E+ +AL+SA++L+ DR L+ ++ KL + LQ + HR + I+ KL+ K TLR + H + L F++ +L FP L++ELF S E Sbjct: 276 LAQNISKSHLETCQYLREELQQITWQTFL-QEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVF---KSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHR--------EDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFE 516
BLAST of hormone receptor vs. SwissProt
Match: gi|613504304|sp|P35398.2|RORA_HUMAN (RecName: Full=Nuclear receptor ROR-alpha; AltName: Full=Nuclear receptor RZR-alpha; AltName: Full=Nuclear receptor subfamily 1 group F member 1; AltName: Full=RAR-related orphan receptor A; AltName: Full=Retinoid-related orphan receptor-alpha) HSP 1 Score: 177.948 bits (450), Expect = 4.320e-47 Identity = 76/100 (76.00%), Postives = 88/100 (88.00%), Query Frame = 0 Query: 66 SAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVINYQCPRQKNCTVDRVNRNRCQYCRLQKCLNLGMSRDAVKFGRMSKKQREKVEDEVRYHK 165 ++QIEIIPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ S Y CPRQKNC +DR +RNRCQ+CRLQKCL +GMSRDAVKFGRMSKKQR+ + EV+ H+ Sbjct: 65 TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHR 164 HSP 2 Score: 129.028 bits (323), Expect = 2.676e-30 Identity = 79/253 (31.23%), Postives = 132/253 (52.17%), Query Frame = 0 Query: 465 LTSSIFEAHTRTS-LLSEDIIQERWKNGVDQSKVFAFKSMSQDELWLQCAQGLTSIITQIIEFAKMVPGFMKFPQDDQIVLLKGGVFELAIIRMSRYYDTSQSAVLFSDMMLPMDAFTVNRDTTEMRLANRIFDFAQDLAAMQLSEEALALYSAYILLQDDRPGLRNSDEVSKLNNAVLNTLQREI--THRPPLVAVKGDVSIINKLMTKRHTLREISYMHLDALNKFRSNGGG--QLDFPALHRELFPSGTE 712 L +I ++H T L E++ Q W+ + Q ++ +++ ++ +W CA +T I ++EFAK + GFM+ Q+DQIVLLK G E+ IRM R +D+ + V F D F + + +F+F + L +M L+E+ +AL+SA++L+ DR L+ ++ KL + LQ + HR + I+ KL+ K TLR + H + L F++ +L FP L++ELF S E Sbjct: 276 LAQNISKSHLETCQYLREELQQITWQTFL-QEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVF---KSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHR--------EDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFE 516
BLAST of hormone receptor vs. SwissProt
Match: gi|1710639|sp|P51450.1|RORG_MOUSE (RecName: Full=Nuclear receptor ROR-gamma; AltName: Full=Nuclear receptor RZR-gamma; AltName: Full=Nuclear receptor subfamily 1 group F member 3; AltName: Full=RAR-related orphan receptor C; AltName: Full=Retinoid-related orphan receptor-gamma; AltName: Full=Thymus orphan receptor; Short=TOR) HSP 1 Score: 169.088 bits (427), Expect = 4.994e-44 Identity = 72/96 (75.00%), Postives = 84/96 (87.50%), Query Frame = 0 Query: 66 SAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVINYQCPRQKNCTVDRVNRNRCQYCRLQKCLNLGMSRDAVKFGRMSKKQREKVEDEV 161 ++QIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + Y C RQ+NC +DR +RNRCQ+CRLQKCL LGMSRDAVKFGRMSKKQR+ + EV Sbjct: 23 TSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQCNVAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEV 