activating molecule in becn1-regulated autophagy protein 1, maker-scaffold1362_size45580-snap-gene-0.14 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of activating molecule in becn1-regulated autophagy protein 1 vs. L. salmonis genes
Match: EMLSAG00000003377 (supercontig:LSalAtl2s:LSalAtl2s1854:10624:14619:-1 gene:EMLSAG00000003377 transcript:EMLSAT00000003377 description:"augustus_masked-LSalAtl2s1854-processed-gene-0.2") HSP 1 Score: 297.745 bits (761), Expect = 3.742e-87 Identity = 278/798 (34.84%), Postives = 382/798 (47.87%), Query Frame = 0 Query: 1 MQRICRESLSG-AIPRQRRQIIRLQSIRKMLEDLQVQIRSLRAASYQELQRREQERLNTDLISLAKYR--------TNQALTRLGSATRRAGASNRCPRVPGHTQGPSSRYPAVGPLRKSQNRSALLRARAQCQAASQMRASLRAFELSPDLARQG-KSPISQVKAQASLDVLEQTSPPPVARPTQSPKIKPAVKPLLLHEPPPLLLPVAQDTRTELRALSQRLERLLRSQRENTDR-GNFQPLEAQPEEPYPDLPPAIPRPS----------ARLSYRQRVRHLLEGTTEYDTIVDETQSPAADPFASTSDSDGNEGEEEPFEEPGFTR---------HNGLGAGRR----LHPPPPEASLRRSGHQPRHMRSL----IREWNDSVARVRRDAERERRRRVSRDPDILRRRRRYGRHLGDPDLSASLLALDRSSPLSRPEHGSVPPEGPAPTSFNTVSPLREQIWRRLRRRNAQLNQLDSQI-------------LAETGSRERSRHREMLSWMVDQLSIDQPQLVHMVPEGEVRSSANEAIPTANNDSLSLAMSSSGHNPDPTSAGGAASARGRSFFNHPLRHRHYQYFERRDPLLMAPFSLRSIDGIESGQMLAVNRVQAWDF--VRGNIPDIADTTANVVVKEANIVGAASVDISENGAILVTLSPSSVPMTTVVGVYSLKPETRGQCYATLSLESSVVSVSLSPTSRHLLVGLNRHNRHRMPFNPNERGTMAHVFRIQLPWERGAERGRLIHKRDIPHVEQS---SLNCIRWIPLPGQGIAYATNTGLLKILR 742 MQRIC+ SL ++ RQRRQI+RLQ+IR MLEDLQ QIR+LR ++ + + + + ++++ R N+A+ RL +T S R + PS A R S N + L S++RA++RA E+SPDL+ G + ++++ A+ SL VLE+T + +R LRA+SQRLERL+R RE ++ NF L PE+ P+ A+PR S A + + EG + + + A P ++SDS EG+ E ++ G R N L P R + R+MR L +RE DS A RRD ER R+R +SR I +RR R +G+ S+S A ++SSP + + R L RRN QLN L+ +I + ++R HRE+LSWMVDQL+IDQ GE +P +S+ +S + + S G A G F N +R ++Q + FS A +R+Q WDF N+PDI D T N++V++A I ASVDIS +G ILVT SS+PMT +VGVY G CYAT SLES+ VSVSLSPT+RHLLVG++ + RM P +R MA VF+I PW+R AERGRL+H RDI H + LNCIRWIP PGQGI YATNTGLL+ILR Sbjct: 524 MQRICQTSLRYLSVSRQRRQILRLQAIRMMLEDLQNQIRNLRESTLERPDSLTNQSTSNNALAMSITRRLHITREGLNRAMRRLNRSTNYTLTSRRTNPSRSSSVPPSYSTQA----RYSYNCMSRL-------ILSRLRATIRAMEMSPDLSHSGYNNSVNELIAEESLAVLERTESTTNGENS---------------------------SRNALRAMSQRLERLIRDNREASNNVNNFDNL--IPEDTSPE---AVPRSSNDNQSPQEEQANNNDDPTISLSSEGQQRNWSHLLDHGGYARQPRETSSDS---EGDAEILQQRGVGRRRWRLFQEEQNSEEVNDEESLELLNWMPSPGFNRRLNSVRNMRDLGRASMRERLDSRAEYRRDWERARQR-LSRARMIFHQRRE--REMGE---SSSGGASNQSSP-----------------------QVDNWVLRYLLRRNMQLNALEDEIGELNVDQQRQPLRQLQQSQQQRPLHREILSWMVDQLTIDQQGNSGRAEAGEPGLPPGAVLPPPVPESIYRRRXASFYFRNHES-GEAGPHNG--FPN--VRDNYFQQLRNHN------FS-------------ATHRLQIWDFNSKSTNLPDIGDRTKNIIVEKAKIYNDASVDISSDGNILVTFCSSSLPMTPIVGVYGCSTSNLGICYATYSLESTAVSVSLSPTNRHLLVGVSTKS-ERMDVAPLDRSLMAQVFKIHYPWDRKAERGRLVHHRDIHHSPEHGYIGLNCIRWIPNPGQGIVYATNTGLLQILR 1221
