atp-binding cassette sub-family d member 4-like, maker-scaffold1373_size44751-snap-gene-0.3 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of atp-binding cassette sub-family d member 4-like vs. L. salmonis genes
Match: EMLSAG00000005788 (supercontig:LSalAtl2s:LSalAtl2s3118:3124:4893:1 gene:EMLSAG00000005788 transcript:EMLSAT00000005788 description:"augustus_masked-LSalAtl2s3118-processed-gene-0.0") HSP 1 Score: 84.7297 bits (208), Expect = 8.433e-19 Identity = 38/107 (35.51%), Postives = 65/107 (60.75%), Query Frame = 0 Query: 176 LGFHQSAPVKSVNANEWLLRLRVTQQSLFHRQLALDLATQTFSYFGSIASFLVIVIPIFSGLYDGYSPGKLEQVVSKNAFVCMYIVFQFTHLVQMAAGMSRLAVVAH 282 + F SA ++S+ N+ L L +Q S++ ++ LDL F Y G+I S+L+I +P+F+G YD KL +S+N+FVCM +++ + LV +A+ + +A V H Sbjct: 235 IAFSNSAIIESIKTNKLLKSLIKSQLSVYTWEILLDLWINIFDYVGAIISYLIIAVPVFTGFYDSLDQAKLGNQISQNSFVCMTLIYNLSQLVDLASKFANMAGVTH 341
BLAST of atp-binding cassette sub-family d member 4-like vs. L. salmonis genes
Match: EMLSAG00000005996 (supercontig:LSalAtl2s:LSalAtl2s324:163173:165128:-1 gene:EMLSAG00000005996 transcript:EMLSAT00000005996 description:"maker-LSalAtl2s324-augustus-gene-1.35") HSP 1 Score: 66.2402 bits (160), Expect = 1.422e-12 Identity = 32/84 (38.10%), Postives = 52/84 (61.90%), Query Frame = 0 Query: 199 TQQSLFHRQLALDLATQTFSYFGSIASFLVIVIPIFSGLYDGYSPGKLEQVVSKNAFVCMYIVFQFTHLVQMAAGMSRLAVVAH 282 Q+ L L+LAT F Y SI S+L++ IP+++G Y G + +L ++S+ AFV + ++ +F+ LV +A +SRLA V H Sbjct: 254 AQRKLVLATYRLNLATNFFDYGASIISYLIVGIPVYNGFYKGLNVEELSGIISETAFVNIMLISKFSRLVDLAGKVSRLASVTH 337
BLAST of atp-binding cassette sub-family d member 4-like vs. SwissProt
Match: gi|338817849|sp|O89016.2|ABCD4_MOUSE (RecName: Full=ATP-binding cassette sub-family D member 4; AltName: Full=PMP70-related protein; Short=P70R; AltName: Full=Peroxisomal membrane protein 1-like; Short=PXMP1-L; AltName: Full=Peroxisomal membrane protein 69; Short=PMP69) HSP 1 Score: 90.5077 bits (223), Expect = 2.861e-19 Identity = 45/106 (42.45%), Postives = 67/106 (63.21%), Query Frame = 0 Query: 177 GFHQSAPVKSVNANEWLLRLRVTQQSLFHRQLALDLATQTFSYFGSIASFLVIVIPIFSGLYDGYSPGKLEQVVSKNAFVCMYIVFQFTHLVQMAAGMSRLAVVAH 282 F+++ V+ + + L RL TQ+ L R+L L + TF Y GSI S++VI IPIFSG+Y SP +L +VSKNAFVC+Y++ FT L+ ++ +S +A H Sbjct: 237 AFYRAGLVEHMRTDRRLQRLLQTQRELMSRELWLYIGINTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCIYLISCFTQLIDLSTTLSDVAGYTH 342
BLAST of atp-binding cassette sub-family d member 4-like vs. SwissProt