118 HSP 2 Score: 121.324 bits (303), Expect = 9.786e-28 Identity = 74/237 (31.22%), Postives = 122/237 (51.48%), Query Frame = 0 Query: 481 EDIIQERWKNGVDQSKVFAFKSMSQDELWLQCAQGLTSIITQIIEFAKMVPGFMKFPQDDQIVLLKGGVFELAIIRMSRYYDTSQSAVLFSDMMLPMDAFTVNRDTTEMRLANRIFDFAQDLAAMQLSEEALALYSAYILLQDDRPGLRNSDEVSKLNNAVLNTLQREI--THRPPLVAVKGDVSIINKLMTKRHTLREISYMHLDALNKFRSNGG--GQLDFPALHRELFPSGTEA 713 ED++++R N + +V +++ S E+W +CA LT I ++EFAK + GFM+ Q+DQI+LL G E+ ++RM R Y+ + V F ++ F R L + IFDF+ L+A+ SE+ +ALY+A +L+ +RPGL+ V L + + THR L+A + + LR + H++ L F+ Q FP L++ELF + E+ Sbjct: 288 EDLLRQR-TNLFSREEVTSYQRKSMWEMWERCAHHLTEAIQYVVEFAKRLSGFMELCQNDQIILLTAGAMEVVLVRMCRAYNANNHTVFFEGKYGGVELF---RALGCSELISSIFDFSHFLSALCFSEDEIALYTALVLINANRPGLQEKRRVEHLQYNLELAFHHHLCKTHRQGLLAK----------LPPKGKLRSLCSQHVEKLQIFQHLHPIVVQAAFPPLYKELFSTDVES 510
BLAST of hormone receptor vs. nr
Match: gi|1000733371|ref|XP_015589116.1| (PREDICTED: probable nuclear hormone receptor HR3 isoform X6 [Cephus cinctus] >gi|1000733373|ref|XP_015589118.1| PREDICTED: probable nuclear hormone receptor HR3 isoform X6 [Cephus cinctus] >gi|1000733375|ref|XP_015589119.1| PREDICTED: probable nuclear hormone receptor HR3 isoform X6 [Cephus cinctus]) HSP 1 Score: 268.085 bits (684), Expect = 2.472e-79 Identity = 130/252 (51.59%), Postives = 180/252 (71.43%), Query Frame = 0 Query: 456 NDPERISALLTSSIFEAHTRTSLLSEDIIQERWKNGVDQSKVFAFKSMSQDELWLQCAQGLTSIITQIIEFAKMVPGFMKFPQDDQIVLLKGGVFELAIIRMSRYYDTSQSAVLFSDMMLPMDAFTVNRDTTEMRLANRIFDFAQDLAAMQLSEEALALYSAYILLQDDRPGLRNSDEVSKLNNAVLNTLQREITHRPPLVAVKGDVSIINKLMTKRHTLREISYMHLDALNKFRSNGGGQLDFPALHRELF 707 DP +IS LL+ +I +AH RT LLS D IQE ++ D S++ +K+M+ ++LWL+CAQ LT++I QIIEFAKMVPGFMK QDDQIVLLK G FELA++RMSRY D Q+ VL+ D MLP DAF DT EM+L + +F+ A+ +A ++L+E LALYSA +LL DRPGL+ E+++L+ AV+ L+ E+ R + +KGDV++ + ++ K LREIS +H+DAL KF+ L+FPALH+ELF Sbjct: 133 TDPAQISELLSKTIADAHARTCLLSTDQIQESFRKPHDLSRLIYYKNMAHEQLWLECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYLDLQQNCVLYGDTMLPQDAFYTT-DTAEMKLVSCVFELARSVAELKLTETELALYSAAVLLSPDRPGLKGLAEITRLSQAVIRALRSEL-DRNHVSPIKGDVTVCDAMLAKIPQLREISLLHMDALAKFK-RSQPHLEFPALHKELF 381 HSP 2 Score: 68.9366 bits (167), Expect = 1.053e-8 Identity = 58/170 (34.12%), Postives = 81/170 (47.65%), Query Frame = 0 Query: 139 MSRDAVKFGRMSKKQREKVEDEVRYHKEINSQQLQQQQQQQQQASAGLISRSHTNSGSSPDTTGSVFDQPQPSSTDHLISYNPDYTNPASTYSTFQSLSACSAPAVSAASGTAPGTPVSAGHTPTSVSGNGSSAEWADYGNVDSTTSSFETPASRGANEIS--SPGAVAT 306 MSRDAVKFGRMSKKQREKVEDEVR+H+ Q +A+ S ++PD+ SV++ PSS+D SYN YT S Y++ PGT S + +++ SA++ VDSTT+ P + ++ +P AT Sbjct: 1 MSRDAVKFGRMSKKQREKVEDEVRFHRA------------QMRAA----------SETAPDS--SVYEHQTPSSSDQHHSYNGGYTYGGSEYAS-----------------PGPGTGSSGYYNHQAITNYELSADY-----VDSTTAYDPRPTQTQVDTVAPDTPSVTAT 124
