orphan nuclear receptor, maker-scaffold1404_size42976-snap-gene-0.13 (gene) Tigriopus kingsejongensis

Overview
Nameorphan nuclear receptor
Unique Namemaker-scaffold1404_size42976-snap-gene-0.13
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000007741 (supercontig:LSalAtl2s:LSalAtl2s450:172104:174744:-1 gene:EMLSAG00000007741 transcript:EMLSAT00000007741 description:"maker-LSalAtl2s450-snap-gene-2.9")

HSP 1 Score: 216.853 bits (551), Expect = 1.662e-63
Identity = 96/103 (93.20%), Postives = 100/103 (97.09%), Query Frame = 0 
Query:    1 MGTGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGPRKSKLQKELAA 103
            MGTGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHR R+YTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFD +MNKDAVQHERGPRKSKLQK+L +
Sbjct:   97 MGTGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRQRIYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDCSMNKDAVQHERGPRKSKLQKDLNS 199
[Close]
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000007894 (supercontig:LSalAtl2s:LSalAtl2s466:351370:353021:1 gene:EMLSAG00000007894 transcript:EMLSAT00000007894 description:"maker-LSalAtl2s466-augustus-gene-2.7")

HSP 1 Score: 159.458 bits (402), Expect = 4.923e-44
Identity = 70/101 (69.31%), Postives = 84/101 (83.17%), Query Frame = 0 
Query:    3 TGDRLL-DIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGPRKSKLQKELA 102
            T  R+L DIPCKVC D SSGKHYGI++CDGC+GFFKRSI R+R+Y CKA+ E  G C +DKTHRNQCRACRLK+C D  MNKDAVQHERGPR S L+++++
Sbjct:   24 TSSRILYDIPCKVCTDHSSGKHYGIFACDGCAGFFKRSIRRNRLYVCKAKSE--GSCLVDKTHRNQCRACRLKRCVDVGMNKDAVQHERGPRNSTLRRQMS 122

HSP 2 Score: 146.747 bits (369), Expect = 2.845e-39
Identity = 88/220 (40.00%), Postives = 124/220 (56.36%), Query Frame = 0 
Query:  282 PYPPPT-SLSGLSPSIVPSWDTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFK---PETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDMYNA 497
            PY PPT   SGL      + + + ET ARLLFM VRW + +  F +L  +DQLLLL+ESW++LFLL  +Q+ +P            +L+ S D +       V  E+K  QE + +F+ +  D TE  CL+AI+LFK    E   L D   +  LQDQAQ  L+ Y+   YP QP RFG+LLL +P LR +  + +E  FF+ T+G   + R++ DM  A
Sbjct:  227 PYAPPTFHTSGLR-----NPENVSETAARLLFMNVRWAQNVPAFTSLPYRDQLLLLEESWRELFLLSSAQFNLP-----------VELVASQDKSIS-----VLSELKNFQEAIAKFQSMQVDTTEFACLRAIILFKTVLEEEKELRDTSSITSLQDQAQLTLSKYISXAYPGQPMRFGKLLLLLPSLRSVSGNVIEELFFKKTIGPIPIERIICDMXKA 425
[Close]
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000009940 (supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-1 gene:EMLSAG00000009940 transcript:EMLSAT00000009940 description:"maker-LSalAtl2s649-augustus-gene-4.7")

HSP 1 Score: 145.976 bits (367), Expect = 1.531e-37
Identity = 81/213 (38.03%), Postives = 120/213 (56.34%), Query Frame = 0 
Query:  284 PPPTSLSG-LSPSIVPSWDTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLM-LSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFKPETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDM 494
            P PTS  G +  S +   D + E  ARLLF A+ W + +  F  L   DQ+ LL+  W +LF+L+ SQ  +P  +  LL++       +++D      DH     I+   E + + + I  D  E  C+KAIVLF  +  GLTD+  +E LQ+++QC L +Y R +YP QPTRFGRLLL  P LR + ++ +E  FF   VG T ++ L++DM
Sbjct:  140 PYPTSRYGQMQMSNMVGIDNICEFAARLLFSAIEWARNIPGFPDLPITDQVALLRLVWSELFVLNASQCNMPIHIAPLLAAAGLHASPMAADRVVAYMDH-----IRIFXEQVEKLKSIHVDSAEYSCMKAIVLFTTDAPGLTDVSVIEQLQEKSQCALEEYCRTQYPNQPTRFGRLLLRFPSLRTVSSTVIEQLFFIRLVGKTPIDNLIRDM 347

HSP 2 Score: 137.502 bits (345), Expect = 1.034e-34
Identity = 72/196 (36.73%), Postives = 112/196 (57.14%), Query Frame = 0 
Query:  301 DTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMSDDHLVDM--EIKTMQEMMCRFRQISPDGTECGCLKAIVLFKPETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDM 494
            D + E  ARLLF A+ W + +  F  L   DQ+ LL+  W +LF+L+ SQ  +P  +  LL++          +  M  D +V    +I+  QE + + + +  D  E  C+KA+VLF  +  GL++ + +E LQ+++QC L DY RN YP QP+RFG+LLL +P LR + +  +E  FF   VG T +  L++DM
Sbjct:  586 DNICEFAARLLFSAIEWARNIPGFPELPVTDQVALLRLVWSELFVLNASQCNMPLHIAPLLAAAGLH------ANPMPADKVVAFMDQIRIFQEQVEKLKGLHVDPAEYSCMKAVVLFTTDACGLSESNMIEQLQEKSQCALEDYCRNHYPNQPSRFGKLLLRLPSLRTVSSGVIEQLFFVRLVGKTPIETLIRDM 775

HSP 3 Score: 108.997 bits (271), Expect = 2.062e-25
Identity = 49/97 (50.52%), Postives = 60/97 (61.86%), Query Frame = 0 
Query:    9 DIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGPRKSKLQKELAANG 105
            DI C VCGD+SSGKHYG ++C+GC  FFKRS+ R+  Y C+        CPID+ HRNQC+ CRLKKC    M K+AVQ  R P   +       NG
Sbjct:  431 DISCVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRALTYQCRGSRS----CPIDQHHRNQCQHCRLKKCIKMGMRKEAVQRGRIPASQQNVLPFGFNG 523
[Close]
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000009969 (supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5")

HSP 1 Score: 138.272 bits (347), Expect = 7.491e-36
Identity = 73/195 (37.44%), Postives = 112/195 (57.44%), Query Frame = 0 
Query:  301 DTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLM-LSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFKPETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDM 494
            D + E  ARLLF A+ W + +  F  L   DQ+ LL+  W +LF+L+ SQ  +P  +  LL +       L++D      DH     I+  QE + + + +  D  E  CLKAIVLF  +  GLTD+  +E LQ+++QC L+DY +  +P +P+RFG+LLL +P LR + ++ +E  FF   VG T +  L++DM
Sbjct:  207 DNICEFAARLLFSAIEWARNIPGFPELQITDQVGLLRMVWSELFVLNASQCHMPLHVAPLLVAXGLHASPLAADRXVAFMDH-----IRVFQEQVEKLKALQVDAAEXACLKAIVLFSTDPPGLTDITLIEQLQEKSQCALDDYCKIHHPTKPSRFGKLLLRLPSLRTVSSAVIEQLFFIRLVGKTPIETLIRDM 396

HSP 2 Score: 104.76 bits (260), Expect = 2.398e-24
Identity = 43/82 (52.44%), Postives = 57/82 (69.51%), Query Frame = 0 
Query:    9 DIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHER 90
            +I C VCGD+SSGKHYG ++C+GC  FFKR + RS  + C++    K  CP+D+ HRNQC+ CR KKC +  M K+AVQ  R
Sbjct:   72 EILCVVCGDKSSGKHYGQFTCEGCKSFFKRCVRRSLTFQCRS----KKSCPVDQHHRNQCQHCRFKKCLNMGMKKEAVQKGR 149
[Close]
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000011488 (supercontig:LSalAtl2s:LSalAtl2s794:281844:292908:-1 gene:EMLSAG00000011488 transcript:EMLSAT00000011488 description:"maker-LSalAtl2s794-snap-gene-2.22")