BLAST of activating molecule in becn1-regulated autophagy protein 1 vs. SwissProt
Match: gi|166215833|sp|Q9C0C7.2|AMRA1_HUMAN (RecName: Full=Activating molecule in BECN1-regulated autophagy protein 1) HSP 1 Score: 110.153 bits (274), Expect = 2.076e-23 Identity = 64/182 (35.16%), Postives = 95/182 (52.20%), Query Frame = 0 Query: 569 RVQAWDFVRGNIPDIADTTANVVVKEANIVGAASVDISENGAILVTLSPSS---VPMTTVVGVYSLKPETRGQCYATLSLESSVVSVSLSPTSRHLLVGLNRHNRHRMPFNPNERGTMAHVFRIQLPWERGAERG-----RLIHKRDIPHVEQSSLNCIRWIPLPGQGIAYATNTGLLKILR 742 R+Q WDF + ++P+I++ + NV+V+ I AS DIS +G +L PSS P ++ VYSL P G+ T + +SVSLSP R+++VGL R+ +P+ +A VFR+Q G E +++ S+N RW+P PG G+AY TN G L I R Sbjct: 861 RLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCDISADGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVMVGL---ASRRILLHPSTEHMVAQVFRLQQ--AHGGETSMRRVFNVLYPMPADQRRHVSINSARWLPEPGLGLAYGTNKGDLVICR 1037
BLAST of activating molecule in becn1-regulated autophagy protein 1 vs. SwissProt
Match: gi|166215823|sp|A2AH22.1|AMRA1_MOUSE (RecName: Full=Activating molecule in BECN1-regulated autophagy protein 1) HSP 1 Score: 109.768 bits (273), Expect = 2.578e-23 Identity = 64/182 (35.16%), Postives = 95/182 (52.20%), Query Frame = 0 Query: 569 RVQAWDFVRGNIPDIADTTANVVVKEANIVGAASVDISENGAILVTLSPSS---VPMTTVVGVYSLKPETRGQCYATLSLESSVVSVSLSPTSRHLLVGLNRHNRHRMPFNPNERGTMAHVFRIQLPWERGAERG-----RLIHKRDIPHVEQSSLNCIRWIPLPGQGIAYATNTGLLKILR 742 R+Q WDF + ++P+I++ + NV+V+ I AS DIS +G +L PSS P ++ VYSL P G+ T + +SVSLSP R+++VGL R+ +P+ +A VFR+Q G E +++ S+N RW+P PG G+AY TN G L I R Sbjct: 862 RLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCDISADGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVMVGL---ASRRILLHPSTEHMVAQVFRLQQ--AHGGETSMRRVFNVLYPMPADQRRHVSINSARWLPEPGLGLAYGTNKGDLVICR 1038
BLAST of activating molecule in becn1-regulated autophagy protein 1 vs. nr
Match: gi|1059388666|ref|XP_017769522.1| (PREDICTED: uncharacterized protein LOC108557506 isoform X2 [Nicrophorus vespilloides]) HSP 1 Score: 145.976 bits (367), Expect = 3.534e-32 Identity = 79/178 (44.38%), Postives = 110/178 (61.80%), Query Frame = 0 Query: 569 RVQAWDFVRGNIPDIADTTANVVVKEANIVGAASVDISENGAILVTLSPSS--VPMTTVVGVYSLKPETRGQCYATLSLESSVVSVSLSPTSRHLLVGLNRHNRHRMPFNPNERGTMAHVFRIQLPWERGAERGRLIHKRDIPH---VEQSSLNCIRWIPLPGQGIAYATNTGLLKIL 741 R+Q W+F + NIP+I + T NVVV+E I ASVD + NG ILVTL PS + +T +GVYSL +T GQC + E + VSVSLSP +RHL+VGL R+ P++R TMA +F+++ E G++ RD+ S+NCIRW+P G+G+ +ATNTG L+ L Sbjct: 1602 RIQVWEFSKDNIPNIREATKNVVVRECKIHNDASVDYATNGTILVTLLPSGGYMNITNRLGVYSLDWKTLGQCLYLANFEQNAVSVSLSPLNRHLIVGL---ASRRVSIMPSDRWTMARIFKLE-----KNEYGKMTPIRDLEQNRDTNYMSVNCIRWMPNSGEGLVFATNTGHLRFL 1771