Match: gi|6831464|sp|O14678.1|ABCD4_HUMAN (RecName: Full=ATP-binding cassette sub-family D member 4; AltName: Full=PMP70-related protein; Short=P70R; AltName: Full=Peroxisomal membrane protein 1-like; Short=PXMP1-L; AltName: Full=Peroxisomal membrane protein 69; Short=PMP69) HSP 1 Score: 89.7373 bits (221), Expect = 5.745e-19 Identity = 44/105 (41.90%), Postives = 67/105 (63.81%), Query Frame = 0 Query: 178 FHQSAPVKSVNANEWLLRLRVTQQSLFHRQLALDLATQTFSYFGSIASFLVIVIPIFSGLYDGYSPGKLEQVVSKNAFVCMYIVFQFTHLVQMAAGMSRLAVVAH 282 F+++ V+ + + L RL TQ+ L ++L L + TF Y GSI S++VI IPIFSG+Y SP +L +VSKNAFVC+Y++ FT L+ ++ +S +A H Sbjct: 238 FYRAGHVEHMRTDRRLQRLLQTQRELMSKELWLYIGINTFDYLGSILSYVVIAIPIFSGVYGDLSPAELSTLVSKNAFVCIYLISCFTQLIDLSTTLSDVAGYTH 342
BLAST of atp-binding cassette sub-family d member 4-like vs. nr
Match: gi|586962540|gb|AHK05658.1| (ATP-binding cassette transporter sub-family D member 4 isoform X2 [Tigriopus japonicus]) HSP 1 Score: 150.984 bits (380), Expect = 6.303e-38 Identity = 76/108 (70.37%), Postives = 88/108 (81.48%), Query Frame = 0 Query: 175 SLGFHQSAPVKSVNANEWLLRLRVTQQSLFHRQLALDLATQTFSYFGSIASFLVIVIPIFSGLYDGYSPGKLEQVVSKNAFVCMYIVFQFTHLVQMAAGMSRLAVVAH 282 SL FH+SA V+S+ ++E LL L TQQSLF+RQLALDLAT FSY GSIASFLVI IPIFSG+YD SP +L Q VS+NAFVCMY+VFQFT LVQMA+ +SRLA V H Sbjct: 228 SLAFHKSARVESIKSDEKLLSLCQTQQSLFNRQLALDLATNVFSYMGSIASFLVIAIPIFSGVYDNLSPSQLAQAVSENAFVCMYLVFQFTKLVQMASTVSRLAGVTH 335
BLAST of atp-binding cassette sub-family d member 4-like vs. nr
Match: gi|1049267384|ref|XP_017573790.1| (PREDICTED: ATP-binding cassette sub-family D member 4 isoform X2 [Pygocentrus nattereri]) HSP 1 Score: 102.449 bits (254), Expect = 6.812e-21 Identity = 48/108 (44.44%), Postives = 73/108 (67.59%), Query Frame = 0 Query: 175 SLGFHQSAPVKSVNANEWLLRLRVTQQSLFHRQLALDLATQTFSYFGSIASFLVIVIPIFSGLYDGYSPGKLEQVVSKNAFVCMYIVFQFTHLVQMAAGMSRLAVVAH 282 S F+++ V+ + N L RL TQ+SL +++L L + TF Y GSI S++VI IPIF+G+YDG +PG+L +VSKNAFVC+Y++ FT L+ ++ +S +A H Sbjct: 194 SAAFYRAGKVECMRTNWRLQRLLRTQRSLMNKELWLYIGVNTFDYLGSILSYVVIAIPIFAGVYDGMTPGELSSLVSKNAFVCIYLINCFTQLIDLSTTLSDVAGYTH 301
BLAST of atp-binding cassette sub-family d member 4-like vs. nr
Match: gi|1049267382|ref|XP_017573789.1| (PREDICTED: ATP-binding cassette sub-family D member 4 isoform X1 [Pygocentrus nattereri]) HSP 1 Score: 102.449 bits (254), Expect = 8.043e-21 Identity = 48/108 (44.44%), Postives = 73/108 (67.59%), Query Frame = 0 Query: 175 SLGFHQSAPVKSVNANEWLLRLRVTQQSLFHRQLALDLATQTFSYFGSIASFLVIVIPIFSGLYDGYSPGKLEQVVSKNAFVCMYIVFQFTHLVQMAAGMSRLAVVAH 282 S F+++ V+ + N L RL TQ+SL +++L L + TF Y GSI S++VI IPIF+G+YDG +PG+L +VSKNAFVC+Y++ FT L+ ++ +S +A H Sbjct: 233 SAAFYRAGKVECMRTNWRLQRLLRTQRSLMNKELWLYIGVNTFDYLGSILSYVVIAIPIFAGVYDGMTPGELSSLVSKNAFVCIYLINCFTQLIDLSTTLSDVAGYTH 340
BLAST of atp-binding cassette sub-family d member 4-like vs. nr