HSP 1 Score: 119.013 bits (297), Expect = 5.163e-30
Identity = 72/227 (31.72%), Postives = 116/227 (51.10%), Query Frame = 0 
Query:  277 APPMFPYPPPTSLSGLSPSIVPSWDTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFKPETTGLTDLHPVEMLQDQAQCILNDYVRN--------RYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDMY 495
              P F + P  +++ LS       ++L E + +LLF  V W K +  F   S  DQ +LL+E+W  LF+L  +QWAI  +        + +LML+ +       +L+    K M +++ + R  + D  E   LKA++LF PE   L + H VE LQDQ   +L +Y  +        +Y     RFG+LLLA   +  I +  VE+ FF+ T+G  S++R++ D +
Sbjct:  139 TTPSFQFYPSPTITLLSE------NSLHEISVKLLFTVVHWAKSVPSFVEFSVNDQNVLLREAWSRLFILGTAQWAILIN--------EEKLMLNCEEKSKDHTNLLFHHAKKMTKIVQKIRDQNLDYNEYTILKALILFSPEGNNLIESHQVEKLQDQTLIMLEEYCSHNDNRVNKPKYTFNLRRFGKLLLAFSNIFQITSKDVESLFFQKTLGSISVDRIITDSF 351

HSP 2 Score: 58.5362 bits (140), Expect = 1.467e-9
Identity = 33/73 (45.21%), Postives = 40/73 (54.79%), Query Frame = 0 
Query:   46 YTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGPRKSKLQKELAANGITSPT-SHLSGRS 117
            Y CK  G     C ID   RNQC++CR KKC    M K+AVQ ER PR S ++    A   TS T S+L  +S
Sbjct:    4 YVCKGNGN----CTIDVARRNQCQSCRFKKCLMVKMKKEAVQQERTPRISCIK----ATQTTSYTFSNLKNKS 68
[Close]
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000009941 (supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-1 gene:EMLSAG00000009941 transcript:EMLSAT00000009941 description:"maker-LSalAtl2s649-snap-gene-4.11")

HSP 1 Score: 114.005 bits (284), Expect = 4.783e-28
Identity = 68/214 (31.78%), Postives = 100/214 (46.73%), Query Frame = 0 
Query:  284 PPPTSLSGLSP---SIVPSWDTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFKPETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDM 494
            P PTS  G  P   + +   + + E  ARLLF AV W + +  F  L   DQ+ LL+  W +LF                                               E + + + +  D  E  C+KAIVLF  +  GL D+  +E LQ+++QC L +Y R++YP QPTRFG+LLL +P LR + ++ +E  FF   VG T +  L++DM
Sbjct:  193 PYPTSRYGQMPMPTNGMIGIENICEFAARLLFSAVEWTRSIPGFPELQVTDQVALLRLVWSELF-----------------------------------------------EQVEKLKGLHVDSAEYVCMKAIVLFTTDAPGLCDMQVIEQLQEKSQCALEEYCRSQYPNQPTRFGKLLLRLPSLRTVSSTVIEQLFFVRLVGKTPIETLIRDM 359

HSP 2 Score: 109.768 bits (273), Expect = 1.692e-26
Identity = 46/84 (54.76%), Postives = 58/84 (69.05%), Query Frame = 0 
Query:    9 DIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGP 92
            DI C VCGD+SSGKHYG ++C+GC  FFKRS+ R+  Y C+        CP+D+ HRNQC+ CRLKKCF   M ++AVQ  R P
Sbjct:   80 DINCVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYQCRG----SKNCPVDQHHRNQCQHCRLKKCFKMGMRREAVQRGRVP 159
[Close]
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000001919 (supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1 gene:EMLSAG00000001919 transcript:EMLSAT00000001919 description:"augustus_masked-LSalAtl2s132-processed-gene-6.5")

HSP 1 Score: 107.457 bits (267), Expect = 2.306e-25
Identity = 53/176 (30.11%), Postives = 97/176 (55.11%), Query Frame = 0 
Query:  309 RLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFKPETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGD 484
            R++   + W K +  F  L  +DQ+ L++  W +L +  L+  +I  + G LL +    ++   ++      H+ D   + + E++ + +++  D  E GCL+AI+LF P+  GL+D+  VE L+++    L +Y R+ +  +P+RF +LLL +P LR I    +E+ FF   VGD
Sbjct:  252 RIIHQLIEWAKLVPHFSELKVEDQVTLIRGGWNELLVAGLAFXSIKLNDGILLGN--GTIVTRENAHEAGVGHIFD---RVLVELIAKMKEMQMDKAELGCLRAIILFNPDAKGLSDVTKVENLREKVYATLEEYTRSVHENEPSRFAKLLLRLPALRSIGLKCLEHLFFYKLVGD 422

HSP 2 Score: 105.145 bits (261), Expect = 1.283e-24
Identity = 41/79 (51.90%), Postives = 55/79 (69.62%), Query Frame = 0 
Query:   12 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHER 90
            C +CGDR+SGKHYG+YSC+GC GFFKR++ +   Y C+   +    C IDK  RN+C+ CR  KC D+ M ++AVQ ER
Sbjct:   91 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKELTYACRENRD----CVIDKRQRNRCQYCRYMKCLDTGMKREAVQEER 165
[Close]
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000007361 (supercontig:LSalAtl2s:LSalAtl2s418:374353:376789:1 gene:EMLSAG00000007361 transcript:EMLSAT00000007361 description:"maker-LSalAtl2s418-augustus-gene-3.13")

HSP 1 Score: 104.375 bits (259), Expect = 4.164e-24
Identity = 49/100 (49.00%), Postives = 63/100 (63.00%), Query Frame = 0 
Query:   12 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGP---RKSKLQKEL-AANGIT 107
            C VCGDR++GKHYG  SCDGC GFF+RS+ + RVY C+        C ++K  RN CR CRLK C  + M K AVQ+ER     RK    K++ +AN +T
Sbjct:  151 CAVCGDRATGKHYGAASCDGCKGFFRRSVRKERVYGCRQNRA----CIVNKDKRNNCRYCRLKMCIKAGMKKSAVQNERDRISCRKKTSAKDMNSANELT 246

HSP 2 Score: 88.1965 bits (217), Expect = 8.524e-19
Identity = 57/211 (27.01%), Postives = 103/211 (48.82%), Query Frame = 0 
Query:  287 TSLSGLSPSIVPSWDTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMS---DDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFKPETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDM 494
            T  + L+   + S + +  +    L + V W K +  F  LS  DQ+ LL+    +  L+ +++ ++  +L  +L      +++  +  + S   D  +  + ++ M E++  F++I+ D  E  CLKAIV F P   GL D+  ++ L+ Q    L DY+ +R      RFG +LL+I  L+ I    +E   F    G   ++ LLQ+M
Sbjct:  277 TEENVLANKQLASIEDIGHSMKEQLIVLVEWAKHIKAFCELSVDDQVRLLRAHSGEHLLMGVAKRSM--NLNGILLLGNDMIIVKDERKWNSESQDAAVRSIGVRVMNELVDTFKRINIDDAELACLKAIVFFDPHVRGLHDVEQIKKLRSQIHTNLEDYINDRLYESRGRFGEILLSIQSLQAITWQMIEQISFAKNFG-VGVDSLLQEM 484
[Close]
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000007233 (supercontig:LSalAtl2s:LSalAtl2s405:178614:197434:1 gene:EMLSAG00000007233 transcript:EMLSAT00000007233 description:"maker-LSalAtl2s405-snap-gene-2.21")