BLAST of hormone receptor vs. nr
Match: gi|642929406|ref|XP_008195824.1| (PREDICTED: probable nuclear hormone receptor HR3 isoform X2 [Tribolium castaneum]) HSP 1 Score: 270.781 bits (691), Expect = 3.413e-79 Identity = 137/261 (52.49%), Postives = 184/261 (70.50%), Query Frame = 0 Query: 449 LLQEELQNDPERISALLTSSIFEAHTRTSLLSEDIIQERWKNGVDQSKVFAFKSMSQDELWLQCAQGLTSIITQIIEFAKMVPGFMKFPQDDQIVLLKGGVFELAIIRMSRYYDTSQSAVLFSDMMLPMDAFTVNRDTTEMRLANRIFDFAQDLAAMQLSEEALALYSAYILLQDDRPGLRNSDEVSKLNNAVLNTLQREI--THRPPLVAVKGDVSIINKLMTKRHTLREISYMHLDALNKFRSNGGGQLDFPALHRELF 707 L+ + DP +IS LL+ +I +AHTRT L S + I E ++ D S++ +K+M+ +ELWL+CAQ LT+II QIIEFAKMVPGFMK QDDQIVLLK G FELAIIRMSRY D SQ+ VL+ D MLP DAF + DT EM+L +F+ ++ +A ++L+E LALYSA +LL DRPGL+ E+S+L+ AV+ L+ E+ H P +KGDV++ + L+TK TLREIS +H+DAL K + L+FPALH+ELF Sbjct: 222 LMANVVTTDPSQISELLSKTISDAHTRTCLYSLEHIHEMFRKPHDLSRLLYYKNMAHEELWLECAQKLTTIIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAIIRMSRYLDLSQNCVLYGDTMLPQDAFFTS-DTAEMKLVTCVFEVSKSIAELKLTETELALYSACVLLSPDRPGLKGIGEISRLSQAVVRALRLELDRNHSMP---IKGDVTVCDALLTKIPTLREISMLHMDALGKLK-RSAPHLEFPALHKELF 477 HSP 2 Score: 228.024 bits (580), Expect = 4.339e-63 Identity = 114/161 (70.81%), Postives = 123/161 (76.40%), Query Frame = 0 Query: 65 LSAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVINYQCPRQKNCTVDRVNRNRCQYCRLQKCLNLGMSRDAVKFGRMSKKQREKVEDEVRYHKEINSQQLQQQQQQQQQASAGLISRSHTNSGSSPDTTGSVFDQPQPSSTDHL-ISYNPDYT 224 + AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSV+NYQCPR KNC VDRVNRNRCQYCRLQKCL LGMSRDAVKFGRMSKKQREKVEDEVR+H+ QL+ Q S S+PD+ SVF+Q PSS+D L SYN YT Sbjct: 32 IKAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKNCVVDRVNRNRCQYCRLQKCLRLGMSRDAVKFGRMSKKQREKVEDEVRFHRA----QLRAQ------------------SDSAPDS--SVFEQQTPSSSDQLHHSYNGGYT 168
BLAST of hormone receptor vs. nr
Match: gi|1339060783|ref|XP_023718984.1| (probable nuclear hormone receptor HR3 isoform X3 [Cryptotermes secundus]) HSP 1 Score: 271.937 bits (694), Expect = 5.572e-79 Identity = 132/252 (52.38%), Postives = 181/252 (71.83%), Query Frame = 0 Query: 456 NDPERISALLTSSIFEAHTRTSLLSEDIIQERWKNGVDQSKVFAFKSMSQDELWLQCAQGLTSIITQIIEFAKMVPGFMKFPQDDQIVLLKGGVFELAIIRMSRYYDTSQSAVLFSDMMLPMDAFTVNRDTTEMRLANRIFDFAQDLAAMQLSEEALALYSAYILLQDDRPGLRNSDEVSKLNNAVLNTLQREITHRPPLVAVKGDVSIINKLMTKRHTLREISYMHLDALNKFRSNGGGQLDFPALHRELF 707 DP +IS LL+ +I +AH RT L + + I E ++ D SK+ +K+M+ +ELWL+CAQ LT++I QIIEFAKMVPGFMK QDDQIVLLK G FELA++RMSRY+D SQ+ VL++D MLP DAF +T EM+L +F+FA+ +A ++L+E LALYSA +LL DRPGL+ E+ +L+ AVL L+ E+ R V +KGDV++ + L+ K TLRE+S +H+DAL KF+ L+FPALH+ELF Sbjct: 289 TDPAQISELLSKTIADAHARTCLFTTEHIHEMFRKPQDLSKLIYYKNMAHEELWLECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYFDLSQNCVLYADTMLPQDAF-FTTETAEMKLVTCVFEFAKGVAELKLTETELALYSACVLLSADRPGLKGLAEIGRLSQAVLRALRLEL-ERNHSVPIKGDVTVYDALLAKVPTLRELSMLHMDALAKFK-RSTPHLEFPALHKELF 