Match: gi|1041118106|ref|XP_017282804.1| (PREDICTED: ATP-binding cassette sub-family D member 4 isoform X2 [Kryptolebias marmoratus]) HSP 1 Score: 97.8265 bits (242), Expect = 2.214e-19 Identity = 44/108 (40.74%), Postives = 70/108 (64.81%), Query Frame = 0 Query: 175 SLGFHQSAPVKSVNANEWLLRLRVTQQSLFHRQLALDLATQTFSYFGSIASFLVIVIPIFSGLYDGYSPGKLEQVVSKNAFVCMYIVFQFTHLVQMAAGMSRLAVVAH 282 S F+++ V+ V N L L TQ+SL +++L L + TF Y G S+++I IPIF+G+YDG +PG+L ++SKNAFVC+Y++ FT L+ ++ +S +A H Sbjct: 129 SAAFYRAGKVEHVRTNRRLQTLLQTQKSLINKELWLYIGVNTFDYLGGFLSYIIIAIPIFTGVYDGLTPGELSALISKNAFVCIYLINGFTQLIDLSTTLSDVAGYTH 236
BLAST of atp-binding cassette sub-family d member 4-like vs. nr
Match: gi|1020401524|ref|XP_016093825.1| (PREDICTED: ATP-binding cassette sub-family D member 4 isoform X2 [Sinocyclocheilus grahami]) HSP 1 Score: 98.2117 bits (243), Expect = 2.589e-19 Identity = 47/108 (43.52%), Postives = 71/108 (65.74%), Query Frame = 0 Query: 175 SLGFHQSAPVKSVNANEWLLRLRVTQQSLFHRQLALDLATQTFSYFGSIASFLVIVIPIFSGLYDGYSPGKLEQVVSKNAFVCMYIVFQFTHLVQMAAGMSRLAVVAH 282 S F+++ V+ + N L L TQ+SL +++L L + TF Y GSI S++VI IPIF+G YDG +PG+L +VSKNAFVC+Y++ FT L+ ++ +S +A H Sbjct: 233 SAAFYRAGKVEHMRTNRRLQMLLSTQRSLMNKELWLYVGVNTFDYLGSILSYIVIAIPIFAGDYDGLTPGELSALVSKNAFVCIYLINCFTQLIDLSTTVSDVAGYTH 340
BLAST of atp-binding cassette sub-family d member 4-like vs. nr
Match: gi|1020401522|ref|XP_016093821.1| (PREDICTED: ATP-binding cassette sub-family D member 4 isoform X1 [Sinocyclocheilus grahami]) HSP 1 Score: 98.2117 bits (243), Expect = 2.644e-19 Identity = 47/108 (43.52%), Postives = 71/108 (65.74%), Query Frame = 0 Query: 175 SLGFHQSAPVKSVNANEWLLRLRVTQQSLFHRQLALDLATQTFSYFGSIASFLVIVIPIFSGLYDGYSPGKLEQVVSKNAFVCMYIVFQFTHLVQMAAGMSRLAVVAH 282 S F+++ V+ + N L L TQ+SL +++L L + TF Y GSI S++VI IPIF+G YDG +PG+L +VSKNAFVC+Y++ FT L+ ++ +S +A H Sbjct: 233 SAAFYRAGKVEHMRTNRRLQMLLSTQRSLMNKELWLYVGVNTFDYLGSILSYIVIAIPIFAGDYDGLTPGELSALVSKNAFVCIYLINCFTQLIDLSTTVSDVAGYTH 340
BLAST of atp-binding cassette sub-family d member 4-like vs. nr
Match: gi|1143397759|ref|XP_019953328.1| (PREDICTED: ATP-binding cassette sub-family D member 4 [Paralichthys olivaceus]) HSP 1 Score: 98.2117 bits (243), Expect = 2.704e-19 Identity = 44/108 (40.74%), Postives = 70/108 (64.81%), Query Frame = 0 Query: 175 SLGFHQSAPVKSVNANEWLLRLRVTQQSLFHRQLALDLATQTFSYFGSIASFLVIVIPIFSGLYDGYSPGKLEQVVSKNAFVCMYIVFQFTHLVQMAAGMSRLAVVAH 282 S F +S V+ + N L L +TQ+SL +++L L + TF Y G S+++I IPIF+G+YDG +PG+L ++SKNAFVC+Y++ FT L+ ++ +S +A H Sbjct: 236 SAAFFRSGKVEHMRTNRRLQTLLLTQKSLINKELWLYIGVNTFDYLGGFLSYIIIAIPIFTGIYDGLTPGELSGLISKNAFVCIYLINGFTQLIDLSTTLSDVAGYTH 343
BLAST of atp-binding cassette sub-family d member 4-like vs. nr