HSP 1 Score: 102.834 bits (255), Expect = 4.448e-24
Identity = 70/210 (33.33%), Postives = 103/210 (49.05%), Query Frame = 0 
Query:  296 IVPSWDTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFKPETTGLTDLHPVEMLQDQAQCILNDYVRNRYPR--------QPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDMYNA 497
            I P  ++  E  ARLLFMAV                   LL+ESW +LFLL   QW++P +   L S    +L  S    +          +  +  ++ R+++ + +  E  C+KAI+LFKPET GL D   VE LQDQA  +LN++V    P           +RFGRLLL +  LR   +  +E  +F   +G+  M +LL DM+ +
Sbjct:  221 IYPLTESNHEIAARLLFMAVT------------------LLEESWSELFLLCAIQWSMPLEKPSLFSLPNPELYPSEIVNY----------VDVLTGILGRYKRTAVNPAEFACMKAILLFKPETQGLKDHALVENLQDQALVMLNNHVETTLPGGGGGRGQLSSSRFGRLLLLLSNLRQSNSFKIEKLYFDRIIGNAKMEKLLCDMFQS 402

HSP 2 Score: 69.3218 bits (168), Expect = 6.058e-13
Identity = 68/250 (27.20%), Postives = 105/250 (42.00%), Query Frame = 0 
Query:   45 VYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGPRKSKLQKELAANGITSPTSHLSGRSHHHHHHGHPGGPPNSFSGTTKVPPFFFPTAAAAAAVAHHLFPLPPPPPPVSVSRHLA--LGSAHLPSP-PALFH---------HHHHHHSSSASSSPCGRSSEGAVNSSSESDGKLLSPTSAKLTEVSRELIAPSPVMLGRGTTSLLSIIADRHNDLWGGKGPLSEGLALPAPPMFP 282
            +Y C+A     G C IDK HRNQC+ACRL+KC    MNKDAVQ+ER PR +             P S  S  SH                 +  V  F  P +     + H      P PPP+   +++    GS++L SP P + H         +     S+++ ++P   S+    + SS  D K+  P +    E++  L+  +  +L    + L  + A +    W          +LP P ++P
Sbjct:   62 IYRCQAG---TGMCVIDKAHRNQCQACRLRKCLHMGMNKDAVQNERQPRNT---------ATLRPESFSSMDSHRFLRE-----------ASVAVGAFGIPISPFTIPLHHQ-----PNPPPLHQPQNIIPDFGSSNLGSPIPPMPHLSMKTPPLDNKLKQRSTNSITTPTN-SNNNVFDHSSIPDLKIY-PLTESNHEIAARLLFMAVTLLEESWSELFLLCAIQ----WSMPLEKPSLFSLPNPELYP 277
[Close]
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53")

HSP 1 Score: 97.8265 bits (242), Expect = 1.028e-21
Identity = 39/81 (48.15%), Postives = 53/81 (65.43%), Query Frame = 0 
Query:   12 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGP 92
            C +C DR++G HYGI +C+GC GFFKR++   R+YTC A GE    C I+K  RN+C+ CR +KC    M   AV+ +R P
Sbjct:  283 CMICEDRATGLHYGIITCEGCKGFFKRTVQNKRIYTCVADGE----CEINKAQRNRCQYCRFQKCLQKGMVLAAVREDRMP 359
[Close]
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|1352800265|sp|O16845.2|TLL_DROVI (RecName: Full=Protein tailless; AltName: Full=Nuclear receptor subfamily 2 group E member 2)

HSP 1 Score: 255.758 bits (652), Expect = 1.081e-78
Identity = 166/519 (31.98%), Postives = 237/519 (45.66%), Query Frame = 0 
Query:    7 LLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGPRKSKLQKELAANGITSPTSHLSGRSHHHHHHGHPGGPPNSFSGTTKVPPFFFPTAAAAAAVAHHLFPLPPPPPPVSVSRHLALGSAHLPSPPALFHHHHHHHSSSASSSPCGRSSEGAVNSSSESDGKLLSPTSAKLTEVSRELIAPSPVMLGRGTTSLLSIIADRHNDLWGGKGPLSEGLALPAPPMFPYPPPTSLSGLSPSIVPSWDTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFK-----------------------------PETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDMYN 496
            L  +PCKVC D SSGKHYGIY+CDGC+GFFKRSI RSR Y CK+Q +  G C +DKTHRNQCRACRL+KCF+  MNKDAVQHERGPR S L++ +A                                         +  A   AA       +P  PP + ++     G   LP P       HHH + SA+  P                     P SA + ++S   +   PV  G             H+  +         LA  A P  P PP           + + + ++ET A  LF  V W+K +  F  L   DQLLLL+ESWK+ F+L ++Q+ +P +   LL       +  S++       +V  E+   Q+++ +   ++ D TE  CL+AI LF+                              E+ GL +   V  + + A+  L++Y+   +P QP RF  LL  + L+  + + T+E  FFR T+GD ++ RL+ DMY+
Sbjct:   29 LYHVPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQ--GLCVVDKTHRNQCRACRLRKCFEVGMNKDAVQHERGPRNSTLRRHMA----------------------------------------MYKDAMMGAA------EMPQIPPEILMNTAALTGFPGLPMPMPGVQRSHHHAALSAAFQP---------------------PPSAAVLDLSVPRVPHHPVHQG-------------HHGFFSPTAAYMNALATRALP--PTPP-----------LMAAEHIKETAAEHLFKNVNWIKSVRAFTELPMPDQLLLLEESWKEFFILAMAQYLMPMNFAQLL------FVYESENANREIVTIVAREVHAFQDVLNQLCHLNIDSTEYECLRAISLFRKSPPAASSTEDLANSSILTGSGSPNSSASAESRGLLESSKVAAMHNDARNALHNYISRTHPNQPLRFQTLLGVVTLMHKVSSFTIEELFFRKTIGDITIVRLISDMYS 446
[Close]
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|6094488|sp|Q91379.1|NR2E1_CHICK (RecName: Full=Nuclear receptor subfamily 2 group E member 1; AltName: Full=Nuclear receptor TLX; AltName: Full=Protein tailless homolog; Short=Tll)

HSP 1 Score: 175.252 bits (443), Expect = 1.087e-48
Identity = 85/155 (54.84%), Postives = 102/155 (65.81%), Query Frame = 0 
Query:    2 GTGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGPRKSKLQKELAANGITSPTSHLSGRSHHHHHHGHPGGP------PNSFSGTTKVPPFFFPTAAAA 150
            G+  R+LDIPCKVCGDRSSGKHYG+Y+CDGCSGFFKRSI R+R Y CK+  +  G CP+DKTHRNQCRACRLKKC +  MNKDAVQHERGPR S ++K++A          L  R H     G P  P      P  F+  +++ P     AA A
Sbjct:    6 GSTSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQ--GGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVA----------LYFRGHKEESSGAPHFPATALPAPAFFTAVSQLEPHGLELAAVA 148

HSP 2 Score: 173.326 bits (438), Expect = 4.784e-48
Identity = 96/242 (39.67%), Postives = 138/242 (57.02%), Query Frame = 0 
Query:  272 GLALPAP---------PMFPYPPPTSLSGLSPSIVPSWDTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFKP-------ETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDMYNA 497
            GLA P P         PM+ Y   T             +++ E+ ARLLFM+++W K +  F TLS +DQL+LL+++W++LF+L ++QWAIP D   LL+       ++ D+T     + +  EI+ +QE++ RFRQ+  D TE  CLK IV FK        E     +   +  LQD+AQ  LN Y+  RYP QP RFG+LLL +P LR I  ST+E  FF+ T+G+  + RLL DMY +
Sbjct:  158 GLAQPTPKYPHEVNGTPMYLYEVAT-------------ESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSG----MNGDNTDSQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDMYKS 382
[Close]
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|6094490|sp|P70052.1|NR2E1_XENLA (RecName: Full=Nuclear receptor subfamily 2 group E member 1; AltName: Full=Nuclear receptor TLX; AltName: Full=Protein tailless homolog; Short=Tll; Short=xTLL)