BLAST of activating molecule in becn1-regulated autophagy protein 1 vs. nr
Match: gi|1133435513|ref|XP_019873949.1| (PREDICTED: uncharacterized protein LOC109602065 isoform X2 [Aethina tumida]) HSP 1 Score: 145.976 bits (367), Expect = 3.759e-32 Identity = 80/175 (45.71%), Postives = 109/175 (62.29%), Query Frame = 0 Query: 569 RVQAWDFVRGNIPDIADTTANVVVKEANIVGAASVDISENGAILVTLSPSS--VPMTTVVGVYSLKPETRGQCYATLSLESSVVSVSLSPTSRHLLVGLNRHNRHRMPFNPNERGTMAHVFRIQLPWERGAERGRLIHKRDIPHVEQSSLNCIRWIPLPGQGIAYATNTGLLKIL 741 R+QAWD ++P I+++ NV+V E I ASVDI+++G +LVTL PS + +T +GVYSL+ ET GQC T S E + VSVSLSP SRHLLVGL R+ ++R MA +F+I+ ++ RL R++ S +NCIRW+P GQGI Y TNTG L +L Sbjct: 1942 RLQAWDISDWSVPSISNSLKNVIVGECKIHNDASVDIAKDGTLLVTLLPSGGYLNVTNRLGVYSLRWETLGQCLYTTSFEQNAVSVSLSPLSRHLLVGL---ASRRVSIVTHDRWAMARIFKIE---QKDVPGDRLPMIRELDQSRDSRINCIRWLPYSGQGIIYGTNTGQLIVL 2110
BLAST of activating molecule in becn1-regulated autophagy protein 1 vs. nr
Match: gi|1133435511|ref|XP_019873948.1| (PREDICTED: uncharacterized protein LOC109602065 isoform X1 [Aethina tumida]) HSP 1 Score: 145.976 bits (367), Expect = 3.863e-32 Identity = 80/175 (45.71%), Postives = 109/175 (62.29%), Query Frame = 0 Query: 569 RVQAWDFVRGNIPDIADTTANVVVKEANIVGAASVDISENGAILVTLSPSS--VPMTTVVGVYSLKPETRGQCYATLSLESSVVSVSLSPTSRHLLVGLNRHNRHRMPFNPNERGTMAHVFRIQLPWERGAERGRLIHKRDIPHVEQSSLNCIRWIPLPGQGIAYATNTGLLKIL 741 R+QAWD ++P I+++ NV+V E I ASVDI+++G +LVTL PS + +T +GVYSL+ ET GQC T S E + VSVSLSP SRHLLVGL R+ ++R MA +F+I+ ++ RL R++ S +NCIRW+P GQGI Y TNTG L +L Sbjct: 1948 RLQAWDISDWSVPSISNSLKNVIVGECKIHNDASVDIAKDGTLLVTLLPSGGYLNVTNRLGVYSLRWETLGQCLYTTSFEQNAVSVSLSPLSRHLLVGL---ASRRVSIVTHDRWAMARIFKIE---QKDVPGDRLPMIRELDQSRDSRINCIRWLPYSGQGIIYGTNTGQLIVL 2116
BLAST of activating molecule in becn1-regulated autophagy protein 1 vs. nr