537 HSP 2 Score: 230.72 bits (587), Expect = 1.732e-63 Identity = 133/249 (53.41%), Postives = 156/249 (62.65%), Query Frame = 0 Query: 56 PTNARPSVPLSAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVINYQCPRQKNCTVDRVNRNRCQYCRLQKCLNLGMSRDAVKFGRMSKKQREKVEDEVRYHKEINSQQLQQQQQQQQQASAGLISRSHTNSGSSPDTTGSVFDQPQPSSTDHLISYNPDYTNPASTYSTFQSLSACSAPAVSAASGTAPGTPVSAGHTPTSVSGNGSSAEWADYGNVDSTTSSFETPASRGANEISSPGAV 304 PT+ R + + AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSV+NYQCPR KNC VDRVNRNRCQYCRLQKCL LGMSRDAVKFGRMSKKQREKVEDEVR+H+ QL+ Q + ++PD+ SVFD PSS+D L P+Y N TY++ S + T TPV H + + ADY VDSTT+ P G + +S+ A+ Sbjct: 75 PTDKRSANSIRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKNCVVDRVNRNRCQYCRLQKCLRLGMSRDAVKFGRMSKKQREKVEDEVRFHR----AQLRAQTE------------------TAPDS--SVFDTQTPSSSDQL---QPNY-NGGYTYNS----DLGSYTPATHGGYTYATTPVQTQHQQMAYDIS------ADY--VDSTTTYDPRPGP-GLDTLSADSAI 282
BLAST of hormone receptor vs. nr
Match: gi|1000733369|ref|XP_015589115.1| (PREDICTED: probable nuclear hormone receptor HR3 isoform X5 [Cephus cinctus]) HSP 1 Score: 268.855 bits (686), Expect = 9.614e-79 Identity = 131/259 (50.58%), Postives = 183/259 (70.66%), Query Frame = 0 Query: 449 LLQEELQNDPERISALLTSSIFEAHTRTSLLSEDIIQERWKNGVDQSKVFAFKSMSQDELWLQCAQGLTSIITQIIEFAKMVPGFMKFPQDDQIVLLKGGVFELAIIRMSRYYDTSQSAVLFSDMMLPMDAFTVNRDTTEMRLANRIFDFAQDLAAMQLSEEALALYSAYILLQDDRPGLRNSDEVSKLNNAVLNTLQREITHRPPLVAVKGDVSIINKLMTKRHTLREISYMHLDALNKFRSNGGGQLDFPALHRELF 707 +L + DP +IS LL+ +I +AH RT LLS D IQE ++ D S++ +K+M+ ++LWL+CAQ LT++I QIIEFAKMVPGFMK QDDQIVLLK G FELA++RMSRY D Q+ VL+ D MLP DAF DT EM+L + +F+ A+ +A ++L+E LALYSA +LL DRPGL+ E+++L+ AV+ L+ E+ R + +KGDV++ + ++ K LREIS +H+DAL KF+ L+FPALH+ELF Sbjct: 204 VLPSVVTTDPAQISELLSKTIADAHARTCLLSTDQIQESFRKPHDLSRLIYYKNMAHEQLWLECAQKLTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYLDLQQNCVLYGDTMLPQDAFYTT-DTAEMKLVSCVFELARSVAELKLTETELALYSAAVLLSPDRPGLKGLAEITRLSQAVIRALRSEL-DRNHVSPIKGDVTVCDAMLAKIPQLREISLLHMDALAKFK-RSQPHLEFPALHKELF 459 HSP 2 Score: 227.254 bits (578), Expect = 4.149e-63 Identity = 126/244 (51.64%), Postives = 151/244 (61.89%), Query Frame = 0 Query: 65 LSAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVINYQCPRQKNCTVDRVNRNRCQYCRLQKCLNLGMSRDAVKFGRMSKKQREKVEDEVRYHKEINSQQLQQQQQQQQQASAGLISRSHTNSGSSPDTTGSVFDQPQPSSTDHLISYNPDYTNPASTYSTFQSLSACSAPAVSAASGTAPGTPVSAGHTPTSVSGNGSSAEWADYGNVDSTTSSFETPASRGANEIS--SPGAVAT 306 + AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSV+NYQCPR KNC VDRVNRNRCQYCRLQKCL LGMSRDAVKFGRMSKKQREKVEDEVR+H+ Q +A+ S ++PD+ SV++ PSS+D SYN YT S Y++ PGT S + +++ SA++ VDSTT+ P + ++ +P AT Sbjct: 5 IRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKNCVVDRVNRNRCQYCRLQKCLRLGMSRDAVKFGRMSKKQREKVEDEVRFHRA------------QMRAA----------SETAPDS--SVYEHQTPSSSDQHHSYNGGYTYGGSEYAS-----------------PGPGTGSSGYYNHQAITNYELSADY-----VDSTTAYDPRPTQTQVDTVAPDTPSVTAT 202