HSP 1 Score: 174.096 bits (440), Expect = 2.471e-48
Identity = 82/146 (56.16%), Postives = 96/146 (65.75%), Query Frame = 0 
Query:    2 GTGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGPRKSKLQKELAANGITSPTSHLSGRSHHHHHHGHPGGPPNSFSGTTKVPPFFFPTA 147
            G+  R+LDIPCKVCGDRSSGKHYG+Y+CDGCSGFFKRSI R+R Y CK+  +  G CP+DKTHRNQCRACRLKKC +  MNKDAVQHERGPR S ++K++A                +   H    G    FS T    P FF T 
Sbjct:    6 GSTSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRSYVCKSGNQ--GGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVAL---------------YFRGHKEVNGSTQHFSSTALPTPTFFTTV 134

HSP 2 Score: 167.162 bits (422), Expect = 1.124e-45
Identity = 84/205 (40.98%), Postives = 129/205 (62.93%), Query Frame = 0 
Query:  301 DTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFKP--------ETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDMYNA 497
            +++ E+ ARLLFM+++W K +  F TLS +DQL+LL+++W++LF+L ++QWAIP D   LL+       +++++T     + +  EI+ +Q+++ RFRQ+  D TE  CLK IV FK         E     +   +  LQD+AQ  LN Y+  RYP QP RFG+LLL +P LR I  ST+E  FF+ T+G+  + R+L DMY +
Sbjct:  183 ESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDASTLLAVSG----MNNENTESPKLNKIISEIQALQDVVSRFRQLRLDATEFACLKCIVTFKAGVSTHSGSELRNFRNAAAISALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSINPSTIEEVFFKKTIGNVPITRVLSDMYKS 383
[Close]
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|6094489|sp|Q64104.1|NR2E1_MOUSE (RecName: Full=Nuclear receptor subfamily 2 group E member 1; AltName: Full=Nuclear receptor TLX; AltName: Full=Protein tailless homolog; Short=Tll; Short=mTll)

HSP 1 Score: 172.94 bits (437), Expect = 6.595e-48
Identity = 88/171 (51.46%), Postives = 106/171 (61.99%), Query Frame = 0 
Query:    2 GTGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGPRKSKLQKELAANGITSPTSHLSGRSHHHHHHGHPGGP------PNSFSGTTKVPPFFFPTAAAAAAVAHH-LFPLPPPPP 165
            G+  R+LDIPCKVCGDRSSGKHYG+Y+CDGCSGFFKRSI R+R Y CK+  +  G CP+DKTHRNQCRACRLKKC +  MNKDAVQHERGPR S ++K++A          L  R H   +      P      P  F+  T++ P     AA +A      L  L  P P
Sbjct:    6 GSTSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQ--GGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVA----------LYFRGHKEDNGAAAHFPSTALPAPAFFTAVTQLEPHGLELAAVSATPERQTLVSLAQPTP 164

HSP 2 Score: 172.555 bits (436), Expect = 9.092e-48
Identity = 87/204 (42.65%), Postives = 129/204 (63.24%), Query Frame = 0 
Query:  301 DTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFKP-------ETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDMYNA 497
            +++ E+ ARLLFM+++W K +  F TLS +DQL+LL+++W++LF+L ++QWAIP D   LL+       +++D+T     + +  EI+ +QE++ RFRQ+  D TE  CLK IV FK        E     +   +  LQD+AQ  LN Y+  RYP QP RFG+LLL +P LR I  ST+E  FF+ T+G+  + RLL DMY +
Sbjct:  183 ESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSG----MNTDNTDSQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDMYKS 382
[Close]
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|9910804|sp|Q9Y466.1|NR2E1_HUMAN (RecName: Full=Nuclear receptor subfamily 2 group E member 1; AltName: Full=Nuclear receptor TLX; AltName: Full=Protein tailless homolog; Short=Tll; Short=hTll)

HSP 1 Score: 172.17 bits (435), Expect = 1.320e-47
Identity = 87/204 (42.65%), Postives = 128/204 (62.75%), Query Frame = 0 
Query:  301 DTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFKP-------ETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDMYNA 497
            +++ E+ ARLLFM+++W K +  F TLS +DQL+LL+++W++LF+L ++QWAIP D   LL+       ++ D+T     + +  EI+ +QE++ RFRQ+  D TE  CLK IV FK        E     +   +  LQD+AQ  LN Y+  RYP QP RFG+LLL +P LR I  ST+E  FF+ T+G+  + RLL DMY +
Sbjct:  183 ESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSG----MNGDNTDSQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDMYKS 382

HSP 2 Score: 171.785 bits (434), Expect = 1.956e-47
Identity = 87/171 (50.88%), Postives = 105/171 (61.40%), Query Frame = 0 
Query:    2 GTGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGPRKSKLQKELAANGITSPTSHLSGRSHHHHHHGHPGGP------PNSFSGTTKVPPFFFPTAAAAAAVAHH-LFPLPPPPP 165
            G+  R+LDIPCKVCGDRSSGKHYG+Y+CDGCSGFFKRSI R+R Y CK+  +  G CP+DKTHRNQCRACRLKKC +  MNKDAVQHERGPR S ++K++A          L  R H   +      P      P  F+  T++ P     AA +       L  L  P P
Sbjct:    6 GSTSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQ--GGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVA----------LYFRGHKEENGAAAHFPSAALPAPAFFTAVTQLEPHGLELAAVSTTPERQTLVSLAQPTP 164
[Close]
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|9910805|sp|Q9YGL3.1|NR2E1_ORYLA (RecName: Full=Nuclear receptor subfamily 2 group E member 1; AltName: Full=Nuclear receptor TLX; AltName: Full=Protein tailless homolog; Short=Tll)

HSP 1 Score: 171.785 bits (434), Expect = 2.221e-47
Identity = 82/138 (59.42%), Postives = 97/138 (70.29%), Query Frame = 0 
Query:    6 RLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGPRKSKLQKELAANGITSPTSHLSGRSHHHHHHGHPGGPPNSFSGTTKVPPFF 143
            R+LDIPCKVCGDRSSGKHYG+Y+CDGCSGFFKRSI R+R+Y CK+  +  G CP+DKTHRNQCRACRLKKC +  MNKDAVQHERGPR S ++K++A          L  R H   +      P +S  G    PPFF
Sbjct:   21 RILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRIYLCKSGSQ--GGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVA----------LYFRGHKEVNGSSTHFPGSSLPG----PPFF 142

HSP 2 Score: 166.007 bits (419), Expect = 3.658e-45
Identity = 93/233 (39.91%), Postives = 137/233 (58.80%), Query Frame = 0 
Query:  272 GLALPAPPMFPYPPPTSLSGLSPSIVPSWDTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFKP-------ETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDMYNA 497
            GLA P P    YP   S + +    V + +++ E+ ARLLFM+++W K +  F TL   DQL+LL+++W++LF+L ++QWAIP D   LL+       L+S++      + +  EI+ +QE++ RFRQ+  D TE  CLK IV FK        E     +   +  LQD+AQ  LN Y+  RYP QP RFG+LLL +P LR +  ST+E  FF+  +G+  + RLL DMY +
Sbjct:  169 GLAQPTPK---YPHEVSGTPMYLYEVAT-ESVCESAARLLFMSIKWAKSVPAFSTLPLSDQLILLEDAWRELFVLGIAQWAIPVDSTTLLAVSG----LNSENMEAQRMNKIMAEIQALQEVVTRFRQMRLDATEFACLKCIVTFKAVPTQGSAELRAFRNASAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSVSPSTIEEVFFKKNIGNVPITRLLSDMYKS 393
[Close]
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|8928275|sp|Q9Y5X4.1|NR2E3_HUMAN (RecName: Full=Photoreceptor-specific nuclear receptor; AltName: Full=Nuclear receptor subfamily 2 group E member 3; AltName: Full=Retina-specific nuclear receptor)