Match: gi|1041118104|ref|XP_017282803.1| (PREDICTED: ATP-binding cassette sub-family D member 4 isoform X1 [Kryptolebias marmoratus]) HSP 1 Score: 97.8265 bits (242), Expect = 3.439e-19 Identity = 44/108 (40.74%), Postives = 70/108 (64.81%), Query Frame = 0 Query: 175 SLGFHQSAPVKSVNANEWLLRLRVTQQSLFHRQLALDLATQTFSYFGSIASFLVIVIPIFSGLYDGYSPGKLEQVVSKNAFVCMYIVFQFTHLVQMAAGMSRLAVVAH 282 S F+++ V+ V N L L TQ+SL +++L L + TF Y G S+++I IPIF+G+YDG +PG+L ++SKNAFVC+Y++ FT L+ ++ +S +A H Sbjct: 236 SAAFYRAGKVEHVRTNRRLQTLLQTQKSLINKELWLYIGVNTFDYLGGFLSYIIIAIPIFTGVYDGLTPGELSALISKNAFVCIYLINGFTQLIDLSTTLSDVAGYTH 343
BLAST of atp-binding cassette sub-family d member 4-like vs. nr
Match: gi|1168971397|ref|XP_020445432.1| (ATP-binding cassette sub-family D member 4 [Monopterus albus]) HSP 1 Score: 97.0561 bits (240), Expect = 6.172e-19 Identity = 43/108 (39.81%), Postives = 70/108 (64.81%), Query Frame = 0 Query: 175 SLGFHQSAPVKSVNANEWLLRLRVTQQSLFHRQLALDLATQTFSYFGSIASFLVIVIPIFSGLYDGYSPGKLEQVVSKNAFVCMYIVFQFTHLVQMAAGMSRLAVVAH 282 S F+++ V+ + N L L TQ+SL +++L L + TF Y G S+++I IPIF+G+YDG +PG+L ++SKNAFVC+Y++ FT L+ ++ +S +A H Sbjct: 236 SAAFYRAGKVEHMRTNRRLQALLQTQKSLINKELWLYIGVNTFDYLGGFLSYIIIAIPIFTGIYDGLTPGELSALISKNAFVCIYLINGFTQLIDLSTTLSDVAGYTH 343
BLAST of atp-binding cassette sub-family d member 4-like vs. nr
Match: gi|1025040318|ref|XP_016327452.1| (PREDICTED: ATP-binding cassette sub-family D member 4-like [Sinocyclocheilus anshuiensis]) HSP 1 Score: 97.0561 bits (240), Expect = 6.366e-19 Identity = 46/108 (42.59%), Postives = 71/108 (65.74%), Query Frame = 0 Query: 175 SLGFHQSAPVKSVNANEWLLRLRVTQQSLFHRQLALDLATQTFSYFGSIASFLVIVIPIFSGLYDGYSPGKLEQVVSKNAFVCMYIVFQFTHLVQMAAGMSRLAVVAH 282 S F+++ V+ + + L L TQ+SL +++L L + TF Y GSI S++VI IPIF+G YDG +PG+L +VSKNAFVC+Y++ FT L+ ++ +S +A H Sbjct: 232 SAAFYRAGKVEHMRTDRRLQMLLSTQRSLMNKELWLYIGVNTFDYLGSILSYIVIAIPIFAGEYDGLTPGELSALVSKNAFVCIYLINCFTQLIDLSTTVSDVAGYTH 339 The following BLAST results are available for this feature:
BLAST of atp-binding cassette sub-family d member 4-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of atp-binding cassette sub-family d member 4-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 2
BLAST of atp-binding cassette sub-family d member 4-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1373_size44751:5153..23984- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1373_size44751-snap-gene-0.3 ID=maker-scaffold1373_size44751-snap-gene-0.3|Name=atp-binding cassette sub-family d member 4-like|organism=Tigriopus kingsejongensis|type=gene|length=18832bp|location=Sequence derived from alignment at scaffold1373_size44751:5153..23984- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'atp-binding cassette sub-family d member 4-like' has the following synonyms
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