BLAST of hormone receptor vs. nr
Match: gi|1008445207|ref|XP_015837105.1| (PREDICTED: probable nuclear hormone receptor HR3 isoform X1 [Tribolium castaneum] >gi|1004398048|gb|EFA07440.2| hormone receptor in 46-like protein [Tribolium castaneum]) HSP 1 Score: 270.011 bits (689), Expect = 9.681e-79 Identity = 136/259 (52.51%), Postives = 184/259 (71.04%), Query Frame = 0 Query: 449 LLQEELQNDPERISALLTSSIFEAHTRTSLLSEDIIQERWKNGVDQSKVFAFKSMSQDELWLQCAQGLTSIITQIIEFAKMVPGFMKFPQDDQIVLLKGGVFELAIIRMSRYYDTSQSAVLFSDMMLPMDAFTVNRDTTEMRLANRIFDFAQDLAAMQLSEEALALYSAYILLQDDRPGLRNSDEVSKLNNAVLNTLQREITHRPPLVAVKGDVSIINKLMTKRHTLREISYMHLDALNKFRSNGGGQLDFPALHRELF 707 L+ + DP +IS LL+ +I +AHTRT L S + I E ++ D S++ +K+M+ +ELWL+CAQ LT+II QIIEFAKMVPGFMK QDDQIVLLK G FELAIIRMSRY D SQ+ VL+ D MLP DAF + DT EM+L +F+ ++ +A ++L+E LALYSA +LL DRPGL+ E+S+L+ AV+ L+ E+ R + +KGDV++ + L+TK TLREIS +H+DAL K + L+FPALH+ELF Sbjct: 240 LMANVVTTDPSQISELLSKTISDAHTRTCLYSLEHIHEMFRKPHDLSRLLYYKNMAHEELWLECAQKLTTIIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAIIRMSRYLDLSQNCVLYGDTMLPQDAFFTS-DTAEMKLVTCVFEVSKSIAELKLTETELALYSACVLLSPDRPGLKGIGEISRLSQAVVRALRLEL-DRNHSMPIKGDVTVCDALLTKIPTLREISMLHMDALGKLK-RSAPHLEFPALHKELF 495 HSP 2 Score: 226.868 bits (577), Expect = 1.555e-62 Identity = 114/161 (70.81%), Postives = 123/161 (76.40%), Query Frame = 0 Query: 65 LSAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVINYQCPRQKNCTVDRVNRNRCQYCRLQKCLNLGMSRDAVKFGRMSKKQREKVEDEVRYHKEINSQQLQQQQQQQQQASAGLISRSHTNSGSSPDTTGSVFDQPQPSSTDHL-ISYNPDYT 224 + AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSV+NYQCPR KNC VDRVNRNRCQYCRLQKCL LGMSRDAVKFGRMSKKQREKVEDEVR+H+ QL+ Q S S+PD+ SVF+Q PSS+D L SYN YT Sbjct: 50 IRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRNKNCVVDRVNRNRCQYCRLQKCLRLGMSRDAVKFGRMSKKQREKVEDEVRFHR----AQLRAQ------------------SDSAPDS--SVFEQQTPSSSDQLHHSYNGGYT 186 The following BLAST results are available for this feature:
BLAST of hormone receptor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of hormone receptor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of hormone receptor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1331_size47282:9641..23694- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1331_size47282-snap-gene-0.8 ID=maker-scaffold1331_size47282-snap-gene-0.8|Name=hormone receptor|organism=Tigriopus kingsejongensis|type=gene|length=14054bp|location=Sequence derived from alignment at scaffold1331_size47282:9641..23694- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'hormone receptor' has the following synonyms
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