HSP 1 Score: 172.17 bits (435), Expect = 2.298e-47
Identity = 89/196 (45.41%), Postives = 125/196 (63.78%), Query Frame = 0 
Query:  301 DTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFKPETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDMYN 496
            D++ ET+ARLLFMAV+W K L  F +L  +DQ++LL+E+W +LFLL   QW++P D   LL+  +      +         L  ME + +QE + RFR ++ D TE  C+KA+VLFKPET GL D   VE LQDQ+Q +L+ + +  +P QP RFG+LLL +P LR I    +E  FFR T+G+T M +LL DM+ 
Sbjct:  218 DSIHETSARLLFMAVKWAKNLPVFSSLPFRDQVILLEEAWSELFLLGAIQWSLPLDSCPLLAPPEASAAGGAQGRLT----LASMETRVLQETISRFRALAVDPTEFACMKALVLFKPETRGLKDPEHVEALQDQSQVMLSQHSKAHHPSQPVRFGKLLLLLPSLRFITAERIELLFFRKTIGNTPMEKLLCDMFK 409

HSP 2 Score: 130.568 bits (327), Expect = 3.662e-32
Identity = 54/86 (62.79%), Postives = 67/86 (77.91%), Query Frame = 0 
Query:   10 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGPRKS 95
            + C+VCGD SSGKHYGIY+C+GCSGFFKRS+ R  +Y C+      G CP+DK HRNQC+ACRLKKC  + MN+DAVQ+ER PR +
Sbjct:   45 LQCRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGA---GMCPVDKAHRNQCQACRLKKCLQAGMNQDAVQNERQPRST 127
[Close]
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|263506139|sp|Q9TTF0.2|NR2E3_BOVIN (RecName: Full=Photoreceptor-specific nuclear receptor; AltName: Full=Nuclear receptor subfamily 2 group E member 3; AltName: Full=Retina-specific nuclear receptor)

HSP 1 Score: 168.318 bits (425), Expect = 7.326e-46
Identity = 90/196 (45.92%), Postives = 125/196 (63.78%), Query Frame = 0 
Query:  301 DTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFKPETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDMYN 496
            D++ ET+ARLLFMAV+W K L  F  L  +DQ++LL+E+W +LFLL   QW++P D   LL+  +     SS    +    L   E + +QE + RFR ++ D TE  C+KA+VLFKPET GL D   VE LQDQ+Q +L+ + +  +P Q  RFG+LLL +P LR I +  VE  FFR T+G+T M +LL DM+ 
Sbjct:  219 DSIHETSARLLFMAVKWAKNLPVFSNLPFRDQVILLEEAWSELFLLGAIQWSLPLDNCPLLALPEASAGGSSQGRLV----LASAETRILQETISRFRALAVDPTEFACMKALVLFKPETRGLKDPEHVEALQDQSQVMLSQHSKAHHPSQLVRFGKLLLLLPSLRFISSERVELLFFRKTIGNTPMEKLLCDMFK 410

HSP 2 Score: 130.568 bits (327), Expect = 3.684e-32
Identity = 56/100 (56.00%), Postives = 71/100 (71.00%), Query Frame = 0 
Query:   10 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGPRKSKLQKELAANGITSP 109
            + C+VCGD SSGKHYGIY+C+GCSGFFKRS+ R  +Y C+      G CP+DK HRNQC+ACRLKKC  + MN+DAVQ+ER PR +   +  +    T P
Sbjct:   37 LQCRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGA---GMCPVDKAHRNQCQACRLKKCLQAGMNQDAVQNERQPRSTAQVRMDSVESETEP 133
[Close]
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|135913|sp|P18102.1|TLL_DROME (RecName: Full=Protein tailless; AltName: Full=Nuclear receptor subfamily 2 group E member 2)

HSP 1 Score: 162.925 bits (411), Expect = 1.526e-43
Identity = 94/214 (43.93%), Postives = 114/214 (53.27%), Query Frame = 0 
Query:    7 LLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGPRKSKLQKELAAN----------------------------GITSPTSHLSGRSHHHHHHGHPGGPPNSFSGTT-----KVP---------PFFFPTAAAAAAVAHHLFPLPPPPPPVSVSRHLALGSA 178
            L  +PCKVC D SSGKHYGIY+CDGC+GFFKRSI RSR Y CK+Q +  G C +DKTHRNQCRACRL+KCF+  MNKDAVQHERGPR S L++ +A                              G+  P   L  R+ HH  H     PP S +        +VP          FF PTAA   A+A       PP PP+  + H+   +A
Sbjct:   29 LYHVPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQ--GLCVVDKTHRNQCRACRLRKCFEVGMNKDAVQHERGPRNSTLRRHMAMYKDAMMGAGEMPQIPAEILMNTAALTGFPGVPMPMPGLPQRAGHHPAHMAAFQPPPSAAAVLDLSVPRVPHHPVHQGHHGFFSPTAAYMNALATRAL---PPTPPLMAAEHIKETAA 237

HSP 2 Score: 126.331 bits (316), Expect = 2.429e-30
Identity = 68/225 (30.22%), Postives = 116/225 (51.56%), Query Frame = 0 
Query:  301 DTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFK-----------------------------PETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDMYN 496
            + ++ET A  LF  V W+K +  F  L   DQLLLL+ESWK+ F+L ++Q+ +P +   LL   +++   +++   M    +V  E+   QE++ +   ++ D TE  CL+AI LF+                              E+ GL +   V  + + A+  L++Y++  +P QP RF  LL  + L+  + + T+E  FFR T+GD ++ RL+ DMY+
Sbjct:  230 EHIKETAAEHLFKNVNWIKSVRAFTELPMPDQLLLLEESWKEFFILAMAQYLMPMNFAQLLFVYESE---NANREIMG---MVTREVHAFQEVLNQLCHLNIDSTEYECLRAISLFRKSPPSASSTEDLANSSILTGSGSPNSSASAESRGLLESGKVAAMHNDARSALHNYIQRTHPSQPMRFQTLLGVVQLMHKVSSFTIEELFFRKTIGDITIVRLISDMYS 448
[Close]
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|10720145|sp|Q9QXZ7.1|NR2E3_MOUSE (RecName: Full=Photoreceptor-specific nuclear receptor; AltName: Full=Nuclear receptor subfamily 2 group E member 3; AltName: Full=Retina-specific nuclear receptor)

HSP 1 Score: 160.999 bits (406), Expect = 2.385e-43
Identity = 93/204 (45.59%), Postives = 127/204 (62.25%), Query Frame = 0 
Query:  299 SWDTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLS------SRQTQLMLSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFKPETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDMYN 496
            S D + ET+ARLLFMAV+W K L  F  L  +DQ++LL+E+W +LFLL   QW++P D   LL+      S Q +L L+S             E + +QE + RFR ++ D TE  CLKA+VLFKPET GL D   VE LQDQ+Q +L+ + +  +P QP RFG+LLL +P LR +    +E  FFR T+G+T M +LL DM+ 
Sbjct:  203 SLDGIHETSARLLFMAVKWAKNLPVFSNLPFRDQVILLEEAWNELFLLGAIQWSLPLDSCPLLAPPEASGSSQGRLALAS------------AETRFLQETISRFRALAVDPTEFACLKALVLFKPETRGLKDPEHVEALQDQSQVMLSQHSKAHHPSQPVRFGKLLLLLPSLRFLTAERIELLFFRKTIGNTPMEKLLCDMFK 394