Match: gi|1059388659|ref|XP_017769519.1| (PREDICTED: uncharacterized protein LOC108557506 isoform X1 [Nicrophorus vespilloides] >gi|1059388662|ref|XP_017769520.1| PREDICTED: uncharacterized protein LOC108557506 isoform X1 [Nicrophorus vespilloides] >gi|1059388664|ref|XP_017769521.1| PREDICTED: uncharacterized protein LOC108557506 isoform X1 [Nicrophorus vespilloides]) HSP 1 Score: 145.976 bits (367), Expect = 4.238e-32 Identity = 79/178 (44.38%), Postives = 110/178 (61.80%), Query Frame = 0 Query: 569 RVQAWDFVRGNIPDIADTTANVVVKEANIVGAASVDISENGAILVTLSPSS--VPMTTVVGVYSLKPETRGQCYATLSLESSVVSVSLSPTSRHLLVGLNRHNRHRMPFNPNERGTMAHVFRIQLPWERGAERGRLIHKRDIPH---VEQSSLNCIRWIPLPGQGIAYATNTGLLKIL 741 R+Q W+F + NIP+I + T NVVV+E I ASVD + NG ILVTL PS + +T +GVYSL +T GQC + E + VSVSLSP +RHL+VGL R+ P++R TMA +F+++ E G++ RD+ S+NCIRW+P G+G+ +ATNTG L+ L Sbjct: 1623 RIQVWEFSKDNIPNIREATKNVVVRECKIHNDASVDYATNGTILVTLLPSGGYMNITNRLGVYSLDWKTLGQCLYLANFEQNAVSVSLSPLNRHLIVGL---ASRRVSIMPSDRWTMARIFKLE-----KNEYGKMTPIRDLEQNRDTNYMSVNCIRWMPNSGEGLVFATNTGHLRFL 1792
BLAST of activating molecule in becn1-regulated autophagy protein 1 vs. nr
Match: gi|1004399701|gb|KYB27382.1| (hypothetical protein TcasGA2_TC033221 [Tribolium castaneum]) HSP 1 Score: 143.665 bits (361), Expect = 2.675e-31 Identity = 82/175 (46.86%), Postives = 106/175 (60.57%), Query Frame = 0 Query: 569 RVQAWDFVRGNIPDIADTTANVVVKEANIVGAASVDISENGAILVTLSPSS--VPMTTVVGVYSLKPETRGQCYATLSLESSVVSVSLSPTSRHLLVGLNRHNRHRMPFNPNERGTMAHVFRIQ---LPWERGAERGRLIHKRDIPHVEQSSLNCIRWIPLPGQGIAYATNTGLL 738 R+Q WD GNIP I + N++V E I ASVDI+++G ILVTL PS + +T +GVYSL+ +T GQC T S E + VSV+LSP SRHL+VGL R+ P++R TMA +F I+ P +R L RD S+NCIRW+P GQG+ YATNTG L Sbjct: 1610 RIQMWDISSGNIPVINNPLKNLIVSECKIHNDASVDIAKDGTILVTLLPSGGYLNVTNKLGVYSLRWDTLGQCLYTTSFEQNAVSVALSPLSRHLVVGL---ASRRVSIVPSDRWTMARIFIIEQKNAPGDRLPVLRELGQNRD-SRANYKSVNCIRWLPTSGQGLIYATNTGQL 1780 The following BLAST results are available for this feature:
BLAST of activating molecule in becn1-regulated autophagy protein 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of activating molecule in becn1-regulated autophagy protein 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 2
BLAST of activating molecule in becn1-regulated autophagy protein 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1362_size45580:22..3893+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1362_size45580-snap-gene-0.14 ID=maker-scaffold1362_size45580-snap-gene-0.14|Name=activating molecule in becn1-regulated autophagy protein 1|organism=Tigriopus kingsejongensis|type=gene|length=3872bp|location=Sequence derived from alignment at scaffold1362_size45580:22..3893+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'activating molecule in becn1-regulated autophagy protein 1' has the following synonyms
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