HSP 2 Score: 130.568 bits (327), Expect = 2.645e-32
Identity = 54/84 (64.29%), Postives = 66/84 (78.57%), Query Frame = 0 
Query:   10 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGPR 93
            + C+VCGD SSGKHYGIY+C+GCSGFFKRS+ R  +Y C+      G CP+DK HRNQC+ACRLKKC  + MN+DAVQ+ER PR
Sbjct:   38 LQCRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGA---GMCPVDKAHRNQCQACRLKKCLQAGMNQDAVQNERQPR 118
[Close]
BLAST of orphan nuclear receptor vs. nr
Match: gi|1069703215|ref|XP_018310210.1| (PREDICTED: nuclear receptor subfamily 2 group E member 1-like [Trachymyrmex zeteki])

HSP 1 Score: 400.208 bits (1027), Expect = 2.019e-132
Identity = 230/501 (45.91%), Postives = 286/501 (57.09%), Query Frame = 0 
Query:    1 MGTGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGPRKSKLQKELAANGITSPTSHLSGRSHHHHHHGHPGGPPNSFSGTTKVPPFFFPTAAAAAAVAHHLFPLPPPPPPVSVSRHLALGSAHLPSPPALFHHHHHHHSSSASSSPCGRSSEGAVNSSSESDGKLLSP-TSAKLTEVSREL-IAPSPVMLGRGTTSLLSIIADRHNDLWGGK-GPLSEGLALPAPPMFPYPPPTSLS--GLSPSIVPSWDTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFKPETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDMYN 496
            MGTGDRLLDI C VCGDRSSGKHYGIYSCDGCSGFFKRSIH +R Y CKAQG  KGRCPIDKTHRNQCRACRL KCF++ MNKDAVQHERGPRK              P  H    S   H    P          T++ P      +A    +  L P   PP  +S  R L       P P                  P     +    S S     L  P T+  L + +  + +AP P +L      +L    +    +W  +  P +E       PM      TS S  G   S  P+W+ LQETTARLLFMAVRWV+CL PFQT+S  DQLLLL+ SW  LFLLHL+QW++ WD+  LL   Q +      S   +DD+  + E+  +Q ++CRFRQ+SPD  ECGC+KA+ LF PET GL  + P+E+LQDQAQ IL DY R+RYP+QP+R GRL++ +  LR + + TVE  FF +T+G+  ++RLL DMY 
Sbjct:    1 MGTGDRLLDILCDVCGDRSSGKHYGIYSCDGCSGFFKRSIHSNREYICKAQGAKKGRCPIDKTHRNQCRACRLAKCFEANMNKDAVQHERGPRK--------------PKPHAIISSEKQHQQQSPI--------VTQLSPH-----SATPVHSDRLRPALAPPYVLSPHRRLRCDQRFTPYP-----------------RPMALVQKPPEESPSPVPLILPHPRTTTTLYQAATTVSLAPQPPLL-----QILMSAEECQELVWNARLQPTAEY------PMEQIETETSRSPTGTVQSFSPTWEMLQETTARLLFMAVRWVRCLPPFQTISKDDQLLLLERSWTQLFLLHLAQWSVSWDITALLEDEQVR------SRLPTDDNPTNQELVLIQAIICRFRQLSPDFGECGCMKAVALFTPETVGLHAVQPIEILQDQAQRILVDYTRSRYPQQPSRIGRLMILVGYLRCVSSKTVERLFFHETIGEIPISRLLVDMYQ 440
[Close]
BLAST of orphan nuclear receptor vs. nr
Match: gi|795038935|ref|XP_011866111.1| (PREDICTED: nuclear receptor subfamily 2 group E member 1 isoform X1 [Vollenhovia emeryi])

HSP 1 Score: 400.979 bits (1029), Expect = 2.897e-132
Identity = 233/511 (45.60%), Postives = 286/511 (55.97%), Query Frame = 0 
Query:    1 MGTGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGPRKSKLQKELAANGITSPTSHLSGRSHHHHHHGHPGGPPNSFSGTTKVPPFFFPTAAAAAAVAHHLFPLPPPPPPVSVSRHLALGSAHLPSPPALFHHHHHHHSSSASSSPCGRSSEGAVNSSSESDGKLLSP-TSAKLTEVSREL-IAPSPVMLG----------RGTTSLLSIIADRHNDLWGGK-GPLSEGLALPAPPMFPYPPPTSLS--GLSPSIVPSWDTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFKPETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDMYN 496
            MGTGDRLLDI C VCGDRSSGKHYGIYSCDGCSGFFKRSIH +R Y CKAQG  KGRCPIDKTHRNQCRACRL KCF++ MNKDAVQHERGPRK              P  H    S   H    P          T++ P      +AA+     L P   PP  +S  R L       P P                  P     +    S S     L  P T+  L + +  + +AP P +L           R     ++    R   +W  +  P +E       PM      TS S  G   S  P+W+ LQETTARLLFMAVRWV+CL PFQT+S  DQLLLL+ SW  LFLLHL+QW++ WD+  LL   Q +      S   +DD   + E+  +Q ++CRFRQ+SPD  ECGC+KA+ LF PET GL  + P+EMLQDQAQ IL DY R+RYP+QP R GRL++ +  LR + + TVE  FF +T+G+  ++RLL DMY 
Sbjct:    1 MGTGDRLLDILCDVCGDRSSGKHYGIYSCDGCSGFFKRSIHSNREYICKAQGAKKGRCPIDKTHRNQCRACRLAKCFEANMNKDAVQHERGPRK--------------PKPHAIISSEKQHQQQSPI--------VTQLSPH-----SAASVHNDRLRPALAPPYILSPHRRLRCDQRFTPYP-----------------RPMALVQKPPEESPSPVPLILPHPRTTTTLYQAATTVSLAPQPPLLQILMSAEECQFRALVVQITASLCRKELVWNARLQPTAEY------PMEQMETETSRSPTGTVQSFSPTWEMLQETTARLLFMAVRWVRCLPPFQTISKDDQLLLLERSWTQLFLLHLAQWSVSWDITALLEDEQVR------SRLPTDDSPTNQELVLIQAIICRFRQLSPDFGECGCMKAVALFTPETVGLHAVQPIEMLQDQAQRILVDYTRSRYPQQPGRIGRLMILVGYLRCVSSKTVERLFFHETIGEIPISRLLVDMYQ 455
[Close]
BLAST of orphan nuclear receptor vs. nr
Match: gi|1153826632|ref|XP_020289648.1| (nuclear receptor subfamily 2 group E member 1-like isoform X1 [Pseudomyrmex gracilis])

HSP 1 Score: 399.823 bits (1026), Expect = 2.951e-132
Identity = 223/501 (44.51%), Postives = 282/501 (56.29%), Query Frame = 0 
Query:    1 MGTGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGPRKSKLQKELAANGITSPTSHLSGRSHHHHHHGHPGGPPNSFSGTTKVPPFFFPTAAAAAAVAHHLFPLPPPPPPVSVSRHLALGSAH----LPSPPALFHHHHHHHSSSASSS-PCGRSSEGAVNSSSESDGKLLSPTSAKLTEVSRELIAPSPVMLGRGTTSLLSIIADRHNDLWGGKGPLSEGLALPAPPMFPYPPPTSLSGLSPSIVPSWDTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFKPETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDMYN 496
            MGTGDRLLDI C VCGDRSSGKHYGIYSCDGCSGFFKRSIH +R Y CKAQG  KGRCPIDKTHRNQCRACRL KCF++ MNKDAVQHERGPRK K            P + +S + H       P   P+S                  +A  H+    PP  PP  +S H  L         P P AL         S      P  R++     +++                     + P P +L      +L    +    +W  +   +   ++          PT   G   S  P+W+ LQETTARLLFMAVRWV+CL PFQT+S  DQLLLL+ SW  LFLLHL+QW++ WD+  LL   Q +  L +D      D+  + E+  +Q ++CRFRQ+SPD  ECGC+KA+ LF PET GL  + P+E+LQDQAQ IL DY R+RYP+QP R GRL++ +  LR + + TVE  FF +T+G+  ++RLL DMY 
Sbjct:    1 MGTGDRLLDILCDVCGDRSSGKHYGIYSCDGCSGFFKRSIHSNREYICKAQGAKKGRCPIDKTHRNQCRACRLAKCFEANMNKDAVQHERGPRKPK------------PHAIISEKQHQQQSQIVPQLTPHS------------------SAPVHNDRLRPPLAPPYVLSAHRRLRCDQRFTPYPRPMALVQKPPEESPSPVPLVLPHPRTTTTLYQAAATVS------------------LTPQPPLL-----QILMSAEECQELVWNARLQPTTEYSMEQMETETSQSPT---GTVQSFSPTWEMLQETTARLLFMAVRWVRCLPPFQTISKDDQLLLLERSWTQLFLLHLAQWSVSWDITALLEDEQVRARLPTD------DNPTNQELVLIQAIICRFRQLSPDFGECGCMKAVALFTPETVGLHAVQPIEILQDQAQRILVDYTRSRYPQQPGRIGRLMILVGYLRCVSSKTVERLFFHETIGEIPISRLLVDMYQ 439
[Close]
BLAST of orphan nuclear receptor vs. nr
Match: gi|780697840|ref|XP_011701242.1| (PREDICTED: nuclear receptor subfamily 2 group E member 1 isoform X2 [Wasmannia auropunctata])

HSP 1 Score: 398.667 bits (1023), Expect = 1.339e-131
Identity = 236/512 (46.09%), Postives = 291/512 (56.84%), Query Frame = 0 
Query:    1 MGTGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGPRKSKLQKELAANGITSPTSHLSGRSHHHHHHGHPGGPPNSFSGTTKVPPFFFPTAAAAAAVAHHLFPLPPPPPPVSVSRHLALGSAHLPSPPALFHHHHHHHSSSASSSPCGRSSEGAVNSSSESDGKLLSP---TSAKLTEVSREL-IAPSPVMLGR-------GTTSLLSIIAD--RHNDLWGGK-GPLSEGLALPAPPMFPYPPPTSLS--GLSPSIVPSWDTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFKPETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDMYN 496
            MGTGDRLLDI C VCGDRSSGKHYGIYSCDGCSGFFKRSIH +R Y CKAQG  KGRCPIDKTHRNQCRACRL KCF++ MNKD VQHERGPRK              P  H    S   H    P          T++ P      +AA      L P   PP  +S  R L       P P  +         +    SP            S S   L+ P   T+  L + +  + +AP P +L          T +L+ I A   R   +W  +  P +E       PM      TS S  G   S  P+W+ LQETTARLLFMAVRWV+CL PFQT+S  DQLLLL+ SW  LFLLHL+QW+I WD+  LL   Q +      S   +DD+  + E+  +Q ++CRFRQ+SPD  ECGC+KA+ LF PET GL  + P+E+LQDQAQ IL DY R+RYP+QP R GRL++ +  LR + + TVE  FF +T+G+  ++RLL DMY 
Sbjct:    1 MGTGDRLLDILCDVCGDRSSGKHYGIYSCDGCSGFFKRSIHSNREYICKAQGAKKGRCPIDKTHRNQCRACRLAKCFEANMNKD-VQHERGPRK--------------PKPHAIISSEKQHQQQSPI--------VTQLSPH-----SAAPVHNDRLRPALAPPYVLSPHRRLRCDQRFTPYPRPM---------ALVQKSP----------EESPSPVPLILPHPRTTTTLYQAATTVSLAPQPPLLQILMSAEECQTRALVQITASLCRKELVWNARLQPTAEY------PMEQLETETSRSPTGTVQSFSPTWEMLQETTARLLFMAVRWVRCLPPFQTISKDDQLLLLERSWTQLFLLHLAQWSISWDITALLEDEQVR------SRLPTDDNPTNQELVLIQAIICRFRQLSPDFGECGCMKAVALFTPETVGLHAIQPIEILQDQAQRILVDYTRSRYPQQPGRIGRLMILVGYLRCVSSKTVERLFFHETIGEIPISRLLVDMYQ 453
[Close]
BLAST of orphan nuclear receptor vs. nr
Match: gi|332025033|gb|EGI65220.1| (Photoreceptor-specific nuclear receptor, partial [Acromyrmex echinatior])

HSP 1 Score: 395.201 bits (1014), Expect = 1.729e-130
Identity = 227/498 (45.58%), Postives = 284/498 (57.03%), Query Frame = 0 
Query:    4 GDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRSRVYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDSAMNKDAVQHERGPRKSKLQKELAANGITSPTSHLSGRSHHHHHHGHPGGPPNSFSGTTKVPPFFFPTAAAAAAVAHHLFPLPPPPPPVSVSRHLALGSAHLPSPPALFHHHHHHHSSSASSSPCGRSSEGAVNSSSESDGKLLSP-TSAKLTEVSREL-IAPSPVMLGRGTTSLLSIIADRHNDLWGGK-GPLSEGLALPAPPMFPYPPPTSLS--GLSPSIVPSWDTLQETTARLLFMAVRWVKCLAPFQTLSSKDQLLLLQESWKDLFLLHLSQWAIPWDLGHLLSSRQTQLMLSSDSTFMSDDHLVDMEIKTMQEMMCRFRQISPDGTECGCLKAIVLFKPETTGLTDLHPVEMLQDQAQCILNDYVRNRYPRQPTRFGRLLLAIPLLRMIRTSTVENFFFRDTVGDTSMNRLLQDMYN 496
            GDRLLDI C VCGDRSSGKHYGIYSCDGCSGFFKRSIH +R Y CKAQG  KGRCPIDKTHRNQCRACRL KCF++ MNKDAVQHERGPRK              P  H    S   H    P          T++ P      +A +  +  L P   PP  +S  R L       P P                  P     +    S S     L  P T+  L + +  + +AP P +L      +L    +    +W  +  P +E       PM      TS S  G   S  P+W+ LQETTARLLFMAVRWV+CL PFQT+S  DQLLLL+ SW  LFLLHL+QW++ WD+  LL   Q +      S   +DD+  + E+  +Q ++CRFRQ+SPD  ECGC+KA+ LF PET GL  + P+E+LQDQAQ IL DY R+RYP+QP+R GRL++ +  LR + + TVE  FF +T+G+  ++RLL DMY 
Sbjct:    1 GDRLLDILCDVCGDRSSGKHYGIYSCDGCSGFFKRSIHSNREYICKAQGAKKGRCPIDKTHRNQCRACRLAKCFEANMNKDAVQHERGPRK--------------PKPHAIISSEKQHQQQSPI--------VTQLSPH-----SATSVHSDRLRPALAPPYVLSPHRRLRCDQRFTPYP-----------------RPMALVQKPPEESPSPVPLILPHPRTTTTLYQAATTVSLAPQPPLL-----QILMSAEECQELVWNARLQPTAEY------PMEQIETETSRSPTGTVQSFSPTWEMLQETTARLLFMAVRWVRCLPPFQTISKDDQLLLLERSWTQLFLLHLAQWSVSWDITALLEDEQVR------SRLPTDDNPTNQELVLIQAIICRFRQLSPDFGECGCMKAVALFTPETVGLHAVQPIEILQDQAQRILVDYTRSRYPQQPSRIGRLMILVGYLRCVSSKTVERLFFHETIGEIPISRLLVDMYQ 437
The following BLAST results are available for this feature:
BLAST of orphan nuclear receptor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 24
Match NameE-valueIdentityDescription
EMLSAG000000077411.662e-6393.20supercontig:LSalAtl2s:LSalAtl2s450:172104:174744:-... [more]
EMLSAG000000078944.923e-4469.31supercontig:LSalAtl2s:LSalAtl2s466:351370:353021:1... [more]
EMLSAG000000099401.531e-3738.03supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-... [more]
EMLSAG000000099697.491e-3637.44supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-... [more]
EMLSAG000000114885.163e-3031.72supercontig:LSalAtl2s:LSalAtl2s794:281844:292908:-... [more]
EMLSAG000000099414.783e-2831.78supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-... [more]
EMLSAG000000019192.306e-2530.11supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1... [more]
EMLSAG000000073614.164e-2449.00supercontig:LSalAtl2s:LSalAtl2s418:374353:376789:1... [more]
EMLSAG000000072334.448e-2433.33supercontig:LSalAtl2s:LSalAtl2s405:178614:197434:1... [more]
EMLSAG000000085431.028e-2148.15supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1... [more]

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BLAST of orphan nuclear receptor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1352800265|sp|O16845.2|TLL_DROVI1.081e-7831.98RecName: Full=Protein tailless; AltName: Full=Nucl... [more]
gi|6094488|sp|Q91379.1|NR2E1_CHICK1.087e-4854.84RecName: Full=Nuclear receptor subfamily 2 group E... [more]
gi|6094490|sp|P70052.1|NR2E1_XENLA2.471e-4856.16RecName: Full=Nuclear receptor subfamily 2 group E... [more]
gi|6094489|sp|Q64104.1|NR2E1_MOUSE6.595e-4851.46RecName: Full=Nuclear receptor subfamily 2 group E... [more]
gi|9910804|sp|Q9Y466.1|NR2E1_HUMAN1.320e-4742.65RecName: Full=Nuclear receptor subfamily 2 group E... [more]
gi|9910805|sp|Q9YGL3.1|NR2E1_ORYLA2.221e-4759.42RecName: Full=Nuclear receptor subfamily 2 group E... [more]
gi|8928275|sp|Q9Y5X4.1|NR2E3_HUMAN2.298e-4745.41RecName: Full=Photoreceptor-specific nuclear recep... [more]
gi|263506139|sp|Q9TTF0.2|NR2E3_BOVIN7.326e-4645.92RecName: Full=Photoreceptor-specific nuclear recep... [more]
gi|135913|sp|P18102.1|TLL_DROME1.526e-4343.93RecName: Full=Protein tailless; AltName: Full=Nucl... [more]
gi|10720145|sp|Q9QXZ7.1|NR2E3_MOUSE2.385e-4345.59RecName: Full=Photoreceptor-specific nuclear recep... [more]

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BLAST of orphan nuclear receptor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1069703215|ref|XP_018310210.1|2.019e-13245.91PREDICTED: nuclear receptor subfamily 2 group E me... [more]
gi|795038935|ref|XP_011866111.1|2.897e-13245.60PREDICTED: nuclear receptor subfamily 2 group E me... [more]
gi|1153826632|ref|XP_020289648.1|2.951e-13244.51nuclear receptor subfamily 2 group E member 1-like... [more]
gi|780697840|ref|XP_011701242.1|1.339e-13146.09PREDICTED: nuclear receptor subfamily 2 group E me... [more]
gi|332025033|gb|EGI65220.1|1.729e-13045.58Photoreceptor-specific nuclear receptor, partial [... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1404_size42976supercontigscaffold1404_size42976:28336..30254 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1404_size42976-snap-gene-0.13-mRNA-1maker-scaffold1404_size42976-snap-gene-0.13-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1404_size42976:28336..30254-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1404_size42976-snap-gene-0.13 ID=maker-scaffold1404_size42976-snap-gene-0.13|Name=orphan nuclear receptor|organism=Tigriopus kingsejongensis|type=gene|length=1919bp|location=Sequence derived from alignment at scaffold1404_size42976:28336..30254- (Tigriopus kingsejongensis)
ATGGGAACAGGTAGGCTTCGGCACCAGAGTAGGACTTGTTTCAAACATCT
TCAGACACCAGCTCCCACACCCGACATATTTTAGGTGATCGACTCCTAGA
CATTCCATGCAAAGTGTGCGGGGATCGCAGCTCTGGCAAGCACTACGGGA
TCTACTCGTGTGATGGCTGCTCGGGTTTCTTCAAGCGAAGCATTCACCGA
AGTCGTGTGTACACCTGCAAGGCCCAGGGGGAGTTCAAAGGCCGGTGCCC
AATCGACAAGACTCATCGGAATCAGTGCCGAGCATGTCGATTGAAGAAGT
GCTTCGATTCGGCCATGAACAAAGACGGTACTGAGCACTTCAATCCATAT
GAACTGTTTCACTGATTTTTTAGTCATTGTACTATAATTTAGCCAGAATG
ACTACGCTGCCGAGCTAAATCGTTGTTCGTCTTGAGCAGTGGATTGACCA
AGCCTAGCTATTCCAATTCTAGCTGTTCAACACGAGCGAGGGCCGAGGAA
GTCCAAGCTGCAGAAAGAGCTGGCGGCCAACGGGATCACATCACCCACGA
GCCATCTGTCCGGCCGCTCTCATCACCATCATCACCACGGGCATCCGGGT
GGACCTCCCAACAGCTTCAGTGGCACCACGAAAGTGCCTCCGTTCTTCTT
CCCTACCGCTGCGGCAGCAGCCGCTGTGGCCCACCATCTGTTTCCACTGC
CGCCCCCGCCTCCACCTGTGTCTGTATCGCGTCACTTGGCCTTGGGGTCC
GCCCACTTACCCTCGCCCCCCGCCCTGTTCCATCATCACCACCATCACCA
TTCGTCCTCCGCGTCATCTTCCCCTTGCGGCAGATCCAGCGAGGGCGCAG
TCAATTCCTCCAGCGAGAGTGACGGAAAACTGCTTTCGCCCACGTCGGCC
AAGTTAACAGAAGTCAGCCGCGAATTGATCGCTCCGTCCCCGGTGATGCT
GGGCCGTGGGACGACCTCTCTCCTGTCCATCATCGCCGATCGGCACAATG
ACTTGTGGGGCGGCAAAGGGCCCTTGAGCGAGGGCCTGGCTCTACCTGCA
CCGCCCATGTTCCCCTACCCCCCACCCACGTCCCTGAGTGGCTTGAGTCC
GAGCATCGTTCCATCTTGGGACACTCTCCAGGAGACGACAGCTCGACTCC
TCTTCATGGCTGTTCGCTGGGTCAAGTGTCTGGCGCCATTTCAAACGCTC
TCGAGCAAAGATCAGGTGGGGTTGGAGGAGGAACGCTTAATGGTTTCCTG
TCATAAAACAAGTCCATTCCCTGATCTTTCAGCTCCTGCTCCTCCAAGAG
TCGTGGAAGGACCTGTTCCTGCTCCATCTCTCGCAATGGGCCATTCCGTG
GGATTTGGGACATTTGTTGTCCTCTCGTCAGACGCAGTTGATGCTGTCCT
CAGACTCGACGTTCATGTCAGATGATCATTTGGTGGACATGGAAATTAAA
ACAATGCAAGTAGGTACAACTGCAAACATGAAGACTTTTCCCGGTTCCTC
AATGTACGCCCCTGTGTGTGTGGTTCCTTTCAGGAAATGATGTGCCGTTT
TCGTCAGATTTCGCCAGATGGGACCGAGTGTGGATGTCTCAAGGCCATTG
TGCTATTTAAACCAGGTCCGGTCTTGGTCGCAAGCAATTATTTATAAGTC
CTCCAAGAAGTAACGCATCTGCTCTCTCTTTAGAAACCACTGGCTTGACC
GATCTGCATCCAGTGGAGATGCTCCAGGATCAGGCTCAATGCATCTTGAA
CGACTATGTTCGCAACCGATATCCTCGTCAGCCCACTCGATTTGGTCGGC
TCCTTTTGGCCATTCCTCTCCTCCGGATGATCCGAACTTCCACTGTGGAA
AATTTCTTCTTCCGAGACACAGTGGGCGACACATCCATGAATCGCTTGTT
GCAAGACATGTACAATGCC
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Synonyms
The feature 'orphan nuclear receptor' has the following synonyms
Synonym
Tk06750
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